View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21040_high_24 (Length: 226)

Name: NF21040_high_24
Description: NF21040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21040_high_24
NF21040_high_24
[»] chr6 (29 HSPs)
chr6 (6-65)||(15163102-15163161)
chr6 (174-226)||(6936664-6936714)
chr6 (172-226)||(5443300-5443352)
chr6 (172-226)||(11523086-11523138)
chr6 (172-226)||(14873308-14873360)
chr6 (179-226)||(28494630-28494677)
chr6 (179-226)||(29807039-29807086)
chr6 (172-226)||(34709516-34709568)
chr6 (174-226)||(7127411-7127461)
chr6 (174-226)||(12025932-12025982)
chr6 (174-226)||(25576954-25577004)
chr6 (174-210)||(2091991-2092027)
chr6 (175-226)||(10702553-10702602)
chr6 (174-210)||(32522240-32522276)
chr6 (174-210)||(33950520-33950556)
chr6 (175-210)||(14313595-14313630)
chr6 (172-226)||(25528019-25528071)
chr6 (175-210)||(32003589-32003624)
chr6 (175-210)||(34250341-34250376)
chr6 (174-226)||(2523072-2523122)
chr6 (174-226)||(2655338-2655388)
chr6 (174-226)||(3767479-3767529)
chr6 (174-222)||(5916470-5916516)
chr6 (174-226)||(9241149-9241199)
chr6 (174-226)||(34280431-34280481)
chr6 (174-210)||(4100826-4100862)
chr6 (174-210)||(4126189-4126225)
chr6 (174-210)||(15499130-15499166)
chr6 (174-210)||(32131222-32131258)
[»] chr3 (37 HSPs)
chr3 (172-226)||(4558324-4558376)
chr3 (174-226)||(48223872-48223924)
chr3 (172-226)||(23309351-23309403)
chr3 (172-226)||(45241575-45241627)
chr3 (172-226)||(1262801-1262855)
chr3 (174-226)||(20030198-20030247)
chr3 (174-226)||(4757286-4757336)
chr3 (174-210)||(11388807-11388843)
chr3 (174-210)||(17764623-17764659)
chr3 (174-210)||(18365037-18365073)
chr3 (174-210)||(19065943-19065979)
chr3 (174-210)||(27638783-27638819)
chr3 (174-210)||(44950716-44950752)
chr3 (174-210)||(47794286-47794322)
chr3 (174-210)||(49080364-49080400)
chr3 (174-210)||(53490334-53490370)
chr3 (172-226)||(30604966-30605018)
chr3 (172-226)||(54606152-54606204)
chr3 (172-210)||(1763936-1763974)
chr3 (172-210)||(22129993-22130031)
chr3 (173-226)||(32221891-32221942)
chr3 (174-226)||(10888003-10888053)
chr3 (174-226)||(11397400-11397450)
chr3 (174-226)||(14600762-14600812)
chr3 (174-226)||(14601842-14601892)
chr3 (174-226)||(24542716-24542766)
chr3 (174-226)||(27346312-27346362)
chr3 (174-226)||(27393379-27393429)
chr3 (174-226)||(27397255-27397305)
chr3 (174-222)||(30128002-30128048)
chr3 (174-226)||(37183370-37183420)
chr3 (174-226)||(40927784-40927834)
chr3 (174-226)||(41586932-41586982)
chr3 (174-226)||(41865393-41865443)
chr3 (174-210)||(3090052-3090088)
chr3 (174-210)||(25259671-25259707)
chr3 (174-210)||(32255456-32255492)
[»] chr7 (36 HSPs)
chr7 (172-226)||(19332669-19332723)
chr7 (172-226)||(2146327-2146379)
chr7 (174-226)||(6184941-6184991)
chr7 (174-226)||(26200100-26200150)
chr7 (174-210)||(13068040-13068076)
chr7 (174-210)||(13904170-13904206)
chr7 (174-226)||(19435027-19435078)
chr7 (174-210)||(38988163-38988199)
chr7 (174-210)||(43450404-43450440)
chr7 (174-210)||(46010752-46010788)
chr7 (174-210)||(48872415-48872451)
chr7 (172-226)||(25549-25601)
chr7 (172-226)||(317569-317621)
chr7 (175-210)||(8535205-8535240)
chr7 (175-210)||(22712040-22712075)
chr7 (172-226)||(29823620-29823672)
chr7 (172-226)||(40401193-40401245)
chr7 (172-210)||(3341080-3341118)
chr7 (172-226)||(11640709-11640763)
chr7 (168-210)||(29615946-29615988)
chr7 (174-226)||(1573374-1573424)
chr7 (174-226)||(20261295-20261345)
chr7 (174-207)||(23226742-23226775)
chr7 (174-207)||(23235895-23235928)
chr7 (174-226)||(23742396-23742446)
chr7 (174-226)||(25607345-25607395)
chr7 (174-226)||(27144475-27144525)
chr7 (174-226)||(31221081-31221131)
chr7 (174-226)||(32867635-32867685)
chr7 (174-226)||(34835212-34835262)
chr7 (174-226)||(38670415-38670465)
chr7 (174-210)||(19155737-19155773)
chr7 (174-210)||(20755136-20755172)
chr7 (174-210)||(42813302-42813338)
chr7 (174-210)||(46208609-46208645)
chr7 (174-206)||(48982277-48982309)
[»] chr4 (37 HSPs)
chr4 (168-210)||(37735251-37735293)
chr4 (174-226)||(38720236-38720286)
chr4 (174-226)||(48372819-48372869)
chr4 (172-226)||(615865-615917)
chr4 (172-226)||(6232835-6232887)
chr4 (172-226)||(7165809-7165861)
chr4 (172-226)||(13395479-13395531)
chr4 (172-226)||(46095696-46095748)
chr4 (174-223)||(26618933-26618980)
chr4 (174-226)||(8138725-8138775)
chr4 (174-226)||(17729801-17729851)
chr4 (174-226)||(29979447-29979497)
chr4 (174-222)||(36897750-36897796)
chr4 (174-226)||(49702663-49702713)
chr4 (174-210)||(4950339-4950375)
chr4 (174-210)||(30192810-30192846)
chr4 (174-210)||(42074171-42074207)
chr4 (174-210)||(49621086-49621122)
chr4 (175-210)||(7797248-7797283)
chr4 (175-210)||(25009691-25009726)
chr4 (176-210)||(37424081-37424115)
chr4 (173-207)||(50264785-50264819)
chr4 (175-216)||(13772012-13772053)
chr4 (174-226)||(17723041-17723091)
chr4 (174-226)||(19313750-19313800)
chr4 (174-226)||(23309089-23309139)
chr4 (174-226)||(33032449-33032499)
chr4 (174-226)||(44664915-44664965)
chr4 (174-222)||(46076714-46076760)
chr4 (174-226)||(46490308-46490358)
chr4 (174-226)||(55069248-55069298)
chr4 (174-226)||(56309817-56309867)
chr4 (174-210)||(4964301-4964337)
chr4 (174-210)||(10155807-10155843)
chr4 (174-210)||(17201701-17201737)
chr4 (174-226)||(23721667-23721719)
chr4 (174-210)||(45847439-45847475)
[»] scaffold0695 (1 HSPs)
scaffold0695 (174-226)||(2624-2674)
[»] chr8 (31 HSPs)
chr8 (174-226)||(14093771-14093821)
chr8 (172-226)||(8297535-8297587)
chr8 (172-226)||(14364069-14364121)
chr8 (168-226)||(41311964-41312021)
chr8 (174-226)||(3075600-3075650)
chr8 (174-226)||(6292805-6292855)
chr8 (174-226)||(10215870-10215920)
chr8 (174-226)||(10674553-10674603)
chr8 (174-226)||(14277430-14277480)
chr8 (174-226)||(31846738-31846788)
chr8 (174-226)||(41262475-41262525)
