View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21042_high_32 (Length: 295)

Name: NF21042_high_32
Description: NF21042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21042_high_32
NF21042_high_32
[»] chr8 (34 HSPs)
chr8 (101-233)||(4676000-4676131)
chr8 (21-99)||(29708744-29708822)
chr8 (21-110)||(21132717-21132806)
chr8 (21-99)||(761733-761811)
chr8 (21-99)||(14378487-14378565)
chr8 (21-99)||(38842346-38842424)
chr8 (21-92)||(42149957-42150028)
chr8 (21-99)||(25691397-25691475)
chr8 (21-102)||(28583099-28583180)
chr8 (21-99)||(15870358-15870436)
chr8 (21-99)||(23437613-23437691)
chr8 (21-99)||(30464615-30464693)
chr8 (21-94)||(23547251-23547324)
chr8 (228-288)||(4678245-4678305)
chr8 (24-99)||(4326919-4326994)
chr8 (21-108)||(14583712-14583799)
chr8 (21-95)||(44040008-44040082)
chr8 (21-103)||(11538872-11538954)
chr8 (21-99)||(44887515-44887593)
chr8 (21-99)||(44362104-44362182)
chr8 (18-99)||(44947185-44947266)
chr8 (149-188)||(14935573-14935612)
chr8 (21-84)||(43184593-43184656)
chr8 (21-99)||(8496686-8496764)
chr8 (21-99)||(11756961-11757039)
chr8 (21-99)||(29616126-29616204)
chr8 (21-99)||(43049069-43049147)
chr8 (21-94)||(37094315-37094388)
chr8 (152-188)||(3379310-3379346)
chr8 (152-188)||(5567425-5567461)
chr8 (21-68)||(27302045-27302092)
chr8 (21-99)||(38036658-38036736)
chr8 (64-108)||(2805466-2805511)
chr8 (152-188)||(30224229-30224265)
[»] chr5 (32 HSPs)
chr5 (21-105)||(1098358-1098442)
chr5 (21-101)||(30351872-30351952)
chr5 (21-104)||(1831533-1831616)
chr5 (21-108)||(31190971-31191058)
chr5 (21-104)||(40317000-40317083)
chr5 (21-99)||(1780948-1781026)
chr5 (21-99)||(9936691-9936769)
chr5 (21-99)||(14607361-14607439)
chr5 (21-99)||(20023043-20023121)
chr5 (21-99)||(20040218-20040296)
chr5 (21-99)||(30721488-30721566)
chr5 (21-104)||(41410458-41410541)
chr5 (21-99)||(14057891-14057969)
chr5 (21-93)||(14633190-14633262)
chr5 (24-99)||(19344502-19344577)
chr5 (21-99)||(41262932-41263010)
chr5 (21-89)||(13548396-13548464)
chr5 (18-99)||(27675720-27675801)
chr5 (21-79)||(30211564-30211622)
chr5 (21-66)||(33402427-33402472)
chr5 (149-188)||(39787255-39787294)
chr5 (21-102)||(1831247-1831328)
chr5 (21-102)||(40316714-40316795)
chr5 (21-102)||(41410746-41410827)
chr5 (21-93)||(40080164-40080236)
chr5 (21-60)||(14140101-14140140)
chr5 (64-103)||(37304371-37304410)
chr5 (24-94)||(34170015-34170085)
chr5 (149-185)||(25076315-25076351)
chr5 (149-185)||(25134284-25134320)
chr5 (79-107)||(28319856-28319884)
chr5 (64-108)||(40512906-40512950)
[»] chr6 (26 HSPs)
chr6 (21-99)||(2913080-2913158)
chr6 (21-99)||(6142314-6142392)
chr6 (21-99)||(16969562-16969640)
chr6 (18-94)||(6188468-6188544)
chr6 (21-100)||(2667131-2667210)
chr6 (21-108)||(17496126-17496213)
chr6 (21-99)||(995746-995824)
chr6 (21-99)||(2397953-2398031)
chr6 (21-109)||(29514825-29514912)
chr6 (21-102)||(24825348-24825429)
chr6 (21-94)||(32541289-32541362)
chr6 (21-101)||(24798351-24798431)
chr6 (21-99)||(2141751-2141829)
chr6 (21-99)||(9023023-9023101)
chr6 (21-84)||(2656492-2656555)
chr6 (21-99)||(33347944-33348022)
chr6 (22-94)||(30699445-30699518)
chr6 (21-99)||(35117459-35117537)
chr6 (149-188)||(15866576-15866615)
chr6 (149-188)||(15868388-15868427)
chr6 (149-188)||(32079906-32079945)
chr6 (149-188)||(33869242-33869281)
chr6 (150-188)||(33866096-33866134)
chr6 (78-107)||(2310479-2310508)
chr6 (152-188)||(5376876-5376912)
chr6 (152-188)||(5378731-5378767)
[»] chr4 (47 HSPs)
chr4 (21-99)||(10385031-10385109)
chr4 (21-99)||(46608397-46608475)
chr4 (21-99)||(48380939-48381017)
chr4 (21-92)||(28914551-28914622)
chr4 (21-99)||(3708436-3708514)
chr4 (21-91)||(39332640-39332710)
chr4 (21-99)||(43447348-43447426)
chr4 (24-99)||(31152847-31152922)
chr4 (21-99)||(8525218-8525296)
chr4 (21-99)||(40411410-40411488)
chr4 (21-99)||(43047570-43047648)
chr4 (21-99)||(48652655-48652733)
chr4 (21-99)||(55631677-55631755)
chr4 (21-99)||(39171141-39171219)
chr4 (21-99)||(37164200-37164278)
chr4 (21-99)||(37667576-37667654)
chr4 (21-99)||(6520618-6520696)
chr4 (21-93)||(29821233-29821305)
chr4 (21-99)||(28988196-28988274)
chr4 (21-99)||(51306036-51306114)
chr4 (149-188)||(23985770-23985809)
chr4 (149-188)||(52545297-52545336)
chr4 (21-99)||(1377991-1378069)
chr4 (21-110)||(24505694-24505783)
chr4 (152-188)||(18656107-18656143)
chr4 (64-108)||(49768671-49768715)
chr4 (149-188)||(18320074-18320113)
chr4 (149-188)||(18395830-18395869)
chr4 (149-188)||(18398570-18398609)
chr4 (64-99)||(20678588-20678623)
chr4 (149-188)||(24807420-24807459)
chr4 (21-99)||(4271816-4271894)
chr4 (21-99)||(23605704-23605782)
chr4 (21-99)||(28898873-28898951)
chr4 (21-70)||(1981212-1981261)
chr4 (64-101)||(7738817-7738854)
chr4 (21-90)||(31657168-31657237)
chr4 (21-69)||(1613050-1613098)
chr4 (64-108)||(3442335-3442379)
chr4 (152-188)||(7040360-7040396)
chr4 (63-99)||(17494017-17494053)
chr4 (152-188)||(23564871-23564907)
chr4 (63-99)||(40071449-40071485)
chr4 (24-92)||(50685106-50685174)
chr4 (70-106)||(51744755-51744791)
chr4 (152-188)||(52518758-52518794)
chr4 (152-188)||(52520600-52520636)
[»] chr3 (42 HSPs)
chr3 (21-99)||(9484779-9484857)
chr3 (21-106)||(29720578-29720663)
chr3 (21-102)||(42098422-42098503)
chr3 (21-94)||(53274798-53274871)
chr3 (21-101)||(900884-900964)
chr3 (21-99)||(38878276-38878354)
chr3 (21-99)||(48927600-48927678)
chr3 (21-99)||(49076224-49076302)
chr3 (21-94)||(20144725-20144798)
chr3 (21-91)||(12250486-12250556)
chr3 (21-99)||(29455506-29455584)
chr3 (21-99)||(16434655-16434733)
chr3 (21-99)||(34263502-34263580)
chr3 (21-99)||(34555334-34555412)
chr3 (21-107)||(50673860-50673946)
chr3 (18-99)||(29793176-29793257)
chr3 (24-99)||(46866529-46866604)
chr3 (21-99)||(12948223-12948301)
chr3 (21-93)||(38833517-38833589)
chr3 (21-99)||(14750858-14750936)
chr3 (21-99)||(29444851-29444929)
chr3 (21-99)||(34669791-34669869)
chr3 (21-100)||(2643067-2643146)
chr3 (21-99)||(4228986-4229064)
chr3 (21-99)||(33462888-33462966)
chr3 (21-70)||(36178963-36179012)
chr3 (64-104)||(7460046-7460086)
chr3 (21-93)||(29809527-29809599)
chr3 (64-108)||(38492043-38492087)
chr3 (18-70)||(43399006-43399058)
chr3 (21-100)||(28958796-28958875)
chr3 (21-112)||(49818940-49819030)
chr3 (21-99)||(4945649-4945727)
chr3 (24-70)||(32961432-32961478)
chr3 (21-99)||(34680365-34680443)
chr3 (18-99)||(1778541-1778621)
chr3 (21-70)||(18013297-18013346)
chr3 (152-188)||(17402979-17403015)
chr3 (63-99)||(40497037-40497073)
chr3 (63-99)||(48169988-48170024)
chr3 (64-100)||(49057855-49057891)
chr3 (63-99)||(50676737-50676773)
[»] chr1 (41 HSPs)
chr1 (21-99)||(36035869-36035947)
chr1 (21-99)||(45299502-45299580)
chr1 (21-93)||(52749464-52749536)
chr1 (21-99)||(5606198-5606276)
chr1 (21-99)||(5945948-5946026)
chr1 (21-95)||(7075141-7075215)
chr1 (21-108)||(44741526-44741613)
chr1 (24-99)||(10100320-10100395)
chr1 (24-99)||(10124295-10124370)
chr1 (21-99)||(2138836-2138914)
chr1 (21-99)||(8250650-8250728)
chr1 (21-99)||(26544051-26544129)
chr1 (21-101)||(31651706-31651786)
chr1 (21-99)||(6017256-6017334)
chr1 (21-99)||(23393415-23393493)
chr1 (21-99)||(1821436-1821514)
chr1 (149-188)||(3282797-3282836)
chr1 (149-188)||(3284498-3284537)
chr1 (149-188)||(9312025-9312064)
chr1 (149-188)||(37664751-37664790)
chr1 (149-188)||(37674473-37674512)
chr1 (149-188)||(37702182-37702221)
chr1 (21-100)||(38786752-38786831)
chr1 (21-88)||(43452983-43453050)
chr1 (24-99)||(44240705-44240780)
chr1 (21-99)||(8048555-8048633)
chr1 (64-108)||(39354255-39354299)
chr1 (149-188)||(902073-902112)
chr1 (149-188)||(5924970-5925009)
chr1 (149-188)||(9310408-9310447)
chr1 (21-99)||(26476816-26476894)
chr1 (21-99)||(28490343-28490421)
chr1 (21-99)||(41855529-41855606)
chr1 (21-99)||(44963479-44963557)
chr1 (63-101)||(50777261-50777299)
chr1 (21-70)||(4489244-4489293)
chr1 (21-70)||(23337989-23338038)
chr1 (21-106)||(48389250-48389335)
chr1 (152-188)||(16808775-16808811)
chr1 (63-99)||(46862820-46862856)
chr1 (152-188)||(48940675-48940711)
[»] scaffold0221 (1 HSPs)
scaffold0221 (21-105)||(5559-5643)
[»] chr2 (31 HSPs)
chr2 (21-99)||(1748974-1749052)
chr2 (21-99)||(41319726-41319804)
chr2 (21-106)||(4137592-4137677)
chr2 (21-99)||(10333380-10333458)
chr2 (21-99)||(20917729-20917807)
chr2 (21-99)||(31603219-31603297)
chr2 (21-99)||(40471919-40471997)
chr2 (21-99)||(41437015-41437093)
chr2 (21-99)||(42754157-42754235)
chr2 (21-106)||(7724405-7724490)
chr2 (21-99)||(5096431-5096509)
chr2 (21-86)||(38963978-38964043)
chr2 (21-92)||(8373617-8373688)
chr2 (24-99)||(11277720-11277795)
chr2 (21-99)||(20682825-20682903)
chr2 (21-99)||(37317059-37317137)
chr2 (21-89)||(37987748-37987816)
chr2 (18-70)||(45036543-45036595)
chr2 (21-99)||(6729905-6729983)
chr2 (21-63)||(12209172-12209214)
chr2 (21-70)||(16333662-16333711)
chr2 (24-105)||(25627209-25627290)
chr2 (18-100)||(16127582-16127664)
chr2 (63-105)||(29194252-29194294)
chr2 (21-70)||(16125914-16125963)
chr2 (63-108)||(45080411-45080456)
chr2 (64-100)||(14707534-14707570)
chr2 (21-109)||(22718335-22718423)
chr2 (152-188)||(29758119-29758155)
chr2 (64-104)||(42038518-42038558)
chr2 (63-99)||(43370938-43370974)
[»] chr7 (22 HSPs)
chr7 (23-99)||(36820061-36820137)
chr7 (18-102)||(38069231-38069315)
chr7 (21-92)||(32345593-32345664)
chr7 (21-99)||(16806949-16807027)
chr7 (21-103)||(27621094-27621176)
chr7 (21-99)||(35693633-35693711)
chr7 (25-99)||(40232414-40232488)
chr7 (21-92)||(35265643-35265714)
chr7 (21-93)||(25273826-25273898)
chr7 (21-108)||(48448701-48448788)
chr7 (21-88)||(30462035-30462102)
chr7 (149-188)||(37405646-37405685)
chr7 (21-99)||(26651051-26651129)
chr7 (21-99)||(32972138-32972216)
chr7 (64-99)||(44479946-44479981)
chr7 (64-107)||(47081206-47081249)
chr7 (64-102)||(31466584-31466622)
chr7 (24-105)||(37099673-37099754)
chr7 (152-188)||(4895583-4895619)
chr7 (152-188)||(20046693-20046729)
chr7 (152-188)||(28124784-28124820)
chr7 (152-188)||(28126611-28126647)
[»] scaffold0001 (1 HSPs)
scaffold0001 (21-99)||(184149-184227)
[»] scaffold0283 (1 HSPs)
scaffold0283 (18-99)||(3163-3244)
[»] scaffold0251 (1 HSPs)
scaffold0251 (149-188)||(6222-6261)
[»] scaffold0006 (1 HSPs)
scaffold0006 (149-188)||(39141-39180)
[»] scaffold0195 (1 HSPs)
scaffold0195 (21-99)||(48-126)
[»] scaffold0061 (1 HSPs)
scaffold0061 (63-108)||(10008-10053)


Alignment Details
Target: chr8 (Bit Score: 117; Significance: 1e-59; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 4676000 - 4676131
Alignment:
Q  101 tattttttatatgtcaacaattggggattttgtctttagaattgttaggaataatcaactatagttagttgatagataaactagagtttaataagaattg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  4676000 tattttttatatgtcaacaattggggattttgtctttagaattgttaggaataatcaactatagttagttgat-ggtaaactagagtttaataagaattg 4676098  T
Q  201 aagacttttgatatgtaagtgaagatgtaatta 233  Q
    |||||||||||||||||||||||||| ||||||    
T  4676099 aagacttttgatatgtaagtgaagatctaatta 4676131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 29708744 - 29708822
