View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21042_low_42 (Length: 254)

Name: NF21042_low_42
Description: NF21042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21042_low_42
NF21042_low_42
[»] chr4 (37 HSPs)
chr4 (122-244)||(7908640-7908762)
chr4 (1-244)||(7773426-7773663)
chr4 (79-244)||(7790381-7790540)
chr4 (79-244)||(7771696-7771855)
chr4 (130-244)||(7878729-7878843)
chr4 (1-121)||(7877969-7878089)
chr4 (1-80)||(7908560-7908639)
chr4 (2-206)||(7765866-7766064)
chr4 (2-206)||(7786688-7786886)
chr4 (82-244)||(7237344-7237500)
chr4 (145-215)||(7813838-7813908)
chr4 (77-189)||(45384548-45384660)
chr4 (145-215)||(7800998-7801068)
chr4 (77-189)||(45365876-45365982)
chr4 (138-200)||(50666669-50666731)
chr4 (77-221)||(48870859-48870997)
chr4 (77-221)||(48876163-48876301)
chr4 (77-221)||(48886545-48886683)
chr4 (145-200)||(48147358-48147413)
chr4 (145-200)||(48156074-48156129)
chr4 (136-206)||(45371713-45371783)
chr4 (138-236)||(48853035-48853133)
chr4 (145-223)||(49043790-49043868)
chr4 (145-206)||(48864396-48864457)
chr4 (147-215)||(7823332-7823400)
chr4 (145-205)||(49038518-49038578)
chr4 (145-223)||(48863626-48863704)
chr4 (145-195)||(48903316-48903366)
chr4 (77-200)||(37826635-37826752)
chr4 (144-216)||(47208237-47208309)
chr4 (77-109)||(50669384-50669416)
chr4 (138-189)||(48861642-48861693)
chr4 (145-223)||(49040774-49040852)
chr4 (80-113)||(48156155-48156188)
chr4 (138-175)||(48899094-48899131)
chr4 (158-198)||(48735058-48735098)
chr4 (145-181)||(49048219-49048255)
[»] chr5 (4 HSPs)
chr5 (82-200)||(9120067-9120179)
chr5 (84-188)||(179364-179462)
chr5 (145-206)||(42561972-42562033)
chr5 (131-236)||(29688476-29688581)
[»] chr1 (6 HSPs)
chr1 (137-205)||(24367518-24367586)
chr1 (145-205)||(24416139-24416199)
chr1 (145-200)||(24310577-24310632)
chr1 (153-206)||(24323139-24323192)
chr1 (153-206)||(24340780-24340833)
chr1 (153-206)||(24353145-24353198)
[»] chr3 (5 HSPs)
chr3 (145-200)||(11015136-11015191)
chr3 (145-200)||(11024148-11024203)
chr3 (77-223)||(47451522-47451662)
chr3 (145-189)||(11005584-11005628)
chr3 (80-119)||(11024217-11024256)
[»] chr8 (11 HSPs)
chr8 (72-200)||(12195618-12195740)
chr8 (72-200)||(12440046-12440168)
chr8 (77-113)||(4962245-4962281)
chr8 (77-131)||(12200641-12200695)
chr8 (77-131)||(12445069-12445123)
chr8 (145-189)||(4031582-4031626)
chr8 (145-181)||(4962183-4962219)
chr8 (145-189)||(15349244-15349288)
chr8 (2-44)||(12195551-12195593)
chr8 (2-44)||(12439979-12440021)
chr8 (2-58)||(4962301-4962357)
[»] chr6 (3 HSPs)
chr6 (148-193)||(21979280-21979325)
chr6 (145-200)||(21016182-21016237)
chr6 (151-189)||(14197339-14197377)
[»] chr7 (2 HSPs)
chr7 (145-206)||(48884185-48884246)
chr7 (150-189)||(30130918-30130957)


Alignment Details
Target: chr4 (Bit Score: 111; Significance: 4e-56; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 122 - 244
Target Start/End: Original strand, 7908640 - 7908762
Alignment:
Q  122 ctatgataatgataaagatacacttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctttttctttttgttgatgccatt 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  7908640 ctatgataatgataaagatacacttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactcttgttctttctgttgatgccatt 7908739  T
Q  222 cctaatcactactttcaccctat 244  Q
    ||| |||||||||||||||||||    
T  7908740 cctgatcactactttcaccctat 7908762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 7773663 - 7773426
Alignment:
Q  1 cctttgatttaatggaaaggaagttgtttgagatacctattccaagtgattttgtctacagagcattaggacattctggtttgtgggtatttggagaatt 100  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||| | || ||  | | || ||||| | |||||||||||||||||||||||||||||     
T  7773663 cctttgatttaatggaaaggaaattgtttgagatgcctcttccaaataatgttcaccatagtgcattggtacattctggtttgtgggtatttggagaata 7773564  T
Q  101 tctcagtctatggtctatgaactatgataatgataaagatacacttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctt 200  Q
