View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21040_low_4 (Length: 570)
Name: NF21040_low_4
Description: NF21040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21040_low_4 |
 | |
|
| [»] scaffold0201 (1 HSPs) |
| | |
|
| [»] scaffold0570 (3 HSPs) |
| | |
|
Alignment Details
Target: scaffold0201 (Bit Score: 416; Significance: 0; HSPs: 1)
Name: scaffold0201
Description:
Target: scaffold0201; HSP #1
Raw Score: 416; E-Value: 0
Query Start/End: Original strand, 19 - 538
Target Start/End: Complemental strand, 13570 - 13051
Alignment:
| Q |
19 |
aaaatggtgcttaaatgagctcaaaaagattcttgaatgcaagcaatatatggaacagattgtgatacctgttttttacaacatagatccagcaaatgtg |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13570 |
aaaatggtgcttaaatgagctcaaaaagattcttgaatgcaagaaatatatggaacagattgtgatacctgttttttacaacatagatccagcaaatgtg |
13471 |
T |
|
| Q |
119 |
aggaagcagactgggagttaccagcaagccttcgcaaaacataagcgagatttgaagcacaataacgatgagttggagaaatggaaagctgctctcactg |
218 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
13470 |
aggaagcagactggaagttaccagcaagcctttgcaaaacataagcgagatttgaagcacaataacgataagttggagaaatggaaagctgctctcactg |
13371 |
T |
|
| Q |
219 |
atgcagctaatttagttggttgggactctcgaaactataggtaagtaaaacgaactatccaactttccacatgtcatgacttgtaagtttaaaaaatgct |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13370 |
atgcagctaatttagttggttgggactctcgaaattataggtaagtaaaacgaactatccaactttccacatgtcatgacttgtaagtttaaaaaatgct |
13271 |
T |
|
| Q |
319 |
aagtaaatcaataaactatatcctatgatttgcaagttttgttttctaatatagcacaatttcctactacacaagtttttcatctccatattcgtgattg |
418 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| ||| |||||||||| ||||| || ||| |
|
|
| T |
13270 |
aagtaaatcaataaactatatcctatgatttgcaagttttgttttttaacatagcacaattatttactacatgagtctttcatctccttattcatggttg |
13171 |
T |
|
| Q |
419 |
gaaatgaacataaattttagaaaatgaaagctaaaaatatttttagaaagtaaacaagcccaattatttggagaagtgaacaatgatgttgacatgcctt |
518 |
Q |
| |
|
|||||||||||| |||||| |||||||||||||||| || |||||||||||||||| ||| ||||||||||||||||||||||||||||| | ||||| |
|
|
| T |
13170 |
gaaatgaacatagattttaaaaaatgaaagctaaaattaattttagaaagtaaacaggccgaattatttggagaagtgaacaatgatgtttatgtgcctg |
13071 |
T |
|
| Q |
519 |
gccatagttgatatgacctt |
538 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
13070 |
gccatagttgatatgacctt |
13051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0570 (Bit Score: 379; Significance: 0; HSPs: 3)
Name: scaffold0570
Description:
Target: scaffold0570; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 19 - 524
Target Start/End: Original strand, 9770 - 10275
Alignment:
| Q |
19 |
aaaatggtgcttaaatgagctcaaaaagattcttgaatgcaagcaatatatggaacagattgtgatacctgttttttacaacatagatccagcaaatgtg |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
9770 |
aaaatggtgcttaaatgagctcaaaaagattcttgaatgcaagcaatatatggaacagatggtgatacctgttttttacaacttagatccagcaaatgtg |
9869 |
T |
|
| Q |
119 |
aggaagcagactgggagttaccagcaagccttcgcaaaacataagcgagatttgaagcacaataacgatgagttggagaaatggaaagctgctctcactg |
218 |
Q |
| |
|
|| ||||||||||| |||||| |||||||||| | |||||||||||||||||||||| |||||| || ||||| |||| |||||||| |||||||| | |
|
|
| T |
9870 |
agaaagcagactggaagttacgagcaagcctttgaaaaacataagcgagatttgaagagcaataatgacaagttgaagaactggaaagccgctctcaccg |
9969 |
T |
|
| Q |
219 |
atgcagctaatttagttggttgggactctcgaaactataggtaagtaaaacgaactatccaactttccacatgtcatgacttgtaagtttaaaaaatgct |
318 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
9970 |
aggcagctaatttagttggttgggactctcgaaattataggtaagtaaaacgaactatccaactttccacatgtcatgacttgtaagtttaaaaaattct |
10069 |
T |
|
| Q |
319 |
aagtaaatcaataaactatatcctatgatttgcaagttttgttttctaatatagcacaatttcctactacacaag-tttttcatctccatattcgtgatt |
417 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
10070 |
aagtaaatcaataagctatatcctatgatttgcaag-tttgttttctaatatagcacaatttcttactacacaagttttttcatctccatatttgtgatt |
10168 |
T |
|
| Q |
418 |
ggaaatgaacataaattttagaaaatgaaagctaaaaatatttttagaaagtaaacaagcccaattatttggagaagtgaacaatgatgttgacatgcct |
