View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21041_high_10 (Length: 254)
Name: NF21041_high_10
Description: NF21041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21041_high_10 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 39808784 - 39809029
Alignment:
| Q |
9 |
gagaagaataaggaataatgttaattatattcggtgcctaactaactaacacaaaagacaatacaatacacaacacacaaatttgaaccaaaaatgagca |
108 |
Q |
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| T |
39808784 |
gagaagaataaggaataatgttaattatattcggtgcctaactaactaacacaaaagacaacacaatacacaacacacaaatttgaaccaaaaatgagca |
39808883 |
T |
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| Q |
109 |
atatacatcgttcattgcatgtggttctctaacactgcacacaaaacattacataaagataagccatgttgatcatgtaacattcaagaaacatacttca |
208 |
Q |
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| T |
39808884 |
atatacatcgttcattgcatgtggttctctaacactgcacacaaaacattacataaagataagccatgttgatcatgtaacattcaagaaacatacttca |
39808983 |
T |
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| Q |
209 |
tattagaatgagtacttgagtttaagaatattgtaaactgtatagt |
254 |
Q |
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| T |
39808984 |
tattagaatgagtacttgagtttaagaatattgtaaactgtatagt |
39809029 |
T |
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