View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21043_low_22 (Length: 386)

Name: NF21043_low_22
Description: NF21043
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21043_low_22
NF21043_low_22
[»] chr4 (23 HSPs)
chr4 (12-370)||(11701615-11701973)
chr4 (12-215)||(11797814-11798017)
chr4 (12-212)||(11675880-11676080)
chr4 (12-212)||(11684159-11684359)
chr4 (12-204)||(11695984-11696176)
chr4 (12-184)||(11778983-11779155)
chr4 (246-295)||(29517841-29517890)
chr4 (249-293)||(39263632-39263676)
chr4 (249-300)||(572173-572224)
chr4 (237-295)||(54110490-54110549)
chr4 (249-295)||(865421-865467)
chr4 (249-295)||(866279-866325)
chr4 (249-295)||(29145244-29145290)
chr4 (249-295)||(42712141-42712187)
chr4 (261-295)||(6711121-6711155)
chr4 (249-295)||(9170695-9170741)
chr4 (249-295)||(29144856-29144902)
chr4 (249-291)||(48615231-48615273)
chr4 (249-291)||(54109504-54109546)
chr4 (249-294)||(6056415-6056460)
chr4 (249-294)||(48614230-48614275)
chr4 (249-293)||(24573734-24573778)
chr4 (259-295)||(53535606-53535642)
[»] scaffold0294 (1 HSPs)
scaffold0294 (12-217)||(16413-16618)
[»] chr8 (13 HSPs)
chr8 (249-295)||(7601716-7601762)
chr8 (249-295)||(40784812-40784858)
chr8 (249-295)||(42093432-42093478)
chr8 (249-295)||(11596580-11596626)
chr8 (249-300)||(41723214-41723265)
chr8 (249-291)||(14446061-14446103)
chr8 (249-295)||(30427086-30427132)
chr8 (250-293)||(40575870-40575913)
chr8 (249-295)||(15224757-15224803)
chr8 (259-293)||(35627058-35627092)
chr8 (249-295)||(37727107-37727153)
chr8 (261-295)||(39529570-39529604)
chr8 (249-290)||(30136730-30136771)
[»] chr5 (13 HSPs)
chr5 (249-295)||(16899915-16899961)
chr5 (249-295)||(6895207-6895253)
chr5 (249-295)||(40366265-40366311)
chr5 (249-300)||(31559038-31559089)
chr5 (249-295)||(3099096-3099142)
chr5 (249-295)||(39084321-39084367)
chr5 (249-294)||(3098310-3098355)
chr5 (249-294)||(32694780-32694825)
chr5 (249-297)||(31558244-31558292)
chr5 (249-295)||(6894356-6894402)
chr5 (249-295)||(19432550-19432596)
chr5 (233-290)||(29096816-29096874)
chr5 (249-295)||(38914283-38914329)
[»] chr3 (16 HSPs)
chr3 (249-295)||(54280858-54280904)
chr3 (249-295)||(21103611-21103657)
chr3 (249-293)||(42121747-42121791)
chr3 (249-300)||(31090679-31090730)
chr3 (236-293)||(43631220-43631278)
chr3 (249-295)||(43656221-43656267)
chr3 (249-295)||(54295103-54295149)
chr3 (236-295)||(44707557-44707616)
chr3 (249-295)||(41780402-41780448)
chr3 (249-295)||(42489287-42489333)
chr3 (249-295)||(51218110-51218156)
chr3 (244-297)||(34985099-34985152)
chr3 (249-294)||(42488457-42488502)
chr3 (259-295)||(15951522-15951558)
chr3 (249-293)||(43655345-43655389)
chr3 (249-289)||(53427978-53428018)
[»] chr1 (13 HSPs)
chr1 (249-295)||(39841274-39841320)
chr1 (249-294)||(43380545-43380590)
chr1 (249-295)||(51465757-51465803)
chr1 (249-294)||(29373965-29374010)
chr1 (249-293)||(41147287-41147331)
chr1 (249-295)||(171447-171493)
chr1 (249-295)||(1743212-1743258)
chr1 (249-295)||(16878751-16878797)
chr1 (249-295)||(46728723-46728769)
chr1 (250-295)||(39025382-39025427)
chr1 (249-293)||(1744028-1744072)
chr1 (259-295)||(23551686-23551722)
chr1 (249-293)||(30856906-30856950)
[»] chr6 (4 HSPs)
chr6 (250-295)||(3184691-3184736)
chr6 (249-295)||(544345-544391)
chr6 (249-291)||(1175114-1175156)
chr6 (261-295)||(32403993-32404027)
[»] chr2 (17 HSPs)
chr2 (249-294)||(44075841-44075886)
chr2 (249-300)||(39233933-39233984)
chr2 (249-295)||(2215046-2215092)
chr2 (249-295)||(3834932-3834978)
chr2 (249-295)||(18234196-18234242)
chr2 (246-295)||(2076415-2076464)
chr2 (249-300)||(2075679-2075730)
chr2 (249-295)||(5429804-5429850)
chr2 (246-295)||(25455792-25455841)
chr2 (249-291)||(914385-914427)
chr2 (249-295)||(5429055-5429101)
chr2 (249-295)||(8873691-8873737)
chr2 (249-295)||(16011371-16011417)
chr2 (249-295)||(28784824-28784870)
chr2 (249-291)||(35907371-35907413)
chr2 (249-297)||(28783812-28783860)
chr2 (249-293)||(39475410-39475454)
[»] chr7 (13 HSPs)
chr7 (249-295)||(37796603-37796649)
chr7 (249-295)||(41345438-41345484)
chr7 (249-295)||(14419395-14419441)
chr7 (249-295)||(21985585-21985631)
chr7 (249-291)||(26828771-26828813)
chr7 (249-295)||(47723485-47723531)
chr7 (249-289)||(26829629-26829669)
chr7 (249-295)||(6822610-6822656)
chr7 (249-294)||(46196746-46196791)
chr7 (259-295)||(7945349-7945385)
chr7 (259-295)||(11337718-11337754)
chr7 (259-295)||(21984874-21984910)
chr7 (249-293)||(40193866-40193910)


Alignment Details
Target: chr4 (Bit Score: 327; Significance: 0; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 12 - 370
Target Start/End: Complemental strand, 11701973 - 11701615
Alignment:
Q  12 aagaatcagcaacaaaagcacctaagagaggaagtagagaagctgttccagcccaaacatttacattcttagcagctgttgcagtgctctgtttgagtgg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11701973 aagaatcagcaacaaaagcacctaagagaggaagtagagaagctgttccagcccaaacatttacattcttagcagctgttgcagtgctctgtttgagtgg 11701874  T
Q  112 ccctgttagatatgatatcaaattcccttgaattccataatatgataccctctctgccacttccacacctaaacataacattcataatccatttaaattc 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11701873 ccctgttagatatgatatcaaattcccttgaattccataatatgataccctctctgccacttccacacctaaacataacattcataatccatttaaattc 11701774  T
Q  212 tcatcaccatttaaaaaagaaaatataaagaaggtttaatatgataatcgtccctgtaatttggaccagttttgattttcgtccatatagnnnnnnnnct 311  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||        ||    
T  11701773 tcatcaccatttaaaaaagaaaatataaagaaggtttaatattataatcgtccctgtaatttggaccagttttgattttcgtccatgtagaaaaaaaact 11701674  T
Q  312 ttaaaatacatcactgtaaaccagattaattgagatatgaaattgtttacctatgataa 370  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11701673 ttaaaatacatcactgtaaaccagattaattgagatatgaaattgtttacctatgataa 11701615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 11798017 - 11797814
Alignment:
Q  12 aagaatcagcaacaaaagcacctaagagaggaagtagagaagctgttccagcccaaacatttacattcttagcagctgttgcagtgctctgtttgagtgg 111  Q
    ||||||||||||  |||||||| |||||||||||||||||||| |||||| |||||||||| ||||| | ||||||| |||||||||| |||||||||||    
T  11798017 aagaatcagcaatgaaagcaccaaagagaggaagtagagaagcagttccaacccaaacattcacattttcagcagcttttgcagtgctttgtttgagtgg 11797918  T
Q  112 ccctgttagatatgatatcaaattcccttgaattccataatatgataccctctctgccacttccacacctaaacataacattcataatccatttaaattc 211  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  11797917 tcctgttagatatgatatcaaattcccttgaattccataatatgataccctctctgccacttccacacctaaacataacattcataattcatttcaattc 11797818  T
Q  212 tcat 215  Q
    ||||    
T  11797817 tcat 11797814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 12 - 212
Target Start/End: Complemental strand, 11676080 - 11675880
Alignment:
Q  12 aagaatcagcaacaaaagcacctaagagaggaagtagagaagctgttccagcccaaacatttacattcttagcagctgttgcagtgctctgtttgagtgg 111  Q
    |||||||||||||||||||||| ||||||||||| ||||||||   ||||||||||| ||| ||||||| |||||| ||||||||||| |||||||||||    
T  11676080 aagaatcagcaacaaaagcaccaaagagaggaaggagagaagcaactccagcccaaatattcacattctcagcagcagttgcagtgctttgtttgagtgg 11675981  T
Q  112 ccctgttagatatgatatcaaattcccttgaattccataatatgataccctctctgccacttccacacctaaacataacattcataatccatttaaattc 211  Q
     |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||  ||||| |||||    
T  11675980 tcctgttagatatgatatcaagttcccttgaatcccataatatgataccctctctgccacttccacacctatacaaaacattcataactcatttcaattc 11675881  T
Q  212 t 212  Q
    |    
T  11675880 t 11675880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 12 - 212
Target Start/End: Complemental strand, 11684359 - 11684159
Alignment:
Q  12 aagaatcagcaacaaaagcacctaagagaggaagtagagaagctgttccagcccaaacatttacattcttagcagctgttgcagtgctctgtttgagtgg 111  Q
    |||||||||||||||||||||| ||||||||||| ||||||||   ||||||||||| ||| ||||||| |||||| ||||||||||| |||||||||||    
T  11684359 aagaatcagcaacaaaagcaccaaagagaggaaggagagaagcaactccagcccaaatattcacattctcagcagcagttgcagtgctttgtttgagtgg 11684260  T
Q  112 ccctgttagatatgatatcaaattcccttgaattccataatatgataccctctctgccacttccacacctaaacataacattcataatccatttaaattc 211  Q
     |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||  ||||| |||||    
T  11684259 tcctgttagatatgatatcaagttcccttgaatcccataatatgataccctctctgccacttccacacctatacaaaacattcataactcatttcaattc 11684160  T
Q  212 t 212  Q
    |    
T  11684159 t 11684159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 12 - 204
Target Start/End: Complemental strand, 11696176 - 11695984
Alignment:
Q  12 aagaatcagcaacaaaagcacctaagagaggaagtagagaagctgttccagcccaaacatttacattcttagcagctgttgcagtgctctgtttgagtgg 111  Q
    ||||||||||||  |||||||| |||||||||||||||||||| ||||||||||||| ||| ||||| | ||||||| |||||||||| |||||||||||    
T  11696176 aagaatcagcaatgaaagcaccaaagagaggaagtagagaagcagttccagcccaaatattcacattttcagcagcttttgcagtgctttgtttgagtgg 11696077  T
Q  112 ccctgttagatatgatatcaaattcccttgaattccataatatgataccctctctgccacttccacacctaaacataacattcataatccatt 204  Q
     ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||| ||| ||||    
T  11696076 tcctgttagatatgatatcaaattcccttgaattccataatatgatgccctctctgccatttccacacctaaatataacattcacaattcatt 11695984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 12 - 184
Target Start/End: Complemental strand, 11779155 - 11778983
Alignment:
Q  12 aagaatcagcaacaaaagcacctaagagaggaagtagagaagctgttccagcccaaacatttacattcttagcagctgttgcagtgctctgtttgagtgg 111  Q
    ||||||||||||  || ||||| ||||||||||| |||||||| ||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||    