chr8 (174-210)||(17496667-17496703)
chr8 (174-210)||(37265779-37265815)
chr8 (174-210)||(37837313-37837349)
chr8 (174-210)||(39998671-39998707)
chr8 (174-210)||(42166427-42166463)
chr8 (172-226)||(8627784-8627836)
chr8 (175-210)||(14879926-14879961)
chr8 (172-226)||(43776581-43776633)
chr8 (174-223)||(8438189-8438236)
chr8 (172-226)||(11759684-11759738)
chr8 (172-210)||(40299221-40299259)
chr8 (174-226)||(17565073-17565123)
chr8 (174-226)||(31739777-31739827)
chr8 (174-226)||(32905066-32905116)
chr8 (178-226)||(44147365-44147411)
chr8 (175-226)||(17734532-17734581)
chr8 (172-223)||(24809991-24810040)
chr8 (174-225)||(30354169-30354218)
chr8 (174-210)||(37304629-37304665)
chr8 (174-210)||(44746581-44746617)
[»] chr1 (37 HSPs)
chr1 (174-226)||(15357223-15357273)
chr1 (174-226)||(19997893-19997943)
chr1 (174-226)||(28971235-28971285)
chr1 (174-226)||(44645668-44645718)
chr1 (174-226)||(47291859-47291909)
chr1 (174-226)||(47553426-47553476)
chr1 (172-226)||(1846150-1846202)
chr1 (172-226)||(25068738-25068790)
chr1 (172-226)||(38011584-38011636)
chr1 (172-226)||(41321802-41321854)
chr1 (172-210)||(29344797-29344835)
chr1 (174-226)||(51764588-51764637)
chr1 (174-226)||(1386381-1386431)
chr1 (174-226)||(7842058-7842108)
chr1 (174-226)||(23739549-23739599)
chr1 (174-226)||(25991153-25991203)
chr1 (174-226)||(44649024-44649074)
chr1 (174-226)||(45559384-45559434)
chr1 (174-226)||(47216460-47216510)
chr1 (174-210)||(794481-794517)
chr1 (174-210)||(4007943-4007979)
chr1 (174-225)||(28044883-28044932)
chr1 (174-210)||(37419208-37419244)
chr1 (174-210)||(46682978-46683014)
chr1 (175-210)||(36605132-36605167)
chr1 (175-210)||(45738404-45738439)
chr1 (172-226)||(52505583-52505635)
chr1 (174-223)||(18406936-18406983)
chr1 (177-226)||(31765741-31765788)
chr1 (174-226)||(9091380-9091430)
chr1 (174-226)||(24064816-24064866)
chr1 (174-226)||(27226078-27226128)
chr1 (174-226)||(29510216-29510266)
chr1 (178-226)||(41575026-41575072)
chr1 (174-210)||(2275493-2275529)
chr1 (175-207)||(42830839-42830871)
chr1 (174-210)||(50143789-50143825)
[»] scaffold0004 (1 HSPs)
scaffold0004 (175-226)||(351674-351723)
[»] chr5 (34 HSPs)
chr5 (175-226)||(18337805-18337854)
chr5 (172-226)||(4055017-4055069)
chr5 (172-226)||(20691528-20691580)
chr5 (172-226)||(37657807-37657859)
chr5 (172-210)||(35751816-35751854)
chr5 (174-226)||(141048-141098)
chr5 (174-226)||(4877113-4877163)
chr5 (174-226)||(20540590-20540640)
chr5 (174-226)||(30783000-30783050)
chr5 (174-226)||(30920798-30920848)
chr5 (174-226)||(35751385-35751435)
chr5 (174-211)||(36853926-36853963)
chr5 (174-210)||(5138598-5138634)
chr5 (175-226)||(10687995-10688044)
chr5 (174-210)||(13686374-13686410)
chr5 (174-210)||(14594479-14594515)
chr5 (174-210)||(17780753-17780789)
chr5 (174-210)||(19408839-19408875)
chr5 (175-226)||(22730678-22730727)
chr5 (172-207)||(9017950-9017985)
chr5 (172-226)||(24625228-24625280)
chr5 (172-226)||(37334319-37334371)
chr5 (174-208)||(6136035-6136069)
chr5 (174-226)||(1198851-1198901)
chr5 (174-226)||(1931566-1931616)
chr5 (174-226)||(8438143-8438193)
chr5 (175-208)||(20183668-20183701)
chr5 (174-226)||(36737065-36737115)
chr5 (174-226)||(36762519-36762569)
chr5 (174-210)||(8572982-8573018)
chr5 (174-210)||(15144711-15144747)
chr5 (174-210)||(17968117-17968153)
chr5 (174-210)||(18524097-18524133)
chr5 (174-210)||(20259639-20259675)
[»] chr2 (37 HSPs)
chr2 (174-210)||(37199233-37199269)
chr2 (172-210)||(37009294-37009332)
chr2 (174-226)||(3515091-3515141)
chr2 (174-226)||(4437599-4437649)
chr2 (174-226)||(5113892-5113942)
chr2 (174-226)||(38972754-38972804)
chr2 (174-210)||(6229517-6229553)
chr2 (174-210)||(11796444-11796480)
chr2 (174-210)||(13873620-13873656)
chr2 (174-210)||(14013745-14013781)
chr2 (174-210)||(26197106-26197142)
chr2 (174-210)||(33146438-33146474)
chr2 (174-210)||(40769003-40769039)
chr2 (175-210)||(3045232-3045267)
chr2 (175-210)||(7939733-7939768)
chr2 (175-210)||(11564102-11564137)
chr2 (172-226)||(16110897-16110949)
chr2 (172-226)||(20894011-20894063)
chr2 (176-215)||(24758408-24758447)
chr2 (172-226)||(42791769-42791821)
chr2 (172-226)||(43657200-43657252)
chr2 (172-210)||(10356865-10356903)
chr2 (174-208)||(22606618-22606652)
chr2 (168-210)||(36451363-36451405)
chr2 (174-226)||(64595-64645)
chr2 (174-226)||(8314053-8314103)
chr2 (174-226)||(22297872-22297922)
chr2 (174-207)||(24387303-24387336)
chr2 (174-226)||(35899428-35899478)
chr2 (174-210)||(552242-552278)
chr2 (176-226)||(6077779-6077828)
chr2 (175-226)||(11564705-11564754)
chr2 (174-210)||(15006729-15006765)
chr2 (174-210)||(18468077-18468113)
chr2 (174-210)||(31364179-31364215)
chr2 (174-210)||(34173347-34173383)
chr2 (174-210)||(34247798-34247834)
[»] scaffold2113 (1 HSPs)
scaffold2113 (172-226)||(1016-1068)
[»] scaffold0105 (1 HSPs)
scaffold0105 (172-226)||(19377-19429)
[»] scaffold0361 (1 HSPs)
scaffold0361 (174-226)||(16768-16818)
[»] scaffold0340 (1 HSPs)
scaffold0340 (172-226)||(12594-12645)
[»] scaffold0201 (1 HSPs)
scaffold0201 (174-210)||(14992-15028)
[»] scaffold0102 (1 HSPs)
scaffold0102 (174-210)||(26757-26793)
[»] scaffold0289 (1 HSPs)
scaffold0289 (175-210)||(3679-3714)
[»] scaffold0971 (1 HSPs)
scaffold0971 (174-226)||(3505-3555)
[»] scaffold0023 (1 HSPs)
scaffold0023 (174-226)||(90621-90671)
[»] scaffold1192 (1 HSPs)
scaffold1192 (174-210)||(460-496)
[»] scaffold0712 (1 HSPs)
scaffold0712 (174-210)||(3951-3987)
[»] scaffold0709 (1 HSPs)
scaffold0709 (174-210)||(3971-4007)
[»] scaffold0368 (1 HSPs)
scaffold0368 (175-207)||(10895-10927)
[»] scaffold0189 (1 HSPs)
scaffold0189 (174-210)||(11692-11728)
[»] scaffold0115 (1 HSPs)
scaffold0115 (175-226)||(31091-31140)
[»] scaffold0036 (1 HSPs)
scaffold0036 (175-226)||(25622-25671)


