View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21045_low_42 (Length: 251)

Name: NF21045_low_42
Description: NF21045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21045_low_42
NF21045_low_42
[»] chr4 (53 HSPs)
chr4 (19-128)||(10166521-10166630)
chr4 (158-220)||(28116749-28116811)
chr4 (132-217)||(7400097-7400182)
chr4 (158-220)||(8151297-8151359)
chr4 (158-211)||(36189974-36190027)
chr4 (132-209)||(7365903-7365980)
chr4 (132-217)||(55991920-55992005)
chr4 (158-209)||(1166745-1166796)
chr4 (158-209)||(1169227-1169278)
chr4 (158-209)||(11200941-11200992)
chr4 (125-209)||(13890876-13890960)
chr4 (158-209)||(27288389-27288440)
chr4 (158-209)||(53274736-53274787)
chr4 (158-216)||(17976546-17976604)
chr4 (158-219)||(52620718-52620779)
chr4 (158-209)||(17624770-17624821)
chr4 (158-209)||(32206509-32206560)
chr4 (158-209)||(34663961-34664012)
chr4 (158-209)||(55208400-55208451)
chr4 (159-217)||(28361410-28361468)
chr4 (158-208)||(45019181-45019231)
chr4 (158-217)||(26111479-26111539)
chr4 (158-209)||(8848046-8848097)
chr4 (125-209)||(34264514-34264598)
chr4 (158-209)||(39651838-39651889)
chr4 (158-209)||(40951052-40951103)
chr4 (158-209)||(46045716-46045767)
chr4 (158-204)||(32200633-32200679)
chr4 (159-217)||(34664920-34664978)
chr4 (159-216)||(37873560-37873618)
chr4 (160-209)||(23628941-23628990)
chr4 (132-209)||(346494-346571)
chr4 (161-209)||(11966923-11966971)
chr4 (158-220)||(8654230-8654293)
chr4 (131-203)||(10581874-10581946)
chr4 (160-203)||(18138452-18138495)
chr4 (158-209)||(32139522-32139573)
chr4 (160-203)||(49125663-49125706)
chr4 (159-217)||(24303720-24303778)
chr4 (158-216)||(55188270-55188328)
chr4 (128-220)||(24630988-24631080)
chr4 (158-217)||(41106039-41106098)
chr4 (165-220)||(43117613-43117668)
chr4 (158-209)||(44856690-44856741)
chr4 (158-220)||(9097387-9097449)
chr4 (158-203)||(20681304-20681348)
chr4 (158-219)||(41986199-41986260)
chr4 (160-220)||(18002441-18002500)
chr4 (172-207)||(30071449-30071484)
chr4 (160-207)||(51450076-51450123)
chr4 (158-220)||(19588003-19588065)
chr4 (160-209)||(40952126-40952175)
chr4 (185-217)||(6940117-6940149)
[»] chr2 (34 HSPs)
chr2 (126-217)||(7274772-7274863)
chr2 (158-220)||(1835782-1835844)
chr2 (128-217)||(31972383-31972472)
chr2 (132-217)||(36085835-36085920)
chr2 (129-217)||(4631313-4631401)
chr2 (158-220)||(668206-668268)
chr2 (158-220)||(17032728-17032790)
chr2 (158-220)||(17051064-17051126)
chr2 (163-220)||(38959564-38959621)
chr2 (132-209)||(8683768-8683845)
chr2 (158-209)||(971063-971114)
chr2 (158-209)||(8878229-8878280)
chr2 (158-217)||(20313162-20313221)
chr2 (158-216)||(3079818-3079876)
chr2 (158-220)||(34912748-34912810)
chr2 (158-220)||(40202312-40202374)
chr2 (132-209)||(3243183-3243260)
chr2 (158-209)||(3324178-3324229)
chr2 (158-209)||(5166376-5166427)
chr2 (163-217)||(24926005-24926059)
chr2 (158-203)||(35423894-35423939)
chr2 (161-217)||(1118080-1118136)
chr2 (158-217)||(18166749-18166808)
chr2 (163-209)||(36078481-36078527)
chr2 (158-220)||(41452912-41452974)
chr2 (160-207)||(9799239-9799286)
chr2 (158-209)||(10120719-10120770)
chr2 (161-220)||(35287226-35287285)
chr2 (158-220)||(2180116-2180178)
chr2 (158-220)||(13549490-13549552)
chr2 (162-220)||(38879233-38879291)
chr2 (160-220)||(20641972-20642031)
chr2 (170-209)||(45474831-45474870)