T  11779155 aagaatcagcaatgaatgcaccaaagagaggaaggagagaagcagttccagcccaaacattcacattcttagcagcagttgcagtgctttgtttgagtgg 11779056  T
Q  112 ccctgttagatatgatatcaaattcccttgaattccataatatgataccctctctgccacttccacacctaaa 184  Q
    ||||||||||||||||||||| || || | ||  ||| ||||||| | |||||||||||| ||||||||||||    
T  11779055 ccctgttagatatgatatcaagtttcccttaaccccaaaatatgacatcctctctgccacctccacacctaaa 11778983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 29517890 - 29517841
Alignment:
Q  246 tttaatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||    
T  29517890 tttaatatgataatcgtccctgtaatttggttcaattttgattttcgtcc 29517841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 39263632 - 39263676
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgt 293  Q
    ||||||||  |||||||||||||||||||||||||||||||||||    
T  39263632 aatatgattttcgtccctgtaatttggaccagttttgattttcgt 39263676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 572224 - 572173
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccatata 300  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||| ||||    
T  572224 aatatgataattgtccctataatttggtccagttttgattttcgtccctata 572173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 295
Target Start/End: Complemental strand, 54110549 - 54110490
Alignment:
Q  237 taaagaaggtttaa-tatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||| ||||||||| ||||||||||||||||||||||||   ||||||||||||||||||    
T  54110549 taaaaaaggtttaaatatgataatcgtccctgtaatttgtttcagttttgattttcgtcc 54110490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 865421 - 865467
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||    
T  865421 aatatgataatcatccctgtaatttgggtcagttttgattttcgtcc 865467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 866325 - 866279
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||||||||||||||||| | | |||||||||||||||||    
T  866325 aatatgataatcgtccctgtaatttagtctagttttgattttcgtcc 866279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 29145290 - 29145244
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||||||||||||||||||| | | |||||||||||||||    
T  29145290 aatatgataatcgtccctgtaatttggtcaaattttgattttcgtcc 29145244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 42712187 - 42712141
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  42712187 aatatgatagtcgtccttgtaatttggaccagttttgatttttgtcc 42712141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 295
Target Start/End: Complemental strand, 6711155 - 6711121
Alignment:
Q  261 gtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||||||||||||||| ||||||||    
T  6711155 gtccctgtaatttggaccagttttgaatttcgtcc 6711121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 9170741 - 9170695
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||| | |||| ||||| |||||||||||||||||||    
T  9170741 aatatgataatcgttcttgtattttggtccagttttgattttcgtcc 9170695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 29144902 - 29144856
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||||||||||||||||||  | | |||||||||||||||    
T  29144902 aatatgataatcgtccctgtaatttgatcaaattttgattttcgtcc 29144856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 291
Target Start/End: Complemental strand, 48615273 - 48615231
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttc 291  Q
    ||||||||| |||||| |||||||||||| |||||||||||||    
T  48615273 aatatgatattcgtccatgtaatttggacgagttttgattttc 48615231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 291
Target Start/End: Original strand, 54109504 - 54109546
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttc 291  Q
    |||||||||||||||||||||||||   |||||||||||||||    
T  54109504 aatatgataatcgtccctgtaatttactccagttttgattttc 54109546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 6056415 - 6056460
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtc 294  Q
    |||||||||||||||||| |||||| |  |||||||||||||||||    
T  6056415 aatatgataatcgtccctataatttagggcagttttgattttcgtc 6056460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 48614230 - 48614275
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtc 294  Q
    |||||||||||||||| ||||| |||| |||||||| |||||||||    
T  48614230 aatatgataatcgtccgtgtaaattggtccagttttaattttcgtc 48614275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 24573734 - 24573778
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgt 293  Q
    ||||||||||  ||| ||||||||||| |||||||||||||||||    
T  24573734 aatatgataactgtctctgtaatttggtccagttttgattttcgt 24573778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 53535642 - 53535606
Alignment:
Q  259 tcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||||||||| || ||||||||||||||||    
T  53535642 tcgtccctgtaatttgggcccgttttgattttcgtcc 53535606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 16618 - 16413
Alignment:
Q  12 aagaatcagcaacaaaagcacctaagagaggaagtagagaagctgttccagcccaaacatttacattcttagcagctgttgcagtgctctgtttgagtgg 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||    
T  16618 aagaatcagcaacgaaagcacctaagagaggaagtagagaagcagttccagcccaaatattcacattcttagcagctgttgcagtgctttgtttgagtgg 16519  T
Q  112 ccctgttagatatgatatcaaattcccttgaattccataatatgataccctctctgccacttccacacctaaacataacattcataatccatttaaattc 211  Q
     |||||||||||||||||||| || || | ||| |||  |||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  16518 tcctgttagatatgatatcaagtttcccttaatcccaatatatgatatcctctctgctacttccacacctaaacataacattcataatccatttcaattc 16419  T
Q  212 tcatca 217  Q
    ||||||    
T  16418 tcatca 16413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 7601762 - 7601716
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  7601762 aatatgataatcgtccctgtaatttgggccagttttgattttcgtcc 7601716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 40784812 - 40784858
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  40784812 aatatgataatcgtccctgtaatttggtccagttttgattttcgtcc 40784858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 42093432 - 42093478
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  42093432 aatatgataatcgtccctgtaatttgaaccagttttgattttcgtcc 42093478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 11596626 - 11596580
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||    
T  11596626 aatatgagaatcgtcccagtaatttggaccagttttgattttcgtcc 11596580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 41723214 - 41723265
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccatata 300  Q
    ||||||||||||||||||||||||||| | ||||||||||| ||||| ||||    
T  41723214 aatatgataatcgtccctgtaatttggtcaagttttgatttccgtccctata 41723265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 291
Target Start/End: Complemental strand, 14446103 - 14446061
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttc 291  Q
    ||||||||||||||||||||||||||| ||| |||||||||||    
T  14446103 aatatgataatcgtccctgtaatttgggccaattttgattttc 14446061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 30427086 - 30427132
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||    
T  30427086 aatatgataatcgtccctgtaatttggttcagtttttattttcgtcc 30427132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 40575913 - 40575870
Alignment:
Q  250 atatgataatcgtccctgtaatttggaccagttttgattttcgt 293  Q
    |||||||||||||| || ||||||||||||||| ||||||||||    
T  40575913 atatgataatcgtctctataatttggaccagttatgattttcgt 40575870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 15224757 - 15224803
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||  ||||||||||||||||| || ||||||||||||||||    
T  15224757 aatatgattttcgtccctgtaatttgggcccgttttgattttcgtcc 15224803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 293
Target Start/End: Complemental strand, 35627092 - 35627058
Alignment:
Q  259 tcgtccctgtaatttggaccagttttgattttcgt 293  Q
    |||||||||||||||||| ||||||||||||||||    
T  35627092 tcgtccctgtaatttggatcagttttgattttcgt 35627058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 37727107 - 37727153
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||  |||||| |||||||| |||||||||||||||||||||    
T  37727107 aatatgattttcgtccatgtaatttagaccagttttgattttcgtcc 37727153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 295
Target Start/End: Complemental strand, 39529604 - 39529570
Alignment:
Q  261 gtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||||| ||||||||||||||||||    
T  39529604 gtccctgtaatttggatcagttttgattttcgtcc 39529570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 30136771 - 30136730
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgatttt 290  Q
    |||||||||||||||| ||||||||| |||| ||||||||||    
T  30136771 aatatgataatcgtccatgtaatttgaaccaattttgatttt 30136730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 16899915 - 16899961
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  16899915 aatatgataatcgtccctgtaatttggtccagttttgattttcgtcc 16899961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 6895253 - 6895207
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||    
T  6895253 aatatgataatcgtccttgtaatttggtccagttttgattttcgtcc 6895207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 40366265 - 40366311
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||    
T  40366265 aatatgataatcgtccctgtaatttgggtcagttttgattttcgtcc 40366311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 31559089 - 31559038
