View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21042_low_36 (Length: 283)
Name: NF21042_low_36
Description: NF21042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21042_low_36 |
 |  |
|
| [»] scaffold0515 (1 HSPs) |
 |  |  |
|
| [»] scaffold0317 (1 HSPs) |
 |  |  |
|
| [»] scaffold0306 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 17 - 260
Target Start/End: Original strand, 36120051 - 36120296
Alignment:
| Q |
17 |
aatgagcggaataataaagtttttaaggctaaggaaaacacaattcaccatatgttcgataaagtcaaggtacattcatttt--ggtggttgaaagctta |
114 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
36120051 |
aatgagcggaataacaaagtttttaaggctaaggaaaacacaattcaccatatgttcgataaagtcaaggtacatttattttttggtggttgaaagctta |
36120150 |
T |
 |
| Q |
115 |
taatgtcaatattgatttaaactctcatgtgatggtcgagcccttttgtttgtatgagcaacgattaagttttcttgtttccctgctttttggtttcgtt |
214 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
36120151 |
taatgtcaatattggtttaaactctaatgtgatggtcgagcccttttgtttgtatgaacatcgattaagttttcttgtttcccagctttttggtttcgtt |
36120250 |
T |
 |
| Q |
215 |
ctgaccgtaaattttagaggttctttatgatacactttgtgttagt |
260 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
36120251 |
ctgaccgtaaactttagaggttctttatgatacactttgtgttagt |
36120296 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 25252659 - 25252817
Alignment:
| Q |
17 |
aatgagcggaataataaagtttttaaggctaaggaaaacacaattcaccatatgttcgataaagtcaaggtacattcattttggtggttgaaagcttata |
116 |
Q |
| |
|
|||||||| ||||||| |||||| ||| ||||||||| |||||||| || || | || |||||||| |||||| |||| ||| |||||||||||| |
|
|
| T |
25252659 |
aatgagcgaaataatagagttttcaagaataaggaaaatacaattcatcagttgctagaaaaagtcaaataacattcttttttatggctgaaagcttata |
25252758 |
T |
 |
| Q |
117 |
atgtcaatattgatttaaactctc--atgtgatggtcgagcccttttgtttgtatgagca |
174 |
Q |
| |
|
|||||||| || || | || || ||||| |||||||||||||||| ||||||||||| |
|
|
| T |
25252759 |
atgtcaatcttagttgtagctttcatatgtgttggtcgagcccttttg-ttgtatgagca |
25252817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 7093365 - 7093212
Alignment:
| Q |
17 |
aatgagcggaataataaagtttttaaggctaaggaaaacacaattcaccatatgttcgataaagtcaaggtacattcattttggtggttgaaagcttata |
116 |
Q |
| |
|
||||||| |||||||||||||| ||| ||||||||| | |||||| || | | || ||||||||| ||||||| |||| |||| ||||||||||| |
|
|
| T |
7093365 |
aatgagcaaaataataaagttttcaagaataaggaaaatataattcatcagctactagaaaaagtcaagttacattcttttttgtggctgaaagcttatg |
7093266 |
T |
 |
| Q |
117 |
atgtcaatattgatttaaactctc--atgtgatggtcgagcccttttgtttgtatg |
170 |
Q |
| |
|
||||| | ||| || ||||| || |||||| |||||||| ||||||||||||| |
|
|
| T |
7093265 |
atgtc--tcttggttcaaactttcatatgtgaaagtcgagccattttgtttgtatg |
7093212 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 18186895 - 18186671
Alignment:
| Q |
17 |
aatgagcggaataataaagtttttaaggctaaggaaaacacaattcaccatatgttcgataaagtcaaggtacattcattttggtggttgaaagcttata |
116 |
Q |
| |
|
|||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
18186895 |
aatgagcggaataatagaggtttcaaggctaaggaaaacacaattcaccagatgttcgataaagtcaagttacattcattttggtggttgaaagcttata |
18186796 |
T |
 |
| Q |
117 |
