View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21042_high_22 (Length: 363)

Name: NF21042_high_22
Description: NF21042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21042_high_22
NF21042_high_22
[»] chr3 (21 HSPs)
chr3 (126-360)||(4539865-4540099)
chr3 (199-354)||(39430275-39430430)
chr3 (251-360)||(25102024-25102132)
chr3 (202-354)||(47849918-47850070)
chr3 (232-334)||(52859543-52859645)
chr3 (300-360)||(25134179-25134239)
chr3 (227-351)||(47069238-47069360)
chr3 (222-345)||(19961158-19961280)
chr3 (197-345)||(37919182-37919329)
chr3 (300-340)||(42891047-42891087)
chr3 (232-354)||(44418467-44418589)
chr3 (227-360)||(47006605-47006738)
chr3 (226-354)||(18030003-18030131)
chr3 (265-360)||(55158486-55158579)
chr3 (30-65)||(42555551-42555586)
chr3 (306-360)||(35306617-35306671)
chr3 (306-360)||(46892448-46892502)
chr3 (224-346)||(47499388-47499510)
chr3 (303-360)||(25096291-25096348)
chr3 (201-346)||(28787693-28787837)
chr3 (280-353)||(48192639-48192712)
[»] chr2 (21 HSPs)
chr2 (200-360)||(44068774-44068934)
chr2 (202-347)||(30549081-30549226)
chr2 (202-360)||(25626482-25626640)
chr2 (199-352)||(14275772-14275925)
chr2 (202-363)||(9950275-9950436)
chr2 (199-360)||(32294501-32294662)
chr2 (202-334)||(29877009-29877141)
chr2 (199-334)||(15079863-15079998)
chr2 (204-288)||(13487699-13487783)
chr2 (199-334)||(7743716-7743851)
chr2 (226-360)||(20061073-20061207)
chr2 (226-354)||(39420211-39420339)
chr2 (255-334)||(43451751-43451829)
chr2 (223-329)||(13349703-13349809)
chr2 (226-360)||(2889115-2889249)
chr2 (270-347)||(7061546-7061623)
chr2 (199-351)||(409917-410068)
chr2 (202-288)||(27465400-27465485)
chr2 (225-339)||(36278318-36278431)
chr2 (255-340)||(41890033-41890118)
chr2 (278-346)||(25626319-25626387)
[»] chr5 (12 HSPs)
chr5 (199-353)||(554279-554433)
chr5 (226-329)||(29557512-29557615)
chr5 (220-360)||(10523664-10523804)
chr5 (264-354)||(41144637-41144727)
chr5 (201-340)||(12212178-12212317)
chr5 (255-354)||(14547838-14547937)
chr5 (243-331)||(16627294-16627382)
chr5 (225-359)||(967573-967708)
chr5 (249-353)||(12000041-12000144)
chr5 (249-360)||(24519441-24519553)
chr5 (300-340)||(40845819-40845859)
chr5 (303-343)||(2352205-2352245)
[»] chr8 (18 HSPs)
chr8 (199-354)||(8114295-8114450)
chr8 (199-353)||(13948962-13949116)
chr8 (202-329)||(42685749-42685876)
chr8 (199-360)||(6530315-6530476)
chr8 (255-360)||(41602414-41602519)
chr8 (199-340)||(15067601-15067742)
chr8 (201-340)||(13933042-13933181)
chr8 (255-354)||(40505301-40505400)
chr8 (252-354)||(35865147-35865249)
chr8 (255-360)||(31313316-31313421)
chr8 (265-354)||(8769054-8769144)
chr8 (255-360)||(21372452-21372557)
chr8 (284-360)||(5493362-5493438)
chr8 (300-346)||(26014413-26014459)
chr8 (243-335)||(7774630-7774722)
chr8 (243-335)||(7791277-7791369)
chr8 (243-335)||(7811861-7811953)
chr8 (199-271)||(31592331-31592403)
[»] chr7 (11 HSPs)
chr7 (255-354)||(28337219-28337318)
chr7 (199-354)||(26080964-26081119)
chr7 (199-354)||(26104751-26104906)
chr7 (226-351)||(32546725-32546849)
chr7 (198-360)||(32786799-32786961)
chr7 (204-350)||(2033629-2033775)
chr7 (218-345)||(31399302-31399427)
chr7 (298-346)||(7458001-7458049)
chr7 (199-340)||(47990934-47991075)
chr7 (237-353)||(47390545-47390661)
chr7 (232-340)||(31054198-31054310)
[»] chr4 (19 HSPs)
chr4 (202-360)||(27918330-27918488)
chr4 (251-349)||(38705765-38705863)
chr4 (192-322)||(29818440-29818570)
chr4 (200-353)||(14138991-14139144)
chr4 (251-348)||(54719665-54719762)
chr4 (265-353)||(42051169-42051257)
chr4 (198-360)||(22019398-22019560)
chr4 (255-354)||(36989848-36989948)
chr4 (199-313)||(29508720-29508834)
chr4 (277-346)||(36937484-36937553)
chr4 (277-360)||(1961619-1961702)
chr4 (204-331)||(9791245-9791371)
chr4 (207-345)||(40311677-40311815)
chr4 (207-345)||(40321753-40321891)
chr4 (224-288)||(3970331-3970395)
chr4 (280-360)||(50297709-50297789)
chr4 (298-340)||(41459977-41460019)
chr4 (199-268)||(30033475-30033544)
chr4 (198-275)||(36937122-36937199)
[»] chr1 (17 HSPs)
chr1 (226-360)||(11017960-11018094)
chr1 (201-339)||(4084728-4084866)
chr1 (232-360)||(1035577-1035705)
chr1 (199-345)||(16394849-16394995)
chr1 (199-354)||(31262573-31262729)
chr1 (277-360)||(25366744-25366827)
chr1 (201-360)||(28490492-28490650)
chr1 (198-360)||(41884609-41884771)
chr1 (276-353)||(37316642-37316719)
chr1 (207-360)||(16583164-16583317)
chr1 (224-327)||(26176325-26176428)
chr1 (243-349)||(36012451-36012557)
chr1 (316-360)||(8644801-8644845)
chr1 (254-348)||(3895928-3896022)
chr1 (226-360)||(31635450-31635584)
chr1 (298-346)||(950079-950127)
chr1 (265-329)||(15281371-15281435)
[»] scaffold0181 (1 HSPs)
scaffold0181 (208-340)||(10745-10877)
[»] chr6 (6 HSPs)
chr6 (201-354)||(6469543-6469696)
chr6 (238-346)||(30249167-30249275)
chr6 (226-334)||(1065623-1065731)
chr6 (264-334)||(29286004-29286074)
chr6 (196-360)||(3787437-3787601)
chr6 (298-351)||(14215157-14215210)
[»] scaffold0542 (1 HSPs)
scaffold0542 (199-360)||(4524-4684)
[»] scaffold0116 (2 HSPs)
scaffold0116 (252-346)||(3006-3100)
scaffold0116 (199-346)||(5991-6141)
[»] scaffold0482 (1 HSPs)
scaffold0482 (243-335)||(544-636)


Alignment Details
Target: chr3 (Bit Score: 179; Significance: 2e-96; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 126 - 360
Target Start/End: Complemental strand, 4540099 - 4539865
Alignment:
Q  126 agaggaaggttttgtcttatgattgtgaaagagaagtgcacggttatcgagtatttccaatttagtaattattgggtcatgttaacttgtgttttaaaga 225  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4540099 agagaaaggttttgtcttatgattgtgaaagagaagagcacggttagtgagtatttccaatttagtaattattgggtcatgttaacttgtgttttaaagg 4540000  T
Q  226 cacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttcta 325  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||| |||||||||| |||||||||||| ||    
T  4539999 cacatgttaaggaactcaaaatgaacaattttgcattgaaaaacatgataatttaacttttaagaagttgattgcacgatttttaatacatatattttta 4539900  T
Q  326 taatgagtttcttaatatgtgcccttgagagcaca 360  Q
    ||||||||||||||| ||||||| |||||||||||    
T  4539899 taatgagtttcttaacatgtgcctttgagagcaca 4539865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 199 - 354
Target Start/End: Complemental strand, 39430430 - 39430275
Alignment:
Q  199 gggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgatt 298  Q
    |||||||||||||||||||  ||| |||| || ||||||||||||||| || ||| ||||||||| |||| || ||| |||||||||| | ||| ||| |    
T  39430430 gggtcatgttaacttgtgtcctaaggacatatgttaaggaactcaaaaagagcaactttgcattggaaaacataatattttaactttttagaagttgact 39430331  T
Q  299 acacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgag 354  Q
     ||||| ||||||||||||| |||||||||||||||  |||| ||| |||||||||    
T  39430330 gcacgacttttgatacatatgtttctataatgagttctttaagatgcgcccttgag 39430275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 25102024 - 25102132
Alignment:
Q  251 caattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgccct 350  Q
    |||||||| |||||||||||||||| |||||||||| | ||| | | ||||| ||||||||||||||||||||||||||||| | ||||| || ||||||    
T  25102024 caattttgtattgaaaaatatgatattttaacttttgagaagttaaatacacaatttttgatacatatatttctataatgag-tccttaacatatgccct 25102122  T
Q  351 tgagagcaca 360  Q
    |||| |||||    
T  25102123 tgagggcaca 25102132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 202 - 354
Target Start/End: Original strand, 47849918 - 47850070
Alignment:
Q  202 tcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattaca 301  Q
    ||||||||||||||||| ||| ||  |||  |||||||   ||||  | ||| ||||||||||||||||| ||| ||||| ||||||||||  || | ||    
T  47849918 tcatgttaacttgtgttctaaggatgcatgctaaggaatctaaaaaaagcaactttgcattgaaaaatataatattttaatttttaaaaagtcgaatgca 47850017  T
Q  302 cgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgag 354  Q
     || |||||||| |||||||||||||||||||| ||||| ||||| |||||||    
T  47850018 tgaattttgatagatatatttctataatgagttccttaacatgtgtccttgag 47850070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 334
Target Start/End: Original strand, 52859543 - 52859645
Alignment:
Q  232 ttaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatga 331  Q
    |||||||||||||||||||||||||||||| | |||| |||||| |||||||||||| ||| ||| | ||||  || | | || |||||||||| |||||    
T  52859543 ttaaggaactcaaaatgaacaattttgcatcggaaaacatgatagtttaacttttaagaagttgactgcacgtcttataacacgtatatttctacaatga 52859642  T
Q  332 gtt 334  Q
    |||    
T  52859643 gtt 52859645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 300 - 360
Target Start/End: Original strand, 25134179 - 25134239
Alignment:
Q  300 cacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
    ||||| ||||||||||||||||||||||||||||| ||||| ||||| | |||||||||||    
T  25134179 cacgacttttgatacatatatttctataatgagttccttaacatgtgtctttgagagcaca 25134239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 351
Target Start/End: Original strand, 47069238 - 47069360
Alignment:
Q  227 acatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctat 326  Q
    |||| |||||||||  ||||||| ||||||  ||||||||||||||||||||| |||||| ||||| ||| | ||||| ||||||||  |||||||| ||    