517 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
10169 |
ggaaatgaacataaattttagaaaatgaaagctaaaaataattttagaaagtaaacaggcccaattatttggagaagtaaacaatgatgttgatgtgcct |
10268 |
T |
|
| Q |
518 |
tgccata |
524 |
Q |
| |
|
|||||| |
|
|
| T |
10269 |
ggccata |
10275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0570; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 3335 - 3425
Alignment:
| Q |
19 |
aaaatggtgcttaaatgagctcaaaaagattcttgaatgcaagcaatatatggaacagattgtgatacctgttttttacaacatagatcca |
109 |
Q |
| |
|
|||||| ||||| |||||||||||||||||| | |||||| || ||||||||||||||||||| || ||||||||||| ||||||||||| |
|
|
| T |
3335 |
aaaatgatgcttgaatgagctcaaaaagattatagaatgctagaaatatatggaacagattgtaatgtctgttttttacgacatagatcca |
3425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0570; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 3472 - 3542
Alignment:
| Q |
145 |
agccttcgcaaaacataagcgagatttgaagcacaataacgatgagttggagaaatggaaagctgctctca |
215 |
Q |
| |
|
|||||||| |||||||| |||||| ||||||||||||| || ||||| ||||||||||||||| ||||| |
|
|
| T |
3472 |
agccttcgaaaaacataggcgagaactgaagcacaataatgacaagttgcagaaatggaaagctggtctca |
3542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 237; Significance: 1e-131; HSPs: 25)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 19 - 538
Target Start/End: Complemental strand, 23480753 - 23480233
Alignment:
| Q |
19 |
aaaatggtgcttaaatgagctcaaaaagattcttgaatgcaagcaatatatggaacagattgtgatacctgttttttacaacatagatccagcaaatgtg |
118 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||||||| |||||| |||||| ||||||||||| ||||||||||| ||||||||| || ||||| |
|
|
| T |
23480753 |
aaaatggtgcttgaatgagctcaagaagattcttgaatgcaagaaatataaggaacacattgtgataccagttttttacaaaatagatccatcacatgtg |
23480654 |
T |
|
| Q |
119 |
aggaagcagactgggagttaccagcaagccttcgcaaaacataagcgagatttgaagcacaataacgatgagttggagaaatggaaagctgctctcactg |
218 |
Q |
| |
|
||||| ||||| ||||||||| ||||||| || |||||||||||||||||||||||| |||||| || |||| || |||||||||| |||||||||| |
|
|
| T |
23480653 |
aggaaccagaccgggagttacgagcaagcttttgcaaaacataagcgagatttgaagagcaataatgacaagttacaggaatggaaagccgctctcactg |
23480554 |
T |
|
| Q |
219 |
atgcagctaatttagttggttgggactctcgaaactataggtaagtaaaacgaactatccaactttccacatgtcatgacttgtaagtttaaaaaatgct |
318 |
Q |
| |
|
| ||||||| ||||| |||||||||| || ||| | | ||||||||||||||||||| | |||| ||||| ||||||||||| ||| ||||| || |
|
|
| T |
23480553 |
aggcagctagtttaggcggttgggactttcaaaattttgagtaagtaaaacgaactatcgagctttgtacatgccatgacttgtatgttctcaaaattct |
23480454 |
T |
|
| Q |
319 |
aagt-aaatcaataaactatatcctatgatttgcaagttttgttttctaatatagcacaatttcctactacacaagtttttcatctccatattcgtgatt |
417 |
Q |
| |
|
|||| ||| ||||||||||| | ||| |||| || |||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||| || || |
|
|
| T |
23480453 |
aagtaaaaccaataaactattttatataattttcatgttttgttttctaatatagcacaattatatactacatgagtctttcatctccttattcatggtt |
23480354 |
T |
|
| Q |
418 |
ggaaatgaacataaattttagaaaatgaaagctaaaaatatttttagaaagtaaacaagcccaattatttggagaagtgaacaatgatgttgacatgcct |
517 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||||| || |||||||||||||||| ||| ||||||||||||||||||||||||||||| | ||||| |
|
|
| T |
23480353 |
ggaaatgaacatagattttaaaaaatgaaagctaaaattaattttagaaagtaaacaggccgaattatttggagaagtgaacaatgatgtttatgtgcct |
23480254 |
T |
|
| Q |
518 |
tgccatagttgatatgacctt |
538 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
23480253 |
ggccatagttgatatgacctt |
23480233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 19 - 268
Target Start/End: Complemental strand, 23465396 - 23465147
Alignment:
| Q |
19 |
aaaatggtgcttaaatgagctcaaaaagattcttgaatgcaagcaatatatggaacagattgtgatacctgttttttacaacatagatccagcaaatgtg |
118 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| || ||||| |
|
|
| T |
23465396 |
aaaatggtgcttgaatgagctcaaaaagattcttgaatgcaagaaatatatggaacagattgtgataccagttttttacaacatagatccatcacatgtg |
23465297 |