    ||| ||| ||||| ||| |      ||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||    
T  7773563 tcttagtgtatgggctaag------gataatgctaatgatacagttgaaatatgggtgatgaaagaatacaaagtgcattcgtcttggattaaatctctt 7773470  T
Q  201 tttctttttgttgatgccattcctaatcactactttcaccctat 244  Q
     |||||| |||||| ||||||||| ||||||||||||| |||||    
T  7773469 gttctttctgttgaagccattcctgatcactactttcaacctat 7773426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 79 - 244
Target Start/End: Original strand, 7790381 - 7790540
Alignment:
Q  79 gtttgtgggtatttggagaatttctcagtctatggtctatgaactatgataatgataaagatacacttgaaatatgggtgatgaaagaatacaaagtgca 178  Q
    ||||||||||||||||||||||||||||| ||||  ||| | | |||||||||||||      || ||||||||||||||||||||||||||||||||||    
T  7790381 gtttgtgggtatttggagaatttctcagtttatgcgctaaggattatgataatgata------caattgaaatatgggtgatgaaagaatacaaagtgca 7790474  T
Q  179 ttcatcttggaataaaactctttttctttttgttgatgccattcctaatcactactttcaccctat 244  Q
    ||| ||||||| |||||||||| |||||| | |||||||||||||| ||||||||||||| |||||    
T  7790475 ttcgtcttggactaaaactcttgttctttctattgatgccattcctgatcactactttcaacctat 7790540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 79 - 244
Target Start/End: Original strand, 7771696 - 7771855
Alignment:
Q  79 gtttgtgggtatttggagaatttctcagtctatggtctatgaactatgataatgataaagatacacttgaaatatgggtgatgaaagaatacaaagtgca 178  Q
    ||||||||||||||||||||||||||||| ||||  ||| | | |||||||||||||      || ||| ||||||||||||||||||||||||||||||    
T  7771696 gtttgtgggtatttggagaatttctcagtttatgcgctaaggattatgataatgata------caattgtaatatgggtgatgaaagaatacaaagtgca 7771789  T
Q  179 ttcatcttggaataaaactctttttctttttgttgatgccattcctaatcactactttcaccctat 244  Q
    ||| || |||| |||||||||| |||||| |||||||||||||||| ||||||||||||| |||||    
T  7771790 ttcgtcatggactaaaactcttgttctttctgttgatgccattcctgatcactactttcaacctat 7771855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 130 - 244
Target Start/End: Original strand, 7878729 - 7878843
Alignment:
Q  130 atgataaagatacacttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctttttctttttgttgatgccattcctaatca 229  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||  ||||||| ||||||| ||||    
T  7878729 atgataatgatacagttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggattaaaactcttgttctttcggttgatgtcattcctgatca 7878828  T
Q  230 ctactttcaccctat 244  Q
    ||||||||| |||||    
T  7878829 ctactttcaacctat 7878843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 7877969 - 7878089
Alignment:
Q  1 cctttgatttaatggaaaggaagttgtttgagatacctattccaagtgattttgtctacagagcattaggacattctggtttgtgggtatttggagaatt 100  Q
    |||||||||||||||||| ||| ||||||||||| ||| |||||| | || ||| | | |||||||||| ||||||||||||||||||||||||||||||    
T  7877969 cctttgatttaatggaaaagaaattgtttgagatgcctcttccaaataatgttgaccatagagcattagtacattctggtttgtgggtatttggagaatt 7878068  T
Q  101 tctcagtctatggtctatgaa 121  Q
    ||||||||||||| |||||||    
T  7878069 tctcagtctatgggctatgaa 7878089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 7908560 - 7908639
Alignment:
Q  1 cctttgatttaatggaaaggaagttgtttgagatacctattccaagtgattttgtctacagagcattaggacattctggt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  7908560 cctttgatttaatggaaaggaagttgtttgagatacctattccaagtgattttgtccacagagcatcaggacattctggt 7908639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 206
Target Start/End: Original strand, 7765866 - 7766064
Alignment:
Q  2 ctttgatttaatggaaaggaagttgtttgagatacctattccaagtgattttgtctacagagcattaggacattctggtttgtgggtatttggagaattt 101  Q
    ||||||||||| ||||||||  ||||||||||| ||| |||||| |||| ||| | ||| |||||| | |||||||||||||||||||| ||||||||||    
T  7765866 ctttgatttaacggaaaggatattgtttgagatgcctcttccaaatgatgttgaccacacagcattggtacattctggtttgtgggtatctggagaattt 7765965  T
Q  102 ctcagtctatggtctatgaactatgataatgataaagatacacttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactcttt 201  Q