atgtcaatattgatttaaactctc--atgtgatggtcgagcccttttgtttgtatgagcaacgattaagttttcttgtttccctgctttttggtttcgtt |
214 |
Q |
| |
|
|| ||||| ||| ||||||||||| ||||| |||||||||||||||||||||||| || | | ||||||||||||||||| || ||||| ||||| | |
|
|
| T |
18186795 |
atctcaatcttggtttaaactctcatatgtggtggtcgagcccttttgtttgtatggtcatcaactaagttttcttgtttccttg-ttttttgtttcatc |
18186697 |
T |
 |
| Q |
215 |
ctgaccgtaaattttagaggttcttt |
240 |
Q |
| |
|
|||| |||||||||||||||||||| |
|
|
| T |
18186696 |
ctgaatgtaaattttagaggttcttt |
18186671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 114; Significance: 7e-58; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 17 - 259
Target Start/End: Original strand, 24838460 - 24838704
Alignment:
| Q |
17 |
aatgagcggaataataaagtttttaaggctaaggaaaacacaattcaccatatgttcgataaagtcaaggtacattcattttggtggttgaaagcttata |
116 |
Q |
| |
|
|||||| |||| |||| |||||||||||||||||||||||||||||| || ||||| ||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
24838460 |
aatgagaggaaaaatagagtttttaaggctaaggaaaacacaattcatcagatgttagataaagtcaaattacattcattttggtggttgaaagcttata |
24838559 |
T |
 |
| Q |
117 |
atgtcaatattgatttaaactctc--atgtgatggtcgagcccttttgtttgtatgagcaacgattaagttttcttgtttccctgctttttggtttcgtt |
214 |
Q |
| |
|
|||||||| ||| |||||||||| ||||| ||||||||| |||||||||||||| ||| ||| |||||||||||||||| | ||||||||||||| |
|
|
| T |
24838560 |
atgtcaatcttgggttaaactctcatatgtgttggtcgagctcttttgtttgtatgggcatcgactaagttttcttgtttcttttgtttttggtttcgtg |
24838659 |
T |
 |
| Q |
215 |
ctgaccgtaaattttagaggttctttatgatacactttgtgttag |
259 |
Q |
| |
|
||| ||||| ||| |||||||||| || |||| ||||||||| |
|
|
| T |
24838660 |
ttgattgtaaaattttgaggttctttctggcacaccttgtgttag |
24838704 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 77 - 171
Target Start/End: Complemental strand, 5917255 - 5917159
Alignment:
| Q |
77 |
aaagtcaaggtacattcattttggtggttgaaagcttataatgtcaatattgatttaaactctc--atgtgatggtcgagcccttttgtttgtatga |
171 |
Q |
| |
|
|||||||| ||||||| |||| |||| ||||| |||||||||||||| ||| |||||||| || ||||| |||||||| |||||||||||||||| |
|
|
| T |
5917255 |
aaagtcaaattacattcttttttgtggctgaaaacttataatgtcaattttggtttaaactttcatatgtggtggtcgagaccttttgtttgtatga |
5917159 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 52627359 - 52627275
Alignment:
| Q |
58 |
aattcaccatatgttcgataaagtcaaggtacattcattttggtggttgaaagcttataatgtcaatattgatttaaactctcat |
142 |
Q |
| |
|
||||||||||||||| |||||||||||| ||| |||| |||| ||||||||| |||||||| || || ||| |||||||| |||| |
|
|
| T |
52627359 |
aattcaccatatgtttgataaagtcaagttactttcactttgatggttgaaaacttataatatcgattttggtttaaactatcat |
52627275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 27933733 - 27933626
Alignment:
| Q |
17 |
aatgagcggaataataaagtttttaaggctaaggaaaacacaattcaccatatgttcgataaagtcaaggtacattcattttggtggttgaaagcttata |
116 |
Q |
| |
|
|||||||| ||||||| |||||| ||| ||||||||| |||||||| || | | || ||| ||||| ||||||| ||||||||| |||||| ||||| |
|
|
| T |
27933733 |
aatgagcgaaataatagagttttcaagaataaggaaaatacaattcatcaactactagaaaaaatcaagttacattctttttggtggctgaaagtttata |
27933634 |
T |
 |
| Q |
117 |
atgtcaat |
124 |
Q |
| |
|
|||||||| |
|
|
| T |
27933633 |
atgtcaat |