T |
|
| Q |
119 |
aggaagcagactgggagttaccagcaagccttcgcaaaacataagcgagatttgaagcacaataacgatgagttggagaaatggaaagctgctctcactg |
218 |
Q |
| |
|
||||||||||| ||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
23465296 |
aggaagcagaccgggagttacaagcaagcctttgcaaaacataagcgaaatttgaagcacaataacgataagttggagaaatggaaagctgctctcactg |
23465197 |
T |
|
| Q |
219 |
atgcagctaatttagttggttgggactctcgaaactataggtaagtaaaa |
268 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
23465196 |
atgcagctaatttagttggttgggactctcgaaattataggtaagtaaaa |
23465147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 19 - 308
Target Start/End: Complemental strand, 23353893 - 23353604
Alignment:
| Q |
19 |
aaaatggtgcttaaatgagctcaaaaagattcttgaatgcaagcaatatatggaacagattgtgatacctgttttttacaacatagatccagcaaatgtg |
118 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||| || ||||| |
|
|
| T |
23353893 |
aaaatggtgcttgaatgagctcaaaaagattcttgaatgcaagaaatatatgtaacagattgtgataccagttttttacaacatagatccatcacatgtg |
23353794 |
T |
|
| Q |
119 |
aggaagcagactgggagttaccagcaagccttcgcaaaacataagcgagatttgaagcacaataacgatgagttggagaaatggaaagctgctctcactg |
218 |
Q |
| |
|
||||||||||| ||||||||| |||||||||| | |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| | |
|
|
| T |
23353793 |
aggaagcagaccgggagttacaagcaagcctttgaaaaacataagcgagatttgaagcacaataatgacaagttggagaaatggaaagctgctctcaccg |
23353694 |
T |
|
| Q |
219 |
atgcagctaatttagttggttgggactctcgaaactataggtaagtaaaacgaactatccaactttccacatgtcatgacttgtaagttt |
308 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| | | ||| ||||||||||||||||| |||| |
|
|
| T |
23353693 |
aggcagctaatttagttggttgggactctcgaaattataggtgagtaaaacgaactatcaagcattctacatgtcatgacttgtatgttt |
23353604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 19 - 376
Target Start/End: Complemental strand, 23456027 - 23455668
Alignment:
| Q |
19 |
aaaatggtgcttaaatgagctcaaaaagattcttgaatgcaagcaatatatggaacagattgtgatacctgttttttacaacatagatccagcaaatgtg |
118 |
Q |
| |
|
||||||||| || ||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||| || ||||| |
|
|
| T |
23456027 |
aaaatggtgtttgaatgatctcaaaaagattctagaatgcaagcaatatatggaacagatcgtgatacctattttttacaacattgatccatcacatgtg |
23455928 |
T |
|
| Q |
119 |
aggaagcagactgggagttaccagcaagccttcgcaaaacataagcgagatttgaagcacaataacgatgagttggagaaatggaaagctgctctcactg |
218 |
Q |
| |
|
|||||||| || ||||||||| |||||||||| ||||||||||||| |||||||||||||||||| | ||||||||||||||||||| ||||||||| |
|
|
| T |
23455927 |
aggaagcaaaccgggagttacaagcaagcctttgcaaaacataagcaagatttgaagcacaataatgccaagttggagaaatggaaagcctctctcactg |
23455828 |
T |
|
| Q |
219 |
atgcagctaatttagttggttgggactctcgaaactataggtaagtaaaacgaactatccaactttccacatg-tcatgacttgtaagtttaaaaaatgc |
317 |
Q |
| |
|
| ||||||||||||||||| |||||||||| ||| ||||||||| |||||| ||||||||| |||| | ||| |||| ||||||| |||| ||||| | |
|
|
| T |
23455827 |
aggcagctaatttagttggatgggactctcaaaattataggtaaataaaacaaactatccagctttggatatgttcatcacttgtatgtttccaaaattc |
23455728 |
T |
|
| Q |
318 |
taagt-aaatcaataaactatatcctatgatttgcaagttttgttttctaatatagcaca |
376 |
Q |
| |
|
|||| ||||||||||||||| |||||| ||||||| ||||||| ||||||||||||||| |
|
|
| T |
23455727 |
aaagtaaaatcaataaactatttcctatcatttgcatgttttgtattctaatatagcaca |
23455668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 19 - 278
Target Start/End: Complemental strand, 23449263 - 23449004
Alignment:
| Q |
19 |
aaaatggtgcttaaatgagctcaaaaagattcttgaatgcaagcaatatatggaacagattgtgatacctgttttttacaacatagatccagcaaatgtg |
118 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||| || ||||| |
|
|
| T |
23449263 |
aaaatggtgcttgaatgagctcaaaaagattcttgaatgcaagaaatatatgcaacagattgtgataccagttttttacaacatagatccatcacatgtg |
23449164 |
T |
|
| Q |
119 |
aggaagcagactgggagttaccagcaagccttcgcaaaacataagcgagatttgaagcacaataacgatgagttggagaaatggaaagctgctctcactg |
218 |
Q |
| |
|
||||||||||| ||||||||| |||||||||| ||||||||||||| |||||||||||||||||| || ||||| |||||||||||| | ||||||| | |
|
|
| T |
23449163 |
