View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21043_low_38 (Length: 278)
Name: NF21043_low_38
Description: NF21043
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21043_low_38 |
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Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 18 - 271
Target Start/End: Original strand, 46061917 - 46062170
Alignment:
| Q |
18 |
aatctgcaccttttaccatactgctcttagcaagttttaagtagaggttgccatatctgaaataccacaaaaaccaacatcagataattaatatcaaaca |
117 |
Q |
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| T |
46061917 |
aatctgcaccttttaccatactgctcttagcaagttttaagtagaggttgccatatctgaaataccacaaaaaccaacatcagataattaatatcaaaca |
46062016 |
T |
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| Q |
118 |
acttaactagggcctcacnnnnnnnccaattcaaattataaaactcaagcaaaccagaacaaatcaagaaatgtgatatcattcaaaccttgcagtagaa |
217 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46062017 |
acttaactagggcctcacaaaaaaaccaattcaaattataaaactcaagcaaaccagaacaaatcaagaaatgtgatatcattcaaaccttgcagtagaa |
46062116 |
T |
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| Q |
218 |
cccttaagcgtattaactttctctacaagtctggaaaagacaatcttcttctca |
271 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46062117 |
cccttaagcgtattaactttctctacaagtctggaaaagacaatcttcttctca |
46062170 |
T |
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