27933626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 124
Target Start/End: Original strand, 27933471 - 27933518
Alignment:
| Q |
77 |
aaagtcaaggtacattcattttggtggttgaaagcttataatgtcaat |
124 |
Q |
| |
|
||||| ||| ||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
27933471 |
aaagtgaagttacattctttttggtggctgaaagcttataatgtcaat |
27933518 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 38445104 - 38444978
Alignment:
| Q |
17 |
aatgagcggaataataaagtttttaaggctaaggaaaacacaattcaccatatgttcgataaagtcaaggtacattcattttg-gtggttgaaagcttat |
115 |
Q |
| |
|
|||||||| ||||||| |||||| ||| |||||| || |||||||| || |||| || ||||||||| |||||| |||| |||| ||||| ||||| |
|
|
| T |
38445104 |
aatgagcgaaataatagagttttcaagaataaggagaatacaattcatcaactgttagaaaaagtcaagttacattttttttttgtggctgaaaacttat |
38445005 |
T |
 |
| Q |
116 |
aatgtcaatattgatttaaactctcat |
142 |
Q |
| |
|
||||||||| ||| || ||||| |||| |
|
|
| T |
38445004 |
aatgtcaattttggttcaaactttcat |
38444978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 82; Significance: 9e-39; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 15143079 - 15142931
Alignment:
| Q |
20 |
gagcggaataataaagtttttaaggctaaggaaaacacaattcaccatatgttcgataaagtcaaggtacattcattttggtggttgaaagcttataatg |
119 |
Q |
| |
|
||||||||||| | |||||| ||||| ||||||| |||||||||| | ||||| |||||||||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
15143079 |
gagcggaataacagagttttcaaggccaaggaaaccacaattcacgagatgttagataaagtcaagttacattcattttggtggttaaaagcttataatg |
15142980 |
T |
 |
| Q |
120 |
tcaatattgatttaaactctc--atgtgatggtcgagcccttttgtttg |
166 |
Q |
| |
|
||||| ||| ||||||||||| ||||| |||||||||| ||||||||| |
|
|
| T |
15142979 |
tcaatcttggtttaaactctcatatgtggtggtcgagccattttgtttg |
15142931 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 170
Target Start/End: Original strand, 33276719 - 33276873
Alignment:
| Q |
17 |
aatgagcggaataataaagtttttaaggctaaggaaaacacaattcaccatatgttcgataaagtcaaggtacattcattttggtggttgaaagcttata |
116 |
Q |
| |
|
|||||||| ||||||| | ||| ||| ||||||||| |||||||| || |||| || ||||||||| ||||| ||||||||| |||||||||||| |
|
|
| T |
33276719 |
aatgagcgaaataatagaaatttcaagaataaggaaaatacaattcatcagttgttagaaaaagtcaagtcacattt-ttttggtggctgaaagcttata |
33276817 |
T |
 |
| Q |
117 |
atgtcaatattgatttaaactctc--atgtgatggtcgagcccttttgtttgtatg |
170 |
Q |
| |
|
|| ||||| || || ||||| || ||||| |||||||||| ||||||||||||| |
|
|
| T |
33276818 |
atatcaatttttgttcaaactttcatatgtggtggtcgagccattttgtttgtatg |
33276873 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 79; Significance: 6e-37; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 17 - 206
Target Start/End: Original strand, 31852020 - 31852210
Alignment:
| Q |
17 |
aatgagcggaataataaagtttttaaggctaaggaaaacacaattcaccatatgttcgataaagtcaaggtacattcattttggtggttgaaagcttata |
116 |
Q |
| |
|
|||||||||||||| | |||||| |||| |||| |||| ||||||||| | ||||| || ||||||||| |||| |||||||||||||||||| | | || |
|
|
| T |
31852020 |
aatgagcggaataacagagttttcaaggttaagaaaaatacaattcacaagatgttagacaaagtcaagttacactcattttggtggttgaaaacatcta |
31852119 |
T |
 |
| Q |
117 |
atgtcaatattgatttaaactctcatgtg-atggtcgagcccttttgtttgtatgagcaacgattaagttttcttgtttccctgctttttg |