aggaagcagaccgggagttacaagcaagcctttgcaaaacataagcaagatttgaagcacaataatgacaagttgaagaaatggaaagattctctcaccg |
23449064 |
T |
|
| Q |
219 |
atgcagctaatttagttggttgggactctcgaaactataggtaagtaaaacgaactatcc |
278 |
Q |
| |
|
| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
23449063 |
aggcagctaatttggttggttgggactctcgaaattataggtaagtaaaacgaactatcc |
23449004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 19 - 268
Target Start/End: Complemental strand, 23406742 - 23406493
Alignment:
| Q |
19 |
aaaatggtgcttaaatgagctcaaaaagattcttgaatgcaagcaatatatggaacagattgtgatacctgttttttacaacatagatccagcaaatgtg |
118 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
23406742 |
aaaatggtgcttgaatgagctcaaaaagattcttgaatgcaagaaatatatggaacagattgtgatacctgttttttacaacatagatccatcaaatgtg |
23406643 |
T |
|
| Q |
119 |
aggaagcagactgggagttaccagcaagccttcgcaaaacataagcgagatttgaagcacaataacgatgagttggagaaatggaaagctgctctcactg |
218 |
Q |
| |
|
||||||||||| ||||||||| |||||||||| |||||||||||||||||||| ||||||||||| || ||||| |||||||||||| | ||||||||| |
|
|
| T |
23406642 |
aggaagcagaccgggagttacaagcaagcctttgcaaaacataagcgagatttaaagcacaataatgacaagttgaagaaatggaaagattctctcactg |
23406543 |
T |
|
| Q |
219 |
atgcagctaatttagttggttgggactctcgaaactataggtaagtaaaa |
268 |
Q |
| |
|
| ||||||||||| |||||||||||||||| ||| |||||| |||||||| |
|
|
| T |
23406542 |
aggcagctaatttggttggttgggactctcaaaattataggcaagtaaaa |
23406493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 19 - 278
Target Start/End: Complemental strand, 23501026 - 23500767
Alignment:
| Q |
19 |
aaaatggtgcttaaatgagctcaaaaagattcttgaatgcaagcaatatatggaacagattgtgatacctgttttttacaacatagatccagcaaatgtg |
118 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||||||| || ||||| |
|
|
| T |
23501026 |
aaaatggtgcttgaatgagctcaaaaagattcttgaatgtaagaaatatatggagcagattgtgataccagttttttacaacatagatccatcacatgtg |
23500927 |
T |
|
| Q |
119 |
aggaagcagactgggagttaccagcaagccttcgcaaaacataagcgagatttgaagcacaataacgatgagttggagaaatggaaagctgctctcactg |
218 |
Q |
| |
|
||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||| || ||||| |||||||||||| | ||||||| | |
|
|
| T |
23500926 |
aggaagcagaccgggagttacaagcaagcctttgcaaaacataagcgagatttgaagcacaataatgacaagttgaagaaatggaaagattctctcaccg |
23500827 |
T |
|
| Q |
219 |
atgcagctaatttagttggttgggactctcgaaactataggtaagtaaaacgaactatcc |
278 |
Q |
| |
|
| ||||||||||| |||||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
23500826 |
aggcagctaatttggttggttgggactctcgaaattacaggtaagtaaaacgaactatcc |
23500767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 19 - 303
Target Start/End: Complemental strand, 23435461 - 23435180
Alignment:
| Q |
19 |
aaaatggtgcttaaatgagctcaaaaagattcttgaatgcaagcaatatatggaacagattgtgatacctgttttttacaacatagatccagcaaatgtg |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||| |||| || ||||| |
|
|
| T |
23435461 |
aaaatggtgcttaaatgagctcaaaaagattctagaatgcaagcaatatatggaattgaccgtgatacctgttttttacaacat---tccatcacatgtg |
23435365 |
T |
|
| Q |
119 |
aggaagcagactgggagttaccagcaagccttcgcaaaacataagcgagatttgaagcacaataacgatgagttggagaaatggaaagctgctctcactg |
218 |
Q |
| |
|
||||||||||| ||||||||| ||||||| || |||||||||||||||||||||||||||||||| || ||||| | ||||||||||| |||||||||| |
|
|
| T |
23435364 |
aggaagcagaccgggagttacaagcaagcatttgcaaaacataagcgagatttgaagcacaataatgacaagttgcataaatggaaagccgctctcactg |
23435265 |
T |
|
| Q |
219 |
atgcagctaatttagttggttgggactctcgaaactataggtaagtaaaacgaactatccaactttccacatgtcatgacttgta |
303 |
Q |
| |
|
| |||||||||||||||||||||||||||| ||| |||||||||| ||||||| ||||||| |||| ||||||||||||||||| |
|
|
| T |
23435264 |
aggcagctaatttagttggttgggactctcaaaattataggtaagaaaaacgacctatccagatttctacatgtcatgacttgta |
23435180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 19 - 272
Target Start/End: Complemental strand, 23441873 - 23441620
Alignment:
| Q |
19 |
aaaatggtgcttaaatgagctcaaaaagattcttgaatgcaagcaatatatggaacagattgtgatacctgttttttacaacatagatccagcaaatgtg |