T  47069238 acatgttaaggaacctaaaatgagcaattta-cattgaaaaatatgataatttgactttt-aaaagttgactgcacgacttttgatatgtatatttccat 47069335  T
Q  327 aatgagtttcttaatatgtgccctt 351  Q
    ||| | || ||||| ||||||||||    
T  47069336 aataaattccttaaaatgtgccctt 47069360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 345
Target Start/End: Complemental strand, 19961280 - 19961158
Alignment:
Q  222 aagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatt 321  Q
    ||||||||| ||||||||   |||||||||||||||| |||| |||| || ||| |||||||| | | ||| ||| ||||| | ||||||||| ||||||    
T  19961280 aagacacatgttaaggaatctaaaatgaacaattttgtattggaaaacataatattttaacttct-agaagttgaatacacaacttttgatacgtatatt 19961182  T
Q  322 tctataatgagtttcttaatatgt 345  Q
    |||||||| |||| ||||| ||||    
T  19961181 tctataattagttccttaacatgt 19961158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 197 - 345
Target Start/End: Complemental strand, 37919329 - 37919182
Alignment:
Q  197 ttgggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctga 296  Q
    ||||||||||||||||||| | || | |  |||| ||||| |||  |||| |||||| ||| ||||| |||| || |||  | ||||||||| ||| |||    
T  37919329 ttgggtcatgttaacttgtttcttcagggtacatgttaagcaacataaaa-gaacaactttacattggaaaacataatatgtcaacttttaagaagttga 37919231  T
Q  297 ttacacgatttttgatacatatatttctataatgagtttcttaatatgt 345  Q
     | ||| ||||||||||| ||||||| ||||||||||||||||| ||||    
T  37919230 atgcacaatttttgatacgtatatttatataatgagtttcttaacatgt 37919182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 300 - 340
Target Start/End: Complemental strand, 42891087 - 42891047
Alignment:
Q  300 cacgatttttgatacatatatttctataatgagtttcttaa 340  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  42891087 cacgattttcgatacatatatttctataatgagtttcttaa 42891047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 44418589 - 44418467
Alignment:
Q  232 ttaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatga 331  Q
    ||||| ||||||||| | |||| ||||||||||||||||| |||  ||||||||||| ||| | | | ||||| |||| || | |||  |||| |||| |    
T  44418589 ttaagtaactcaaaaaggacaactttgcattgaaaaatataatatattaacttttaagaagttaaatgcacgactttttatgcgtatgcttctttaataa 44418490  T
Q  332 gtttcttaatatgtgcccttgag 354  Q
    ||| |||||||||||| ||||||    
T  44418489 gttccttaatatgtgctcttgag 44418467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 360
Target Start/End: Complemental strand, 47006738 - 47006605
Alignment:
Q  227 acatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctat 326  Q
    |||| ||||||||| |||||  | ||| ||||||||| |||| || | | ||||| |||||| ||| ||| | ||||| ||||||| |  ||||||||||    
T  47006738 acatgttaaggaacccaaaaaaagcaactttgcattggaaaacataacattttaaattttaagaagttgaatgcacgacttttgatgcgaatatttctat 47006639  T
Q  327 aatgagtttcttaatatgtgcccttgagagcaca 360  Q
    ||  |||| ||||| ||||||||||||| |||||    
T  47006638 aaaaagttccttaacatgtgcccttgagggcaca 47006605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 354
Target Start/End: Complemental strand, 18030131 - 18030003
Alignment:
Q  226 cacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttcta 325  Q
    ||||| |||||||||  |||| ||  || ||||||||| ||||||| ||| ||| |||||||| ||  ||| | ||||| ||||  |||||||||||||     
T  18030131 cacatgttaaggaacctaaaaagagtaactttgcattggaaaatataatattttgacttttaagaaattgaatgcacgacttttcgtacatatatttctt 18030032  T
Q  326 taatgagtttcttaatatgtgcccttgag 354  Q
    || | |||| ||||| |||||||||||||    
T  18030031 tattaagttccttaacatgtgcccttgag 18030003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 360
Target Start/End: Original strand, 55158486 - 55158579
Alignment:
Q  265 aaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
    |||||||||| ||||||||||||| ||| ||||| |||||  ||| |||  |||||||||||||| | |||||||| ||||||  ||||| |||||    
T  55158486 aaaatatgatgatttaacttttaagaagttgattgcacga--tttaatatgtatatttctataataaatttcttaacatgtgctattgagggcaca 55158579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 65
Target Start/End: Original strand, 42555551 - 42555586
Alignment:
Q  30 aattgtatcttggaggatgcaagtgatccttttata 65  Q
    |||||||||||||||||||||||||||||| |||||    
T  42555551 aattgtatcttggaggatgcaagtgatcctcttata 42555586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 360
Target Start/End: Original strand, 35306617 - 35306671
Alignment:
Q  306 ttttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
    ||||||||  |||||||||||||||||||| |||| || |||||||||| |||||    
T  35306617 ttttgataagtatatttctataatgagtttgttaacatatgcccttgagggcaca 35306671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 360
Target Start/End: Complemental strand, 46892502 - 46892448
Alignment:
Q  306 ttttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
    |||| |||| ||||||||||||| || ||||||||||||| ||||| ||||||||    
T  46892502 ttttaatacttatatttctataacgaatttcttaatatgtacccttaagagcaca 46892448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 346
Target Start/End: Original strand, 47499388 - 47499510
Alignment:
Q  224 gacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttc 323  Q
    ||||| ||||||| |||  |||| ||||||||||  |||  ||||||| |||  | ||||||||||||| ||| | ||| | |||| |||| |||||||     
T  47499388 gacacgtattaagcaacataaaaagaacaattttatattagaaaatataatatatgaacttttaaaaagttgaattcacaacttttaatacgtatatttt 47499487  T
Q  324 tataatgagtttcttaatatgtg 346  Q
    |||||||| |||||||| |||||    
T  47499488 tataatgaatttcttaacatgtg 47499510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 25096348 - 25096291
Alignment:
Q  303 gatttttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
    ||||||| || | ||||||||||||||||||| ||||| ||||||| ||||| |||||    
T  25096348 gattttttatgcgtatatttctataatgagttccttaacatgtgcctttgagggcaca 25096291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 346
Target Start/End: Complemental strand, 28787837 - 28787693
Alignment:
Q  201 gtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattac 300  Q
    |||||| |||||||||   ||||||||| | ||| ||||| |||||  ||||| |||||||||||| | || | | ||||| ||||||| || | | |||    
T  28787837 gtcatgctaacttgtgccctaaagacacttgttacggaacccaaaaa-aacaactttgcattgaaatacataacattttaatttttaaatagtttaatac 28787739  T
Q  301 acgatttttgatacatatatttctataatgagtttcttaatatgtg 346  Q
    || | |||| |||| ||||||| ||||||||||| ||||| |||||    
T  28787738 acaacttttaatacgtatatttttataatgagttccttaagatgtg 28787693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 353
Target Start/End: Original strand, 48192639 - 48192712
Alignment:
Q  280 aacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttga 353  Q
    ||||||||| ||| ||| | | |||||||| |||  |||||||||||||| |||||||||| ||||| ||||||    
T  48192639 aacttttaagaagttgaatgcgcgatttttaataagtatatttctataataagtttcttaacatgtgtccttga 48192712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 5e-38; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 200 - 360
Target Start/End: Original strand, 44068774 - 44068934
Alignment:
Q  200 ggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgatta 299  Q
    |||||||||||||||||   ||| | ||||| ||||||||   ||||||||||| |||||||||||||| ||||||||||||||||||| ||| |||||     
T  44068774 ggtcatgttaacttgtgccctaagggcacatgttaaggaatctaaaatgaacaactttgcattgaaaaacatgataatttaacttttaagaagttgattg 44068873  T
Q  300 cacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
    ||||| |||||||||||||||||||||||||| || ||||| ||||| | |||||||||||    
T  44068874 cacgacttttgatacatatatttctataatgaattccttaacatgtgtctttgagagcaca 44068934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 202 - 347
Target Start/End: Complemental strand, 30549226 - 30549081
Alignment:
Q  202 tcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattaca 301  Q
    ||||||||||||||| | |||||  |||| |||||||||| ||||||| ||| |||||||| ||||| ||||||||||||| ||||| ||| ||||| ||    
T  30549226 tcatgttaacttgtgctctaaaggaacatgttaaggaacttaaaatgagcaaatttgcattaaaaaacatgataatttaacgtttaagaagttgattgca 30549127  T
Q  302 cgatttttgatacatatatttctataatgagtttcttaatatgtgc 347  Q
    ||| ||||||||| ||||||||||||| ||||| ||||| ||||||    
T  30549126 cgacttttgatacgtatatttctataaagagttccttaacatgtgc 30549081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 202 - 360
Target Start/End: Complemental strand, 25626640 - 25626482
Alignment:
Q  202 tcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattaca 301  Q
    |||||||||||||||   ||| | ||||| |||||||||  ||||||||||| |||| |||| |||| ||||||||||||||||||| ||| ||| ||||    
T  25626640 tcatgttaacttgtgccctaagggcacatgttaaggaacctaaaatgaacaactttgaattggaaaacatgataatttaacttttaagaagttgactaca 25626541  T
Q  302 cgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
    ||| ||||||||| |||||||| ||||| ||||  |||| |||||| |||||| |||||    
T  25626540 cgacttttgatacgtatatttcaataataagttctttaacatgtgctcttgagggcaca 25626482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 199 - 352
Target Start/End: Complemental strand, 14275925 - 14275772
Alignment:
Q  199 gggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgatt 298  Q
    |||||||| ||||||||    ||||| ||||||||||| ||| ||||| || ||||||||||||| |||| || |||  ||||||||||| ||| ||| |    
T  14275925 gggtcatgctaacttgttccctaaaggcacatattaagcaacccaaaaagagcaattttgcattggaaaacataatatattaacttttaagaagttgaat 14275826  T