    |||||| |||||  ||      | |||| |  ||| |||||| |||||||||||||||||||||||||||||||| |||| || |||| ||| || |||     
T  7765966 ctcagtatatgggtta------aggatactactaatgatacaattgaaatatgggtgatgaaagaatacaaagtgtattcgtcatggactaagacacttg 7766059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 206
Target Start/End: Original strand, 7786688 - 7786886
Alignment:
Q  2 ctttgatttaatggaaaggaagttgtttgagatacctattccaagtgattttgtctacagagcattaggacattctggtttgtgggtatttggagaattt 101  Q
    ||||||||||| ||||||||  ||||||||||| ||| |||||| |||| ||| | ||| ||  || | |||||||||||||||||||| ||| ||||||    
T  7786688 ctttgatttaacggaaaggatattgtttgagatgcctcttccaaatgatgttgaccacacagagttggtacattctggtttgtgggtatctggggaattt 7786787  T
Q  102 ctcagtctatggtctatgaactatgataatgataaagatacacttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactcttt 201  Q
    |||||| |||||  || |      |||| |  ||| |||||| |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||     
T  7786788 ctcagtatatgggttaag------gatactactaatgatacaattgaaatatgggtgatgaaagaatacaacgtgcatttatcttggaataagactcttg 7786881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 82 - 244
Target Start/End: Complemental strand, 7237500 - 7237344
Alignment:
Q  82 tgtgggtatttggagaatttctcagtctatggtctatgaactatgataatgataaagatacacttgaaatatgggtgatgaaagaatacaaagtgcattc 181  Q
    |||||||||||||||||||||||||||||||| ||  | | |||||||||||||      || ||| ||||||||||||||||||||||||| |||||||    
T  7237500 tgtgggtatttggagaatttctcagtctatgggctcaggattatgataatgata------caattgtaatatgggtgatgaaagaatacaaaatgcattc 7237407  T
Q  182 atcttggaataaaactctttttctttttgttgatgccattcctaatcactactttcaccctat 244  Q
     | ||||| |||||||||| | |||  | || ||  |||||||  ||||||||||||||||||    
T  7237406 gttttggactaaaactcttgtgcttcctcttcatcgcattcctggtcactactttcaccctat 7237344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 7813838 - 7813908
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctttttctttttgttgat 215  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||| |||||||    
T  7813838 ttgaaatatgggtgttgaaagaatacaaagtgcattcgtcttggaataaaactcttgttctttctgttgat 7813908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 189
Target Start/End: Complemental strand, 45384660 - 45384548
Alignment:
Q  77 tggtttgtgggtatttggagaatttctcagtctatggtctatgaactatgataatgataaagatacacttgaaatatgggtgatgaaagaatacaaagtg 176  Q
    ||||||||||||||||||||||||||||||| | ||  ||||| | |||||||||  |||   | || ||||||||||||||||||||||||| ||||||    
T  45384660 tggtttgtgggtatttggagaatttctcagtttttgagctatgcattatgataatattaatatttcagttgaaatatgggtgatgaaagaatataaagtg 45384561  T
Q  177 cattcatcttgga 189  Q
    ||||| |||||||    
T  45384560 cattcgtcttgga 45384548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 7800998 - 7801068
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctttttctttttgttgat 215  Q
    |||||||||||||| ||||||| |||||||||||||| |||||||||||||||||| |||||| |||||||    
T  7800998 ttgaaatatgggtgttgaaagattacaaagtgcattcgtcttggaataaaactcttgttctttctgttgat 7801068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 189
Target Start/End: Complemental strand, 45365982 - 45365876
Alignment:
Q  77 tggtttgtgggtatttggagaatttctcagtctatggtctatgaactatgataatgataaagatacacttgaaatatgggtgatgaaagaatacaaagtg 176  Q
    ||||||||||||||||||||||||| ||||| | ||| ||||| | ||||||||||||| ||      ||||||||||||||||||||||||| ||||||    
T  45365982 tggtttgtgggtatttggagaatttttcagtttttgggctatggattatgataatgatacag------ttgaaatatgggtgatgaaagaatataaagtg 45365889  T
Q  177 cattcatcttgga 189  Q
    | ||| |||||||    
T  45365888 cgttcgtcttgga 45365876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 50666669 - 50666731
Alignment:
Q  138 gatacacttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctt 200  Q
    |||||| ||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  50666669 gatacaattgaattatgggtgatgtaagaatacaaagtgcattcatcttggactaaaactctt 50666731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 221