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  29708744 aagatatttaaactcaaaattacgcattggtatgcgtaattgagtcaactaggtcacttattaagggacggagggagta 29708822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 21132806 - 21132717
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtattttttat 110  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||| |||| ||||||||||    
T  21132806 aagatatttaaactcaaaattatgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagtactattttttat 21132717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 761733 - 761811
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  761733 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 761811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 14378565 - 14378487
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  14378565 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 14378487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 38842346 - 38842424
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| ||||    
T  38842346 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtatcacttattaagggacggagggagta 38842424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 42150028 - 42149957
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacgga 92  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||    
T  42150028 aagatatttaaactcaaaattacgcatttgtatgcgaaattgggtcaactaggtcacttattaaaggacgga 42149957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 25691475 - 25691397
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||| || ||||||||||||||| ||||||||    
T  25691475 aagatatttaaactcaaaattacacattggtatgcataattgggtcaactatgttacttattaagggacgtaggaagta 25691397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 28583180 - 28583099
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagta 102  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||  |||||||||||||||| |||||||    
T  28583180 aagatatttaaactcaaaattacgcattggtatgcgtaactgggtcaactgtgtcatgtattaagggacggagggagtagta 28583099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 15870358 - 15870436
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||| ||||| ||| ||||    
T  15870358 aagatatttaaactcaaaattacgcattggtatgcataattgggtcaactagatcaattattaaaggacgaagggagta 15870436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 23437691 - 23437613
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||| ||||  ||||||  |||||||||||||||||||||| ||||    
T  23437691 aagatatttaaactcaaaattacgcattggtatgcgtcattgaatcaactgtgtcacttattaagggacggagggagta 23437613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 30464615 - 30464693
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||| ||||| ||||||||||| ||||||||  |||||||||||||||||||||| ||||    
T  30464615 aagatatttaaactcaaaattacacattgatatgcgtaatttggtcaactgtgtcacttattaagggacggagggagta 30464693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 23547251 - 23547324
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggagg 94  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||  |||||||||||||| |||||||    
T  23547251 aagatatttaaactcaaaattacgcattggtatgcgtaattaagtcaactgtgtcacttattaaggaacggagg 23547324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 4678245 - 4678305
Alignment:
Q  228 taattactcgaaatcatttatacgtctacaaacaaagatttttgtttttgtgtgatgatgt 288  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  4678245 taattactcgaaaccatttatacgtctacaaacaaagatttttgttttcgtgtgatgatgt 4678305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 4326994 - 4326919
Alignment:
Q  24 atatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||  ||||||||||||| |||||| ||||||    
T  4326994 atatttaaactcaaaattacacattgatatgcgtaattgggtcaactgtgtcacttattaagagacggatgaagta 4326919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 21 - 108
Target Start/End: Complemental strand, 14583799 - 14583712
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtatttttt 108  Q
    ||||||||||| |||||||||| ||||||| ||||||||| | |||||||| ||||  |||||||||||||||| |||||||||||||    
T  14583799 aagatatttaagctcaaaattatgcattggaatgcgtaatagagtcaactatgtcatgtattaagggacggagggagtagtatttttt 14583712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 44040008 - 44040082
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggagga 95  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||  |||| |||||| |||| ||||||    
T  44040008 aagatatttaaactcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatttattatgggatggagga 44040082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 11538872 - 11538954
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtat 103  Q
    ||||||||||| |||||||||| ||||||| ||| ||||| | |||||||| ||||  |||||||||||||||| ||||||||    
T  11538872 aagatatttaagctcaaaattatgcattggaatgtgtaatggagtcaactatgtcatgtattaagggacggagggagtagtat 11538954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 44887593 - 44887515
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||  |||||||||| ||||||||||||||||| |||||||||  |||| |||||| |||||||||| ||||    
T  44887593 aagatatttatgctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatttattatgggacggagggagta 44887515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 44362104 - 44362182
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||||||| ||||||| ||||||||| | |||||||  ||||  |||||||||||||||| ||||    
T  44362104 aagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactttgtcatgtattaagggacggagggagta 44362182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 44947185 - 44947266
Alignment:
Q  18 tttaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||| |||||||| |||||||||| |||||||||||||||||  ||||||||  ||||  ||||| |||||||||| ||||    
T  44947185 tttaatatatttaagctcaaaattatgcattggtatgcgtaatatggtcaactgtgtcatgtattatgggacggagggagta 44947266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 14935573 - 14935612
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  14935573 gaataatcaactatagttagttgataggtaaactagagtt 14935612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 43184656 - 43184593
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaa 84  Q
    ||||||||||||||||||||||| ||||| ||| ||||| ||| ||||||  ||||||||||||    
T  43184656 aagatatttaaactcaaaattacacattgatatacgtaactggatcaactgtgtcacttattaa 43184593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 8496764 - 8496686
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||||||| |||||| ||| |||||| |||||||||   |||  ||||| |||||||||||||||    
T  8496764 aagatatttaagctcaaaattatgcattgatatacgtaatagggtcaactgtatcatgtattatgggacggaggaagta 8496686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 11756961 - 11757039
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||| || |||||||||| ||||||| ||||||||| | |||||||  ||||  |||||||||||||||| ||||    
T  11756961 aagatattcaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggacggagggagta 11757039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 29616204 - 29616126
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||||||| |||| |||||||||||| || ||||||  ||||  ||||| |||||||||| ||||    
T  29616204 aagatatttaagctcaaaattatgcatcggtatgcgtaataggatcaactgtgtcatgtattatgggacggagggagta 29616126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 43049147 - 43049069
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||||||| ||||||  ||||||||| | |||||||  |||| ||||||||| ||||||| ||||    
T  43049147 aagatatttaagctcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaaggtacggagggagta 43049069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 37094315 - 37094388
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggagg 94  Q
    ||||||||||| |||||||||| ||||||  || |||||| | |||||||  |||| |||||||||||||||||    
T  37094315 aagatatttaagctcaaaattatgcattgaaatacgtaatggagtcaactgtgtcatttattaagggacggagg 37094388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 3379346 - 3379310
Alignment:
Q  152 taatcaactatagttagttgatagataaactagagtt 188  Q
    |||||||||||||||||||||||| ||||||||||||    
T  3379346 taatcaactatagttagttgatagttaaactagagtt 3379310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 5567425 - 5567461
Alignment:
Q  152 taatcaactatagttagttgatagataaactagagtt 188  Q
    |||||||||||||||||||||||| ||||||||||||    
T  5567425 taatcaactatagttagttgatagctaaactagagtt 5567461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 27302045 - 27302092
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaa 68  Q
    |||||||||||||||||||||| ||||||  ||||||||| |||||||    
T  27302045 aagatatttaaactcaaaattatgcattgacatgcgtaatagggtcaa 27302092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 38036736 - 38036658
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||| ||| ||||||  |||||||||  ||||||||  ||||  |||||||||||||||| ||||    
T  38036736 aagatatttaagctcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacggagggagta 38036658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 2805511 - 2805466
Alignment:
Q  64 gtcaactaggtcacttattaagggacggaggaagta-gtatttttt 108  Q
    ||||||||||||| ||||||||||||||||| |||| |||||||||    
T  2805511 gtcaactaggtcatttattaagggacggagggagtatgtatttttt 2805466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 30224229 - 30224265
Alignment:
Q  152 taatcaactatagttagttgatagataaactagagtt 188  Q
    |||||||||||||||||||||||  ||||||||||||    
T  30224229 taatcaactatagttagttgataagtaaactagagtt 30224265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 9e-36; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 1098358 - 1098442
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtattt 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  1098358 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttgttaagggacggaggaagtaatattt 1098442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 30351952 - 30351872
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagt 101  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| | ||||||    
T  30351952 aagatatttaaactcaaaattacgcattggtatacgtaatttggtcaactaggtcacttattaagggacggatggagtagt 30351872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 1831533 - 1831616
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtatt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||| ||||| |||||||||    
T  1831533 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaaaggaaggagggagtagtatt 1831616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 21 - 108
Target Start/End: Complemental strand, 31191058 - 31190971
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtatttttt 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| |||| ||| ||||    
T  31191058 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtatcacttattaagggacggagggagtaatatatttt 31190971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 40317000 - 40317083
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtatt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||| ||||| |||||||||    