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccatata 300  Q
    ||||||||||||||| ||||||||| | ||||||||||||||||||| ||||    
T  31559089 aatatgataatcgtcactgtaattttggccagttttgattttcgtccctata 31559038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 3099142 - 3099096
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||||| |||||||||| |||||||| ||||||||||    
T  3099142 aatatgataatcgtccatgtaatttggtccagttttaattttcgtcc 3099096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 39084367 - 39084321
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||||||| |||||||| ||| |||||||||||||||    
T  39084367 aatatgataatcgtccctctaatttgggccaattttgattttcgtcc 39084321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 3098310 - 3098355
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtc 294  Q
    ||||||||||||||||||||||||| |  |||||||||||||||||    
T  3098310 aatatgataatcgtccctgtaatttaggtcagttttgattttcgtc 3098355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 32694825 - 32694780
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtc 294  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  32694825 aatatgataatcgcccctgtagtttgggccagttttgattttcgtc 32694780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 31558244 - 31558292
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccat 297  Q
    ||||||||||||||| ||||||||||   ||||||||||||||||||||    
T  31558244 aatatgataatcgtcactgtaatttgagtcagttttgattttcgtccat 31558292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 6894356 - 6894402
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||| ||||| |||||| | |||||||||||||||||||    
T  6894356 aatatgataatcatccctctaatttaggccagttttgattttcgtcc 6894402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 19432596 - 19432550
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||| ||||||||||||  ||||||||||||| ||||    
T  19432596 aatatgataatcgttcctgtaatttggttcagttttgatttttgtcc 19432550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 290
Target Start/End: Original strand, 29096816 - 29096874
Alignment:
Q  233 aatataaagaaggtttaa-tatgataatcgtccctgtaatttggaccagttttgatttt 290  Q
    |||||||  ||||||||| ||||| |||||||| |||||||||| ||||||||||||||    
T  29096816 aatataagaaaggtttaaatatgaaaatcgtccatgtaatttggtccagttttgatttt 29096874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 38914329 - 38914283
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||  |||||||| |||||| |||||||||||||||||||||    
T  38914329 aatatgattttcgtccctataatttagaccagttttgattttcgtcc 38914283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 54280858 - 54280904
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  54280858 aatatgataatcgtccctgtaatttggtccagttttgattttcgtcc 54280904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 21103657 - 21103611
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||    
T  21103657 aatatgattttcgtccctgtaatttggaccagttttgattttcgtcc 21103611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 42121791 - 42121747
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgt 293  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||    
T  42121791 aatatgataatcgtccctataatttggaccagttttaattttcgt 42121747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 31090679 - 31090730
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccatata 300  Q
    ||||||||  |||||||||||||||||||| |||||||||||||||| ||||    
T  31090679 aatatgattttcgtccctgtaatttggacccgttttgattttcgtccctata 31090730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 293
Target Start/End: Complemental strand, 43631278 - 43631220
Alignment:
Q  236 ataaagaaggtttaa-tatgataatcgtccctgtaatttggaccagttttgattttcgt 293  Q
    |||||||||| |||| |||||||||||||| ||| |||||| |||||||||||||||||    
T  43631278 ataaagaaggcttaaatatgataatcgtccatgtgatttggtccagttttgattttcgt 43631220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 43656267 - 43656221
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||    
T  43656267 aatatgataatcgtccttgtaatttgggacagttttgattttcgtcc 43656221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 54295149 - 54295103
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||    
T  54295149 aatatgataatcgtccatgtaatttgggtcagttttgattttcgtcc 54295103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 295
Target Start/End: Complemental strand, 44707616 - 44707557
Alignment:
Q  236 ataaagaaggtttaatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||| | || ||||||||  ||||||||||||||||||||  |||||||||||||||    
T  44707616 ataaagaggcttaaatatgattttcgtccctgtaatttggacccattttgattttcgtcc 44707557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 41780448 - 41780402
