View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21042_low_35 (Length: 283)
Name: NF21042_low_35
Description: NF21042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21042_low_35 |
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Alignment Details
Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 11 - 260
Target Start/End: Complemental strand, 12678571 - 12678322
Alignment:
| Q |
11 |
cacagaaataaaccctctcaaaccatggtccatcttgcgcacgccgattcaaggacacagatannnnnnnnnnnnnnnnctaaattaccattcatatgca |
110 |
Q |
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| T |
12678571 |
cacagaaataaaccctctcaaaccatggtccatcttgcgcacgccgattcaaggacacagatattttattttattttttctaaattaccattcatatgca |
12678472 |
T |
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| Q |
111 |
aataagtgaataaatcaatgtttacttcttcaagatcacttgcatacaatacattctaagtctaaacccctttctactttgattaggaaaataatcataa |
210 |
Q |
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| T |
12678471 |
aataagtgaataaatcaatgtttacttcttcaagatcacttgcatacaatacattctaagtctaaacccctttccactttgattaggaaaataatcataa |
12678372 |
T |
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| Q |
211 |
aactttatgtaatggctgtttgtttgtaatgcaagaaaagtccaaatatg |
260 |
Q |
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| T |
12678371 |
aactttatgtaatggctgtttgtttgtaatgcaagaaaagtccaaatatg |
12678322 |
T |
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