Q  299 acacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttg 352  Q
     || || ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  14275825 gcatgacttttgatacgtatatttctataatgagttccttaatatgtgcccttg 14275772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 363
Target Start/End: Complemental strand, 9950436 - 9950275
Alignment:
Q  202 tcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattaca 301  Q
    ||||| ||||||||||| ||| | ||||| |||| |||| | ||| ||  || ||||||||| |||| || ||| |||||||||| ||||| ||| | ||    
T  9950436 tcatgctaacttgtgttctaagggcacatgttaaagaacccgaaaagaggaactttgcattggaaaacataatattttaactttttaaaagttgactgca 9950337  T
Q  302 cgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcacatgt 363  Q
    ||| ||||  ||| |||||||||||||| | || |||||||||||||||| |||||||||||    
T  9950336 cgacttttagtacgtatatttctataataaattccttaatatgtgcccttaagagcacatgt 9950275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 360
Target Start/End: Original strand, 32294501 - 32294662
Alignment:
Q  199 gggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgatt 298  Q
    |||||||| |||||||||   ||||| ||||| |||| ||||  |||| || ||| ||| ||||| |||| || ||| ||| |||||| | ||| ||| |    
T  32294501 gggtcatgctaacttgtgccctaaaggcacatgttaaagaacctaaaaagagcaaatttacattggaaaacataatagtttgacttttcagaagttgaat 32294600  T
Q  299 acacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
     ||||| |||| |||||||||||||||||||||||| ||||| ||||||||||||| |||||    
T  32294601 gcacgacttttaatacatatatttctataatgagttccttaacatgtgcccttgagggcaca 32294662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 202 - 334
Target Start/End: Original strand, 29877009 - 29877141
Alignment:
Q  202 tcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattaca 301  Q
    ||||||||||||||||| ||| |  |||| ||||| || | ||||| | ||||||||||||||||||||| |||||||||||||| | ||  ||| | ||    
T  29877009 tcatgttaacttgtgttctaagggtacatgttaagaaatttaaaataagcaattttgcattgaaaaatattataatttaacttttgagaaattgactgca 29877108  T
Q  302 cgatttttgatacatatatttctataatgagtt 334  Q
    ||| |||| |||||| ||||| |||||||||||    
T  29877109 cgacttttaatacatttatttttataatgagtt 29877141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 15079998 - 15079863
Alignment:
Q  199 gggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgatt 298  Q
    |||||||||||||||||||  ||| ||||| | ||||| |||  |||| || ||||||| ||||||||||||||||| |||||||||||| ||| ||| |    
T  15079998 gggtcatgttaacttgtgtcctaaggacacgtgttaagaaacctaaaaagagcaattttacattgaaaaatatgatagtttaacttttaagaagttgaat 15079899  T
Q  299 acacgatttttgatacatatatttctataatgagtt 334  Q
     ||||| ||||| ||  ||||||||||  |||||||    
T  15079898 gcacgacttttgctatgtatatttctactatgagtt 15079863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 13487699 - 13487783
Alignment:
Q  204 atgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaa 288  Q
    ||||||||||||||| ||| | ||||| |||||||||||||||  ||||||||| |||||||||| || ||| ||||||||||||    
T  13487699 atgttaacttgtgttctaagggcacatgttaaggaactcaaaaataacaattttacattgaaaaacataatattttaacttttaa 13487783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 7743716 - 7743851
Alignment:
Q  199 gggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgatt 298  Q
    |||||||||||| |||||| |||| | || || ||||| ||| |||||||| ||| ||||||  | |||| ||| ||||||||||||||| ||| | | |    
T  7743716 gggtcatgttaatttgtgtcttaagggcatatgttaagaaacccaaaatgagcaactttgcacgggaaaacatggtaatttaacttttaagaagttaact 7743815  T
Q  299 acacgatttttgatacatatatttctataatgagtt 334  Q
     ||||| ||| ||| |||||||||||||||||||||    
T  7743816 gcacgactttcgatgcatatatttctataatgagtt 7743851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 360
Target Start/End: Original strand, 20061073 - 20061207
Alignment:
Q  226 cacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttcta 325  Q
    ||||| ||||| |||  |||| || ||| |||||||||||||| || |||  | ||||||||| ||| ||| | ||| | ||||||||| ||||||||||    
T  20061073 cacatgttaagcaacctaaaaagagcaactttgcattgaaaaacataatatgtcaacttttaagaagttgaatgcacaacttttgatacgtatatttcta 20061172  T
Q  326 taatgagtttcttaatatgtgcccttgagagcaca 360  Q
    ||||||||| ||||  ||||||||||||| |||||    
T  20061173 taatgagttccttagcatgtgcccttgagggcaca 20061207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 354
Target Start/End: Original strand, 39420211 - 39420339
Alignment:
Q  226 cacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttcta 325  Q
    ||||| |||||||||  |||| || ||| ||||||||| |||| || ||| ||||||||| || ||| ||| | |||||  ||| |||  ||||||||||    
T  39420211 cacatgttaaggaacctaaaaagagcaactttgcattggaaaacataatattttaactttcaagaagttgaatgcacgacatttaatatgtatatttcta 39420310  T
Q  326 taatgagtttcttaatatgtgcccttgag 354  Q
    ||||||||| ||||| |||||||||||||    
T  39420311 taatgagttccttaacatgtgcccttgag 39420339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 334
Target Start/End: Complemental strand, 43451829 - 43451751
Alignment:
Q  255 tttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtt 334  Q
    |||||||| |||||||| ||| |||||||||||| ||| |||||||||||||||| |||||| ||||| |||||| ||||    
T  43451829 tttgcatt-aaaaatataatattttaacttttaagaagttgattacacgatttttaatacatgtatttatataataagtt 43451751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 329
Target Start/End: Complemental strand, 13349809 - 13349703
Alignment:
Q  223 agacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatattt 322  Q
    ||||||||||||||||||| | ||  ||||| |||  |||||||||||| ||| |||||||||||||||  ||| |  |||| ||||||||| |||||||    
T  13349809 agacacatattaaggaacttagaaaaaacaactttatattgaaaaatataatattttaacttttaaaaaattgaatgtacgacttttgatacttatattt 13349710  T
Q  323 ctataat 329  Q
     ||||||    
T  13349709 ttataat 13349703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 360
Target Start/End: Complemental strand, 2889249 - 2889115
Alignment:
Q  226 cacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttcta 325  Q
    ||||| |||||||| | |||| ||  ||||||| |||||||||||||| | ||| |||||||| ||| ||| |  |||| ||||||||  | ||||| ||    
T  2889249 cacatgttaaggaatttaaaaagaggaattttgtattgaaaaatatgaaattttgacttttaagaagttgaatgtacgaattttgatatgtgtattttta 2889150  T
Q  326 taatgagtttcttaatatgtgcccttgagagcaca 360  Q
    |||| ||||  |||| ||||||||||||| |||||    
T  2889149 taataagttcattaacatgtgcccttgagggcaca 2889115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 347
Target Start/End: Complemental strand, 7061623 - 7061546
Alignment:
Q  270 atgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgc 347  Q
    |||||| |||||||||| | ||| | ||||||||| ||||||| |||||||||||||||| ||||  |||| ||||||    
T  7061623 atgatattttaactttttagaagtttattacacgacttttgatgcatatatttctataataagttctttaacatgtgc 7061546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 351
Target Start/End: Complemental strand, 410068 - 409917
Alignment:
Q  199 gggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgatt 298  Q
    ||||||||||||||||||   ||| | ||||| |||||||||  ||||| | ||| |||||||| ||||  ||  ||||||||||||| | ||| ||| |    
T  410068 gggtcatgttaacttgtgccctaagggcacatgttaaggaacctaaaataagcaactttgcattcaaaac-atcgtaatttaacttttgagaagttgact 409970  T
Q  299 acacgatttttgatacatatatttctataatgagtttcttaatatgtgccctt 351  Q
     ||||| ||||||||  | ||||||||||| ||||| ||||| || |||||||    
T  409969 gcacgacttttgataagtttatttctataacgagttccttaacatatgccctt 409917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 27465485 - 27465400
Alignment:
Q  202 tcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaa 288  Q
    ||||||||||||||||  ||| |||||||||||| ||| | ||||  ||||| |||| |||||||||||  ||| ||||||||||||    
T  27465485 tcatgttaacttgtgtcataa-gacacatattaaagaatttaaaaaaaacaactttgtattgaaaaataaaatattttaacttttaa 27465400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 339
Target Start/End: Original strand, 36278318 - 36278431
Alignment:
Q  225 acacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttct 324  Q
    |||||| |||||||||  |||| || ||| |||| |||| ||||||| ||| ||||| |||||||||| | | |  ||||||||| |||  |||||| ||    
T  36278318 acacatgttaaggaacctaaaaagagcaactttgtattggaaaatataatattttaatttttaaaaagttaaatggacgattttttatatttatatt-ct 36278416  T
Q  325 ataatgagtttctta 339  Q
    |||||||||||||||    
T  36278417 ataatgagtttctta 36278431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 340
Target Start/End: Original strand, 41890033 - 41890118
Alignment:
Q  255 tttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaa 340  Q
    ||||||||| |||| || | | ||||| |||||| ||| ||| | ||||| ||||||| | |||||||||||||| ||||||||||    
T  41890033 tttgcattggaaaacataacattttaatttttaagaagttgaatgcacgacttttgatgcgtatatttctataataagtttcttaa 41890118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 346
Target Start/End: Original strand, 25626319 - 25626387
Alignment:
Q  278 ttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtg 346  Q
    ||||||||||| ||| ||| |  |||| ||||||||| |||||||||||||| |||| ||||| |||||    
T  25626319 ttaacttttaagaagttgaatgtacgacttttgatacgtatatttctataataagttccttaacatgtg 25626387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 199 - 353