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||  |||||||||||||||||||| ||||||||||| ||||    
T  41780448 aatatgattttcgtccctgtaatttggacccgttttgatttttgtcc 41780402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 42489333 - 42489287
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||| |||| ||||||||||  ||||||||||||||||||    
T  42489333 aatatgataattgtccttgtaatttgggtcagttttgattttcgtcc 42489287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 51218110 - 51218156
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||| |||||| |||||||| ||||||||||| |||||||    
T  51218110 aatatgataattgtccctataatttggtccagttttgatattcgtcc 51218156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 34985099 - 34985152
Alignment:
Q  244 ggtttaatatgataatcgtccctgtaatttggaccagttttgattttcgtccat 297  Q
    |||| ||||| |||||||||  |||||||||| ||| |||||||||||||||||    
T  34985099 ggttaaatataataatcgtctgtgtaatttggtccaattttgattttcgtccat 34985152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 42488457 - 42488502
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtc 294  Q
    |||||||||||| |||||||||||||   |||||||||||||||||    
T  42488457 aatatgataatcatccctgtaatttgagtcagttttgattttcgtc 42488502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 15951558 - 15951522
Alignment:
Q  259 tcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||||||||| || ||||||||||||||||    
T  15951558 tcgtccctgtaatttgggcccgttttgattttcgtcc 15951522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 43655345 - 43655389
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgt 293  Q
    |||||||||||| ||| | |||||||| |||||||||||||||||    
T  43655345 aatatgataatcatccatttaatttgggccagttttgattttcgt 43655389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 53428018 - 53427978
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattt 289  Q
    ||||||||||||||  ||||||||||| |||||||||||||    
T  53428018 aatatgataatcgtttctgtaatttggtccagttttgattt 53427978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 39841320 - 39841274
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  39841320 aatatgataatcgtccctgtaatttggtccagttttgattttcgtcc 39841274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 43380590 - 43380545
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtc 294  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  43380590 aatatgataatcgtccctgtaatttggatcagttttgattttcgtc 43380545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 51465757 - 51465803
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  51465757 aatatgataatagtccctgtaatttggatcagttttgattttcgtcc 51465803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 29374010 - 29373965
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtc 294  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||    
T  29374010 aatatgataatcgtccttgtaatttggatcagttttgattttcgtc 29373965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 41147331 - 41147287
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgt 293  Q
    |||||||||||||||| |||||||||| |||||||||||||||||    
T  41147331 aatatgataatcgtccttgtaatttgggccagttttgattttcgt 41147287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 171493 - 171447
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||||||| ||||||||||   ||||||||||||||||||    
T  171493 aatatgataatcgtctctgtaatttgagtcagttttgattttcgtcc 171447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 1743212 - 1743258
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||||||| |||||| |  ||||||||||||||||||    
T  1743212 aatatgataatcgtccctataatttagttcagttttgattttcgtcc 1743258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 16878751 - 16878797
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||  |||||||||||||||| ||| ||||||||||||||||    
T  16878751 aatatgattttcgtccctgtaatttgaacccgttttgattttcgtcc 16878797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 46728769 - 46728723
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||||||| ||||| |||||  ||||||||||||||||||    
T  46728769 aatatgataatcgtcactgtagtttgggtcagttttgattttcgtcc 46728723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 39025382 - 39025427
Alignment:
Q  250 atatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||  |||||||||||||| ||| |||||||||||||||    
T  39025382 atatgataattatccctgtaatttggtccaattttgattttcgtcc 39025427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 1744072 - 1744028
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgt 293  Q
    |||||||||||| ||  |||||||||| |||||||||||||||||    