Target Start/End: Original strand, 48870859 - 48870997
Alignment:
Q  77 tggtttgtgggtatttggagaatttctcagtctatggtctatgaactatgataatgataaagatacacttgaaatatgggtgatgaaagaatacaaagtg 176  Q
    |||||||||||||||||| ||||||||||||||||   ||||| | |||   ||||||||   |||| ||||||| ||||||||||| ||||||||||||    
T  48870859 tggtttgtgggtatttggggaatttctcagtctatatgctatggattat---aatgataa---tacaattgaaatgtgggtgatgaatgaatacaaagtg 48870952  T
Q  177 cattcatcttggaataaaactctttttctttttgttgatgccatt 221  Q
     | || |||||||  || |||||| |||||| |||||||| ||||    
T  48870953 aactcgtcttggacaaagactcttgttctttctgttgatgacatt 48870997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 221
Target Start/End: Original strand, 48876163 - 48876301
Alignment:
Q  77 tggtttgtgggtatttggagaatttctcagtctatggtctatgaactatgataatgataaagatacacttgaaatatgggtgatgaaagaatacaaagtg 176  Q
    |||||||||||||||||| ||||||||||||||||   ||||| | |||   ||||||||   |||| ||||||| ||||||||||| ||||||||||||    
T  48876163 tggtttgtgggtatttggggaatttctcagtctatatgctatggattat---aatgataa---tacaattgaaatgtgggtgatgaatgaatacaaagtg 48876256  T
Q  177 cattcatcttggaataaaactctttttctttttgttgatgccatt 221  Q
     | || |||||||  || |||||| |||||| |||||||| ||||    
T  48876257 aactcgtcttggacaaagactcttgttctttctgttgatgacatt 48876301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 221
Target Start/End: Original strand, 48886545 - 48886683
Alignment:
Q  77 tggtttgtgggtatttggagaatttctcagtctatggtctatgaactatgataatgataaagatacacttgaaatatgggtgatgaaagaatacaaagtg 176  Q
    |||||||||||||||||| ||||||||||||||||   ||||| | |||   ||||||||   |||| ||||||| ||||||||||| ||||||||||||    
T  48886545 tggtttgtgggtatttggggaatttctcagtctatatgctatggattat---aatgataa---tacaattgaaatgtgggtgatgaatgaatacaaagtg 48886638  T
Q  177 cattcatcttggaataaaactctttttctttttgttgatgccatt 221  Q
     | || |||||||  || |||||| |||||| |||||||| ||||    
T  48886639 aactcgtcttggacaaagactcttgttctttctgttgatgacatt 48886683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 48147413 - 48147358
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctt 200  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  48147413 ttgaaatatgggtgatgaaagaatacaaagtgcattcgtcttggactaagactctt 48147358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 48156129 - 48156074
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctt 200  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||    
T  48156129 ttgaaatatgggtgatgaacgaatacaaagtgcattcttcttggactaaaactctt 48156074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 45371783 - 45371713
Alignment:
Q  136 aagatacacttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctttttctt 206  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||| ||||||| ||| ||| || |||||    
T  45371783 aagatacagttgaaatatgggttatgaaagaatacaaagtgcattcgtcttggactaagacttttgttctt 45371713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 236
Target Start/End: Original strand, 48853035 - 48853133
Alignment:
Q  138 gatacacttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctttttctttttgttgatgccattcctaatcactacttt 236  Q
    |||||| ||||||||||||| ||||||||||||||||||| ||| ||||||| ||| |||||| |||||| | ||  | ||||||| | ||||||||||    
T  48853035 gatacagttgaaatatgggtcatgaaagaatacaaagtgcgttcgtcttggactaagactcttgttctttcttttagttccattcccactcactacttt 48853133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 223
Target Start/End: Complemental strand, 49043868 - 49043790
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctttttctttttgttgatgccattcc 223  Q
    ||||||||||||||||||||||||||||||||||||| || |||| ||| |||||| || ||| | |||||| ||||||    
T  49043868 ttgaaatatgggtgatgaaagaatacaaagtgcattcgtcatggactaagactcttgttttttctattgatgtcattcc 49043790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 48864396 - 48864457
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctttttctt 206  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||| | |||| |||||    