Target Start/End: Original strand, 554279 - 554433
Alignment:
Q  199 gggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgatt 298  Q
    |||| ||||||||||||||  |||   ||||| ||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |    
T  554279 gggtgatgttaacttgtgtcctaagagcacatgttaagaaatccaaaatgaacaattttgcattggaaaatatgataatttaacttttaaaaagttgact 554378  T
Q  299 acacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttga 353  Q
     ||||  |||| |||||||||||||||||||||||| ||||| |||||| |||||    
T  554379 gcacggcttttaatacatatatttctataatgagttccttaacatgtgctcttga 554433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 226 - 329
Target Start/End: Complemental strand, 29557615 - 29557512
Alignment:
Q  226 cacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttcta 325  Q
    ||||| ||||||||| |||||||| ||| |||| |||| |||| ||||||||||||||||||||||  | | ||||||| ||||||||||||||||||||    
T  29557615 cacatgttaaggaacccaaaatgagcaactttgtattggaaaacatgataatttaacttttaaaaatttaactacacgacttttgatacatatatttcta 29557516  T
Q  326 taat 329  Q
    ||||    
T  29557515 taat 29557512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 220 - 360
Target Start/End: Complemental strand, 10523804 - 10523664
Alignment:
Q  220 taaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatata 319  Q
    |||||||| || |||||||| |||||| ||||||||||  ||||  ||| || ||| |||||||||||| ||  ||| | ||||| ||||||||| ||||    
T  10523804 taaagacatatgttaaggaattcaaaaagaacaattttatattggtaaacataatagtttaacttttaagaaattgaatgcacgacttttgatacgtata 10523705  T
Q  320 tttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
    ||||||||||||||| ||||| |||||| ||  ||||||||    
T  10523704 tttctataatgagttccttaacatgtgctctcaagagcaca 10523664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 264 - 354
Target Start/End: Original strand, 41144637 - 41144727
Alignment:
Q  264 aaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgag 354  Q
    |||||||| | | |||||||||||||||| ||| | ||||| ||||||||  ||||||||||||||||||| ||||| |||||||||||||    
T  41144637 aaaaatataacagtttaacttttaaaaagttgaatgcacgacttttgatatgtatatttctataatgagttccttaacatgtgcccttgag 41144727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 201 - 340
Target Start/End: Original strand, 12212178 - 12212317
Alignment:
Q  201 gtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattac 300  Q
    ||||||||||||| |||  ||| ||||| | |||| |||||||||| ||  || |||||||||||||| || ||| ||||| ||||||| || ||| ||     
T  12212178 gtcatgttaacttatgtcctaatgacacgtgttaaagaactcaaaaagagtaactttgcattgaaaaacataatattttaatttttaaagagttgactat 12212277  T
Q  301 acgatttttgatacatatatttctataatgagtttcttaa 340  Q
    |||| |||| |||  |||||||||||||||||||| ||||    
T  12212278 acgaattttaatatgtatatttctataatgagtttgttaa 12212317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 255 - 354
Target Start/End: Complemental strand, 14547937 - 14547838
Alignment:
Q  255 tttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgag 354  Q
    |||||||||||| ||||||||||||||||||||| ||  | | | ||||| ||||||| | ||||||||||||| || || ||||| |||||||||||||    
T  14547937 tttgcattgaaagatatgataatttaacttttaataaattaactgcacgacttttgatgcgtatatttctataaggaattccttaacatgtgcccttgag 14547838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 331
Target Start/End: Original strand, 16627294 - 16627382
Alignment:
Q  243 aaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatga 331  Q
    ||||||| ||||||||||||  |||| ||  || |||||||||||||||| ||| | ||||| |||| |||||||||||| ||||||||    
T  16627294 aaaatgatcaattttgcattagaaaacatagtattttaacttttaaaaagttgaatgcacgacttttaatacatatatttttataatga 16627382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 359
Target Start/End: Complemental strand, 967708 - 967573
Alignment:
Q  225 acacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaa-gctgattacacgatttttgatacatatatttc 323  Q
    |||||| ||||| |||  |||| ||| ||||||| ||| ||||  || ||| ||||||||||||||| | ||  | ||| | |||| |||||||||||||    
T  967708 acacatcttaagaaacctaaaaagaataattttgtattaaaaatcataatattttaacttttaaaaaagttggatgcaccacttttaatacatatatttc 967609  T
Q  324 tataatgagtttcttaatatgtgcccttgagagcac 359  Q
    |||||||| || ||||| ||||||||||||| ||||    
T  967608 tataatgaattccttaacatgtgcccttgagggcac 967573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 353
Target Start/End: Original strand, 12000041 - 12000144
Alignment:
Q  249 aacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgcc 348  Q
    ||||||||||||||| ||||||| | | ||||| ||| |||||  ||| | |||||||||| || | ||||||||||||| |||||  |||| |||||||    
T  12000041 aacaattttgcattggaaaatataacattttaaattt-aaaaatttgaatgcacgattttttatgcgtatatttctataacgagttcgttaacatgtgcc 12000139  T
Q  349 cttga 353  Q
    |||||    
T  12000140 cttga 12000144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 360
Target Start/End: Original strand, 24519441 - 24519553
Alignment:
Q  249 aacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaa-tatgtgc 347  Q
    ||||| ||||||||||||||||| | |  | ||||||||| ||| ||| | ||||| || ||||||| ||||| ||||||| | ||| ||||  ||||||    
T  24519441 aacaactttgcattgaaaaatataacatgtcaacttttaagaagttgaatgcacgacttgtgatacaaatattcctataataaattttttaacaatgtgc 24519540  T
Q  348 ccttgagagcaca 360  Q
    |||||||||||||    
T  24519541 ccttgagagcaca 24519553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 340
Target Start/End: Complemental strand, 40845859 - 40845819
Alignment:
Q  300 cacgatttttgatacatatatttctataatgagtttcttaa 340  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  40845859 cacgatttttgatacatatatttttataatgagttccttaa 40845819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 343
Target Start/End: Complemental strand, 2352245 - 2352205
Alignment:
Q  303 gatttttgatacatatatttctataatgagtttcttaatat 343  Q
    |||||||||||| | ||||| ||||||||||||||||||||    
T  2352245 gatttttgatacgtttatttatataatgagtttcttaatat 2352205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 199 - 354
Target Start/End: Original strand, 8114295 - 8114450
Alignment:
Q  199 gggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgatt 298  Q
    ||||||||||||||||||   ||| | ||||| |||||||| | ||||||| |||||||||||| ||||| |||||||||||| |||||||||  ||| |    
T  8114295 gggtcatgttaacttgtgccctaagggcacatgttaaggaatttaaaatgagcaattttgcattaaaaaacatgataatttaatttttaaaaaattgact 8114394  T
Q  299 acacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgag 354  Q
     ||||| |||| |||||||||||| ||||||||||||||||| |||||| ||||||    
T  8114395 gcacgacttttaatacatatatttttataatgagtttcttaacatgtgctcttgag 8114450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 199 - 353
Target Start/End: Complemental strand, 13949116 - 13948962
Alignment:
Q  199 gggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaac-ttttaaaaagctgat 297  Q
    |||||||||||||||||||  ||||  ||||| |||||||||  ||||||| ||| |||  ||| ||||| ||||||||||||| |||||| ||  |||     
T  13949116 gggtcatgttaacttgtgtcctaaaagcacatgttaaggaacgtaaaatgagcaactttatattaaaaaacatgataatttaactttttaagaaattgac 13949017  T
Q  298 tacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttga 353  Q
    ||||||| ||||| ||| |||||||||||||| |||||||||| ||||||| ||||    
T  13949016 tacacgacttttg-tacgtatatttctataataagtttcttaacatgtgccattga 13948962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 202 - 329
Target Start/End: Complemental strand, 42685876 - 42685749
Alignment:
Q  202 tcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattaca 301  Q
    |||||||||||||| |  ||||| ||||| |||||||| ||||||  | | |||||||||||||||| || ||| |||||||||| | ||| ||| ||||    
T  42685876 tcatgttaacttgtatcctaaaggcacatgttaaggaattcaaaaaaagctattttgcattgaaaaacataatattttaactttttagaagttgactaca 42685777  T
Q  302 cgatttttgatacatatatttctataat 329  Q
    ||| |||||||||| |||||||||||||    
T  42685776 cgacttttgatacacatatttctataat 42685749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 360
Target Start/End: Complemental strand, 6530476 - 6530315
Alignment:
Q  199 gggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgatt 298  Q
    |||||||||||||||||||  ||| ||||||| ||||| ||| ||||| || ||| ||||||||| |||| || |||  || |||||||| ||| ||| |    
T  6530476 gggtcatgttaacttgtgtcctaaggacacatgttaagcaacccaaaaagagcaactttgcattggaaaacataatatattgacttttaagaagttgaat 6530377  T
Q  299 acacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
     ||||| |||| || | ||||||||| |||| |||| ||||| ||||||||||||| |||||    
T  6530376 gcacgactttttatgcttatatttctttaataagttccttaacatgtgcccttgagggcaca 6530315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 360
Target Start/End: Complemental strand, 41602519 - 41602414
Alignment:
Q  255 tttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgag 354  Q
    ||||||||||||||||| | ||||||| |||||| ||  ||| |||||||||||| || | |||||||||||||||| || ||||| ||||||| |||||    
T  41602519 tttgcattgaaaaatataacaatttaaattttaagaatatgaatacacgattttttatgcgtatatttctataatgaattccttaacatgtgccgttgag 41602420  T
Q  355 agcaca 360  Q
    ||||||    
T  41602419 agcaca 41602414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 199 - 340
Target Start/End: Complemental strand, 15067742 - 15067601