Alignment Details
Target: chr6 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 15163161 - 15163102
Alignment:
Q  6 acgagtaagatcagtcggagtttgaaagaaaaaatcatagaaaccacgtccgagagggac 65  Q
    |||||||||||||| ||| ||  ||||||||||||||||||||||||||| |||||||||    
T  15163161 acgagtaagatcagccggggtgcgaaagaaaaaatcatagaaaccacgtcagagagggac 15163102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 6936714 - 6936664
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  6936714 gtttaaaactacatgttaatgaaattatgaataaaa--aatagcgaaaaatat 6936664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 5443352 - 5443300
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  5443352 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 5443300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 11523138 - 11523086
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  11523138 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 11523086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 14873360 - 14873308
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  14873360 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 14873308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 28494630 - 28494677
Alignment:
Q  179 aaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||| |||||||||| |||||||||| |||||||||||||||    
T  28494630 aaactatatgctaatgaaattgtgaataaaaaaaatagcgaaaaatat 28494677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 29807039 - 29807086
Alignment:
Q  179 aaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||| |||||||||| |||||||||| |||||||||||||||    
T  29807039 aaactatatgctaatgaaattgtgaataaaaaaaatagcgaaaaatat 29807086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 34709568 - 34709516
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  34709568 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 34709516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 7127411 - 7127461
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  7127411 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 7127461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 12025932 - 12025982
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  12025932 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 12025982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 25576954 - 25577004
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  25576954 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 25577004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 2092027 - 2091991
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  2092027 gtttaaaactatatgttaatgaaattgtgaataaaaa 2091991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 10702602 - 10702553
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  10702602 tttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 10702553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 32522240 - 32522276
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  32522240 gtttaaaactatatgttaatgaaattgtgaataaaaa 32522276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 33950556 - 33950520
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  33950556 gtttaaaactatatgttaatgaaattgtgaataaaaa 33950520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 14313595 - 14313630
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||||||||||||||||| ||||||||||    
T  14313595 tttaaaactatatgttaatgaaattgtgaataaaaa 14313630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 25528071 - 25528019
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||   ||||||||||||||    
T  25528071 gagtttaaaactacatgttaatgaaattgtgaataaaa--tatagcgaaaaatat 25528019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 32003589 - 32003624
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||||||||||||||||| ||||||||||    
T  32003589 tttaaaactatatgttaatgaaattgtgaataaaaa 32003624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 34250376 - 34250341
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||||||||||||||||| ||||||||||    
T  34250376 tttaaaactatatgttaatgaaattgtgaataaaaa 34250341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 2523072 - 2523122
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||| ||||| |||||||||  |||||||||||||||    
T  2523072 gtttaaaactacatgttaataaaattgtgaataaaa--aatagcgaaaaatat 2523122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 2655338 - 2655388
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||||||| | |||||||||  |||| ||||||||||    
T  2655338 gtttaaaactatatgttaatgaaactgtgaataaaa--aataacgaaaaatat 2655388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 3767479 - 3767529
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  ||||| |||||||||    
T  3767479 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagagaaaaatat 3767529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 5916470 - 5916516
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaa 222  Q
    ||||||||||||||||||||| |||| |||||||||  |||||||||||    
T  5916470 gtttaaaactatatgttaatggaattgtgaataaaa--aatagcgaaaa 5916516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 9241199 - 9241149
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||| ||||||||    
T  9241199 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcaaaaaatat 9241149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 34280431 - 34280481
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| | |||||||  |||||||||||||||    
T  34280431 gtttaaaactacatgttaatgaaattgtaaataaaa--aatagcgaaaaatat 34280481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 4100862 - 4100826
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  4100862 gtttaaaactacatgttaatgaaattgtgaataaaaa 4100826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 4126225 - 4126189
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  4126225 gtttaaaactacatgttaatgaaattgtgaataaaaa 4126189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 15499166 - 15499130
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  15499166 gtttaaaactatatattaatgaaattgtgaataaaaa 15499130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 32131258 - 32131222
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  32131258 gtttaaaactacatgttaatgaaattgtgaataaaaa 32131222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 4558376 - 4558324
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  4558376 gagtttaaaactacatgttaatgaaattatgaataaaa--aatagcgaaaaatat 4558324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 48223872 - 48223924
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||| |||||||||| |||||| |||||||||| |||||||||||||||    
T  48223872 gtttaaaaatatatgttaacgaaattgtgaataaaaaaaatagcgaaaaatat 48223924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 23309351 - 23309403
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  23309351 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 23309403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 45241575 - 45241627
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  45241575 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 45241627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 1262801 - 1262855
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||| |||| ||||    
T  1262801 gagtttaaaactatatgttaatgagattgtgaataaaaaaaatagagaaagatat 1262855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 20030247 - 20030198
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||||||||| ||||||||   |||||||||||||||    
T  20030247 gtttaaaactatatgttaatgaaattgtgaataaa---aatagcgaaaaatat 20030198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 4757336 - 4757286
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  4757336 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 4757286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 11388807 - 11388843
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||| |||||||||||||||||||||||||    
T  11388807 gtttaaaactacatgttaatgaaattatgaataaaaa 11388843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 17764659 - 17764623
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  17764659 gtttaaaactatatgttaatgaaattgtgaataaaaa 17764623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 18365037 - 18365073
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  18365037 gtttaaaactatatgttaatgaaattgtgaataaaaa 18365073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 19065979 - 19065943
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  19065979 gtttaaaactatatgttaatgaaattgtgaataaaaa 19065943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 27638819 - 27638783
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  27638819 gtttaaaactatatgttaatgaaattgtgaataaaaa 27638783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 44950716 - 44950752
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  44950716 gtttaaaactatatgttaatgaaattgtgaataaaaa 44950752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 47794322 - 47794286
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  47794322 gtttaaaactatatgttaatgaaattgtgaataaaaa 47794286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 49080364 - 49080400
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  49080364 gtttaaaactatatgttaatgaaattgtgaataaaaa 49080400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 53490370 - 53490334
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  53490370 gtttaaaactatatgttaatgaaattgtgaataaaaa 53490334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 30605018 - 30604966
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||||||||||||| |||| |||||||||  |||||| ||||||||    
T  30605018 gagtttaaaactatatgttaatggaattgtgaataaaa--aatagcaaaaaatat 30604966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 54606152 - 54606204
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| ||| |||||||||| |||||||||  |||||||||||||||    
T  54606152 gagtttaaaactacatgctaatgaaattgtgaataaaa--aatagcgaaaaatat 54606204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 1763974 - 1763936
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  1763974 gagtttaaaagtatatgttaatgaaattgtgaataaaaa 1763936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 22130031 - 22129993
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||||| |||||||||||||| ||||||||||    
T  22130031 gagtttaaaactacatgttaatgaaattgtgaataaaaa 22129993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 32221942 - 32221891
Alignment:
Q  173 agtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||| ||||||||||||| ||||| |||||||||  |||||||||||||||    
T  32221942 agtttaagactatatgttaataaaattgtgaataaaa--aatagcgaaaaatat 32221891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 10888053 - 10888003
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| ||||||||||||||  ||||||||  |||||||||||||||    
T  10888053 gtttaaaactacatgttaatgaaattgggaataaaa--aatagcgaaaaatat 10888003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 11397400 - 11397450
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||||| |||||||  | |||||||||||||    
T  11397400 gtttaaaactacatgttaatgaaattattaataaaa--agtagcgaaaaatat 11397450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 14600762 - 14600812
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| | |||||||||||| |||||||||  |||||||||||||||    
T  14600762 gtttaaaactagaagttaatgaaattgtgaataaaa--aatagcgaaaaatat 14600812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 14601842 - 14601892
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||| ||||||||||    
T  14601842 gtttaaaactacatgttaatgaaattgtgaataaaa--aataacgaaaaatat 14601892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 24542716 - 24542766
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||| ||| |||||||||||||| |||||||||  |||||||||||||||    
T  24542716 gtttaaagctacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 24542766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 27346362 - 27346312
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||| ||||||||    
T  27346362 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcaaaaaatat 27346312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 27393429 - 27393379
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  ||||| |||||||||    