T  48864396 ttgaaatatgggtgatgaaagaatacaaagtgcattcgtcttggactaagattcttgttctt 48864457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 7823332 - 7823400
Alignment:
Q  147 gaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctttttctttttgttgat 215  Q
    |||||||||||| | ||||| |||||||||||||  |||||||||||||||||| |||||| |||||||    
T  7823332 gaaatatgggtgtttaaagattacaaagtgcatttgtcttggaataaaactcttgttctttctgttgat 7823400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 49038578 - 49038518
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctttttct 205  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||| ||| |||||| ||||    
T  49038578 ttgaaatatgggtgatgaaagaatacaaagttcattcgtcttggactaagactcttgttct 49038518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 48863626 - 48863704
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctttttctttttgttgatgccattcc 223  Q
    |||| |||||||||||| ||||||||  ||||||||||||||||| |||||||||| | |||| | |||||||| ||||    
T  48863626 ttgacatatgggtgatggaagaatacggagtgcattcatcttggattaaaactcttgtgctttctattgatgcctttcc 48863704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 48903316 - 48903366
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaa 195  Q
    ||||||||||||||||||||||||||||||||||||  ||||||| |||||    
T  48903316 ttgaaatatgggtgatgaaagaatacaaagtgcatttgtcttggactaaaa 48903366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 200
Target Start/End: Complemental strand, 37826752 - 37826635
Alignment:
Q  77 tggtttgtgggtatttggagaatttctcagtctatggtctatgaactatgataatgataaagatacacttgaaatatgggtgatgaaagaatacaaagtg 176  Q
    ||||||||||||||||||||||||||| ||||||||| | |||  |  | ||||| |||      ||||| || || |||||||||||||||||||| ||    
T  37826752 tggtttgtgggtatttggagaatttcttagtctatgggccatgggcagttataatcata------cacttaaattacgggtgatgaaagaatacaaactg 37826659  T
Q  177 cattcatcttggaataaaactctt 200  Q
    ||||| ||||||| ||| ||||||    
T  37826658 cattcgtcttggactaagactctt 37826635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 47208237 - 47208309
Alignment:
Q  144 cttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctttttctttttgttgatg 216  Q
    ||||||||| |||||||||||||||||||||| || |||||||||| ||||  |||| |||||| | ||||||    
T  47208237 cttgaaataagggtgatgaaagaatacaaagtacaatcatcttggactaaagttcttattctttctcttgatg 47208309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 50669384 - 50669416
Alignment:
Q  77 tggtttgtgggtatttggagaatttctcagtct 109  Q
    |||||||||||||||||||||||||||||||||    
T  50669384 tggtttgtgggtatttggagaatttctcagtct 50669416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 48861642 - 48861693
Alignment:
Q  138 gatacacttgaaatatgggtgatgaaagaatacaaagtgcattcatcttgga 189  Q
    |||||| ||||||||||||| || |||||||||||||||||||  |||||||    
T  48861642 gatacatttgaaatatgggtaataaaagaatacaaagtgcatttgtcttgga 48861693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 223
Target Start/End: Complemental strand, 49040852 - 49040774
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctttttctttttgttgatgccattcc 223  Q
    |||| |||||||||||| |||||||   ||||||||||||||||| ||||| |||| | |||  | |||||||||||||    
T  49040852 ttgatatatgggtgatggaagaatatggagtgcattcatcttggattaaaattcttgtgcttcctattgatgccattcc 49040774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 48156188 - 48156155
Alignment:
Q  80 tttgtgggtatttggagaatttctcagtctatgg 113  Q
    |||||||||||||||||||||||||||| |||||    
T  48156188 tttgtgggtatttggagaatttctcagtttatgg 48156155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 48899094 - 48899131
Alignment:
Q  138 gatacacttgaaatatgggtgatgaaagaatacaaagt 175  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  48899094 gatacagttgaaatatgggtgatgaaagaatataaagt 48899131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 48735098 - 48735058
Alignment:
Q  158 gatgaaagaatacaaagtgcattcatcttggaataaaactc 198  Q