206 |
Q |
| |
|
|||||||| |||| |||||||||||| || ||||||||||| ||||||||||||| || || ||||||||||||||||| || |||||| |
|
|
| T |
31852120 |
atgtcaatcttgacttaaactctcatatgtgtggtcgagcccatttgtttgtatgaacatcggctaagttttcttgtttccttgttttttg |
31852210 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 28350138 - 28350291
Alignment:
| Q |
17 |
aatgagcggaataataaagtttttaaggctaaggaaaacacaattcaccatatgttcga-taaagtcaaggtacattcattttggtggttgaaagcttat |
115 |
Q |
| |
|
|||||||| ||||| | |||||| |||||| ||||||||||||||||| | ||||| | |||||||||| ||||||||||||| ||||||||| ||||| |
|
|
| T |
28350138 |
aatgagcgaaataacatagttttcaaggctgaggaaaacacaattcactagatgttaaaataaagtcaagttacattcattttgatggttgaaaacttat |
28350237 |
T |
 |
| Q |
116 |
aatgtcaatattgatttaaactctc--atgtgatggtcgagcccttttgtttgt |
167 |
Q |
| |
|
||||||||| ||| ||||||||||| || || ||||||||||||||| ||||| |
|
|
| T |
28350238 |
aatgtcaattttggtttaaactctcatatatggtggtcgagcccttttatttgt |
28350291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 72; Significance: 8e-33; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 68 - 260
Target Start/End: Original strand, 26351735 - 26351929
Alignment:
| Q |
68 |
atgttcgataaagtcaaggtacattcattttggtggttgaaagcttataatgtcaatattgatttaaactctca--tgtgatggtcgagcccttttgttt |
165 |
Q |
| |
|
||||| ||||||||||| ||||||| ||||||||||||||| |||||||||||||| || |||||||||| | |||||||||||||| |||||||| |
|
|
| T |
26351735 |
atgttagataaagtcaaattacattcgttttggtggttgaaatcttataatgtcaatctttgtttaaactcttatgtgtgatggtcgagctattttgttt |
26351834 |
T |
 |
| Q |
166 |
gtatgagcaacgattaagttttcttgtttccctgctttttggtttcgttctgaccgtaaattttagaggttctttatgatacactttgtgttagt |
260 |
Q |
| |
|
||||||||| | | || ||| |||||| || | ||||||||||||| || |||||||||||| | |||||||| ||||||| |||||||||| |
|
|
| T |
26351835 |
gtatgagcatcaactacgttgtcttgtatcttttgtttttggtttcgtgctaaccgtaaatttttggggttctttctgatacatcttgtgttagt |
26351929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 166
Target Start/End: Complemental strand, 10441899 - 10441755
Alignment:
| Q |
24 |
ggaataataaagtttttaaggctaaggaaaacacaattcaccatatgttcgataaagtcaaggtacattcattttggtggttgaaagcttataatgtcaa |
123 |
Q |
| |
|
|||| |||| |||||| ||||||||||||| ||||||||||||||| | ||||||||||| ||||||| |||| || ||||||||||| |||||| || |
|
|
| T |
10441899 |
ggaacaatagagttttcaaggctaaggaaactacaattcaccatatgctagataaagtcaaattacattcgttttagttgttgaaagcttgtaatgttaa |
10441800 |
T |
 |
| Q |
124 |
tattgatttaaactctc--atgtgatggtcgagcccttttgtttg |
166 |
Q |
| |
|
| ||| ||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
10441799 |
tcttggtttaaactctcatatgtgatggtcaagcccttttgtttg |
10441755 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 9282410 - 9282305
Alignment:
| Q |
74 |
gataaagtcaaggtacattcattttggtggttgaaagcttata---atgtcaatattgatttaaactctc--atgtgatggtcgagcccttttgtttgta |
168 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||||||||| |||||||| ||| ||||||||||| ||||| |||||||||| ||| ||||||| |
|
|
| T |
9282410 |
gataaagtcaaattacattcgttttggtggttgaaagcttataatcatgtcaatcttggtttaaactctcgtatgtggtggtcgagccatttagtttgta |
9282311 |
T |
 |