T  27393429 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagtgaaaaatat 27393379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 27397255 - 27397305
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||| |||  ||||||||||    
T  27397255 gtttaaaactacatgttaatgaaattttgaataaaaaaaat--cgaaaaatat 27397305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 30128002 - 30128048
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaa 222  Q
    |||||||||||||||||||||||||| | |||||||  |||||||||||    
T  30128002 gtttaaaactatatgttaatgaaattgtaaataaaa--aatagcgaaaa 30128048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 37183420 - 37183370
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||| || |||||||||||||| |||||||||  |||||||||||||||    
T  37183420 gtttaaaaatacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 37183370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 40927834 - 40927784
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||| ||||||||||||| |||||||||  |||| ||||||||||    
T  40927834 gtttaaaactatttgttaatgaaattgtgaataaaa--aataacgaaaaatat 40927784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 41586982 - 41586932
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| | |||||||  |||||||||||||||    
T  41586982 gtttaaaactacatgttaatgaaattgttaataaaa--aatagcgaaaaatat 41586932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 41865393 - 41865443
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  ||||| |||||||||    
T  41865393 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagtgaaaaatat 41865443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 3090088 - 3090052
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  3090088 gtttaaaactatatgctaatgaaattgtgaataaaaa 3090052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 25259671 - 25259707
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  25259671 gtttaaaattatatgttaatgaaattgtgaataaaaa 25259707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 32255456 - 32255492
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  32255456 gtttaaaactacatgttaatgaaattgtgaataaaaa 32255492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 19332723 - 19332669
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||| |||||||||    
T  19332723 gagtttaaaactatatgttaatgagattgtgaataaaaaaaatagagaaaaatat 19332669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 2146379 - 2146327
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  2146379 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 2146327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 6184991 - 6184941
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  6184991 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 6184941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 26200150 - 26200100
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  26200150 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 26200100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 13068076 - 13068040
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  13068076 gtttaaaactatatgttaatgaaattgtgaataaaaa 13068040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 13904170 - 13904206
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  13904170 gtttaaaactatatgttaatgaaattgtgaataaaaa 13904206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 19435027 - 19435078
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||| ||||| |||||||||| |||||||||||||||    
T  19435027 gtttaaaactacatgttaataaaattgtgaataaaaa-aatagcgaaaaatat 19435078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 38988163 - 38988199
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  38988163 gtttaaaactatatgttaatgaaattgtgaataaaaa 38988199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 43450440 - 43450404
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  43450440 gtttaaaactatatgttaatgaaattgtgaataaaaa 43450404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 46010788 - 46010752
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  46010788 gtttaaaactatatgttaatgaaattgtgaataaaaa 46010752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 48872415 - 48872451
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  48872415 gtttaaaactatatgttaatgaaattgtgaataaaaa 48872451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 25601 - 25549
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||| || |||||||||||||| |||||||||  |||||||||||||||    
T  25601 gagtttaaaagtacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 25549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 317621 - 317569
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| ||||| |||  |||||||||||||||    
T  317621 gagtttaaaactacatgttaatgaaattgtgaatgaaa--aatagcgaaaaatat 317569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 8535205 - 8535240
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||||||||||||||||| ||||||||||    
T  8535205 tttaaaactatatgttaatgaaattgtgaataaaaa 8535240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 22712040 - 22712075
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||||||||||||||||| ||||||||||    
T  22712040 tttaaaactatatgttaatgaaattgtgaataaaaa 22712075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 29823672 - 29823620
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||| ||||||||    
T  29823672 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcaaaaaatat 29823620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 40401245 - 40401193
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| | |||||||  |||||||||||||||    
T  40401245 gagtttaaaactacatgttaatgaaattgtaaataaaa--aatagcgaaaaatat 40401193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 3341118 - 3341080
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  3341118 gagtttaaaactatatgttaatgaaattgtgaaaaaaaa 3341080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 11640709 - 11640763
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||| ||||||||||||| ||| |||||||||| ||||| |||| ||||    
T  11640709 gagtttaaaattatatgttaatgagattgtgaataaaaaaaatagagaaagatat 11640763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 29615946 - 29615988
Alignment:
Q  168 aattgagtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||    
T  29615946 aattgagtttaaaactacatgtcaatgaaattgtgaataaaaa 29615988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 1573424 - 1573374
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||| ||||||||||    
T  1573424 gtttaaaactacatgttaatgaaattgtgaataaaa--aataacgaaaaatat 1573374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 20261345 - 20261295
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| | |||||||||||| |||||||||  |||||||||||||||    
T  20261345 gtttaaaactacaagttaatgaaattgtgaataaaa--aatagcgaaaaatat 20261295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 23226742 - 23226775
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataa 207  Q
    ||||||||||||||| ||||||||||||||||||    
T  23226742 gtttaaaactatatgataatgaaattatgaataa 23226775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 23235895 - 23235928
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataa 207  Q
    ||||||||||||||| ||||||||||||||||||    
T  23235895 gtttaaaactatatgataatgaaattatgaataa 23235928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 23742396 - 23742446
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| ||||| |||||||| |||||||||  |||||||||||||||    
T  23742396 gtttaaaactacatgttcatgaaattgtgaataaaa--aatagcgaaaaatat 23742446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 25607345 - 25607395
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||| ||||||||    
T  25607345 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcaaaaaatat 25607395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 27144525 - 27144475
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  ||||| |||||||||    
T  27144525 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagagaaaaatat 27144475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 31221131 - 31221081
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||  ||| |||||||||||||||    
T  31221131 gtttaaaactacatgttaatgaaattgtgaat--aaagaatagcgaaaaatat 31221081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 32867635 - 32867685
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||  ||||||||||||| |||||||||  |||||||||||||||    
T  32867635 gtttaaaactacgtgttaatgaaattgtgaataaaa--aatagcgaaaaatat 32867685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 34835212 - 34835262
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||| ||||||||||||||||| ||||| |||  |||||||||||||||    
T  34835212 gtttaaaattatatgttaatgaaattgtgaatcaaa--aatagcgaaaaatat 34835262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 38670415 - 38670465
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||  ||| |||||||||||||||    
T  38670415 gtttaaaactacatgttaatgaaattgtgaat--aaataatagcgaaaaatat 38670465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 19155737 - 19155773
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  19155737 gtttaaaattatatgttaatgaaattgtgaataaaaa 19155773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 20755136 - 20755172
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  20755136 gtttaaaattatatgttaatgaaattgtgaataaaaa 20755172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 42813302 - 42813338
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  42813302 gtttaaaactatatgttaatgagattgtgaataaaaa 42813338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 46208609 - 46208645
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  46208609 gtttaaaactatatgttaataaaattgtgaataaaaa 46208645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 48982277 - 48982309
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaata 206  Q
    |||||||||||||||||||||||||| ||||||    
T  48982277 gtttaaaactatatgttaatgaaattttgaata 48982309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 37735251 - 37735293
Alignment:
Q  168 aattgagtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  37735251 aattgagtttaaaactatatgttaatgaaattgtgaataaaaa 37735293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 38720286 - 38720236
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||||||    
T  38720286 gtttaaaactatatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 38720236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 48372819 - 48372869
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||||||    
T  48372819 gtttaaaactatatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 48372869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 615865 - 615917
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  615865 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 615917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 6232835 - 6232887
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  6232835 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 6232887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 7165809 - 7165861
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  7165809 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 7165861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 13395531 - 13395479
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  13395531 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 13395479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 46095748 - 46095696
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  46095748 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 46095696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 26618933 - 26618980
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaa 223  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||    
T  26618933 gtttaaaactacatgttaatgaaattatgaataaaa--aatagcgaaaaa 26618980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 8138725 - 8138775
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||||||||||    
T  8138725 gtttaaaactatatgttaataaaattgtgaataaaa--aatagcgaaaaatat 8138775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 17729851 - 17729801
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  17729851 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 17729801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 29979447 - 29979497