    ||||||||||||||||||| |||| ||||||| ||||||||    
T  48735098 gatgaaagaatacaaagtgaattcgtcttggactaaaactc 48735058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 49048255 - 49048219
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattc 181  Q
    |||||||||||||||||||||| || |||||||||||    
T  49048255 ttgaaatatgggtgatgaaagagtataaagtgcattc 49048219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 82 - 200
Target Start/End: Original strand, 9120067 - 9120179
Alignment:
Q  82 tgtgggtatttggagaatttctcagtctatggtctatgaactatgataatgataaagatacacttgaaatatgggtgatgaaagaatacaaagtgcattc 181  Q
    |||||||||||||||||||||||||| ||||| ||||| | | || |||||||| ||      |||||||||||||||||||||||||||||||||||||    
T  9120067 tgtgggtatttggagaatttctcagtatatgggctatggattttgctaatgatacag------ttgaaatatgggtgatgaaagaatacaaagtgcattc 9120160  T
Q  182 atcttggaataaaactctt 200  Q
     |||||||| |||||||||    
T  9120161 ctcttggaagaaaactctt 9120179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 179364 - 179462
Alignment:
Q  84 tgggtatttggagaatttctcagtctatggtctatgaactatgataatgataaagatacacttgaaatatgggtgatgaaagaatacaaagtgcattcat 183  Q
    |||||||||||| ||||||||||| ||||| ||||| | ||||||||||||| ||      |||||||||||||||||||||||||||||||||||||||    
T  179364 tgggtatttggacaatttctcagtatatgggctatggattatgataatgatacag------ttgaaatatgggtgatgaaagaatacaaagtgcattcat 179457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 42562033 - 42561972
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctttttctt 206  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||| | |||| |||||    
T  42562033 ttgatatatgggtgatgaaagaatacaaagtgcattcatcttggactaagattcttgttctt 42561972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 29688476 - 29688581
Alignment:
Q  131 tgataaagatacacttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctttttctttttgttgatgccattcctaatcac 230  Q
    |||||| | |||| |||||||||||||||||||| ||||||| ||||| || |||||||  || |||||  |||||| | ||| || |||||| | ||||    
T  29688476 tgataatggtacagttgaaatatgggtgatgaaaaaatacaatgtgcaatcgtcttggacaaagactctcgttctttcttttggtgacattcccattcac 29688575  T
Q  231 tacttt 236  Q
    ||||||    
T  29688576 tacttt 29688581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 24367518 - 24367586
Alignment:
Q  137 agatacacttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctttttct 205  Q
    |||||||||| | |||||||| ||| ||||||||||||||||||| ||||||| |||||||||| ||||    
T  24367518 agatacactttatatatgggtaatggaagaatacaaagtgcattcgtcttggactaaaactcttgttct 24367586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 24416139 - 24416199
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctttttct 205  Q
    |||| ||||||||||||||||||||||||| ||| |||||||||| |||||||||| ||||    
T  24416139 ttgatatatgggtgatgaaagaatacaaagggcagtcatcttggactaaaactcttgttct 24416199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 24310577 - 24310632
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctt 200  Q
    |||| ||||||||||||||||||||||||||||| || ||||||| ||||||||||    
T  24310577 ttgatatatgggtgatgaaagaatacaaagtgcagtcttcttggagtaaaactctt 24310632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 24323139 - 24323192
Alignment:
Q  153 tgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctttttctt 206  Q
    |||||||||||||||||||||||||| ||||||| || |||||||||| |||||    
T  24323139 tgggtgatgaaagaatacaaagtgcagtcatcttcgactaaaactcttgttctt 24323192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 24340780 - 24340833
Alignment:
Q  153 tgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctttttctt 206  Q
    ||||| ||||||||||| |||||||| |||||||||| |||||||||| |||||    
T  24340780 tgggtaatgaaagaatataaagtgcagtcatcttggactaaaactcttgttctt 24340833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 24353145 - 24353198
Alignment:
Q  153 tgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctttttctt 206  Q