T  40317000 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaaaggaaggagggagtagtatt 40317083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 1781026 - 1780948
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||| ||||    
T  1781026 aagatatttaaactcaaaattacgcattggtatgagtaattgggtcaactgtgtcacttattaagggacggagggagta 1780948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 9936769 - 9936691
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  9936769 aagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 9936691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 14607439 - 14607361
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  14607439 aagatatttaaactcaaaattacgcattagtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 14607361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 20023043 - 20023121
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||| ||||    
T  20023043 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattgagggacggagggagta 20023121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 20040296 - 20040218
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  20040296 aagatatttaaattcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 20040218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 30721566 - 30721488
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  30721566 aagatatttaaactcaaatttacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 30721488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 41410541 - 41410458
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtatt 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||| ||| ||||| |||||||||    
T  41410541 aagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtcacttattaaaggaaggagggagtagtatt 41410458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 14057891 - 14057969
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |  |||||||||||||||||||||| ||||    
T  14057891 aagatatttaaactcaaaattacgcattggtatgcataattgggtcaattgtgtcacttattaagggacggagggagta 14057969  T

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Target: chr5; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 14633190 - 14633262
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggag 93  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||| |||||    
T  14633190 aagatatttaaactcaaaattacgcattggtatgcgtaattaggtcaactgtgtcacttattaaggggcggag 14633262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 19344577 - 19344502
Alignment:
Q  24 atatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||| |||||||| ||||    
T  19344577 atatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcatttattaagagacggagggagta 19344502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 41263010 - 41262932
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |  ||||||||||||| |||||||| ||||    
T  41263010 aagatatttaaactcaaatttacgcattggtatgcgtaattgggtcaattgtgtcacttattaagagacggagggagta 41262932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 13548396 - 13548464
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggac 89  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||||| |  |||||||||||||||||    
T  13548396 aagatatttaaactcaaaattacgtattgatatgcgtaattgagtcaattgtgtcacttattaagggac 13548464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 27675720 - 27675801
Alignment:
Q  18 tttaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||| |||||||||| ||||||  ||||||||| | |||||||  |||| ||||||||||||||||| ||||    
T  27675720 tttaagatatttaagctcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaagggacggagggagta 27675801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 30211622 - 30211564
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcactt 79  Q
    ||||||||||||||||||||||||||||||||| | ||||||| ||||||  |||||||    
T  30211622 aagatatttaaactcaaaattacgcattggtattcctaattggatcaactgtgtcactt 30211564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 33402472 - 33402427
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtc 66  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  33402472 aagatatttaaactcaaaattacacattgatatgcgtaattgggtc 33402427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 39787294 - 39787255
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  39787294 gaataatcaactatagttagttgataggtaaactagagtt 39787255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 1831247 - 1831328
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagta 102  Q
    ||||||||||| |||||| ||| ||||||  |||||||||   ||||||| |||||  |||||||||||||||| |||||||    
T  1831247 aagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgggtcaagtattaagggacggagggagtagta 1831328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 40316714 - 40316795
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagta 102  Q
    ||||||||||| |||||| ||| ||||||  |||||||||   ||||||| |||||  |||||||||||||||| |||||||    
T  40316714 aagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgggtcaagtattaagggacggagggagtagta 40316795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 41410827 - 41410746
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagta 102  Q
    ||||||||||| |||||| ||| ||||||  |||||||||   ||||||| |||||  |||||||||||||||| |||||||    
T  41410827 aagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgggtcaagtattaagggacggagggagtagta 41410746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 40080164 - 40080236
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggag 93  Q
    ||||||||||| ||||||||||  |||||| ||||||||| | |||||||  |||| ||||||||||| ||||    
T  40080164 aagatatttaagctcaaaattatacattggaatgcgtaatagagtcaactgtgtcatttattaagggatggag 40080236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 14140101 - 14140140
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaat 60  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  14140101 aagatatttaaactcaaaattatgcattggaatgcgtaat 14140140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 103
Target Start/End: Original strand, 37304371 - 37304410
Alignment:
Q  64 gtcaactaggtcacttattaagggacggaggaagtagtat 103  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  37304371 gtcaactaggtcacttattcagggacggagggagtagtat 37304410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 34170015 - 34170085
Alignment:
Q  24 atatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggagg 94  Q
    |||||||| ||||||||||  |||| | ||||||||||| |||||||  ||||  ||||||||||||||||    
T  34170015 atatttaagctcaaaattatacattagaatgcgtaattgagtcaactgtgtcatgtattaagggacggagg 34170085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 25076351 - 25076315
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactaga 185  Q
    ||||||||||||||||||||||||||| | |||||||    
T  25076351 gaataatcaactatagttagttgataggttaactaga 25076315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 25134320 - 25134284
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactaga 185  Q
    ||||||||||||||||||||||||||| | |||||||    
T  25134320 gaataatcaactatagttagttgataggttaactaga 25134284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 107
Target Start/End: Original strand, 28319856 - 28319884
Alignment:
Q  79 tattaagggacggaggaagtagtattttt 107  Q
    |||||||||||||||||||||||||||||    
T  28319856 tattaagggacggaggaagtagtattttt 28319884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 40512906 - 40512950
Alignment:
Q  64 gtcaactaggtcacttattaagggacggaggaagtagtatttttt 108  Q
    ||||||||||||||||||| ||||||||||| |||| | ||||||    
T  40512906 gtcaactaggtcacttatttagggacggagggagtactttttttt 40512950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 2913080 - 2913158
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2913080 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggagggagta 2913158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 6142392 - 6142314
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  6142392 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 6142314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 16969562 - 16969640
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  16969562 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 16969640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 6188544 - 6188468
Alignment:
Q  18 tttaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggagg 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||    
T  6188544 tttaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaaggaacggagg 6188468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 2667210 - 2667131
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtag 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||    
T  2667210 aagatatttaaactcaaaattacgcattggtatgcgtaattaggtcaactgtgtcacttattaagggacggagggagtag 2667131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 21 - 108
Target Start/End: Complemental strand, 17496213 - 17496126
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtatttttt 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||| ||||  |||||||    
T  17496213 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggatggagggagtatcatttttt 17496126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 995746 - 995824
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  995746 aagatatttaaactcaaaattactcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 995824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 2397953 - 2398031
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  2397953 aagatatttaaacttaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 2398031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 29514912 - 29514825
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtatttttta 109  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |  |||||||||||||||||||||| |||| |||||||||    
T  29514912 aagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaattgtgtcacttattaagggacggagggagta-tatttttta 29514825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 24825348 - 24825429
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagta 102  Q
    ||||||||||||||||||||||| ||||| |||||||||||| ||||||| | ||||||||||||||||||||| |||||||    
T  24825348 aagatatttaaactcaaaattacacattgatatgcgtaattgagtcaactggatcacttattaagggacggagggagtagta 24825429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 32541362 - 32541289
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggagg 94  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||| |||||||||    
T  32541362 aagatatttaaactcaaaattacgcattaatatgcgtaattgggtcaactagatcacttattaaaggacggagg 32541289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 24798431 - 24798351
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||  |||||||||||||| ||||||| ||||||    
T  24798431 aagatatttaaactcaaaattacgcattggtatgcgtaattgaatcaactgtgtcacttattaaggaacggagggagtagt 24798351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 2141751 - 2141829
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||  |||| |||||||| |||||||| ||||    