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||| ||||||||||||||||| |||||||||  |||||||||||||||    
T  29979447 gtttaaaaatatatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 29979497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 36897796 - 36897750
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaa 222  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||    
T  36897796 gtttaaaactatatgttaatgaaattgtgaataaaa--aatagcgaaaa 36897750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 49702713 - 49702663
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  49702713 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 49702663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 4950339 - 4950375
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  4950339 gtttaaaactatatgttaatgaaattgtgaataaaaa 4950375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 30192846 - 30192810
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  30192846 gtttaaaactatatgttaatgaaattctgaataaaaa 30192810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 42074171 - 42074207
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||| ||||||||||||||||||||||    
T  42074171 gtttaaaactatatattaatgaaattatgaataaaaa 42074207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 49621086 - 49621122
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  49621086 gtttaaaactatatgttaatgaaattgtgaataaaaa 49621122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 7797283 - 7797248
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||||||||||||||||| ||||||||||    
T  7797283 tttaaaactatatgttaatgaaattgtgaataaaaa 7797248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 25009726 - 25009691
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||||||||||||||||| ||||||||||    
T  25009726 tttaaaactatatgttaatgaaattgtgaataaaaa 25009691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 37424115 - 37424081
Alignment:
Q  176 ttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||| ||||||||||    
T  37424115 ttaaaactatatgttaatgaaattgtgaataaaaa 37424081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 50264785 - 50264819
Alignment:
Q  173 agtttaaaactatatgttaatgaaattatgaataa 207  Q
    ||||||||||||||||||||||||||| |||||||    
T  50264785 agtttaaaactatatgttaatgaaattgtgaataa 50264819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 13772053 - 13772012
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaacaatag 216  Q
    ||||||||||||| ||||||||||| |||||||||| |||||    
T  13772053 tttaaaactatatattaatgaaattgtgaataaaaaaaatag 13772012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 17723091 - 17723041
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||| |||| |||||||||||||||| |||||||  |||||||||||||||    
T  17723091 gtttaacactacatgttaatgaaattattaataaaa--aatagcgaaaaatat 17723041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 19313750 - 19313800
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||| ||||||||| |||||||||  |||||||||||||||    
T  19313750 gtttaaaactacatgtcaatgaaattgtgaataaaa--aatagcgaaaaatat 19313800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 23309139 - 23309089
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| | |||||||||||| |||||||||  |||||||||||||||    
T  23309139 gtttaaaactacaagttaatgaaattgtgaataaaa--aatagcgaaaaatat 23309089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 33032499 - 33032449
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||| ||||||||| |||||||||  |||||||||||||||    
T  33032499 gtttaaaactacatgtcaatgaaattgtgaataaaa--aatagcgaaaaatat 33032449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 44664915 - 44664965
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| || |||||||||||||||||||||  |||||| ||||||||    
T  44664915 gtttaaaactacatattaatgaaattatgaataaaa--aatagcaaaaaatat 44664965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 46076714 - 46076760
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaa 222  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||||||    
T  46076714 gtttaaaactatatgttaataaaattgtgaataaaa--aatagcgaaaa 46076760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 46490358 - 46490308
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  ||||| |||||||||    
T  46490358 gtttaaaactagatgttaatgaaattgtgaataaaa--aatagagaaaaatat 46490308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 55069248 - 55069298
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||| || |||||||||||||| |||||||||  |||||||||||||||    
T  55069248 gtttaaaattacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 55069298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 56309817 - 56309867
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||  |||||||||||||||||  |||||||||||||||    
T  56309817 gtttaaaactacatgttgttgaaattatgaataaaa--aatagcgaaaaatat 56309867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 4964301 - 4964337
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  4964301 gtttaaaactatatgttaatgaaattgtgaattaaaa 4964337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 10155843 - 10155807
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  10155843 gtttaaaactacatgttaatgaaattgtgaataaaaa 10155807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 17201701 - 17201737
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  17201701 gtttaaaactatacgttaatgaaattgtgaataaaaa 17201737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 23721719 - 23721667
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||| ||||| || ||| ||||||||    
T  23721719 gtttaaaactacatgttaatgaaattgtgaagaaaaaaaaaagcaaaaaatat 23721667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 45847475 - 45847439
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  45847475 gtttaaaactacatgttaatgaaattgtgaataaaaa 45847439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 2624 - 2674
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||||||    
T  2624 gtttaaaactatatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 2674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 14093821 - 14093771
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||||||    
T  14093821 gtttaaaactatatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 14093771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 8297535 - 8297587
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  8297535 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 8297587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 14364121 - 14364069
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  14364121 gagtttaaaactacatgttaatgaaattttgaataaaa--aatagcgaaaaatat 14364069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 41312021 - 41311964
Alignment:
Q  168 aattgagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||| ||| |||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  41312021 aattgggttcaaaactatatgttaatgaaattgtgaataaaaa-aatagcaaaaaatat 41311964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 3075650 - 3075600
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  3075650 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 3075600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 6292855 - 6292805
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  6292855 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 6292805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 10215870 - 10215920
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  10215870 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 10215920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 10674603 - 10674553
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  10674603 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 10674553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 14277480 - 14277430
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||||||||| |||||||||  |||| ||||||||||    
T  14277480 gtttaaaactatatgttaatgaaattgtgaataaaa--aataacgaaaaatat 14277430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 31846788 - 31846738
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||| |||||||||||||||||||||||| |||  |||||||||||||||    
T  31846788 gtttaaagctatatgttaatgaaattatgaatcaaa--aatagcgaaaaatat 31846738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 41262475 - 41262525
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  41262475 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 41262525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 17496667 - 17496703
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  17496667 gtttaaaactatatgttaatgaaattgtgaataaaaa 17496703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 37265815 - 37265779
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  37265815 gtttaaaactatatgttaatgaaattgtgaataaaaa 37265779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 37837313 - 37837349
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  37837313 gtttaaaactatatgttaatgaaattgtgaataaaaa 37837349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 39998707 - 39998671
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  39998707 gtttaaaactatatgttaatgaaattgtgaataaaaa 39998671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 42166427 - 42166463
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  42166427 gtttaaaactatatgttaatgaaattgtgaataaaaa 42166463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 8627784 - 8627836
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||| ||||||||||||||||| |||||||||  ||||| |||||||||    
T  8627784 gagtttaaaattatatgttaatgaaattgtgaataaaa--aatagtgaaaaatat 8627836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 14879926 - 14879961
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||||||||||||||||| ||||||||||    
T  14879926 tttaaaactatatgttaatgaaattgtgaataaaaa 14879961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 43776633 - 43776581
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||| || |||||||||||||| |||||||||  |||||||||||||||    
T  43776633 gagtttaaaattacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 43776581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 8438236 - 8438189
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaa 223  Q
    |||||||||||||||||||| ||||| |||||||||  ||||||||||||    
T  8438236 gtttaaaactatatgttaataaaattgtgaataaaa--aatagcgaaaaa 8438189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 11759738 - 11759684
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||| ||||||| ||| |||||||||| ||||| |||| ||||    
T  11759738 gagtttaaaactatatattaatgagattgtgaataaaaaaaatagagaaagatat 11759684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 40299259 - 40299221
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||||||||||||| |||||| ||||||||||    
T  40299259 gagtttaaaactatatgttaaagaaattgtgaataaaaa 40299221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 17565073 - 17565123
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||||||||| | |||||||  ||||| |||||||||    
T  17565073 gtttaaaactatatgttaatgaaattgtaaataaaa--aatagagaaaaatat 17565123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 31739827 - 31739777
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||| ||||||||||    
T  31739827 gtttaaaactacatgttaatgaaattgtgaataaaa--aataacgaaaaatat 31739777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 32905066 - 32905116
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| | |||||||||||| |||||||||  |||||||||||||||    
T  32905066 gtttaaaactacaagttaatgaaattgtgaataaaa--aatagcgaaaaatat 32905116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 44147365 - 44147411
Alignment:
Q  178 aaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  44147365 aaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 44147411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 17734581 - 17734532
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||| |||||||||||||| |||||||||  ||||| |||||||||    
T  17734581 tttaaaactacatgttaatgaaattgtgaataaaa--aatagtgaaaaatat 17734532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 24809991 - 24810040
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaa 223  Q
    ||||||||||||| | |||||||||||| |||||||||  ||||||||||||    
T  24809991 gagtttaaaactacacgttaatgaaattgtgaataaaa--aatagcgaaaaa 24810040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 30354218 - 30354169