118 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
23441873 |
aaaatggtgcttgaatgagctcaaaaagattcttgaatgcaagaaatatatggtacagattgtgatacctgttttttacaacatagatccatcacatgtg |
23441774 |
T |
|
| Q |
119 |
aggaagcagactgggagttaccagcaagccttcgcaaaacataagcgagatttgaagcacaataacgatgagttggagaaatggaaagctgctctcactg |
218 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || |||| || ||||||||| ||| ||||||| |
|
|
| T |
23441773 |
aggaagcagactgggagttacaagcaagccttcgcaaaacataagcgagatttgaagagcaataatgacaagttacaggaatggaaagatgcactcactg |
23441674 |
T |
|
| Q |
219 |
atgcagctaatttagttggttgggactctcgaaactataggtaagtaaaacgaa |
272 |
Q |
| |
|
| ||||||| |||||||||||||||||||| ||| || |||||| |||||||| |
|
|
| T |
23441673 |
aggcagctagtttagttggttgggactctcaaaattacaggtaaacaaaacgaa |
23441620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 19 - 272
Target Start/End: Complemental strand, 23474405 - 23474152
Alignment:
| Q |
19 |
aaaatggtgcttaaatgagctcaaaaagattcttgaatgcaagcaatatatggaacagattgtgatacctgttttttacaacatagatccagcaaatgtg |
118 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
23474405 |
aaaatggtgcttgaatgagctcaaaaagattcttgaatgcaagaaatatatggtacagattgtgatacctgttttttacaacatagatccatcacatgtg |
23474306 |
T |
|
| Q |
119 |
aggaagcagactgggagttaccagcaagccttcgcaaaacataagcgagatttgaagcacaataacgatgagttggagaaatggaaagctgctctcactg |
218 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || |||| || ||||||||| ||| ||||||| |
|
|
| T |
23474305 |
aggaagcagactgggagttacaagcaagccttcgcaaaacataagcgagatttgaagagcaataatgacaagttacaggaatggaaagatgcactcactg |
23474206 |
T |
|
| Q |
219 |
atgcagctaatttagttggttgggactctcgaaactataggtaagtaaaacgaa |
272 |
Q |
| |
|
| ||||||| |||||||||||||||||||| ||| || |||||| |||||||| |
|
|
| T |
23474205 |
aggcagctagtttagttggttgggactctcaaaattacaggtaaacaaaacgaa |
23474152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 19 - 279
Target Start/End: Complemental strand, 23388382 - 23388122
Alignment:
| Q |
19 |
aaaatggtgcttaaatgagctcaaaaagattcttgaatgcaagcaatatatggaacagattgtgatacctgttttttacaacatagatccagcaaatgtg |
118 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
23388382 |
aaaatggtgcttgaatgagctcaagaagattcttcaatgcaagaaatatatgcaacagattgtgatacctgttttttacaacatagatccctcacatgtg |
23388283 |
T |
|
| Q |
119 |
aggaagcagactgggagttaccagcaagccttcgcaaaacataagcgagatttgaagcacaataacgatgagttggagaaatggaaagctgctctcactg |
218 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||| |||||| || |||| || |||||||||| ||||| | | |
|
|
| T |
23388282 |
aggaagcagactgggagttacgagcaagccttcacaaaacatatgcgagatttgaagctcaataatgacaagttacaggaatggaaagccgctcttgccg |
23388183 |
T |
|
| Q |
219 |
atgcagctaatttagttggttgggactctcgaaactataggtaagtaaaacgaactatcca |
279 |
Q |
| |
|
| ||||||| ||||||||||||||||| || || || |||||||| ||| ||||| |||| |
|
|
| T |
23388182 |
aggcagctagtttagttggttgggactttcagaattacaggtaagttaaaggaactctcca |
23388122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 317 - 475
Target Start/End: Complemental strand, 23449004 - 23448846
Alignment:
| Q |
317 |
ctaagtaaatcaataaactatatcctatgatttgcaagttttgttttctaatatagcacaatttcctactacacaagtttttcatctccatattcgtgat |
416 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
23449004 |
ctaagtaaatcaataaactatatcctatgatttgcaagttttgttttctaatatagcacaattttttactacacaagtttttcatttccatattcgtgat |
23448905 |
T |
|
| Q |
417 |
tggaaatgaacataaattttagaaaatgaaagctaaaaatatttttagaaagtaaacaa |
475 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
23448904 |
tggaaatgaacataaatttgagaaaatgaaagctaataataactttagaaagtaaacaa |
23448846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 317 - 475
Target Start/End: Complemental strand, 23500767 - 23500609
Alignment:
| Q |
317 |
ctaagtaaatcaataaactatatcctatgatttgcaagttttgttttctaatatagcacaatttcctactacacaagtttttcatctccatattcgtgat |
416 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
23500767 |
ctaagtaaatcaataaactatatcctatgatttgcaagttttgttttctaatatagcacaattttttacaacacaagtttttcatctccatattcgtgat |