Alignment:
Q  199 gggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgatt 298  Q
    ||||||||||||||||||   ||||| ||||| |||||||||  ||||| | ||| ||||||||| |||| || |||||||||||||| | ||  ||| |    
T  15067742 gggtcatgttaacttgtgccgtaaaggcacatgttaaggaacctaaaataagcaactttgcattggaaaacatcataatttaacttttgagaaattgact 15067643  T
Q  299 acacgatttttgatacatatatttctataatgagtttcttaa 340  Q
     ||||| ||||||||| | ||||||||||| ||||| |||||    
T  15067642 gcacgacttttgatacgtttatttctataacgagttccttaa 15067601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 201 - 340
Target Start/End: Original strand, 13933042 - 13933181
Alignment:
Q  201 gtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattac 300  Q
    ||||||||||||| |||  ||| ||||| | |||| |||||||||| ||  || |||||||||||||| || ||| ||||| ||||||| || ||| ||     
T  13933042 gtcatgttaacttatgtcctaatgacacgtgttaaagaactcaaaaagagtaactttgcattgaaaaacataatattttaatttttaaagagttgactat 13933141  T
Q  301 acgatttttgatacatatatttctataatgagtttcttaa 340  Q
    |||| |||| |||  |||||||||||||||||||| ||||    
T  13933142 acgaattttaatatgtatatttctataatgagtttgttaa 13933181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 255 - 354
Target Start/End: Original strand, 40505301 - 40505400
Alignment:
Q  255 tttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgag 354  Q
    |||||||| |||||||||||| |||||||||||| ||| ||| | ||||| |||||||| ||||||||  |||||||||| ||||| |||| || |||||    
T  40505301 tttgcattaaaaaatatgatattttaacttttaagaagttgaatgcacgacttttgatatatatattttcataatgagttccttaacatgtacctttgag 40505400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 354
Target Start/End: Complemental strand, 35865249 - 35865147
Alignment:
Q  252 aattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgccctt 351  Q
    |||||| ||||  ||||||| ||| |||||||||||||||| ||| ||| ||| ||||||||  |||||||||||||| |||| ||||| || |||||||    
T  35865249 aattttacattagaaaatataatattttaacttttaaaaagttgactacgcgacttttgatatgtatatttctataataagttccttaacatatgccctt 35865150  T
Q  352 gag 354  Q
    |||    
T  35865149 gag 35865147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 255 - 360
Target Start/End: Complemental strand, 31313421 - 31313316
Alignment:
Q  255 tttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgag 354  Q
    ||||||||| |||| || |||  | ||||||||||||| ||| | || || ||||||||| |||||||||||||||| || ||||| |||||||||||||    
T  31313421 tttgcattggaaaacataatatgtcaacttttaaaaagttgaatgcatgacttttgatacgtatatttctataatgacttccttaacatgtgcccttgag 31313322  T
Q  355 agcaca 360  Q
     |||||    
T  31313321 ggcaca 31313316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 354
Target Start/End: Original strand, 8769054 - 8769144
Alignment:
Q  265 aaaatatgataatttaac-ttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgag 354  Q
    ||||||||||| |||||| |||||| ||  ||| | ||| | |||| |||||||||||||||||||||||| ||||| |||||||||||||    
T  8769054 aaaatatgatattttaaccttttaagaatatgaatgcacaactttttatacatatatttctataatgagttccttaagatgtgcccttgag 8769144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 360
Target Start/End: Complemental strand, 21372557 - 21372452
Alignment:
Q  255 tttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgag 354  Q
    ||||||||| |||| || | | |||||||||||||||| ||| ||||||| |||| || | |||||||||||||| |||| ||||| || | ||||||||    
T  21372557 tttgcattggaaaacataacactttaacttttaaaaagttgaatacacgactttttatgcgtatatttctataataagttccttaacatattcccttgag 21372458  T
Q  355 agcaca 360  Q
     |||||    
T  21372457 ggcaca 21372452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 360
Target Start/End: Original strand, 5493362 - 5493438
Alignment:
Q  284 tttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
    ||||||||| ||| | ||||| ||||||| | | |||||||||||||| |||||||| ||||||||||||| |||||    
T  5493362 tttaaaaagttgaatgcacgacttttgatgcgtgtatttctataatgactttcttaacatgtgcccttgagggcaca 5493438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 346
Target Start/End: Complemental strand, 26014459 - 26014413
Alignment:
Q  300 cacgatttttgatacatatatttctataatgagtttcttaatatgtg 346  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||    
T  26014459 cacgacttttgatacatatattttaataatgagtttcttaatatgtg 26014413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 335
Target Start/End: Complemental strand, 7774722 - 7774630
Alignment:
Q  243 aaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagttt 335  Q
    |||||||  |||||| ||||| |||| || | | |||||  ||||| ||| ||| | ||||| ||||||||||||||||||||||||||||||    
T  7774722 aaaatgagtaattttacattggaaaacataacattttaatgtttaagaagttgaatgcacgacttttgatacatatatttctataatgagttt 7774630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 335
Target Start/End: Complemental strand, 7791369 - 7791277
Alignment:
Q  243 aaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagttt 335  Q
    |||||||  |||||| ||||| |||| || | | |||||  ||||| ||| ||| | ||||| ||||||||||||||||||||||||||||||    
T  7791369 aaaatgagtaattttacattggaaaacataacattttaatgtttaagaagttgaatgcacgacttttgatacatatatttctataatgagttt 7791277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 335
Target Start/End: Complemental strand, 7811953 - 7811861
Alignment:
Q  243 aaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagttt 335  Q
    |||||||  |||||| ||||| |||| || | | |||||  ||||| ||| ||| | ||||| ||||||||||||||||||||||||||||||    
T  7811953 aaaatgagtaattttacattggaaaacataacattttaatgtttaagaagttgaatgcacgacttttgatacatatatttctataatgagttt 7811861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 31592331 - 31592403
Alignment:
Q  199 gggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatat 271  Q
    |||| ||||||| |||| || ||| |||||||||||| ||| |||||| || ||| |||||||| ||||||||    
T  31592331 gggttatgttaatttgtattctaaggacacatattaaagaagtcaaaaagagcaactttgcattaaaaaatat 31592403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 3e-30; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 255 - 354
Target Start/End: Complemental strand, 28337318 - 28337219
Alignment:
Q  255 tttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgag 354  Q
    |||||||||||||||||  || |||||||||||| ||| ||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  28337318 tttgcattgaaaaatatagtattttaacttttaagaagttgattgcacgattttttatacatatatttctataatgagtttcttaacatgtgcccttgag 28337219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 199 - 354
Target Start/End: Original strand, 26080964 - 26081119
Alignment:
Q  199 gggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgatt 298  Q
    |||||||||||||| ||| | ||| | ||||| ||||||||| ||||| |||||||||||||||| |||| || ||| |||||||||||| ||| |||      
T  26080964 gggtcatgttaactcgtgctctaagggcacatgttaaggaacccaaaaagaacaattttgcattgtaaaacataatattttaacttttaagaagttgacg 26081063  T
Q  299 acacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgag 354  Q
     ||| |||||| |||  ||||||||||||||||||| ||||||||||||| |||||    
T  26081064 gcacaatttttaatatgtatatttctataatgagttccttaatatgtgccattgag 26081119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 199 - 354
Target Start/End: Original strand, 26104751 - 26104906
Alignment:
Q  199 gggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgatt 298  Q
    |||||||||||||| ||| | ||| | ||||| ||||||||| ||||| |||||||||||||||| |||| || ||| |||||||||||| ||| |||      
T  26104751 gggtcatgttaactcgtgctctaagggcacatgttaaggaacccaaaaagaacaattttgcattgtaaaacataatattttaacttttaagaagttgacg 26104850  T
Q  299 acacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgag 354  Q
     ||| |||||| |||  ||||||||||||||||||| ||||||||||||| |||||    
T  26104851 gcacaatttttaatatgtatatttctataatgagttccttaatatgtgccattgag 26104906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 226 - 351
Target Start/End: Complemental strand, 32546849 - 32546725
Alignment:
Q  226 cacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttcta 325  Q
    ||||||||||||||| |||||||| |||||| ||||| ||||||||||||||||||||||||| ||| ||||| | ||| ||||||| | ||||||||||    
T  32546849 cacatattaaggaacccaaaatgagcaattt-gcattaaaaaatatgataatttaacttttaagaagttgattgcccgacttttgatgcgtatatttcta 32546751  T
Q  326 taatgagtttcttaatatgtgccctt 351  Q
    ||| |||||| ||||  |||||||||    
T  32546750 taaggagttttttaacgtgtgccctt 32546725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 198 - 360
Target Start/End: Complemental strand, 32786961 - 32786799
Alignment:
Q  198 tgggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgat 297  Q
    ||||||||| |||||||||   ||| | ||||| ||||||||| | ||| || ||| |||| |||| |||| || ||| |||||||||||| ||| |||     
T  32786961 tgggtcatgctaacttgtgccctaagggcacatgttaaggaacccgaaaagagcaactttgtattggaaaacataatattttaacttttaagaagttgaa 32786862  T
Q  298 tacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
    | ||||| ||||||||| ||||||| ||||||||||| ||||| ||||||||||||| |||||    
T  32786861 tgcacgacttttgatacgtatatttatataatgagttccttaacatgtgcccttgagggcaca 32786799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 350
Target Start/End: Complemental strand, 2033775 - 2033629
Alignment:
Q  204 atgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacg 303  Q