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaata 225  Q
    ||||||||||| | |||||||||||| |||||||||  ||||||||||||||    
T  30354218 gtttaaaactacaagttaatgaaattgtgaataaaa--aatagcgaaaaata 30354169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 37304629 - 37304665
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  37304629 gtttaaaactacatgttaatgaaattgtgaataaaaa 37304665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 44746581 - 44746617
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| | ||||||||    
T  44746581 gtttaaaactatatgttaatgaaattgtaaataaaaa 44746617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 15357273 - 15357223
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||||||    
T  15357273 gtttaaaactatatgttaatgaaattttgaataaaa--aatagcgaaaaatat 15357223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 19997943 - 19997893
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||||||    
T  19997943 gtttaaaactatatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 19997893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 28971235 - 28971285
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  28971235 gtttaaaactacatgttaatgaaattatgaataaaa--aatagcgaaaaatat 28971285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 44645668 - 44645718
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||||||    
T  44645668 gtttaaaactatatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 44645718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 47291909 - 47291859
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||||||    
T  47291909 gtttaaaactatatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 47291859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 47553476 - 47553426
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||||||    
T  47553476 gtttaaaactatatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 47553426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 1846202 - 1846150
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  1846202 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 1846150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 25068738 - 25068790
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  25068738 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 25068790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 38011584 - 38011636
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  38011584 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 38011636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 41321854 - 41321802
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  41321854 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 41321802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 29344835 - 29344797
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  29344835 gagtttaaaactatatgttaatgaaattgtgaataaaaa 29344797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 51764588 - 51764637
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||||||||||||||||||| |||||   |||||||||||||||    
T  51764588 gtttaaaactatatgttaatgaaattatgcataaa---aatagcgaaaaatat 51764637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 1386381 - 1386431
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  1386381 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 1386431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 7842058 - 7842108
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||||||||| |||||||||  ||||| |||||||||    
T  7842058 gtttaaaactatatgttaatgaaattgtgaataaaa--aatagagaaaaatat 7842108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 23739549 - 23739599
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||||||||| |||||||||  ||||| |||||||||    
T  23739549 gtttaaaactatatgttaatgaaattgtgaataaaa--aatagagaaaaatat 23739599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 25991153 - 25991203
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| || |||||||||||||||||||||  |||||||||||||||    
T  25991153 gtttaaaactacatattaatgaaattatgaataaaa--aatagcgaaaaatat 25991203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 44649024 - 44649074
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||| |||||||||||||||||||| |||||||||  |||||||||||||||    
T  44649024 gtttataactatatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 44649074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 45559434 - 45559384
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  45559434 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 45559384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 47216460 - 47216510
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  47216460 gtttaaaactaaatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 47216510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 794481 - 794517
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  794481 gtttaaaactatatgttaatgaaattgtgaataaaaa 794517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 4007943 - 4007979
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  4007943 gtttaaaactatatgttaatgaaattgtgaataaaaa 4007979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 28044883 - 28044932
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaata 225  Q
    ||||||||||| |||||||||||||| |||||||||  ||||||||||||||    
T  28044883 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaata 28044932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 37419208 - 37419244
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  37419208 gtttaaaactatatgttaatgaaattgtgaataaaaa 37419244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 46683014 - 46682978
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  46683014 gtttaaaactatatgttaatgaaattgtgaataaaaa 46682978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 36605132 - 36605167
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||||||||||||||||| ||||||||||    
T  36605132 tttaaaactatatgttaatgaaattgtgaataaaaa 36605167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 45738404 - 45738439
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||||||||||||||||| ||||||||||    
T  45738404 tttaaaactatatgttaatgaaattgtgaataaaaa 45738439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 52505635 - 52505583
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||| ||||||||    
T  52505635 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcaaaaaatat 52505583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 18406936 - 18406983
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaa 223  Q
    ||||||||||| |||||||||||||| |||||||||  ||||||||||||    
T  18406936 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaa 18406983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 31765741 - 31765788
Alignment:
Q  177 taaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  31765741 taaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 31765788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 9091380 - 9091430
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| ||||| |||||||| |||||||||  |||||||||||||||    
T  9091380 gtttaaaactacatgttgatgaaattgtgaataaaa--aatagcgaaaaatat 9091430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 24064866 - 24064816
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||| |||||||||||||||||||| | |||||||  |||||||||||||||    
T  24064866 gtttataactatatgttaatgaaattgtcaataaaa--aatagcgaaaaatat 24064816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 27226078 - 27226128
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||| |||| ||| ||||||||||||||||||  |||||||||||||||    
T  27226078 gtttaaaaatatacgttgatgaaattatgaataaaa--aatagcgaaaaatat 27226128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 29510216 - 29510266
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||||| ||||    
T  29510216 gtttaaaactatatgttaataaaattgtgaataaaa--aatagcgaaacatat 29510266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 41575026 - 41575072
Alignment:
Q  178 aaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  41575026 aaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 41575072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 2275493 - 2275529
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  2275493 gtttaaaactatatattaatgaaattgtgaataaaaa 2275529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 42830871 - 42830839
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataa 207  Q
    ||||||||||||||||||||||||| |||||||    
T  42830871 tttaaaactatatgttaatgaaattgtgaataa 42830839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 50143789 - 50143825
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  50143789 gtttaaaactatatgttaataaaattgtgaataaaaa 50143825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 351674 - 351723
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||||||||||||||| |||||||||  |||||||||||||||    
T  351674 tttaaaactatatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 351723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 18337854 - 18337805
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||||||||||||||| |||||||||  |||||||||||||||    
T  18337854 tttaaaactatatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 18337805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 4055069 - 4055017
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  4055069 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 4055017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 20691528 - 20691580
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  20691528 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 20691580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 37657807 - 37657859
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  37657807 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 37657859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 35751854 - 35751816
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  35751854 gagtttaaaactatatgttaatgaaattgtgaataaaaa 35751816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 141098 - 141048
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  141098 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 141048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 4877113 - 4877163
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| || |||||||||||||||||||||  |||||||||||||||    
T  4877113 gtttaaaactacatattaatgaaattatgaataaaa--aatagcgaaaaatat 4877163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 20540640 - 20540590
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  20540640 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 20540590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 30783050 - 30783000
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  30783050 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 30783000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 30920848 - 30920798
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||||||||||    
T  30920848 gtttaaaactatatgttaataaaattgtgaataaaa--aatagcgaaaaatat 30920798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 35751385 - 35751435
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||||||||| |||||||||  |||| ||||||||||    
T  35751385 gtttaaaactatatgttaatgaaattgtgaataaaa--aataacgaaaaatat 35751435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 36853926 - 36853963
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaac 211  Q
    |||||||||||||||||||||||||| |||||||||||    
T  36853926 gtttaaaactatatgttaatgaaattttgaataaaaac 36853963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 5138634 - 5138598
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  5138634 gtttaaaactatatgttaatgaaattgtgaataaaaa 5138598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 10687995 - 10688044
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||||||||||||||| |||||||||  |||| ||||||||||    
T  10687995 tttaaaactatatgttaatgaaattgtgaataaaa--aataacgaaaaatat 10688044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 13686374 - 13686410
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  13686374 gtttaaaactatatgttaatgaaattgtgaataaaaa 13686410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 14594479 - 14594515
