View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21042_high_44 (Length: 250)
Name: NF21042_high_44
Description: NF21042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21042_high_44 |
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Alignment Details
Target: chr6 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 16976363 - 16976606
Alignment:
| Q |
1 |
attattatccattgatcagaataaagtttgactccaattcttatccttttattttaagttgatctaaaggctcaaattgattcacttaattctcacaggt |
100 |
Q |
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|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16976363 |
attattatccattgatcagaataaagtttgactcgaattctcatccttttattttaagttgatctaaaggctcaaattgattcacttaattctcacaggc |
16976462 |
T |
|
| Q |
101 |
attgtttgtttcggtggctcttgcgttgttccagcgtgttctatcagatttcatcttcttccaaaacctaattactttttctccatggcacagtttcatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16976463 |
attgtttgtttcggtggctcttgcgttgttccagcgtgttctatcagatttcatcttcttccaaaacctaattactttttctccatggcacagtttcatc |
16976562 |
T |
|
| Q |
201 |
gaagagaaggatattaggttaaatatatttttcagttcatctca |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16976563 |
gaagagaaggatattaggttaaatatatttttcagttcatctca |
16976606 |
T |
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