    |||||||||| ||  || ||| ||||| ||||  |||||||||  || |||||||||||||||||||| | |  | ||||||||||||| ||| | |||     
T  2033775 atgttaacttatgcctttaaggcacatgttaaacaactcaaaaaaaataattttgcattgaaaaatataacatatcaacttttaaaaagttgaatgcaca 2033676  T
Q  304 atttttgatacatatatttctataatgagtttcttaatatgtgccct 350  Q
    |||||| ||| || |||||||||||| || ||||||| |||||||||    
T  2033675 attttttataaatgtatttctataataaggttcttaacatgtgccct 2033629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 345
Target Start/End: Complemental strand, 31399427 - 31399302
Alignment:
Q  218 tttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacata 317  Q
    ||||||| ||||| |||||||||  ||||  |||||||||  ||| |||||||||||| |||||||||||||||| | | || || | |||| |||  ||    
T  31399427 tttaaaggcacatgttaaggaaccaaaaa--aacaattttatattaaaaaatatgatagtttaacttttaaaaagttaaatatacaacttttaatatgta 31399330  T
Q  318 tatttctataatgagtttcttaatatgt 345  Q
    ||||| ||||||||||||||||| ||||    
T  31399329 tatttttataatgagtttcttaacatgt 31399302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 298 - 346
Target Start/End: Original strand, 7458001 - 7458049
Alignment:
Q  298 tacacgatttttgatacatatatttctataatgagtttcttaatatgtg 346  Q
    |||||||||||||||||||||||||||||||||| ||| |||| |||||    
T  7458001 tacacgatttttgatacatatatttctataatgaatttattaacatgtg 7458049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 340
Target Start/End: Original strand, 47990934 - 47991075
Alignment:
Q  199 gggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgatt 298  Q
    |||| ||||||||||||||  ||| |  | || |||||||||  |||||||  || ||||||||| |||| |||||||||||||||||||  || | | |    
T  47990934 gggtaatgttaacttgtgtcctaagggtatatgttaaggaacctaaaatgagtaactttgcattggaaaacatgataatttaacttttaaggagttcact 47991033  T
Q  299 acacgatttttgatacatatatttctataatgagtttcttaa 340  Q
     ||||  ||||||||| ||||| |||||||||| || |||||    
T  47991034 gcacggcttttgatacgtatatatctataatgaattccttaa 47991075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 353
Target Start/End: Original strand, 47390545 - 47390661
Alignment:
Q  237 gaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttc 336  Q
    ||||| |||||||||||||||| ||||||||| || ||| || |||||| || ||| ||| |  |||| |||| |||| |||||||  |||||||||||     
T  47390545 gaacttaaaatgaacaattttgtattgaaaaacataatatttgaactttcaagaagttgaatgtacgacttttaatacgtatatttaaataatgagtttt 47390644  T
Q  337 ttaatatgtgcccttga 353  Q
    |||| || || ||||||    
T  47390645 ttaacatatgtccttga 47390661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 340
Target Start/End: Complemental strand, 31054310 - 31054198
Alignment:
Q  232 ttaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgattttt----gatacatatatttctata 327  Q
    ||||||||| ||||| |||||| ||| ||||| | ||||| ||| |||||||||||| ||| ||| |  |||| ||||     |||||||||||||||||    
T  31054310 ttaaggaacacaaaaagaacaactttacattggagaatataatattttaacttttaagaagttgaatgtacgacttttaatacatacatatatttctata 31054211  T
Q  328 atgagtttcttaa 340  Q
    |||| ||||||||    
T  31054210 atgaatttcttaa 31054198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 202 - 360
Target Start/End: Original strand, 27918330 - 27918488
Alignment:
Q  202 tcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattaca 301  Q
    ||||| |||| ||||| |||| | ||||| ||||||||  ||||| || ||||||||||||||||||||| ||| |||||||||||| ||| | | | ||    
T  27918330 tcatgctaacgtgtgtcttaagggcacatgttaaggaatccaaaaagagcaattttgcattgaaaaatataatattttaacttttaagaagtttaatgca 27918429  T
Q  302 cgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
    ||| ||||||||||||||||||||||| ||||| ||||| ||||| ||||||| |||||    
T  27918430 cgacttttgatacatatatttctataacgagttccttaacatgtgtccttgagggcaca 27918488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 251 - 349
Target Start/End: Complemental strand, 38705863 - 38705765
Alignment:
Q  251 caattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgccc 349  Q
    ||||||||||||||||||||| ||| |||||||||| |||||  |||||||||||||||||| |||||||||||||||| |||| ||||||| ||||||    
T  38705863 caattttgcattgaaaaatataatattttaactttttaaaagtcgattacacgatttttgatgcatatatttctataataagttccttaatacgtgccc 38705765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 192 - 322
Target Start/End: Original strand, 29818440 - 29818570
Alignment:
Q  192 aattattgggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaa 291  Q
    |||||||||||| |||||| |||||||||||| ||| || ||||||||   |||||||| || ||||||||| |||| ||||||||||||||||||| ||    
T  29818440 aattattgggtcgtgttaagttgtgttttaaaaacatatgttaaggaatctaaaatgaataaatttgcattggaaaacatgataatttaacttttaagaa 29818539  T
Q  292 gctgattacacgatttttgatacatatattt 322  Q
    | |||||  |  |||||||||||||||||||    
T  29818540 gttgattggataatttttgatacatatattt 29818570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 200 - 353
Target Start/End: Complemental strand, 14139144 - 14138991
Alignment:
Q  200 ggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgatta 299  Q
    |||||||||||||||||| |||| | ||||| ||||||||| | |||  |  |||| || |||| ||||||| ||| |||||||||||| ||  ||| ||    
T  14139144 ggtcatgttaacttgtgtcttaagggcacatgttaaggaaccctaaaaaagtaattatgtattggaaaatataatattttaacttttaagaaattgacta 14139045  T
Q  300 cacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttga 353  Q
    ||||||||||||||| ||||||||||||| | |||  |||| ||||||||||||    
T  14139044 cacgatttttgatacgtatatttctataaagggttcattaacatgtgcccttga 14138991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 251 - 348
Target Start/End: Original strand, 54719665 - 54719762
Alignment:
Q  251 caattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgcc 348  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||| || |||| |||| |||  |||||||||||||| | || ||||| |||||||    
T  54719665 caattttgcattgaaaaatatgataatttaacttttaagaagttgactatacgacttttaataagtatatttctataataaattccttaacatgtgcc 54719762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 353
Target Start/End: Original strand, 42051169 - 42051257
Alignment:
Q  265 aaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttga 353  Q
    ||||||| ||| |||||||||||| ||| ||| | ||||| ||||||||||||||||| |||||||||||  |||||||||| ||||||    
T  42051169 aaaatataatattttaacttttaacaagttgaatgcacgacttttgatacatatatttttataatgagttcattaatatgtgtccttga 42051257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 360
Target Start/End: Complemental strand, 22019560 - 22019398
Alignment:
Q  198 tgggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgat 297  Q
    |||||||||||||||||||   ||| | ||||| ||||| ||| | ||| |  ||||||| ||||| ||||||||||| ||| | |||| | ||| |||     
T  22019560 tgggtcatgttaacttgtgccctaagggcacatgttaagaaacccgaaaagggcaattttacattggaaaatatgatagtttcattttttagaagttgaa 22019461  T
Q  298 tacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
    |  ||||||||| || |||||||||||||||||||||  |||| ||||| ||||||| |||||    
T  22019460 tgtacgatttttaatgcatatatttctataatgagttctttaacatgtgtccttgagggcaca 22019398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 354
Target Start/End: Complemental strand, 36989948 - 36989848
Alignment:
Q  255 tttgcattgaaaaatatgataattt-aacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttga 353  Q
    ||||||||| |||| || ||| ||| ||||||||| ||| ||| | ||||| |||| |||  ||||||| ||||||||||||||||||||||||||||||    
T  36989948 tttgcattggaaaacataatattttgaacttttaagaagttgaatgcacgacttttaatatgtatatttttataatgagtttcttaatatgtgcccttga 36989849  T
Q  354 g 354  Q
    |    
T  36989848 g 36989848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 313
Target Start/End: Complemental strand, 29508834 - 29508720
Alignment:
Q  199 gggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgatt 298  Q
    ||||| ||||||||||||   ||| | ||||| ||||||||| ||||| || ||||||||||||| |||| || ||| || ||||||||| ||| ||| |    
T  29508834 gggtcgtgttaacttgtgccctaagggcacatgttaaggaacccaaaaagagcaattttgcattggaaaacataatatttaaacttttaagaagttgaat 29508735  T
Q  299 acacgatttttgata 313  Q
    |||||| ||||||||    
T  29508734 acacgacttttgata 29508720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 36937484 - 36937553
Alignment:
Q  277 tttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtg 346  Q
    |||||||||||| ||| ||| | |||| ||||| ||||||||||||||||||||||||| |||| |||||    
T  36937484 tttaacttttaagaagttgaatgcacgtttttttatacatatatttctataatgagtttgttaacatgtg 36937553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 360
Target Start/End: Complemental strand, 1961702 - 1961619
Alignment:
Q  277 tttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
    |||||||||| | ||| ||| | ||||| ||||||||  |||||||||||||| ||||| |||| ||||||||||||| |||||    
T  1961702 tttaactttttagaagttgaatgcacgacttttgatatttatatttctataataagttttttaacatgtgcccttgagggcaca 1961619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 331
Target Start/End: Original strand, 9791245 - 9791371
Alignment:
Q  204 atgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacg 303  Q
    ||||||||||||| ||||||||||||| |||||||||  ||||  || || ||   |||| |||| || |||  ||||||||||||||| | | ||||||    
T  9791245 atgttaacttgtgatttaaagacacatgttaaggaacaaaaaaaaaaaaaattat-attggaaaacattatatcttaacttttaaaaagttcactacacg 9791343  T