    ||||| ||||||||||| |||||||| |||||||||| |||||||||| |||||    
T  24353145 tgggtaatgaaagaatataaagtgcagtcatcttggactaaaactcttgttctt 24353198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 11015191 - 11015136
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctt 200  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||  ||||||||||    
T  11015191 ttgaaatatgggttatgaaagaatacaaagtgcattcgtcttgggttaaaactctt 11015136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 11024203 - 11024148
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctt 200  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| ||| ||||||    
T  11024203 ttgaaatatgggttatgaaagaatacaaagtgcattcgtcttggactaagactctt 11024148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 223
Target Start/End: Complemental strand, 47451662 - 47451522
Alignment:
Q  77 tggtttgtgggtatttggagaatttctcagtctatggtctatgaactatgataatgataaagatacacttgaaatatgggtgatgaaagaatacaaagtg 176  Q
    ||||||||||||||||||||||||||| |||||| ||  | || | | | ||||||||| ||      |||||||||||||||||||||||||||||||     
T  47451662 tggtttgtgggtatttggagaatttcttagtctaagggttctggattgtcataatgatatag------ttgaaatatgggtgatgaaagaatacaaagtt 47451569  T
Q  177 cattcatcttggaataaaactctttttctttttgttgatgccattcc 223  Q
     |||| |||||| | || |||||| |||||  | |||||| ||||||    
T  47451568 aattcgtcttgggaaaagactcttgttcttcctattgatggcattcc 47451522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 11005628 - 11005584
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttgga 189  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||    
T  11005628 ttgaaatatgggttatgaaagaatacaaagtgcattcgtcttgga 11005584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 119
Target Start/End: Complemental strand, 11024256 - 11024217
Alignment:
Q  80 tttgtgggtatttggagaatttctcagtctatggtctatg 119  Q
    ||||||| |||||||||||||||||||||||||| |||||    
T  11024256 tttgtggatatttggagaatttctcagtctatgggctatg 11024217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 200
Target Start/End: Original strand, 12195618 - 12195740
Alignment:
Q  72 cattctggtttgtgggtatttggagaatttctcagtctatggtctatgaactatgataatgataaagatacacttgaaatatgggtgatgaaagaataca 171  Q
    |||| ||||||||||||||||||| |||||||||||||||||  |||||| | |||||||         ||| |||||||||||| ||||||||||||||    
T  12195618 cattatggtttgtgggtatttggaaaatttctcagtctatggaatatgaattttgataat------cggacagttgaaatatgggagatgaaagaataca 12195711  T
Q  172 aagtgcattcatcttggaataaaactctt 200  Q
    ||   || |||||||||| ||| ||||||    
T  12195712 aacaacaatcatcttggactaagactctt 12195740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 200
Target Start/End: Original strand, 12440046 - 12440168
Alignment:
Q  72 cattctggtttgtgggtatttggagaatttctcagtctatggtctatgaactatgataatgataaagatacacttgaaatatgggtgatgaaagaataca 171  Q
    |||| ||||||||||||||||||| |||||||||||||||||  |||||| | |||||||         ||| |||||||||||| ||||||||||||||    
T  12440046 cattatggtttgtgggtatttggaaaatttctcagtctatggaatatgaattttgataat------cggacagttgaaatatgggagatgaaagaataca 12440139  T
Q  172 aagtgcattcatcttggaataaaactctt 200  Q
    ||   || |||||||||| ||| ||||||    
T  12440140 aacaacaatcatcttggactaagactctt 12440168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 4962281 - 4962245
Alignment:
Q  77 tggtttgtgggtatttggagaatttctcagtctatgg 113  Q
    |||||||||||||||||||||||||||||||||||||    
T  4962281 tggtttgtgggtatttggagaatttctcagtctatgg 4962245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 12200641 - 12200695
Alignment:
Q  77 tggtttgtgggtatttggagaatttctcagtctatggtctatgaactatgataat 131  Q
    ||||||||||||||||||||||||||| |||||||||  |||||| | |||||||    
T  12200641 tggtttgtgggtatttggagaatttcttagtctatggaatatgaattttgataat 12200695  T

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Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 12445069 - 12445123
Alignment:
Q  77 tggtttgtgggtatttggagaatttctcagtctatggtctatgaactatgataat 131  Q