T  1744072 aatatgataatcatctatgtaatttgggccagttttgattttcgt 1744028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 23551686 - 23551722
Alignment:
Q  259 tcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||||||||  ||||||||||||||||    
T  23551686 tcgtccctgtaatttggacgcgttttgattttcgtcc 23551722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 30856950 - 30856906
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgt 293  Q
    |||||||||||| ||||| |||||||| | |||||||||||||||    
T  30856950 aatatgataatcttccctataatttggtctagttttgattttcgt 30856906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 3184691 - 3184736
Alignment:
Q  250 atatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  3184691 atatgataatcgtccctgtaatttggacaagttttgattttcgtcc 3184736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 544345 - 544391
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  544345 aatatgataatcgtctctgtaatttggtccagttttgattttcgtcc 544391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 291
Target Start/End: Complemental strand, 1175156 - 1175114
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttc 291  Q
    ||||||||  |||||||||||||||||||| ||||||||||||    
T  1175156 aatatgattttcgtccctgtaatttggacccgttttgattttc 1175114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 295
Target Start/End: Original strand, 32403993 - 32404027
Alignment:
Q  261 gtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||||||||||| |||||||||||||||    
T  32403993 gtccctgtaatttggaccacttttgattttcgtcc 32404027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 44075841 - 44075886
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtc 294  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  44075841 aatatgataatcgtccctgtaatttggtccagttttgattttcgtc 44075886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 39233984 - 39233933
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccatata 300  Q
    |||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  39233984 aatatgataatcgtccctgtaatttggttcaattttgattttcgtccatata 39233933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 2215092 - 2215046
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  2215092 aatataataatcgtccctgtaatttgggccagttttgattttcgtcc 2215046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 3834932 - 3834978
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||    
T  3834932 aatatgataatcgtccctgtaatttggtctagttttgattttcgtcc 3834978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 18234196 - 18234242
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  18234196 aatatgatattcgtctctgtaatttggaccagttttgattttcgtcc 18234242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 2076464 - 2076415
Alignment:
Q  246 tttaatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  2076464 tttaatatgataattgtccctataatttggtccagttttgattttcgtcc 2076415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 2075679 - 2075730
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccatata 300  Q
    ||||||||||||||||||||||||| |  |||||||||||||||||| ||||    
T  2075679 aatatgataatcgtccctgtaatttaggtcagttttgattttcgtccctata 2075730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 5429850 - 5429804
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||||||| |||||||| ||| |||||||||||||||    
T  5429850 aatatgataatcgtccctataatttggtccaattttgattttcgtcc 5429804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 25455792 - 25455841
Alignment:
Q  246 tttaatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||||||||| ||||||||| |||||| ||| ||||||||    
T  25455792 tttaatatgataatcgtccccgtaatttgggccagttatgaatttcgtcc 25455841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 291
Target Start/End: Original strand, 914385 - 914427
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttc 291  Q
    ||||||||||||||||||||||||| |  ||||||||||||||    
T  914385 aatatgataatcgtccctgtaatttaggtcagttttgattttc 914427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 5429055 - 5429101
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||| ||| |||||||||||||||  ||||||||||||||||||    
T  5429055 aatatgaaaattgtccctgtaatttggttcagttttgattttcgtcc 5429101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 8873691 - 8873737
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||  |||||||||||||||||||| ||||| ||||||||||    
T  8873691 aatatgattttcgtccctgtaatttggacccgttttaattttcgtcc 8873737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 16011371 - 16011417
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||| | |||||||| | |||||||||||||||||||    
T  16011371 aatatgataatcgttcttgtaatttagtccagttttgattttcgtcc 16011417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 28784870 - 28784824