23500668 |
T |
|
| Q |
417 |
tggaaatgaacataaattttagaaaatgaaagctaaaaatatttttagaaagtaaacaa |
475 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
23500667 |
tggaaatgaacataaatttgagaaaatgaaagctaataataactttagaaagtaaacaa |
23500609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 323 - 530
Target Start/End: Complemental strand, 23465149 - 23464942
Alignment:
| Q |
323 |
aaatcaataaactatatcctatgatttgcaagttttgttttctaatatagcacaatttcctactacacaagtttttcatctccatattcgtgattggaaa |
422 |
Q |
| |
|
||||||||||||||| |||||| ||||| | ||||||||| |||||||||||||||| |||| || |||| ||||||||||||||| || ||||||| |
|
|
| T |
23465149 |
aaatcaataaactatttcctatcatttgaatgttttgttt-ctaatatagcacaattgtttacttcataagtctttcatctccatatttgtagttggaaa |
23465051 |
T |
|
| Q |
423 |
tgaacataaattttagaaaatgaaagctaaaaatatttttagaaagtaaa-caagcccaattatttggagaagtgaacaatgatgttgacatgccttgcc |
521 |
Q |
| |
|
||||||||||||||||||| |||| | ||| ||| |||||||||||||| || ||| |||||||| |||||||||||||||| |||| ||||| ||| |
|
|
| T |
23465050 |
tgaacataaattttagaaattgaagacgaaatataattttagaaagtaaaccaggccaaattatttcgagaagtgaacaatgacattgatgtgcctggcc |
23464951 |
T |
|
| Q |
522 |
atagttgat |
530 |
Q |
| |
|
||||||||| |
|
|
| T |
23464950 |
atagttgat |
23464942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 323 - 530
Target Start/End: Complemental strand, 23406495 - 23406288
Alignment:
| Q |
323 |
aaatcaataaactatatcctatgatttgcaagttttgttttctaatatagcacaatttcctactacacaagtttttcatctccatattcgtgattggaaa |
422 |
Q |
| |
|
||||||||||||||| |||||| ||||| | ||||||||| |||||||||||||||| |||| || |||| ||||||||||||||| || ||||||| |
|
|
| T |
23406495 |
aaatcaataaactatttcctatcatttgaatgttttgttt-ctaatatagcacaattatttacttcataagtctttcatctccatatttgtagttggaaa |
23406397 |
T |
|
| Q |
423 |
tgaacataaattttagaaaatgaaagctaaaaatatttttagaaagtaaa-caagcccaattatttggagaagtgaacaatgatgttgacatgccttgcc |
521 |
Q |
| |
|
||||||||||||||||||| ||| | ||| ||| |||||||||||||| || ||| |||||||| |||||||||||||||| |||| ||||| ||| |
|
|
| T |
23406396 |
tgaacataaattttagaaatcgaagacgaaatataattttagaaagtaaaccaggccaaattatttcgagaagtgaacaatgacattgatgtgcctggcc |
23406297 |
T |
|
| Q |
522 |
atagttgat |
530 |
Q |
| |
|
||||||||| |
|
|
| T |
23406296 |
atagttgat |
23406288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 21088568 - 21088416
Alignment:
| Q |
19 |
aaaatggtgcttaaatgagctcaaaaagattcttgaatgcaagcaatatatggaacagattgtgatacctgttttttacaacatagatccagcaaatgtg |
118 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||| | || || |
|
|
| T |
21088568 |
aaaatggtgcttgaatgagctcaaaaagattcaagaatgcaagaaatttatggaacagattgtgatacctgttttttacaaaatagatccattacatatg |
21088469 |
T |
|
| Q |
119 |
aggaagcagactgggagttaccagcaagccttcgcaaaacataagcgagattt |
171 |
Q |
| |
|
| |||||||||| |||||||| || || |||| | ||| |||| ||||||||| |
|
|
| T |
21088468 |
aagaagcagacttggagttacaagaaaacctttgaaaagcatatgcgagattt |
21088416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 362 - 475
Target Start/End: Complemental strand, 23353572 - 23353459
Alignment:
| Q |
362 |
ttctaatatagcacaatttcctactacacaagtttttcatctccatattcgtgattggaaatgaacataaattttagaaaatgaaagctaaaaatatttt |
461 |
Q |
| |
|
|||||| | ||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||| |
|
|
| T |
23353572 |
ttctaaaacagcacaattatttactacacaagtctttcatctccatattcgtgactggaaatgaacatagattttagaaaatgaaagcaaaaaataattt |
23353473 |
T |
|
| Q |
462 |
tagaaagtaaacaa |
475 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
23353472 |
tagaaagtaaacaa |
23353459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 323 - 474
Target Start/End: Complemental strand, 23441606 - 23441455
Alignment:
| Q |
323 |
aaatcaataaactatatcctatgatttgcaagttttgttttctaatatagcacaatttcctactacacaagtttttcatctccatattcgtgattggaaa |
422 |
Q |
| |
|
|||| |||||||||| || ||| |||| || ||||||||||||||||||||||| | ||||||| ||| |||||||||||||||| | |||||||| |
|
|
| T |
23441606 |
aaataaataaactatttcatatcatttacatgttttgttttctaatatagcacagctatttactacatgagtctttcatctccatattcttaattggaaa |
