View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21042_low_56 (Length: 206)
Name: NF21042_low_56
Description: NF21042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21042_low_56 |
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Alignment Details
Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 49485979 - 49486155
Alignment:
| Q |
16 |
agaaggaaaagaaaaatattttgcttctacaaatttgctcctatatccaatttactctatccctttccattcaatccttagtttctaaaattgtacaaga |
115 |
Q |
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| T |
49485979 |
agaagaaaaagaaaaatattttgcttctacaaatttgctcctatgtccaatttactctatccctttccattcaatcctttgtttctaaaactgtacaaga |
49486078 |
T |
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| Q |
116 |
aattcctattaaacaaataactctttcttcttcacatttagcagtaatgcagtatgcaagattatgatagccaaatg |
192 |
Q |
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| T |
49486079 |
aattcctattaaacaaataactctttcttcttcacgtttagcagtaatgcagtatgcaagattatgatagccaaatg |
49486155 |
T |
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