Q  304 atttttgatacatatatttctataatga 331  Q
    |||| |||||  ||||||||||||||||    
T  9791344 atttctgatatgtatatttctataatga 9791371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 345
Target Start/End: Original strand, 40311677 - 40311815
Alignment:
Q  207 ttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatt 306  Q
    ||||||||| | |||||||||||| ||||| | | ||||| || | | |||| |||| |||| || ||| ||||| |||||| ||  ||| ||||||| |    
T  40311677 ttaacttgtatcttaaagacacatgttaagtatcccaaaaagagctactttgtattggaaaacataatattttaatttttaagaaattgactacacgact 40311776  T
Q  307 tttgatacatatatttctataatgagtttcttaatatgt 345  Q
    |||||||| ||||||  |||||||| |||||||| ||||    
T  40311777 tttgatacgtatattattataatgaatttcttaacatgt 40311815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 345
Target Start/End: Original strand, 40321753 - 40321891
Alignment:
Q  207 ttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatt 306  Q
    ||||||||| | |||||||||||| ||||| | | ||||| || | | |||| |||| |||| || ||| ||||| |||||| ||  ||| ||||||| |    
T  40321753 ttaacttgtatcttaaagacacatgttaagtatcccaaaaagagctactttgtattggaaaacataatattttaatttttaagaaattgactacacgact 40321852  T
Q  307 tttgatacatatatttctataatgagtttcttaatatgt 345  Q
    |||||||| ||||||  |||||||| |||||||| ||||    
T  40321853 tttgatacgtatattattataatgaatttcttaacatgt 40321891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 288
Target Start/End: Complemental strand, 3970395 - 3970331
Alignment:
Q  224 gacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaa 288  Q
    |||||||||| |||||   ||||||||||| |||| ||| |||||||||||||||||| ||||||    
T  3970395 gacacatattgaggaaactaaaatgaacaactttgtattaaaaaatatgataatttaatttttaa 3970331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 50297709 - 50297789
Alignment:
Q  280 aacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
    ||||||||| ||| ||| | ||||  ||||||||  | |||||||||||||||| |||||| ||||||||||||| |||||    
T  50297709 aacttttaagaagttgaatgcacgccttttgatatgtgtatttctataatgagtatcttaacatgtgcccttgagggcaca 50297789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 340
Target Start/End: Original strand, 41459977 - 41460019
Alignment:
Q  298 tacacgatttttgatacatatatttctataatgagtttcttaa 340  Q
    |||||||||||| |||| |||||||||||||| ||||||||||    
T  41459977 tacacgatttttaatacgtatatttctataataagtttcttaa 41460019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 30033475 - 30033544
Alignment:
Q  199 gggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaa 268  Q
    ||||||||||||||||||   ||||| || || ||||||||||||||| || ||| ||||||||| ||||    
T  30033475 gggtcatgttaacttgtgccctaaaggcatatgttaaggaactcaaaaagagcaactttgcattggaaaa 30033544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 275
Target Start/End: Original strand, 36937122 - 36937199
Alignment:
Q  198 tgggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgata 275  Q
    ||||||||||||| |||||   ||| ||||||| ||||||||||||||  || ||||||| ||||| |||| ||||||    
T  36937122 tgggtcatgttaatttgtgccctaatgacacatgttaaggaactcaaacagagcaattttacattggaaaacatgata 36937199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 226 - 360
Target Start/End: Original strand, 11017960 - 11018094
Alignment:
Q  226 cacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttcta 325  Q
    ||||| |||||||||  ||||||| ||| ||||||||| |||| ||||||||||||||||||| ||| ||| | ||||| |||| |||| ||||||||||    
T  11017960 cacatgttaaggaacctaaaatgagcaactttgcattggaaaacatgataatttaacttttaagaagttgactgcacgacttttaatacgtatatttcta 11018059  T
Q  326 taatgagtttcttaatatgtgcccttgagagcaca 360  Q
    |||| |||| ||||| |||||||||||||||||||    
T  11018060 taataagttccttaacatgtgcccttgagagcaca 11018094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 201 - 339
Target Start/End: Complemental strand, 4084866 - 4084728
Alignment:
Q  201 gtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattac 300  Q
    |||||||||||||||||| ||| | ||| | |||| |||| |||||| | ||| ||| |||||||||| ||||| ||||||||||||||||| ||| |||    
T  4084866 gtcatgttaacttgtgttctaagggcacgtgttaaagaacccaaaataagcaaatttacattgaaaaacatgattatttaacttttaaaaagttgactac 4084767  T
Q  301 acgatttttgatacatatatttctataatgagtttctta 339  Q
    |||| |||| |||| |||||||||||||| |||| ||||    
T  4084766 acgacttttaatacgtatatttctataataagttactta 4084728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 1035705 - 1035577
Alignment:
Q  232 ttaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatga 331  Q
    ||||| ||| ||||| |||||| ||||||| ||||||||| ||| |||||||||||| ||| ||| | || || ||||||||  ||||||||||||||||    
T  1035705 ttaagaaacccaaaaagaacaactttgcatcgaaaaatataatattttaacttttaataagttgaatgcaagacttttgatatgtatatttctataatga 1035606  T
Q  332 gtttcttaatatgtgcccttgagagcaca 360  Q
    ||| ||||| ||||||||||||| |||||    
T  1035605 gttccttaacatgtgcccttgagggcaca 1035577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 199 - 345
Target Start/End: Complemental strand, 16394995 - 16394849
Alignment:
Q  199 gggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgatt 298  Q
    |||||||| |||||| |||  ||| | ||||  ||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||| |||  || |    
T  16394995 gggtcatgctaacttatgtcataagggcacaagttaaggaacccaaaatgaacaactttgcattgaaaaacatgataatttaacttttaagaagtagact 16394896  T
Q  299 acacgatttttgatacatatatttctataatgagtttcttaatatgt 345  Q
       ||| |||| |||| ||||||| ||||||||||| ||||| ||||    
T  16394895 gttcgacttttaatacgtatatttttataatgagttccttaacatgt 16394849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 354
Target Start/End: Complemental strand, 31262729 - 31262573
Alignment:
Q  199 gggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgatt 298  Q
    |||||||| ||| ||||| |||||  |||||| ||||  |||  ||||  ||||||||||||||| |||| || |||  | ||||||||| ||| ||| |    
T  31262729 gggtcatgctaatttgtgctttaacaacacatgttaaacaacctaaaaaaaacaattttgcattggaaaacataatatgtcaacttttaagaagttgaat 31262630  T
Q  299 acacgatttttgatacat-atatttctataatgagtttcttaatatgtgcccttgag 354  Q
     ||| ||||||||||  | ||||||||||||||||||||||||||| ||||||||||    
T  31262629 gcacaatttttgatatgttatatttctataatgagtttcttaatatatgcccttgag 31262573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 277 - 360
Target Start/End: Complemental strand, 25366827 - 25366744
Alignment:
Q  277 tttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
    |||||||||||||||| | ||||||||| |||||||||  ||| ||||||| |||||| ||||| ||||| |||||||||||||    
T  25366827 tttaacttttaaaaagtttattacacgacttttgatacggataattctatattgagttccttaacatgtgtccttgagagcaca 25366744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 201 - 360
Target Start/End: Original strand, 28490492 - 28490650
Alignment:
Q  201 gtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattac 300  Q
    ||||||||||||| ||  |||| |||| || ||||||||||||||| || ||| | || ||| ||||| || ||| |||||||||| | ||| ||||| |    
T  28490492 gtcatgttaacttatgccttaaggacatatgttaaggaactcaaaaagagcaactatgtattaaaaaacataatattttaactttttagaagttgattgc 28490591  T
Q  301 acgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
    |||| ||||||||  |||||||||||||||| || ||||| ||||| | || ||||||||    
T  28490592 acga-ttttgatatgtatatttctataatgaattccttaacatgtgtcattaagagcaca 28490650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 360
Target Start/End: Original strand, 41884609 - 41884771
Alignment:
Q  198 tgggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgat 297  Q
    ||||| |||||||||||||  |||||| ||||| |||||||||  || |  ||||| ||||||||| ||||||  ||| |||||||||||| |||   |     
T  41884609 tgggtaatgttaacttgtgccttaaaggcacatgttaaggaacctaacaaaaacaactttgcattggaaaataaaatattttaacttttaagaagtcaaa 41884708  T
Q  298 tacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
    | || || ||||||||  ||| ||||||||||||||| ||||| ||||||| ||||| |||||    
T  41884709 tgcatgacttttgatatgtatgtttctataatgagttacttaacatgtgccattgagggcaca 41884771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 353
Target Start/End: Original strand, 37316642 - 37316719
Alignment:
Q  276 atttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttga 353  Q
    ||||||||||||| ||| | | ||||||||||||||||||||||||| ||||||||||| ||||| || || ||||||    
T  37316642 atttaacttttaagaagttaaatacacgatttttgatacatatatttttataatgagttccttaacatttgtccttga 37316719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 360
Target Start/End: Complemental strand, 16583317 - 16583164
Alignment:
Q  207 ttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatt 306  Q
    |||||||||||  ||| | ||||| ||||||||  |||| ||| ||| |||  |||  |||| |||||||||||||| |||| ||| ||| ||||||| |    
T  16583317 ttaacttgtgtcataagggcacatgttaaggaatccaaattgagcaactttaaattagaaaacatgataatttaactattaagaagttgactacacgact 16583218  T
Q  307 tttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
    |||||||| ||| ||| |||||| |||| ||||| ||||||  |||||| ||||    
T  16583217 tttgatacgtatgtttttataataagttccttaacatgtgcttttgagaacaca 16583164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 327
Target Start/End: Original strand, 26176325 - 26176428
Alignment:
Q  224 gacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttc 323  Q