23441507 |
T |
|
| Q |
423 |
tgaacataaattttagaaaatgaaagctaaaaatatttttagaaagtaaaca |
474 |
Q |
| |
|
|||||||||||||||||||| || ||||||||| |||| |||| |||||| |
|
|
| T |
23441506 |
tgaacataaattttagaaaacaaacactaaaaataatttttgaaaataaaca |
23441455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 74 - 225
Target Start/End: Complemental strand, 36034213 - 36034062
Alignment:
| Q |
74 |
cagattgtgatacctgttttttacaacatagatccagcaaatgtgaggaagcagactgggagttaccagcaagccttcgcaaaacataagcgagatttga |
173 |
Q |
| |
|
|||||||||||||| |||| ||| | ||||||||| || |||||||||| || | |||||||||| |||||||||| ||||| ||||||| | |||||| |
|
|
| T |
36034213 |
cagattgtgataccgattttctacgaaatagatccatcacatgtgaggaatcaaattgggagttacaagcaagcctttgcaaagcataagcaaaatttga |
36034114 |
T |
|
| Q |
174 |
agcacaataacgatgagttggagaaatggaaagctgctctcactgatgcagc |
225 |
Q |
| |
|
||||||| || || ||||| |||||| ||||| |||||||||||| ||||| |
|
|
| T |
36034113 |
agcacaacaaagacaagttgcagaaatagaaagatgctctcactgaagcagc |
36034062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 44 - 225
Target Start/End: Complemental strand, 36017337 - 36017156
Alignment:
| Q |
44 |
aagattcttgaatgcaagcaatatatggaacagattgtgatacctgttttttacaacatagatccagcaaatgtgaggaagcagactgggagttaccagc |
143 |
Q |
| |
|
|||||||| ||||||||| || || || ||| ||||||||||| |||| ||| | ||||||||| || |||||||||| || | |||||||||| ||| |
|
|
| T |
36017337 |
aagattctagaatgcaagaaagatcagggacaaattgtgataccgattttctacgaaatagatccatcacatgtgaggaatcaaattgggagttacaagc |
36017238 |
T |
|
| Q |
144 |
aagccttcgcaaaacataagcgagatttgaagcacaataacgatgagttggagaaatggaaagctgctctcactgatgcagc |
225 |
Q |
| |
|
||||||| ||||| |||||| | ||||||||||||| || || ||||| |||||| ||||| |||||||||||| ||||| |
|
|
| T |
36017237 |
aagcctttgcaaagaataagcaaaatttgaagcacaacaaagacaagttgcagaaatagaaagatgctctcactgaagcagc |
36017156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 323 - 474
Target Start/End: Complemental strand, 23474138 - 23473987
Alignment:
| Q |
323 |
aaatcaataaactatatcctatgatttgcaagttttgttttctaatatagcacaatttcctactacacaagtttttcatctccatattcgtgattggaaa |
422 |
Q |
| |
|
|||| |||||||||| || ||| |||| || ||||||||||||||||||||||| | ||||||| ||| |||||||||||| ||| | |||||||| |
|
|
| T |
23474138 |
aaataaataaactatttcatatcatttacatgttttgttttctaatatagcacagctatttactacatgagtctttcatctccattttcttaattggaaa |
23474039 |
T |
|
| Q |
423 |
tgaacataaattttagaaaatgaaagctaaaaatatttttagaaagtaaaca |
474 |
Q |
| |
|
|||||||||||||||||||| || ||||||||| |||| |||| |||||| |
|
|
| T |
23474038 |
tgaacataaattttagaaaacaaacactaaaaataatttttgaaaataaaca |
23473987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 21087380 - 21087310
Alignment:
| Q |
19 |
aaaatggtgcttaaatgagctcaaaaagattcttgaatgcaagcaatatatggaacagattgtgatacctg |
89 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||||||| |||||| |||||| ||||||||||||| |
|
|
| T |
21087380 |
aaaatggtgcttgaatgagctcaaaaagattctagaatgcaagaaatataaggaacaaattgtgatacctg |
21087310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 36004699 - 36004456
Alignment:
| Q |
19 |
aaaatggtgcttaaatgagctcaaaaagattcttgaatgcaagcaatatatggaacagattgtgatacctgttttttacaacatagatccagcaaatgtg |
118 |
Q |
| |
|
|||||||||||| ||||| ||| |||||||| ||||| ||| || || || ||||||||||||||| |||| ||| | ||||||||| || ||||| |
|
|
| T |
36004699 |
aaaatggtgcttgaatgaactcgtcaagattctagaatgtaagaaagatcagggacagattgtgataccgattttctacgaaatagatccatcacatgtg |
36004600 |
T |
|
| Q |
119 |
aggaagcagactgggagttaccagcaagccttcgcaaaacataagcgagatttgaagcacaataacgatgagttggagaaatggaaagctgctctcactg |
218 |
Q |
| |
|
||||| || | ||| ||||| ||||||||| ||||||||| |||||||||||||| || || || ||| |||||||||||| |||||| |||| |
|
|
| T |
36004599 |
aggaatcaaaatggaagttatgggcaagcctttgcaaaacatgcacgagatttgaagcagaacaaagaaatgttaaagaaatggaaagatgctctaactg |
36004500 |
T |
|
| Q |
219 |
atgcagctaatttagttggttgggactctcgaaactataggtaa |
262 |
Q |
| |
|
| ||||| ||||||| || ||| |||||| ||| || |||||| |
|
