View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21045_low_32 (Length: 307)
Name: NF21045_low_32
Description: NF21045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21045_low_32 |
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Alignment Details
Target: chr3 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 20 - 296
Target Start/End: Complemental strand, 48528105 - 48527829
Alignment:
| Q |
20 |
ataagaaccattcacttcataaaaaacaaattattgttttgtttgtttattttaggtgattttaaaattaaaacaagagggtttatgtagtgcatcctga |
119 |
Q |
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| T |
48528105 |
ataagaaccattcacttcataaaaaacaaattattgttttgtttgtttattttaggtgattttaaaattaaaacaagagggtttatgtagtgcatcctga |
48528006 |
T |
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| Q |
120 |
ttcaccaatttcgtgtttggttgataacaaaaacgttttagttctaaccaccgcatattgagaatagtaatgtgtaaattaggttctaaatgaaggttgg |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48528005 |
ttcaccaatttcgtgtttggttgataacaaaaacgttttagttctaaccaccgcatattgagaatagtaatgtgtaaattaggttctaaatgaaggttgg |
48527906 |
T |
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| Q |
220 |
aaaatctattcacagaataaataaaggatttaaggcttctttcctttacaaccatctcatagcttgttccttttcat |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48527905 |
aaaatctattcacagaataaataaaggatttaaggcttctttcctttacaaccatctcatagcttgttccttttcat |
48527829 |
T |
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