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||| ||||||||| ||||||||||| | |||||||||||||||||    
T  28784870 aatattataatcgtctctgtaatttggtcaagttttgattttcgtcc 28784824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 291
Target Start/End: Original strand, 35907371 - 35907413
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttc 291  Q
    ||||||||||| ||||||||||||||| | |||||||||||||    
T  35907371 aatatgataattgtccctgtaatttggtctagttttgattttc 35907413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 28783812 - 28783860
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccat 297  Q
    |||||||||||||||| |||||||| | ||| |||| ||||||||||||    
T  28783812 aatatgataatcgtccatgtaatttagtccaattttaattttcgtccat 28783860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 39475410 - 39475454
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgt 293  Q
    ||||| ||||||||| ||||||||||  |||||||||||||||||    
T  39475410 aatataataatcgtctctgtaatttgatccagttttgattttcgt 39475454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 37796603 - 37796649
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||    
T  37796603 aatatgataatcgtccctgtaatttgggtcagttttgattttcgtcc 37796649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 41345484 - 41345438
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||    
T  41345484 aatatgataatcgtccctataatttggtccagttttgattttcgtcc 41345438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 14419395 - 14419441
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||||    
T  14419395 aatatgataatcgtccctgtattttggggcagttttgattttcgtcc 14419441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 21985631 - 21985585
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||  |||||||||||||||||||| ||||||||||||||||    
T  21985631 aatatgattttcgtccctgtaatttggacccgttttgattttcgtcc 21985585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 291
Target Start/End: Original strand, 26828771 - 26828813
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttc 291  Q
    ||||||||||| ||||||||||||||| |||||||||||||||    
T  26828771 aatatgataattgtccctgtaatttggtccagttttgattttc 26828813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 47723531 - 47723485
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||  |||||||| ||||||||||||||||||||||||||||    
T  47723531 aatatgattttcgtccctataatttggaccagttttgattttcgtcc 47723485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 26829669 - 26829629
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattt 289  Q
    ||||||||||||||||||||||||| | |||||||||||||    
T  26829669 aatatgataatcgtccctgtaatttagtccagttttgattt 26829629  T

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Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 6822610 - 6822656
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||| ||||||||||||||| | ||||||| |||||||||    
T  6822610 aatatgataattgtccctgtaatttggtcaagttttggttttcgtcc 6822656  T

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Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 46196791 - 46196746
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgtc 294  Q
    ||||||||||||||||||||||||||| |||  ||| |||||||||    
T  46196791 aatatgataatcgtccctgtaatttggtccaaattttattttcgtc 46196746  T

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Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 7945349 - 7945385
Alignment:
Q  259 tcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    |||||||||||||||||||  ||||||||||||||||    
T  7945349 tcgtccctgtaatttggacacgttttgattttcgtcc 7945385  T

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Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 11337754 - 11337718
Alignment:
Q  259 tcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||||||||| || ||||||||||||||||    
T  11337754 tcgtccctgtaatttgggcccgttttgattttcgtcc 11337718  T

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Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 21984874 - 21984910
Alignment:
Q  259 tcgtccctgtaatttggaccagttttgattttcgtcc 295  Q
    ||||||||||||||||| || ||||||||||||||||    
T  21984874 tcgtccctgtaatttgggcccgttttgattttcgtcc 21984910  T

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Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 40193866 - 40193910
Alignment:
Q  249 aatatgataatcgtccctgtaatttggaccagttttgattttcgt 293  Q
    ||||||||||||||| |||||||||||  || |||||||||||||    
T  40193866 aatatgataatcgtcgctgtaatttgggtcaattttgattttcgt 40193910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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