    ||||||||||||||||||||||||||| |||||||||  |||||| | |||||||    
T  12445069 tggtttgtgggtatttggagaatttcttagtctatggaatatgaattttgataat 12445123  T

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Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 4031626 - 4031582
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttgga 189  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||    
T  4031626 ttgaaatatgggttatgaaagaatacaaaatgcattcgtcttgga 4031582  T

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Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 4962219 - 4962183
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattc 181  Q
    ||||||||||||||||||||||||||||| |||||||    
T  4962219 ttgaaatatgggtgatgaaagaatacaaactgcattc 4962183  T

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Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 189
Target Start/End: Original strand, 15349244 - 15349288
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttgga 189  Q
    |||||||||||||||||||||||||||||||| | || |||||||    
T  15349244 ttgaaatatgggtgatgaaagaatacaaagtgaactcttcttgga 15349288  T

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Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 12195551 - 12195593
Alignment:
Q  2 ctttgatttaatggaaaggaagttgtttgagatacctattcca 44  Q
    ||||||||||||||||||||| ||||| ||||||||| |||||    
T  12195551 ctttgatttaatggaaaggaaattgttagagatacctcttcca 12195593  T

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Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 12439979 - 12440021
Alignment:
Q  2 ctttgatttaatggaaaggaagttgtttgagatacctattcca 44  Q
    ||||||||||||||||||||| ||||| ||||||||| |||||    
T  12439979 ctttgatttaatggaaaggaaattgttagagatacctcttcca 12440021  T

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Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 4962357 - 4962301
Alignment:
Q  2 ctttgatttaatggaaaggaagttgtttgagatacctattccaagtgattttgtcta 58  Q
    ||||||||||||||||||||| ||||| ||||| ||| |||| | |||||||| |||    
T  4962357 ctttgatttaatggaaaggaaattgttagagatgcctcttcccaatgattttgacta 4962301  T

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Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 193
Target Start/End: Complemental strand, 21979325 - 21979280
Alignment:
Q  148 aaatatgggtgatgaaagaatacaaagtgcattcatcttggaataa 193  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||    
T  21979325 aaatatgggtgatgaaagaatacaaagtgcgttcctcttggaataa 21979280  T

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Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 21016182 - 21016237
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctt 200  Q
    ||||||||||||| ||||||||||||||||| ||||| ||||||| ||| ||||||    
T  21016182 ttgaaatatgggttatgaaagaatacaaagtacattcgtcttggactaagactctt 21016237  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 14197377 - 14197339
Alignment:
Q  151 tatgggtgatgaaagaatacaaagtgcattcatcttgga 189  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  14197377 tatgggtgatgaaagaatacaaaatgcattcatcttgga 14197339  T

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Target: chr7 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 48884185 - 48884246
Alignment:
Q  145 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactctttttctt 206  Q
    ||||||||| |||||||||||||||||||||||||   ||||||| ||| |||||| |||||    
T  48884185 ttgaaatataggtgatgaaagaatacaaagtgcatatgtcttggactaagactcttgttctt 48884246  T

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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 30130957 - 30130918
Alignment:
Q  150 atatgggtgatgaaagaatacaaagtgcattcatcttgga 189  Q
    |||||||||||| ||||||||| |||||||||||||||||    
T  30130957 atatgggtgatgcaagaatacacagtgcattcatcttgga 30130918  T

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