T  2141751 aagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtcatttattaagagacggagggagta 2141829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 9023023 - 9023101
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||  ||||||||||||||||||||||||||||||| ||||||  ||||||| |||||||||||||||||||    
T  9023023 aagatatttactctcaaaattacgcattggtatgcgtaattggatcaactgtgtcacttgttaagggacggaggaagta 9023101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 2656555 - 2656492
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaa 84  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||  ||||||||||||    
T  2656555 aagatatttaaacttaaaattacgcattggtatgcgtaatttggtcaactgtgtcacttattaa 2656492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 33348022 - 33347944
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||||| |||||  ||||||||||||||||||||  ||||  ||||||| |||||||||||||    
T  33348022 aagatatttaaactcaaaattatgcattaatatgcgtaattgggtcaactgtgtcatgtattaagtgacggaggaagta 33347944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 30699445 - 30699518
Alignment:
Q  22 agatatttaaactcaaaattacgcatt-ggtatgcgtaattgggtcaactaggtcacttattaagggacggagg 94  Q
    ||||||||||||||||||||||||||| ||||| ||||||| ||||||||  |||||||||||||||| |||||    
T  30699445 agatatttaaactcaaaattacgcattgggtatacgtaatttggtcaactgtgtcacttattaagggatggagg 30699518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 35117459 - 35117537
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||||||| ||||| |||||||||||||||||||||  ||||  ||||||| |||||||| ||||    
T  35117459 aagatatttaagctcaaaattatgcattagtatgcgtaattgggtcaactgtgtcatgtattaagtgacggagggagta 35117537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 15866576 - 15866615
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  15866576 gaataatcaactatagttagttgataggtaaactagagtt 15866615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 15868388 - 15868427
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  15868388 gaataatcaactatagttagttgataggtaaactagagtt 15868427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 32079906 - 32079945
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  32079906 gaataatcaactatagttagttgataggtaaactagagtt 32079945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 33869242 - 33869281
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  33869242 gaataatcaactatagttagttgataggtaaactagagtt 33869281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 188
Target Start/End: Original strand, 33866096 - 33866134
Alignment:
Q  150 aataatcaactatagttagttgatagataaactagagtt 188  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  33866096 aataatcaactatagttagttgataggtaaactagagtt 33866134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 107
Target Start/End: Original strand, 2310479 - 2310508
Alignment:
Q  78 ttattaagggacggaggaagtagtattttt 107  Q
    ||||||||||||||||||||||||||||||    
T  2310479 ttattaagggacggaggaagtagtattttt 2310508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 5376876 - 5376912
Alignment:
Q  152 taatcaactatagttagttgatagataaactagagtt 188  Q
    |||||||||||||||||||||||  ||||||||||||    
T  5376876 taatcaactatagttagttgataagtaaactagagtt 5376912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 5378731 - 5378767
Alignment:
Q  152 taatcaactatagttagttgatagataaactagagtt 188  Q
    |||||||||||||||||||||||  ||||||||||||    
T  5378731 taatcaactatagttagttgataagtaaactagagtt 5378767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 10385031 - 10385109
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10385031 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggagggagta 10385109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 46608397 - 46608475
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  46608397 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 46608475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 48380939 - 48381017
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  48380939 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 48381017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 28914551 - 28914622
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacgga 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  28914551 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacgga 28914622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 3708436 - 3708514
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| ||||    
T  3708436 aagatatttaaactcaaaattacgcattggtatgcgtaattgggttaactgtgtcacttattaagggacggagggagta 3708514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 39332710 - 39332640
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacgg 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  39332710 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacgg 39332640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 43447348 - 43447426
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||| ||||    
T  43447348 aagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtgtcacttattaagggacggagggagta 43447426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 31152847 - 31152922
Alignment:
Q  24 atatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  31152847 atatttaaactcaaaattacacattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 31152922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 8525296 - 8525218
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||||| ||||    
T  8525296 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaaccgtgtcacttattcagggacggagggagta 8525218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 40411488 - 40411410
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||| ||||    
T  40411488 aagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtatcacttattaagggacggagggagta 40411410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 43047570 - 43047648
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||| |||| ||||    
T  43047570 aagatatttaaactcaaaattacgcatgggtatgcgtaattggatcaactagatcacttattaagggacagagggagta 43047648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 48652655 - 48652733
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||| ||||    
T  48652655 aagatatttaaactcaaaattacacattggtatccgtaattgggtcaactgtgtcacttattaagggacggagggagta 48652733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 55631755 - 55631677
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||| ||| ||||    
T  55631755 aagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtcacttattaagggacgaagggagta 55631677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 39171141 - 39171219
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||   ||||||||||||||||||||| ||||    
T  39171141 aagatatttaaactcaaaatcacgcattggtatgcgtaattaggtcaactgtatcacttattaagggacggagggagta 39171219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 37164200 - 37164278
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||||||| ||||||||||||||||| |||||||||  ||||  ||||| |||||||||||||||    
T  37164200 aagatatttaagctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatgtattatgggacggaggaagta 37164278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 37667654 - 37667576
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| ||||  |||||||||||| ||| ||||| ||||    
T  37667654 aagatatttaaactcaaaattgcgcattggcatgcgtaattgggttaactgtgtcacttattaaaggatggagggagta 37667576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 6520618 - 6520696
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||||||| ||||||  || |||||||| |||||||  |||| ||||||||||||||||||||||    
T  6520618 aagatatttaagctcaaaattatgcattgaaatacgtaattgagtcaactttgtcatttattaagggacggaggaagta 6520696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 29821233 - 29821305
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggag 93  Q
    ||||||||||| |||||||||| ||||||||||||||||| |||||||||  ||||  ||||| |||||||||    
T  29821233 aagatatttaagctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatgtattatgggacggag 29821305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 28988274 - 28988196
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||||||| ||||||| ||||||||| | |||||||  ||||  |||||||||||||||| ||||    
T  28988274 aagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggacggagggagta 28988196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 51306114 - 51306036
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||||| ||||||  ||||||||| | |||||||  |||| |||||||||||| |||| ||||    
T  51306114 aagatatttaaactcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaagggacagagggagta 51306036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 23985770 - 23985809
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  23985770 gaataatcaactatagttagttgataggtaaactagagtt 23985809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 52545336 - 52545297
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  52545336 gaataatcaactatagttagttgataggtaaactagagtt 52545297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 1377991 - 1378069
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||||||| ||||||| ||||||||| | |||||||  ||||  |||||||||| ||||| ||||    
T  1377991 aagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggatggagggagta 1378069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 24505694 - 24505783
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtattttttat 110  Q
    ||||||||||| |||||| ||| | ||||  |||||||||  ||||||||| ||||  |||||||||||||||| |||| ||| ||||||    
T  24505694 aagatatttaagctcaaagttatgtattgacatgcgtaataaggtcaactatgtcaagtattaagggacggagggagtattatattttat 24505783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 18656107 - 18656143
Alignment:
Q  152 taatcaactatagttagttgatagataaactagagtt 188  Q
    |||||||||||||||||||||||| ||||||||||||    
T  18656107 taatcaactatagttagttgatagctaaactagagtt 18656143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 49768671 - 49768715
Alignment:
Q  64 gtcaactaggtcacttattaagggacggaggaagtagtatttttt 108  Q
    ||||||||||||| ||||||||||||||| |||||| ||||||||    
T  49768671 gtcaactaggtcatttattaagggacggatgaagtattatttttt 49768715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 18320074 - 18320113
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  18320074 gaataatcaactatagttaattgataggtaaactagagtt 18320113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 18395869 - 18395830
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||||||||||| ||||||| ||||    
T  18395869 gaataatcaactatagttagttgataggtaaactatagtt 18395830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 18398609 - 18398570
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  18398609 gaataatcaactatagttaattgataggtaaactagagtt 18398570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 99
Target Start/End: Complemental strand, 20678623 - 20678588
Alignment:
Q  64 gtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||| ||||||||||||||||||||||    
T  20678623 gtcaactaggtcatttattaagggacggaggaagta 20678588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 24807420 - 24807459
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  24807420 gaataatcaactatagttagttgataggtaaattagagtt 24807459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 4271894 - 4271816
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||| ||| ||||||| |||||||||  ||||||||  ||||  ||||| |||||||||| ||||    
T  4271894 aagatatttaagctcaaagttatgcattggcatgcgtaataaggtcaactgtgtcaagtattatgggacggagggagta 4271816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 23605782 - 23605704
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||  ||||||||| ||||||| ||||||||| | |||||||  ||||  |||||| ||||||||| ||||    
T  23605782 aagatatttaagttcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaaaggacggagggagta 23605704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 28898951 - 28898873
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||||||| ||||||| |||| |||| | |||||||   |||  |||||||||||||||| ||||    
T  28898951 aagatatttaagctcaaaattatgcattggaatgcataatggagtcaactgtatcatatattaagggacggagggagta 28898873  T

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Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 1981261 - 1981212
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaact 70  Q
    |||||||||||||||||||||| ||||||  ||||||||  |||||||||    
T  1981261 aagatatttaaactcaaaattatgcattgacatgcgtaagagggtcaact 1981212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 7738854 - 7738817
Alignment:
Q  64 gtcaactaggtcacttattaagggacggaggaagtagt 101  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  7738854 gtcaactaggtcatttattaagggacggagggagtagt 7738817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 31657237 - 31657168
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacg 90  Q
    ||||||||||| |||||||||| ||||||  |||||||| || |||||||   ||| |||||||||||||    
T  31657237 aagatatttaagctcaaaattatgcattgaaatgcgtaaatgagtcaactgtatcatttattaagggacg 31657168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 1613098 - 1613050
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaac 69  Q
    |||||||||||||||||||||| | ||||  ||||||||| ||||||||    
T  1613098 aagatatttaaactcaaaattatgtattgacatgcgtaatagggtcaac 1613050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 3442379 - 3442335
Alignment:
Q  64 gtcaactaggtcacttattaagggacggaggaagtagtatttttt 108  Q
    ||||||||||||| ||||||||||||||||| |||| || |||||    
T  3442379 gtcaactaggtcatttattaagggacggagggagtattagttttt 3442335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 7040360 - 7040396
Alignment:
Q  152 taatcaactatagttagttgatagataaactagagtt 188  Q
    |||||||||||||||||||||||  ||||||||||||    
T  7040360 taatcaactatagttagttgataagtaaactagagtt 7040396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 17494017 - 17494053
Alignment:
Q  63 ggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  17494017 ggtcaaataggtcacttattaagggacggagggagta 17494053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 23564907 - 23564871
Alignment:
Q  152 taatcaactatagttagttgatagataaactagagtt 188  Q
    |||||||||||||||||||||||  ||||||||||||    
T  23564907 taatcaactatagttagttgataagtaaactagagtt 23564871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 40071485 - 40071449
Alignment:
Q  63 ggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  40071485 ggtcaaataggtcacttattaagggacggagggagta 40071449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 50685106 - 50685174
Alignment:
Q  24 atatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacgga 92  Q
    ||||||||  |||||||||  |||||||||||||||| |||||||||  ||||  ||||| ||||||||    
T  50685106 atatttaagttcaaaattatacattggtatgcgtaatagggtcaactgtgtcaagtattatgggacgga 50685174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 51744755 - 51744791
Alignment:
Q  70 taggtcacttattaagggacggaggaagtagtatttt 106  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  51744755 taggtcacttatttagggacggagggagtagtatttt 51744791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 52518758 - 52518794
Alignment:
Q  152 taatcaactatagttagttgatagataaactagagtt 188  Q
    |||||||||||||||||||||||  ||||||||||||    
T  52518758 taatcaactatagttagttgataagtaaactagagtt 52518794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 52520600 - 52520636
Alignment:
Q  152 taatcaactatagttagttgatagataaactagagtt 188  Q
    |||||||||||||||||||||||  ||||||||||||    
T  52520600 taatcaactatagttagttgataagtaaactagagtt 52520636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 9484779 - 9484857
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  9484779 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaaggaactgaggaagta 9484857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 106
Target Start/End: Original strand, 29720578 - 29720663
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtatttt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| | |||||||||||    
T  29720578 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggaaggagtagtatttt 29720663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 42098503 - 42098422
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagta 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||    
T  42098503 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagtagta 42098422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 53274871 - 53274798
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggagg 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  53274871 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactagatcacttattaagggacggagg 53274798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 900964 - 900884
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagt 101  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  900964 aagatatttaaactcaaaattacgcattggtatgcgtaatttggtcaactgtgtcacttattaagggacggaggaagtagt 900884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 38878354 - 38878276
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  38878354 aagatatttaaactcaaaattacgcattgatatacgtaattggatcaactaggtcacttattaagggacggaggaagta 38878276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 48927678 - 48927600
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  48927678 aagatatttaaactcaaaattacgcattggtatgcgtaattggatcaactaggtcacttattaagggatggagggagta 48927600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 49076302 - 49076224
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||    
T  49076302 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactagatcacttattaaggaacggagggagta 49076224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 20144798 - 20144725
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggagg 94  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  20144798 aagatatttaaactcaaaattacgcattggtatgcgtaattggatcaactagatcacttattaagggacggagg 20144725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 12250486 - 12250556
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacgg 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  12250486 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcagctagatcacttattaagggacgg 12250556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 29455584 - 29455506
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||| ||||    
T  29455584 aagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtgtcacttattaagggacggagggagta 29455506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 16434733 - 16434655
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||| ||| ||||    
T  16434733 aagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtcacttattaagggacgaagggagta 16434655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 34263580 - 34263502
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||| ||||    
T  34263580 aagatatttaaactcaaaattacgcattggtatgcgtaattggatcaactgtatcacttattaagggacggagggagta 34263502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 34555334 - 34555412
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||| ||||    
T  34555334 aagatatttaaactcaaaattacgcattggtatgcataattgggccaactgtgtcacttattaagggacggagggagta 34555412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 50673860 - 50673946
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtattttt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||| |||||||| |||| |||||||    
T  50673860 aagatatttaaactcaaaattacgcattggtatgcgtaattggatcaactgtgtcacttgttaagtgacggagggagtaatattttt 50673946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 29793257 - 29793176
Alignment:
Q  18 tttaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||  |||||||||||||||||| ||| ||||    
T  29793257 tttaagatatttaaactcaaaattatgcattggtatgcgtaattgggttaactgtgtcacttattaagggacgaagggagta 29793176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 46866529 - 46866604
Alignment:
Q  24 atatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||||||||||||| ||||    
T  46866529 atatttaaactcaaaattacgcattggtatgcgtaattgggtcaattgtatcacttattaagggacggagggagta 46866604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 12948223 - 12948301
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||  ||||||||||||| |||||||| ||||    
T  12948223 aagatatttaaactcaaaattatgcattggtatgcgtaattggatcaactgtgtcacttattaagagacggagggagta 12948301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 38833589 - 38833517
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggag 93  Q
    ||||||||||||||||||||||||||||  |||| |||| ||||||||||| |||||||||||||||||||||    
T  38833589 aagatatttaaactcaaaattacgcattaatatgtgtaaatgggtcaactatgtcacttattaagggacggag 38833517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 14750936 - 14750858
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||  ||||  |||||||||||||||| ||||    
T  14750936 aagatatttaaactcaaaattacgcattggtatgcgtaactggatcaactgtgtcatgtattaagggacggagggagta 14750858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 29444929 - 29444851
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||| ||||||||||||||||||||  |||||| ||||||||  ||||||||||||| |||||||| ||||    
T  29444929 aagatatttaaattcaaaattacgcattggtatatgtaatttggtcaactgtgtcacttattaagagacggagggagta 29444851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 34669791 - 34669869
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||| ||||  ||||||| ||||||  |||||||||||| ||||||||| ||||    
T  34669791 aagatatttaaactcaaaattacgcattgatatgtataattggatcaactgtgtcacttattaaaggacggagggagta 34669869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 2643146 - 2643067
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtag 100  Q
    ||||||||||| |||||||||| ||||||| ||||||||| | |||||||| ||||  |||||||||||||||| |||||    
T  2643146 aagatatttaagctcaaaattatgcattggcatgcgtaatggagtcaactatgtcatgtattaagggacggagggagtag 2643067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 4229064 - 4228986