    ||||||| |||||||||  ||||  |||||||||||||||||||| || ||| ||| |||||||||||| ||| | ||||  | || | |||||||||||    
T  26176325 gacacatgttaaggaaccaaaaagtaacaattttgcattgaaaaacataatattttgacttttaaaaagatgaatgcacggctattaagacatatatttc 26176424  T
Q  324 tata 327  Q
    ||||    
T  26176425 tata 26176428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 349
Target Start/End: Original strand, 36012451 - 36012557
Alignment:
Q  243 aaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaata 342  Q
    ||||||||||| | ||||||| |||| | |||||||||| |||||| ||| |||||  |||| |||  |||| |||||||||||||| ||||  |||| |    
T  36012451 aaaatgaacaactatgcattggaaaacacgataatttaatttttaagaagttgattgtacgactttcaatacttatatttctataataagttctttaaca 36012550  T
Q  343 tgtgccc 349  Q
    |||||||    
T  36012551 tgtgccc 36012557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 8644801 - 8644845
Alignment:
Q  316 tatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
    |||||||||||||||||||| |||| ||||||||||||| |||||    
T  8644801 tatatttctataatgagtttattaacatgtgcccttgagggcaca 8644845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 348
Target Start/End: Complemental strand, 3896022 - 3895928
Alignment:
Q  254 ttttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtgcc 348  Q
    |||| ||||||||||||| ||| ||||| |||| | ||| ||||||||  | ||||||||| ||||||| |||||||| |  ||||| |||||||    
T  3896022 ttttacattgaaaaatataatattttaagtttttagaagttgattacataacttttgatacgtatatttttataatgaataccttaacatgtgcc 3895928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 360
Target Start/End: Complemental strand, 31635584 - 31635450
Alignment:
Q  226 cacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttcta 325  Q
    ||||| |||||||||  |||| ||||||||| ||| |  |||| || ||| |||||||||||| ||| ||| | ||||| |||| |||  |||||||| |    
T  31635584 cacatgttaaggaacctaaaaagaacaatttagcactagaaaacataatattttaacttttaagaagttgaatgcacgacttttaatatgtatatttcca 31635485  T
Q  326 taatgagtttcttaatatgtgcccttgagagcaca 360  Q
    |||||| || ||||| ||||  | |||||||||||    
T  31635484 taatgaattccttaacatgtatctttgagagcaca 31635450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 346
Target Start/End: Complemental strand, 950127 - 950079
Alignment:
Q  298 tacacgatttttgatacatatatttctataatgagtttcttaatatgtg 346  Q
    ||||||| ||||||||| |||| |||||||||||||| ||||| |||||    
T  950127 tacacgacttttgatacgtatacttctataatgagttgcttaacatgtg 950079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 15281371 - 15281435
Alignment:
Q  265 aaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataat 329  Q
    ||||||| ||| ||||| |||||||||| | | | |||||||||| || ||||||||||||||||    
T  15281371 aaaatataatattttaatttttaaaaagttaaatgcacgatttttaatgcatatatttctataat 15281435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 340
Target Start/End: Original strand, 10745 - 10877
Alignment:
Q  208 taacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgattt 307  Q
    |||||||||  |||| ||| ||| ||||| ||||||| | ||||||||||  ||| ||||||||||||  |||| |||||||||| | | ||||||| ||    
T  10745 taacttgtgccttaaggacgcatgttaagcaactcaagaagaacaattttatattaaaaaatatgatatgttaatttttaaaaagttaaatacacgactt 10844  T
Q  308 ttgatacatatatttctataatgagtttcttaa 340  Q
    |||||||||||||||||||||| | ||||||||    
T  10845 ttgatacatatatttctataataaatttcttaa 10877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 354
Target Start/End: Original strand, 6469543 - 6469696
Alignment:
Q  201 gtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattac 300  Q
    ||||||||||||| ||  |||| | || || |||| ||||  ||||||| ||| |||||||||||||| |||||||||||| |||||| ||| ||| | |    
T  6469543 gtcatgttaacttatgccttaagggcatatgttaaagaaccgaaaatgagcaactttgcattgaaaaacatgataatttaatttttaagaagttgactgc 6469642  T
Q  301 acgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgag 354  Q
    |||| |||| ||| ||||||||||||||||| || ||||| || |||| |||||    
T  6469643 acgacttttaataaatatatttctataatgaattccttaacatatgccattgag 6469696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 30249275 - 30249167
Alignment:
Q  238 aactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttct 337  Q
    ||||||||| ||  || |||||||||||||| || ||| |||||||||||| ||| ||| | ||||| ||||||||| ||||||||||||||||||| ||    
T  30249275 aactcaaaacgagtaactttgcattgaaaaacataatattttaacttttaagaagttgactgcacgaattttgatacctatatttctataatgagttcct 30249176  T
Q  338 taatatgtg 346  Q
    ||| |||||    
T  30249175 taacatgtg 30249167  T

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Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 334
Target Start/End: Complemental strand, 1065731 - 1065623
Alignment:
Q  226 cacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttcta 325  Q
    ||||| ||||||||||||||| ||| ||||||  |||| ||||||| ||| |||||||||||| ||| ||| |  |||| ||||||||||||||||| ||    
T  1065731 cacatgttaaggaactcaaaaagaataattttatattggaaaatataatagtttaacttttaataagttgaatgtacgacttttgatacatatattttta 1065632  T
Q  326 taatgagtt 334  Q
    | |||||||    
T  1065631 ttatgagtt 1065623  T

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Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 29286074 - 29286004
Alignment:
Q  264 aaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtt 334  Q
    |||||||| ||| ||||| |||||| ||| ||| | |||||||||| |||| |||||||||||||||||||    
T  29286074 aaaaatataatattttaaattttaagaagttgaatgcacgattttttatacgtatatttctataatgagtt 29286004  T

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Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 360
Target Start/End: Complemental strand, 3787601 - 3787437
Alignment:
Q  196 attgggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctg 295  Q
    |||| ||||||||||||| |||  ||| | ||||| |||| ||| |||||| || ||||||| ||||  |||| |||||| |||||||||||| ||  ||    
T  3787601 attgagtcatgttaacttatgtcctaagggcacatgttaatgaattcaaaaagagcaattttacattagaaaacatgatagtttaacttttaagaaattg 3787502  T
Q  296 attacacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
    | |  | || |||| |||| ||||||| |||||| ||||  |||| ||||| ||||||| |||||    
T  3787501 aatgtatgacttttaatacgtatatttttataataagttctttaacatgtgtccttgagggcaca 3787437  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 351
Target Start/End: Original strand, 14215157 - 14215210
Alignment:
Q  298 tacacgatttttgatacatatatttctataatgagtttcttaatatgtgccctt 351  Q
    ||||||||||||||||||||||||  |||||| ||||  |||| ||||||||||    
T  14215157 tacacgatttttgatacatatattcttataataagttcattaagatgtgccctt 14215210  T

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Target: scaffold0542 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 199 - 360
Target Start/End: Complemental strand, 4684 - 4524
Alignment:
Q  199 gggtcatgttaacttgtgttttaaagacacatattaaggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgatt 298  Q
    |||||||||||||||||||  ||||| ||||||||||| |||  |||| || ||||||  |||||||||| || |||    || |||||| ||| ||| |    
T  4684 gggtcatgttaacttgtgtcataaaggcacatattaagcaacctaaaaagagcaatttcacattgaaaaa-ataatatgacaatttttaagaagttgaat 4586  T
Q  299 acacgatttttgatacatatatttctataatgagtttcttaatatgtgcccttgagagcaca 360  Q
     ||||  ||||||||  |||||||||||||||||| |||||| ||||| ||||||| |||||    
T  4585 gcacgcattttgatatgtatatttctataatgagtatcttaacatgtgtccttgagggcaca 4524  T

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Target: scaffold0116 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 346
Target Start/End: Original strand, 3006 - 3100
Alignment:
Q  252 aattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagtttcttaatatgtg 346  Q
    |||||||||||  |||| || | | |||||||||||| ||| ||| | || || ||||||||||||||| ||||||||||||| ||||| |||||    
T  3006 aattttgcatttgaaaacataacattttaacttttaagaagttgaatgcatgacttttgatacatatatatctataatgagttccttaacatgtg 3100  T

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Target: scaffold0116; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 346
Target Start/End: Original strand, 5991 - 6141
Alignment:
Q  199 gggtcatgttaacttgtgttttaaagacacatattaa---ggaactcaaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctg 295  Q
    ||||||||||||||| |||| | | ||||||| ||||   |||||| | || ||  |||||||||||  |||| || | | ||||| |||||| ||| ||    
T  5991 gggtcatgttaacttatgttcttaggacacatgttaataaggaacttacaaagagtaattttgcatttgaaaacataacattttaatttttaagaagttg 6090  T
Q  296 attacacgatttttgatacatatatttctataatgagtttcttaatatgtg 346  Q
    | | || || ||||||||||||||| ||||||||||||| ||||| |||||    
T  6091 aatccatgacttttgatacatatatatctataatgagttccttaacatgtg 6141  T

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Target: scaffold0482 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 335
Target Start/End: Original strand, 544 - 636
Alignment:
Q  243 aaaatgaacaattttgcattgaaaaatatgataatttaacttttaaaaagctgattacacgatttttgatacatatatttctataatgagttt 335  Q
    |||||||  |||||| ||||| |||| || | | |||||  ||||| ||| ||| | ||||| ||||||||||||||||||||||||||||||    
T  544 aaaatgagtaattttacattggaaaacataacattttaatgtttaagaagttgaatgcacgacttttgatacatatatttctataatgagttt 636  T

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