| Q |
169 |
tgagca |
174 |
Q |
| |
|
|||||| |
|
|
| T |
9282310 |
tgagca |
9282305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 170
Target Start/End: Original strand, 26081465 - 26081581
Alignment:
| Q |
56 |
acaattcaccatatgttcgataaagtcaaggtacattcattttggtggttgaaagcttataatgtcaatattgatttaaactctc--atgtgatggtcga |
153 |
Q |
| |
|
|||||||| ||| || | || ||||||||| ||||||| ||||||||| ||||||||||||||||| || ||| | |||||||| || || || || | |
|
|
| T |
26081465 |
acaattcatcatttgctagaaaaagtcaagttacattctttttggtggctgaaagcttataatgtctatcttggtgcaaactctcatatatgttgctcaa |
26081564 |
T |
 |
| Q |
154 |
gcccttttgtttgtatg |
170 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
26081565 |
gcccttttgtttgtatg |
26081581 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 170
Target Start/End: Original strand, 26105252 - 26105368
Alignment:
| Q |
56 |
acaattcaccatatgttcgataaagtcaaggtacattcattttggtggttgaaagcttataatgtcaatattgatttaaactctc--atgtgatggtcga |
153 |
Q |
| |
|
|||||||| ||| || | || ||||||||| ||||||| ||||||||| ||||||||||||||||| || ||| | |||||||| || || || || | |
|
|
| T |
26105252 |
acaattcatcatttgctagaaaaagtcaagttacattctttttggtggctgaaagcttataatgtctatcttggtgcaaactctcatatatgttgctcaa |
26105351 |
T |
 |
| Q |
154 |
gcccttttgtttgtatg |
170 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
26105352 |
gcccttttgtttgtatg |
26105368 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0515 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0515
Description:
Target: scaffold0515; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 1906 - 1821
Alignment:
| Q |
24 |
ggaataataaagtttttaaggctaaggaaaacacaattcaccatatgttcgataaagtcaaggtacattcattttggtggttgaaa |
109 |
Q |
| |
|
|||| |||| |||||| |||| |||||||| |||||||||||||| | | ||||||||| ||||||||||||| ||||||||| |
|
|
| T |
1906 |
ggaacaatagagttttcaagggtaaggaaacttcaattcaccatatgctaggtaaagtcaaattacattcattttgatggttgaaa |
1821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0317 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0317
Description:
Target: scaffold0317; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 17802 - 17887
Alignment:
| Q |
24 |
ggaataataaagtttttaaggctaaggaaaacacaattcaccatatgttcgataaagtcaaggtacattcattttggtggttgaaa |
109 |
Q |
| |
|
|||| |||| |||||| |||| |||||||| |||||||||||||| | | ||||||||| ||||||||||||| ||||||||| |
|
|
| T |
17802 |
ggaacaatagagttttcaaggataaggaaacttcaattcaccatatgctaggtaaagtcaaattacattcattttgatggttgaaa |
17887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0306 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0306
Description:
Target: scaffold0306; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 1906 - 1821
Alignment:
| Q |
24 |
ggaataataaagtttttaaggctaaggaaaacacaattcaccatatgttcgataaagtcaaggtacattcattttggtggttgaaa |
109 |
Q |
| |
|
|||| |||| |||||| |||| |||||||| |||||||||||||| | | ||||||||| ||||||||||||| ||||||||| |
|
|
| T |
1906 |
ggaacaatagagttttcaagggtaaggaaacttcaattcaccatatgctaggtaaagtcaaattacattcattttgatggttgaaa |
1821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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