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||||| ||||||| ||||||||| | ||||||   ||||  |||||||||| ||||| ||||    
T  4229064 aagatatttaaactcaaaattatgcattggaatgcgtaatggagtcaaccgtgtcatgtattaagggatggagggagta 4228986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 33462888 - 33462966
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||||||| ||||||| |||| |||| |||||||||  | ||  ||||| |||||||||||||||    
T  33462888 aagatatttaagctcaaaattatgcattggcatgcataatagggtcaactgtggcatgtattatgggacggaggaagta 33462966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 36179012 - 36178963
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaact 70  Q
    ||||||||||||||||||||||||||||  ||| ||||||||| ||||||    
T  36179012 aagatatttaaactcaaaattacgcattaatatacgtaattggatcaact 36178963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 7460046 - 7460086
Alignment:
Q  64 gtcaactaggtcacttattaagggacggaggaagtagtatt 104  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  7460046 gtcaactaggtcatttatttagggacggaggaagtagtatt 7460086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 29809527 - 29809599
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggag 93  Q
    ||||||||||| |||||||||| ||||||| ||||||||| | || ||||  ||||  |||||||||||||||    
T  29809527 aagatatttaagctcaaaattatgcattggaatgcgtaatggagttaactgtgtcatgtattaagggacggag 29809599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 38492087 - 38492043
Alignment:
Q  64 gtcaactaggtcacttattaagggacggaggaagtagtatttttt 108  Q
    ||||||||||||||||||| ||||||||||| |||| ||||||||    
T  38492087 gtcaactaggtcacttattcagggacggagggagtactatttttt 38492043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 43399006 - 43399058
Alignment:
Q  18 tttaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaact 70  Q
    ||||||||||||||||||||||||| | |||| |||||||||| || ||||||    
T  43399006 tttaagatatttaaactcaaaattatgtattgatatgcgtaataggatcaact 43399058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 28958875 - 28958796
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtag 100  Q
    |||||||||||||||||||||| |||||   ||||||||| | || ||||  ||||  |||||||||||||||| |||||    
T  28958875 aagatatttaaactcaaaattatgcattaaaatgcgtaatggagttaactgtgtcatgtattaagggacggagggagtag 28958796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 49818940 - 49819030
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtattttttatat 112  Q
    ||||||||||| |||||||||| ||||||  |||| |||| | |||||||  ||||  |||||||||||||||| |||| | ||||||||||    
T  49818940 aagatatttaagctcaaaattatgcattgaaatgcataatggagtcaactgtgtcatgtattaagggacggagggagta-tgttttttatat 49819030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 4945727 - 4945649
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||||||| ||||||| |||||| || | ||||| |  ||||  |||||||||||||||| ||||    
T  4945727 aagatatttaagctcaaaattatgcattggaatgcgtgatggagtcaattgtgtcatgtattaagggacggagggagta 4945649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 32961432 - 32961478
Alignment:
Q  24 atatttaaactcaaaattacgcattggtatgcgtaattgggtcaact 70  Q
    ||||||||||||||||||| ||||||  ||||||||| |||||||||    
T  32961432 atatttaaactcaaaattatgcattgacatgcgtaatagggtcaact 32961478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 34680365 - 34680443
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| ||||||||||  |||||| || |||||| | |||||||  ||||  |||||||||||||||| ||||    
T  34680365 aagatatttaagctcaaaattatacattggaatacgtaatagagtcaactgtgtcatgtattaagggacggagggagta 34680443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 1778541 - 1778621
Alignment:
Q  18 tttaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||| |||||||||| ||||||| || |||||| | |||||||  ||||  || ||||||||||||| ||||    
T  1778541 tttaagatatttaagctcaaaattatgcattggaatacgtaatggagtcaactgtgtcatgta-taagggacggagggagta 1778621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 18013346 - 18013297
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaact 70  Q
    ||||||||||| ||| |||||| ||||| |||||||||||||| ||||||    
T  18013346 aagatatttaagctctaaattatgcatttgtatgcgtaattggatcaact 18013297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 17403015 - 17402979
Alignment:
Q  152 taatcaactatagttagttgatagataaactagagtt 188  Q
    |||||||||||||||||||||||  ||||||||||||    
T  17403015 taatcaactatagttagttgataagtaaactagagtt 17402979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 40497037 - 40497073
Alignment:
Q  63 ggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  40497037 ggtcaaataggtcacttattaagggacggagggagta 40497073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 48169988 - 48170024
Alignment:
Q  63 ggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  48169988 ggtcaaataggtcacttattaagggacggagggagta 48170024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 49057891 - 49057855
Alignment:
Q  64 gtcaactaggtcacttattaagggacggaggaagtag 100  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  49057891 gtcaactaggtcatttattgagggacggaggaagtag 49057855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 50676737 - 50676773
Alignment:
Q  63 ggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  50676737 ggtcaaataggtcacttattaagggacggagggagta 50676773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 36035869 - 36035947
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36035869 aagatatttaaacttaaaattacacattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 36035947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 45299502 - 45299580
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  45299502 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggaggaagta 45299580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 52749464 - 52749536
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggag 93  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  52749464 aagatatttaaactcaaaattacgcattggtatgtgtaattgggtcaactaggtcacttattaagggacggag 52749536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 5606276 - 5606198
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  5606276 aagatatttaaactcaaaattaagcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 5606198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 5945948 - 5946026
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||| ||||    
T  5945948 aagatatttaaactcaaaattacgcattggtatgcgtaattaggtcaactagatcacttattaagagacggagggagta 5946026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 7075215 - 7075141
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggagga 95  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  7075215 aagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcacttattaagggacggagga 7075141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 108
Target Start/End: Original strand, 44741526 - 44741613
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtatttttt 108  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||  |||||||||||||||||||||| ||||  |||||||    
T  44741526 aagatatttaaactcaaaattacgcattgatatgcgtaattggatcaactgtgtcacttattaagggacggagggagtacaatttttt 44741613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 10100395 - 10100320
Alignment:
Q  24 atatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||  |||||||||||||||||||||| ||||    
T  10100395 atatttaaactcaaaattacgcattgatatgcgtaattaggtcaactgtgtcacttattaagggacggagggagta 10100320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 10124295 - 10124370
Alignment:
Q  24 atatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||  |||||||||||||||||||||| ||||    
T  10124295 atatttaaactcaaaattacgcattgatatgcgtaattgagtcaactgtgtcacttattaagggacggagggagta 10124370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 2138914 - 2138836
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||  || ||||||||| ||||||||| ||||    
T  2138914 aagatatttaaactcaaaattacacattggtatgcgtaattgggtcaactgtgttacttattaaaggacggagggagta 2138836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 8250728 - 8250650
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||||||||  |||||||||||||||||||||| ||||    
T  8250728 aagatatttaaactcaaaattatgcattggtatacgtaattaggtcaactgtgtcacttattaagggacggagggagta 8250650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 26544051 - 26544129
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||  |||||||||||| ||||||||| ||||    
T  26544051 aagatatttaaactcaaaattacgcattgatatgcgtaatcgggtcaactgtgtcacttattaaaggacggagggagta 26544129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 31651786 - 31651706
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagt 101  Q
    ||||||||||| |||||||||| ||||||||||||||||| |||||||||  |||| |||||| |||||||||| ||||||    
T  31651786 aagatatttaagctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatttattatgggacggagggagtagt 31651706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 6017334 - 6017256
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||   | |||||||||| |||||||| ||||    
T  6017334 aagatatttaaactcaaaattacgcattggtatgcgtaatttgatcaactgtatgacttattaagagacggagggagta 6017256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 23393415 - 23393493
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||||||| ||||||| ||||||||||| |||||||  |||| ||||||||||||||||| ||||    
T  23393415 aagatatttaagctcaaaattatgcattggcatgcgtaattgagtcaactgtgtcatttattaagggacggagggagta 23393493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 1821514 - 1821436
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||||||| |||||||||| ||||||||||||||||  ||||  ||||||| |||||| ||||||    
T  1821514 aagatatttaagctcaaaattatgcattggtatacgtaattgggtcaactgtgtcatgtattaagagacggaagaagta 1821436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 3282797 - 3282836
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  3282797 gaataatcaactatagttagttgataggtaaactagagtt 3282836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 3284498 - 3284537
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  3284498 gaataatcaactatagttagttgataggtaaactagagtt 3284537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 9312025 - 9312064
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  9312025 gaataatcaactatagttagttgataggtaaactagagtt 9312064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 37664790 - 37664751
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  37664790 gaataatcaactatagttagttgataggtaaactagagtt 37664751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 37674512 - 37674473
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  37674512 gaataatcaactatagttagttgataggtaaactagagtt 37674473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 37702182 - 37702221
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  37702182 gaataatcaactatagttagttgataggtaaactagagtt 37702221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 38786831 - 38786752
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtag 100  Q