|
| T |
36004499 |
aagcagccaatttagcagggtggcactctcaaaattacaggtaa |
36004456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 36025460 - 36025351
Alignment:
| Q |
19 |
aaaatggtgcttaaatgagctcaaaaagattcttgaatgcaagcaatatatggaacagattgtgatacctgttttttacaacatagatccagcaaatgtg |
118 |
Q |
| |
|
|||||||||||| ||||| ||| |||||||| ||||||||| || ||| | ||||||||||||||||||||| || | ||||||||| || ||||| |
|
|
| T |
36025460 |
aaaatggtgcttgaatgaactcgtcaagattctagaatgcaagaaagataatggacagattgtgatacctgttttctatgaaatagatccatcacatgtg |
36025361 |
T |
|
| Q |
119 |
aggaagcaga |
128 |
Q |
| |
|
||||| |||| |
|
|
| T |
36025360 |
aggaatcaga |
36025351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 423 - 476
Target Start/End: Complemental strand, 13806039 - 13805986
Alignment:
| Q |
423 |
tgaacataaattttagaaaatgaaagctaaaaatatttttagaaagtaaacaag |
476 |
Q |
| |
|
||||||||||||||||||||||||| | ||||| |||||||||||||||||| |
|
|
| T |
13806039 |
tgaacataaattttagaaaatgaaaattgaaaatgcttttagaaagtaaacaag |
13805986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 19 - 273
Target Start/End: Original strand, 12894733 - 12894987
Alignment:
| Q |
19 |
aaaatggtgcttaaatgagctcaaaaagattcttgaatgcaagcaatat-atggaacagattgtgatacctgttttttacaacatagatccagcaaatgt |
117 |
Q |
| |
|
||||||||| || ||||| ||| |||||||| ||||||||| || || ||||| || ||||||||||||||||||||| | ||||||||| || |||| |
|
|
| T |
12894733 |
aaaatggtgtttgaatgaactcgtcaagattctagaatgcaagaaagatcatgga-caaattgtgatacctgttttttacgaaatagatccatcacatgt |
12894831 |
T |
|
| Q |
118 |
gaggaagcagactgggagttaccagcaagccttcgcaaaacataagcgagatttgaagcacaataacgatgagttggagaaatggaaagctgctctcact |
217 |
Q |
| |
|
|||||| || || ||||| ||| |||||||| |||||||| ||| ||||||||||||| || ||| ||| | |||||||||| |||||||| | |
|
|
| T |
12894832 |
gaggaatcaaacagggaggtacagtcaagcctttgcaaaacacgagcaagatttgaagcacggcaaagatatgttacaaaaatggaaagatgctctcatt |
12894931 |
T |
|
| Q |
218 |
gatgcagctaatttagttggttgggactctcgaaactataggtaagtaaaacgaac |
273 |
Q |
| |
|
|| ||||| ||||||| ||| ||| |||||| ||| || |||||| ||||| |||| |
|
|
| T |
12894932 |
gaagcagccaatttagctgggtggcactctcaaaattacaggtaaataaaatgaac |
12894987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 45301895 - 45301949
Alignment:
| Q |
420 |
aaatgaacataaattttagaaaatgaaagctaaaaatatttttagaaagtaaaca |
474 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
45301895 |
aaatgaacataaattttggaaaatgaaagctgaaaatgtttttagaaagtaaaca |
45301949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 474
Target Start/End: Complemental strand, 11210996 - 11210948
Alignment:
| Q |
426 |
acataaattttagaaaatgaaagctaaaaatatttttagaaagtaaaca |
474 |
Q |
| |
|
|||||||||||||||||| ||| || |||||||||| |||||||||||| |
|
|
| T |
11210996 |
acataaattttagaaaataaaaactgaaaatattttgagaaagtaaaca |
11210948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 479
Target Start/End: Original strand, 39425066 - 39425115
Alignment:
| Q |
430 |
aaattttagaaaatgaaagctaaaaatatttttagaaagtaaacaagccc |
479 |
Q |
| |
|
|||||||||||||||||| || ||||| ||||| ||||||||||||||| |
|
|
| T |
39425066 |
aaattttagaaaatgaaaactgaaaatgattttaaaaagtaaacaagccc |
39425115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 29; Significance: 0.0000008; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 456
Target Start/End: Original strand, 12979147 - 12979183
Alignment:
| Q |
420 |
aaatgaacataaattttagaaaatgaaagctaaaaat |
456 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||| |
|
|
| T |
12979147 |
aaatgaacataaattttagaaaatgaaaactgaaaat |
12979183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 17511349 - 17511400
Alignment:
| Q |
420 |
aaatgaacataaattttagaaaatgaaagctaaaaatatttttagaaagtaaa |
472 |
Q |
| |
|
|||||||||||||||| | ||||||||| || |||||||| |||||||||||| |
|
|
| T |
17511349 |
aaatgaacataaatttaa-aaaatgaaaacttaaaatattattagaaagtaaa |
17511400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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