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  14594479 gtttaaaactatatgttaatgaaattgtgaataaaaa 14594515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 17780753 - 17780789
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  17780753 gtttaaaactatatgttaatgaaattgtgaataaaaa 17780789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 19408875 - 19408839
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  19408875 gtttaaaactatatgttaatgaaattgtgaataaaaa 19408839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 22730727 - 22730678
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||||||||||||||| | |||||||  |||||||||||||||    
T  22730727 tttaaaactatatgttaatgaaattgttaataaaa--aatagcgaaaaatat 22730678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 207
Target Start/End: Complemental strand, 9017985 - 9017950
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataa 207  Q
    |||||||||||||||||||||||||||| |||||||    
T  9017985 gagtttaaaactatatgttaatgaaattgtgaataa 9017950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 24625228 - 24625280
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||| ||||||||    
T  24625228 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcaaaaaatat 24625280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 37334319 - 37334371
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||| |||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  37334319 gagtataaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 37334371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 6136069 - 6136035
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaa 208  Q
    |||||||||||||||||||||||||| ||||||||    
T  6136069 gtttaaaactatatgttaatgaaattgtgaataaa 6136035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 1198851 - 1198901
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| | |||||||||||| |||||||||  |||||||||||||||    
T  1198851 gtttaaaactacacgttaatgaaattgtgaataaaa--aatagcgaaaaatat 1198901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 1931616 - 1931566
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||| ||||||| |||||||||  |||||| ||||||||    
T  1931616 gtttaaaactatatgttattgaaattgtgaataaaa--aatagctaaaaatat 1931566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 8438143 - 8438193
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||| ||||||||||||||||| |||||||||  |||||| ||||||||    
T  8438143 gtttaaaattatatgttaatgaaattgtgaataaaa--aatagcaaaaaatat 8438193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 20183701 - 20183668
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaa 208  Q
    ||||||||||||||||||||||||| ||||||||    
T  20183701 tttaaaactatatgttaatgaaattgtgaataaa 20183668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 36737115 - 36737065
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||||||||| | |||||||  ||||| |||||||||    
T  36737115 gtttaaaactatatgttaatgaaattgtaaataaaa--aatagagaaaaatat 36737065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 36762519 - 36762569
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||| ||||||||    
T  36762519 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcaaaaaatat 36762569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 8573018 - 8572982
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  8573018 gtttaaaactatatgttattgaaattgtgaataaaaa 8572982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 15144747 - 15144711
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  15144747 gtttaaaattatatgttaatgaaattgtgaataaaaa 15144711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 17968153 - 17968117
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  17968153 gtttaaaactacatgttaatgaaattgtgaataaaaa 17968117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 18524097 - 18524133
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  18524097 gtttaaaactataggttaatgaaattgtgaataaaaa 18524133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 20259675 - 20259639
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||| | ||||||||||    
T  20259675 gtttaaaactatatgttaatgaaagtgtgaataaaaa 20259639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000005; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 37199269 - 37199233
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||||||||||||||    
T  37199269 gtttaaaactatatgttaatgaaattatgaataaaaa 37199233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 37009332 - 37009294
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  37009332 gagtttaaaactatatgttaatgaaattgtgaataaaaa 37009294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 3515141 - 3515091
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||||||||| ||||| |||  |||||||||||||||    
T  3515141 gtttaaaactatatgttaatgaaattgtgaatgaaa--aatagcgaaaaatat 3515091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 4437649 - 4437599
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  4437649 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 4437599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 5113942 - 5113892
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||| ||||||||||||||||| |||||||||  |||||||||||||||    
T  5113942 gtttaaaaatatatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 5113892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 38972804 - 38972754
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  38972804 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 38972754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 6229553 - 6229517
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  6229553 gtttaaaactatatgttaatgaaattgtgaataaaaa 6229517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 11796480 - 11796444
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  11796480 gtttaaaactatatgttaatgaaattgtgaataaaaa 11796444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 13873656 - 13873620
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  13873656 gtttaaaactatatgttaatgaaattgtgaataaaaa 13873620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 14013781 - 14013745
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  14013781 gtttaaaactatatgttaatgaaattgtgaataaaaa 14013745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 26197142 - 26197106
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||| ||||||||||||||||||||||||||||    
T  26197142 gtttaaaattatatgttaatgaaattatgaataaaaa 26197106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 33146438 - 33146474
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  33146438 gtttaaaactatatgttaatgaaattgtgaataaaaa 33146474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 40769039 - 40769003
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  40769039 gtttaaaactatatgttaatgaaattgtgaataaaaa 40769003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 3045267 - 3045232
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||||||||||||||||| ||||||||||    
T  3045267 tttaaaactatatgttaatgaaattttgaataaaaa 3045232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 7939733 - 7939768
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||||||||||||||||| ||||||||||    
T  7939733 tttaaaactatatgttaatgaaattgtgaataaaaa 7939768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 11564137 - 11564102
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||||||||||||||||| ||||||||||    
T  11564137 tttaaaactatatgttaatgaaattgtgaataaaaa 11564102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 16110897 - 16110949
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||| ||||||||    
T  16110897 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcaaaaaatat 16110949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 20894011 - 20894063
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| || ||||||||||| |||||||||  |||||||||||||||    
T  20894011 gagtttaaaactacatcttaatgaaattgtgaataaaa--aatagcgaaaaatat 20894063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 215
Target Start/End: Complemental strand, 24758447 - 24758408
Alignment:
Q  176 ttaaaactatatgttaatgaaattatgaataaaaacaata 215  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  24758447 ttaaaactatatgttaatgaaattgtgaataaaaaaaata 24758408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 42791821 - 42791769
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||| ||||| |||||||||  |||||||||||||||    
T  42791821 gagtttaaaactacatgttaatcaaattgtgaataaaa--aatagcgaaaaatat 42791769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 43657252 - 43657200
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  ||||||| |||||||    
T  43657252 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcggaaaatat 43657200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 10356865 - 10356903
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  10356865 gagtttaaaactatatgttaataaaattgtgaataaaaa 10356903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 22606652 - 22606618
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaa 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  22606652 gtttaaatctatatgttaatgaaattatgaataaa 22606618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 36451363 - 36451405
Alignment:
Q  168 aattgagtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||| |||||||||||||||||||||||| | ||||||||||    
T  36451363 aattgggtttaaaactatatgttaatgaaaatgtgaataaaaa 36451405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 64645 - 64595
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  ||||| |||||||||    
T  64645 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagagaaaaatat 64595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 8314053 - 8314103
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  ||||| |||||||||    
T  8314053 gtttaaaactacatgttaatgaaattttgaataaaa--aatagtgaaaaatat 8314103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 22297922 - 22297872
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||| ||||| |||||||||  |||| ||||||||||    
T  22297922 gtttaaaactatatgttaataaaattgtgaataaaa--aataacgaaaaatat 22297872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 207
Target Start/End: Complemental strand, 24387336 - 24387303
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataa 207  Q
    ||||||||||| ||||||||||||||||||||||    
T  24387336 gtttaaaactagatgttaatgaaattatgaataa 24387303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 35899478 - 35899428
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  | |||||||||||||    
T  35899478 gtttaaaactacatgttaatgaaattgtgaataaaa--attagcgaaaaatat 35899428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 552242 - 552278
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  552242 gtttaaaactacatgttaatgaaattgtgaataaaaa 552278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 6077779 - 6077828
Alignment:
Q  176 ttaaaactata-tgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| ||||||||||||| |||||||||  |||||||||||||||    
T  6077779 ttaaaactataatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 6077828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 11564754 - 11564705
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||| ||||||||||||||  ||||||||  |||||||||||||||    
T  11564754 tttaaaactacatgttaatgaaattgagaataaaa--aatagcgaaaaatat 11564705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 15006765 - 15006729
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  15006765 gtttaaaactatatgttattgaaattgtgaataaaaa 15006729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 18468113 - 18468077
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  18468113 gtttaaaactatatgttaataaaattgtgaataaaaa 18468077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 31364215 - 31364179
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  31364215 gtttaaaattatatgttaatgaaattgtgaataaaaa 31364179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 34173383 - 34173347
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||| | ||||||||||    
T  34173383 gtttaaaactatatgttaatgaaactgtgaataaaaa 34173347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 34247798 - 34247834
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  34247798 gtttaaaactacatgttaatgaaattgtgaataaaaa 34247834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2113 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold2113
Description:

Target: scaffold2113; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 1068 - 1016
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  1068 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 1016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 19377 - 19429
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  19377 gagtttaaaactacatgttaatgaaattgtgaataaaa--aatagcgaaaaatat 19429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 16818 - 16768
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||||||||||    
T  16818 gtttaaaactatatgttaataaaattgtgaataaaa--aatagcgaaaaatat 16768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 12594 - 12645
Alignment:
Q  172 gagtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||| |||||||||||| ||||||||||   |||||||||||||||    
T  12594 gagtttaaaactacatgttaatgaaagtatgaataaa---aatagcgaaaaatat 12645  T

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Target: scaffold0201 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 15028 - 14992
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  15028 gtttaaaactatatgttaatgaaattgtgaataaaaa 14992  T

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Target: scaffold0102 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 26757 - 26793
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||| ||||||||||||||||||||||||||||    
T  26757 gtttaaaattatatgttaatgaaattatgaataaaaa 26793  T

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Target: scaffold0289 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 3714 - 3679
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    ||||||||||||||||||||||||| ||||||||||    
T  3714 tttaaaactatatgttaatgaaattgtgaataaaaa 3679  T

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Target: scaffold0971 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0971
Description:

Target: scaffold0971; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 3505 - 3555
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    |||||| |||| |||||||||||||||| |||||||  |||||||||||||||    
T  3505 gtttaacactacatgttaatgaaattattaataaaa--aatagcgaaaaatat 3555  T

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Target: scaffold0023 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 90671 - 90621
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| |||||||||||||| |||||||||  |||||| ||||||||    
T  90671 gtttaaaactacatgttaatgaaattgtgaataaaa--aatagctaaaaatat 90621  T

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Target: scaffold1192 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1192
Description:

Target: scaffold1192; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 496 - 460
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||||||||||||||||||||  ||||||||||    
T  496 gtttaaaactatatgttaatgaaatattgaataaaaa 460  T

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Target: scaffold0712 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 3987 - 3951
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  3987 gtttaaaattatatgttaatgaaattgtgaataaaaa 3951  T

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Target: scaffold0709 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 4007 - 3971
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  4007 gtttaaaattatatgttaatgaaattgtgaataaaaa 3971  T

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Target: scaffold0368 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 10927 - 10895
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataa 207  Q
    ||||||||||||||||||||||||| |||||||    
T  10927 tttaaaactatatgttaatgaaattgtgaataa 10895  T

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Target: scaffold0189 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 11692 - 11728
Alignment:
Q  174 gtttaaaactatatgttaatgaaattatgaataaaaa 210  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  11692 gtttaaaattatatgttaatgaaattgtgaataaaaa 11728  T

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Target: scaffold0115 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 31091 - 31140
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||||||||||||||||  |||||||||  ||||| |||||||||    
T  31091 tttaaaactatatgttaatgaaatagtgaataaaa--aatagtgaaaaatat 31140  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 25622 - 25671
Alignment:
Q  175 tttaaaactatatgttaatgaaattatgaataaaaacaatagcgaaaaatat 226  Q
    ||||||||||| ||||||||||||| |||||||||  |||| ||||||||||    
T  25622 tttaaaactatttgttaatgaaattgtgaataaaa--aataacgaaaaatat 25671  T

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