    |||||||||||||||||||||| | |||| |||||||||| ||||||| |  ||||  ||||| |||||||||| |||||    
T  38786831 aagatatttaaactcaaaattatgtattgatatgcgtaatagggtcaattgtgtcatgtattatgggacggagggagtag 38786752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 43453050 - 43452983
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaaggga 88  Q
    |||||||||||||||||||||| |||||| ||||||||||  ||||||||  ||||  ||||||||||    
T  43453050 aagatatttaaactcaaaattatgcattgatatgcgtaataaggtcaactgtgtcaagtattaaggga 43452983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 44240705 - 44240780
Alignment:
Q  24 atatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||| |||||||||| ||||||  ||||||||||| ||| |||  |||| ||||||||||||||||| ||||    
T  44240705 atatttaagctcaaaattatgcattgaaatgcgtaattgagtccactgtgtcatttattaagggacggagggagta 44240780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 8048633 - 8048555
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| ||||||| || ||||||| ||||||||| | |||||||  ||||  |||||||||||||||| ||||    
T  8048633 aagatatttaagctcaaaaatatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggacggagggagta 8048555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 39354299 - 39354255
Alignment:
Q  64 gtcaactaggtcacttattaagggacggaggaagtagtatttttt 108  Q
    ||||||||||||| ||||||||||||||||| |||||| ||||||    
T  39354299 gtcaactaggtcatttattaagggacggagggagtagtttttttt 39354255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 902073 - 902112
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||| ||||||||||||||||| ||||||||||||    
T  902073 gaataatcatctatagttagttgataggtaaactagagtt 902112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 5925009 - 5924970
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  5925009 gaataatcaactatagttagttgataggtaaattagagtt 5924970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 9310408 - 9310447
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  9310408 gaataatcaactatagttagttgataagtaaactagagtt 9310447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 26476894 - 26476816
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||||| | ||||  |||||||||  ||||||||  ||||  |||||||| ||||||| ||||    
T  26476894 aagatatttaaactcaaaattatgtattgacatgcgtaataaggtcaactgtgtcaagtattaaggaacggagggagta 26476816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 28490343 - 28490421
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||||||| ||||||| ||||||||| | |||||||  |||   |||||| ||||||||| ||||    
T  28490343 aagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcctgtattaaaggacggagggagta 28490421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 41855606 - 41855529
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||  ||||||||| ||||||  ||||||||| | |||||||  |||| ||||||||||||||||| ||||    
T  41855606 aagatatttaag-tcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaagggacggagggagta 41855529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 44963557 - 44963479
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||| ||| | ||||  |||||||||  ||||||||| ||||  |||||||||||||||| ||||    
T  44963557 aagatatttaagctcaaagttatgtattgacatgcgtaataaggtcaactatgtcaagtattaagggacggagggagta 44963479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 50777261 - 50777299
Alignment:
Q  63 ggtcaactaggtcacttattaagggacggaggaagtagt 101  Q
    |||||| ||||||||||||||||||||||||| ||||||    
T  50777261 ggtcaaataggtcacttattaagggacggagggagtagt 50777299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 4489244 - 4489293
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaact 70  Q
    ||||||||||| |||||||||| ||||||| ||||||||| | |||||||    
T  4489244 aagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaact 4489293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 23337989 - 23338038
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaact 70  Q
    |||||||||||||||||||||| ||||||  |||||||||  ||||||||    
T  23337989 aagatatttaaactcaaaattatgcattgacatgcgtaatatggtcaact 23338038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 106
Target Start/End: Original strand, 48389250 - 48389335
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtatttt 106  Q
    ||||||||||| |||||||||| | || |  ||||||||| | |||||||  |||| ||||||| ||||||||| |||| ||||||    
T  48389250 aagatatttaagctcaaaattatgtatcgaaatgcgtaatggagtcaactgtgtcatttattaaaggacggagggagtattatttt 48389335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 16808811 - 16808775
Alignment:
Q  152 taatcaactatagttagttgatagataaactagagtt 188  Q
    |||||||||||||||||||||||  ||||||||||||    
T  16808811 taatcaactatagttagttgataagtaaactagagtt 16808775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 46862820 - 46862856
Alignment:
Q  63 ggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  46862820 ggtcaaataggtcacttattaagggacggagggagta 46862856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 48940675 - 48940711
Alignment:
Q  152 taatcaactatagttagttgatagataaactagagtt 188  Q
    |||||||||||||||||||||||  ||||||||||||    
T  48940675 taatcaactatagttagttgataagtaaactagagtt 48940711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 5559 - 5643
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtattt 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||| |||||    
T  5559 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagtattattt 5643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 8e-30; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 1749052 - 1748974
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  1749052 aagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactaggtcacttattaaaggacggagggagta 1748974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 41319804 - 41319726
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  41319804 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 41319726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 106
Target Start/End: Original strand, 4137592 - 4137677
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtatttt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| | |||||||||| ||||||    
T  4137592 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaaggaatggaggaagtactatttt 4137677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 10333458 - 10333380
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||| ||||    
T  10333458 aagatatttaaactcaaaattacgcattggtatgcgtaatcgggtcaactgtgtcacttattaagggacggagggagta 10333380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 20917807 - 20917729
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  20917807 aagatatttaaactcaaaattacgcattgatatgcgtaattggatcaactaggtcatttattaagggacggagggagta 20917729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 31603297 - 31603219
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||| ||||    
T  31603297 aagatatttaaactcaaaattacgcattggtatgcctaattgggtcaactgtgtcacttattaagggacggagggagta 31603219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 40471919 - 40471997
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||| ||||    
T  40471919 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcatttattaagggacggagggagta 40471997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 41437015 - 41437093
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||| ||||    
T  41437015 aagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtgtcacttattaagggacggagggagta 41437093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 42754235 - 42754157
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  42754235 aagatatttaaactcaaaattacacattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 42754157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 7724490 - 7724405
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtatttt 106  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||| |||||| ||||    
T  7724490 aagatatttaaacccaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacagagggagtagtttttt 7724405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 5096431 - 5096509
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||| ||||    
T  5096431 aagatatttaaactcaaaattacgcattggtatgcgtaattgaatcaactgtgtcacttattaagggacggagggagta 5096509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 38963978 - 38964043
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagg 86  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||  ||||||||||||||    
T  38963978 aagatatttaaactcaaaattacacattggtatgcgtaattgagtcaactgtgtcacttattaagg 38964043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 8373617 - 8373688
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacgga 92  Q
    |||||||||||||| |||||||| ||||| ||| ||||||||||||||||  ||||||||||||||||||||    
T  8373617 aagatatttaaacttaaaattacacattgatatacgtaattgggtcaactgtgtcacttattaagggacgga 8373688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 11277720 - 11277795
Alignment:
Q  24 atatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||   ||||||   ||||||||||||||||||||| ||||    
T  11277720 atatttaaactcaaaattacgcattggtatgcgtaatttcatcaactgtatcacttattaagggacggagggagta 11277795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 20682825 - 20682903
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||||| ||||||  ||||||||| | |||||||  |||| ||||||||||||||||| ||||    
T  20682825 aagatatttaaactcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaagggacggagggagta 20682903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 37317059 - 37317137
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||||||| ||||||| ||||||||| | |||||||  ||||  |||||||||||||||| ||||    
T  37317059 aagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggacggagggagta 37317137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 37987816 - 37987748
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggac 89  Q
    ||||||||||||||||||||||| ||||  ||||||||||| | ||||||  | |||||||||||||||    
T  37987816 aagatatttaaactcaaaattacacattaatatgcgtaattagatcaactgtgccacttattaagggac 37987748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 45036543 - 45036595
Alignment:
Q  18 tttaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaact 70  Q
    ||||||||||||||||| ||||||| |||||||||| |||||| |||||||||    
T  45036543 tttaagatatttaaacttaaaattatgcattggtatacgtaatagggtcaact 45036595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 6729983 - 6729905
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||||||| ||||||| ||||||||| | ||||| |  ||||  |||||||||||||||| ||||    
T  6729983 aagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaagtgtgtcatgtattaagggacggagggagta 6729905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 12209172 - 12209214
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgg 63  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  12209172 aagatatttaaactcaaaattatacattggtatgcgtaattgg 12209214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 16333662 - 16333711
