View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21040_high_11 (Length: 351)
Name: NF21040_high_11
Description: NF21040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21040_high_11 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 333; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 15 - 351
Target Start/End: Original strand, 15419978 - 15420314
Alignment:
| Q |
15 |
aacctgtgttcaaagataagttaattattataagtaatacataattttgttatgaaaaccatgtactaatctttgaatcaatgtttgaacttatgtggtc |
114 |
Q |
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| T |
15419978 |
aacctgtgttcaaagataagttaattattataagtaatacataattttgttatgaaaaccatgtattaatctttgaatcaatgtttgaacttatgtggtc |
15420077 |
T |
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| Q |
115 |
gccaacaaatgtagcagctaaaatgttacaagtagtgcataccaacaattcaaaacttcaaatgtttatagtaaaatgactataacatcatgtttaatta |
214 |
Q |
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| T |
15420078 |
gccaacaaatgtagcagctaaaatgttacaagtagtgcataccaacaattcaaaacttcaaatgtttatagtaaaatgactataacatcatgtttaatta |
15420177 |
T |
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| Q |
215 |
agatcattatgaaatctcacaaatgactatcagagaccgtcgtaagatgactatcaacgtcattttaattattaatagtttctcctaaccaaaacaaaaa |
314 |
Q |
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| T |
15420178 |
agatcattatgaaatctcacaaatgactatcagagaccgtcgtaagatgactatcaacgtcattttaattattaatagtttctcctaaccaaaacaaaaa |
15420277 |
T |
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| Q |
315 |
atgttgaaataagatcattatgaaatctcagaaatga |
351 |
Q |
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| T |
15420278 |
atgttgaaataagatcattatgaaatctcagaaatga |
15420314 |
T |
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