View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21045_low_33 (Length: 301)
Name: NF21045_low_33
Description: NF21045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21045_low_33 |
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Alignment Details
Target: chr5 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 16 - 291
Target Start/End: Original strand, 9888158 - 9888433
Alignment:
| Q |
16 |
cattttgcagttatgttattgaactggtgggtcacgatttcctatatgaggcaagaaacaacactcgtttagggttcaannnnnnnatgaaaagaaatat |
115 |
Q |
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| T |
9888158 |
cattttgcagttatgttattgaactggtgggtcacgatttcctatatgaggcaagaaacaacactcgtttagggttcaatttttttatgaaaagaaatat |
9888257 |
T |
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| Q |
116 |
gaggaatacgatttctaaacaattcaaattgaagatcaaccttggaaataagattggggctttattatcatcatcattatcaaccttggaaatttgttaa |
215 |
Q |
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||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
9888258 |
gaggaatgcgatttctaaacaattcaaactgaagatcaaccttggaaataagattggggctttattatcatcatcattatcaaccttggaaattggttaa |
9888357 |
T |
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| Q |
216 |
aagtgtaatgttgacaccgtaattttcacaggtgatcagaaaattagcatgggagcagtcttactggatgatgatg |
291 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |
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| T |
9888358 |
aagtgtaatgttgacacagtaattttcacaggtgatcagaaaattagcatgtgagcagtcttactggatggtgatg |
9888433 |
T |
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