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaact 70  Q
    |||||||||||  ||||||||| |||||||||||||||||| ||||||||    
T  16333662 aagatatttaaggtcaaaattatgcattggtatgcgtaattaggtcaact 16333711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 25627209 - 25627290
Alignment:
Q  24 atatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtattt 105  Q
    |||||||| |||||||||| ||||||  |||| ||||  ||||||||| ||||  |||||||||||||||| |||| |||||    
T  25627209 atatttaagctcaaaattatgcattgtcatgcataataaggtcaactatgtcaagtattaagggacggagggagtactattt 25627290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 16127664 - 16127582
Alignment:
Q  18 tttaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtag 100  Q
    ||||||||||||||  || |||||| ||||||| |||||||||| |||||| |  ||||  |||||||||| ||||| |||||    
T  16127664 tttaagatatttaaggtccaaattatgcattggcatgcgtaattaggtcaattgtgtcatgtattaagggagggagggagtag 16127582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 29194252 - 29194294
Alignment:
Q  63 ggtcaactaggtcacttattaagggacggaggaagtagtattt 105  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||    
T  29194252 ggtcaaataggtcacttattcagggacggagggagtagtattt 29194294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 16125963 - 16125914
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaact 70  Q
    |||||||||||  ||||||||| |||||| ||||||||||| ||||||||    
T  16125963 aagatatttaaggtcaaaattatgcattgatatgcgtaattaggtcaact 16125914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 45080456 - 45080411
Alignment:
Q  63 ggtcaactaggtcacttattaagggacggaggaagtagtatttttt 108  Q
    |||||| ||||||||||||| ||||||||||| |||| ||||||||    
T  45080456 ggtcaaataggtcacttattcagggacggagggagtactatttttt 45080411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 14707570 - 14707534
Alignment:
Q  64 gtcaactaggtcacttattaagggacggaggaagtag 100  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  14707570 gtcaactaggtcatttattaagggacggagggagtag 14707534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 22718423 - 22718335
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtatttttta 109  Q
    ||||||||||| |||||||||| | ||||| ||||||||| | |||||||   |||  ||||||||| |||||| || |||| ||||||    
T  22718423 aagatatttaagctcaaaattatgtattggaatgcgtaatggagtcaactgtatcatgtattaaggggcggagggaggagtacttttta 22718335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 29758119 - 29758155
Alignment:
Q  152 taatcaactatagttagttgatagataaactagagtt 188  Q
    |||||||||||||||||||||||  ||||||||||||    
T  29758119 taatcaactatagttagttgataagtaaactagagtt 29758155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 42038558 - 42038518
Alignment:
Q  64 gtcaactaggtcacttattaagggacggaggaagtagtatt 104  Q
    ||||||||||||||||||| ||||||||||| |||| ||||    
T  42038558 gtcaactaggtcacttatttagggacggagggagtattatt 42038518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 43370938 - 43370974
Alignment:
Q  63 ggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  43370938 ggtcaaataggtcacttattaagggacggagggagta 43370974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 36820061 - 36820137
Alignment:
Q  23 gatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  36820061 gatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 36820137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 38069231 - 38069315
Alignment:
Q  18 tttaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagta 102  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||| |||| |||||||    
T  38069231 tttaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcacttattaagggactgagggagtagta 38069315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 32345664 - 32345593
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacgga 92  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||    
T  32345664 aagatatttaaactcaaaattacgcattggtatgcgtaattgagtcaactgtgtcacttattaagggacgga 32345593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 16807027 - 16806949
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||| |||||||| ||||    
T  16807027 aagatatttaaactcaaaattatgcattggtatgcgtaattgggtcaactgtgtcacttattaagtgacggagggagta 16806949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 27621176 - 27621094
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtat 103  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||  ||| |||||||||||||||||| ||||||||    
T  27621176 aagatatttaaactcaaaattacgcattagtatgcgtaattggatcaactgtgtcgcttattaagggacggagggagtagtat 27621094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 35693711 - 35693633
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||| ||| ||||    
T  35693711 aagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcacttattaagggacgaagggagta 35693633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 40232414 - 40232488
Alignment:
Q  25 tatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  40232414 tatttaaactcaaaattacacattgatatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 40232488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 35265714 - 35265643
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacgga 92  Q
    |||||||||||| ||||||||||||||| |||||||||||||| ||||||  ||||||||||||||||||||    
T  35265714 aagatatttaaattcaaaattacgcattagtatgcgtaattggatcaactgtgtcacttattaagggacgga 35265643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 25273898 - 25273826
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggag 93  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||| |  |||||||||||||||| ||||    
T  25273898 aagatatttaaactcaaaattacgcattgatatgcgtaattggatcaattgtgtcacttattaagggatggag 25273826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 108
Target Start/End: Original strand, 48448701 - 48448788
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtatttttt 108  Q
    ||||||||||| |||||||||| ||||| ||||| |||||||||||||||  ||||  |||||||||| ||||| ||||||| |||||    
T  48448701 aagatatttaagctcaaaattatgcattagtatgtgtaattgggtcaactgtgtcatgtattaagggatggagggagtagtaattttt 48448788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 30462102 - 30462035
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaaggga 88  Q
    |||||||||||||| |||||||||||||||||| | ||||||| ||||||   |||||||||||||||    
T  30462102 aagatatttaaacttaaaattacgcattggtatacataattggatcaactgtatcacttattaaggga 30462035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 37405685 - 37405646
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37405685 gaataatcaactatagttagttgatagataaactagagtt 37405646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 26651129 - 26651051
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||||||| |  |||||||||||||| |||||||||  |||| |||||| |||||||||| ||||    
T  26651129 aagatatttaagctcaaaattatgttttggtatgcgtaatagggtcaactgtgtcatttattatgggacggagggagta 26651051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 32972216 - 32972138
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||||||| ||||| | ||||||||| |  ||||||  |||| ||||||||||||||||| ||||    
T  32972216 aagatatttaagctcaaaattatgcattagaatgcgtaatggaatcaactgtgtcatttattaagggacggagggagta 32972138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 99
Target Start/End: Original strand, 44479946 - 44479981
Alignment:
Q  64 gtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||| ||||||||||||||||    
T  44479946 gtcaactaggtcacttatttagggacggaggaagta 44479981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 107
Target Start/End: Original strand, 47081206 - 47081249
Alignment:
Q  64 gtcaactaggtcacttattaagggacggaggaagtagtattttt 107  Q
    ||||||||||||| ||||||||||||||||| ||||| ||||||    
T  47081206 gtcaactaggtcatttattaagggacggagggagtagcattttt 47081249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 102
Target Start/End: Original strand, 31466584 - 31466622
Alignment:
Q  64 gtcaactaggtcacttattaagggacggaggaagtagta 102  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  31466584 gtcaactaggtcacttatttagggacggagggagtagta 31466622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 37099754 - 37099673
Alignment:
Q  24 atatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagtagtattt 105  Q
    |||||||| |||||||||| ||||||  |||||||||  | ||||||  ||||  ||||| ||||||||||||||| |||||    
T  37099754 atatttaatctcaaaattatgcattgacatgcgtaataagatcaactgtgtcaagtattatgggacggaggaagtaatattt 37099673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 4895583 - 4895619
Alignment:
Q  152 taatcaactatagttagttgatagataaactagagtt 188  Q
    |||||||||||||||||||||||  ||||||||||||    
T  4895583 taatcaactatagttagttgataagtaaactagagtt 4895619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 20046729 - 20046693
Alignment:
Q  152 taatcaactatagttagttgatagataaactagagtt 188  Q
    |||||||||||||||||||||||  ||||||||||||    
T  20046729 taatcaactatagttagttgataagtaaactagagtt 20046693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 28124820 - 28124784
Alignment:
Q  152 taatcaactatagttagttgatagataaactagagtt 188  Q
    |||||||||||||||||||||||  ||||||||||||    
T  28124820 taatcaactatagttagttgataagtaaactagagtt 28124784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 28126647 - 28126611
Alignment:
Q  152 taatcaactatagttagttgatagataaactagagtt 188  Q
    |||||||||||||||||||||||  ||||||||||||    
T  28126647 taatcaactatagttagttgataagtaaactagagtt 28126611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 184149 - 184227
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||||||| ||||    
T  184149 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtatcacttattaaaggacggagggagta 184227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 3163 - 3244
Alignment:
Q  18 tttaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||| |||||||| |||||||||| |||||||||||||||||  ||||||||  ||||  ||||| |||||||||| ||||    
T  3163 tttaatatatttaagctcaaaattatgcattggtatgcgtaatatggtcaactgtgtcatgtattatgggacggagggagta 3244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 6222 - 6261
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  6222 gaataatcaactatagttaattgataggtaaactagagtt 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 39141 - 39180
Alignment:
Q  149 gaataatcaactatagttagttgatagataaactagagtt 188  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  39141 gaataatcaactatagttagttgataagtaaactagagtt 39180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 126 - 48
Alignment:
Q  21 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 99  Q
    ||||||||||| |||||| |||  |||||| |||||||||  ||||||||  ||||  |||||||||||||||| ||||    
T  126 aagatatttaatctcaaagttatacattggcatgcgtaataaggtcaactgtgtcaagtattaagggacggagggagta 48  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 10053 - 10008
Alignment:
Q  63 ggtcaactaggtcacttattaagggacggaggaagtagtatttttt 108  Q
    |||||| ||||||||||||||||||| ||||| |||| ||||||||    
T  10053 ggtcaaataggtcacttattaagggatggagggagtattatttttt 10008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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