chr2 (158-196)||(32292307-32292345)
[»] chr1 (55 HSPs)
chr1 (130-220)||(9574959-9575049)
chr1 (130-209)||(43120665-43120744)
chr1 (128-209)||(40432083-40432164)
chr1 (158-217)||(7833646-7833705)
chr1 (130-217)||(17585616-17585703)
chr1 (159-217)||(38802406-38802464)
chr1 (158-220)||(39326959-39327021)
chr1 (161-217)||(11754146-11754202)
chr1 (128-209)||(33642719-33642800)
chr1 (132-209)||(41901588-41901665)
chr1 (158-209)||(25659724-25659775)
chr1 (158-209)||(33895131-33895182)
chr1 (158-217)||(46588007-46588066)
chr1 (130-209)||(33373707-33373786)
chr1 (158-220)||(33818010-33818072)
chr1 (158-220)||(33877478-33877540)
chr1 (161-217)||(31215782-31215838)
chr1 (161-217)||(31221537-31221593)
chr1 (158-217)||(3265217-3265276)
chr1 (158-217)||(14487239-14487298)
chr1 (158-217)||(17249136-17249195)
chr1 (158-209)||(33831845-33831896)
chr1 (158-209)||(33894008-33894059)
chr1 (161-220)||(45104278-45104337)
chr1 (160-209)||(17366271-17366320)
chr1 (159-220)||(36165435-36165496)
chr1 (132-209)||(11583264-11583340)
chr1 (158-217)||(31638331-31638390)
chr1 (161-220)||(33933013-33933072)
chr1 (158-209)||(47037045-47037095)
chr1 (158-220)||(16033008-16033070)
chr1 (158-220)||(23730210-23730271)
chr1 (158-203)||(39729120-39729165)
chr1 (163-220)||(40648494-40648551)
chr1 (160-209)||(44819821-44819870)
chr1 (160-220)||(36952630-36952690)
chr1 (161-209)||(43119032-43119080)
chr1 (161-209)||(46040405-46040453)
chr1 (163-209)||(43123147-43123193)
chr1 (160-205)||(16097457-16097502)
chr1 (159-220)||(18091375-18091436)
chr1 (160-209)||(45589724-45589773)
chr1 (158-209)||(49571309-49571357)
chr1 (160-220)||(5542103-5542163)
chr1 (160-208)||(34652383-34652431)
chr1 (158-206)||(39879056-39879104)
chr1 (170-214)||(43808835-43808879)
chr1 (161-220)||(12247685-12247744)
chr1 (158-220)||(17670081-17670143)
chr1 (158-220)||(34078379-34078440)
chr1 (158-207)||(28568671-28568720)
chr1 (165-220)||(11606385-11606440)
chr1 (158-205)||(36680038-36680085)
chr1 (158-207)||(44065358-44065407)
chr1 (158-207)||(49223258-49223307)
[»] chr3 (56 HSPs)
chr3 (128-220)||(7265153-7265245)
chr3 (132-209)||(29500442-29500519)
chr3 (128-209)||(45599151-45599232)
chr3 (128-217)||(54510272-54510361)
chr3 (158-217)||(22346994-22347053)
chr3 (158-217)||(48961217-48961276)
chr3 (158-217)||(54741907-54741966)
chr3 (158-220)||(26881718-26881780)
chr3 (130-209)||(52674891-52674970)
chr3 (127-217)||(19536807-19536897)
chr3 (128-209)||(4019026-4019107)
chr3 (128-209)||(7040990-7041071)
chr3 (128-209)||(14587271-14587352)
chr3 (132-217)||(36592105-36592190)
chr3 (132-209)||(53022775-53022852)
chr3 (158-209)||(15496385-15496436)
chr3 (158-209)||(30268998-30269049)
chr3 (158-217)||(50739254-50739313)
chr3 (158-217)||(50773542-50773601)
chr3 (158-209)||(52461137-52461188)
chr3 (158-205)||(875879-875926)
chr3 (158-209)||(12101377-12101428)
chr3 (158-209)||(36987654-36987705)
chr3 (158-209)||(37013093-37013144)
chr3 (158-209)||(48545219-48545270)
chr3 (158-220)||(41990680-41990742)
chr3 (159-209)||(54203667-54203717)
chr3 (160-209)||(47719592-47719641)
chr3 (161-209)||(29450769-29450817)
chr3 (158-209)||(33932402-33932453)
chr3 (158-209)||(35529773-35529824)
chr3 (158-209)||(39721367-39721418)
chr3 (158-209)||(46757669-46757720)
chr3 (158-216)||(33899928-33899986)
chr3 (163-217)||(37413670-37413724)
chr3 (160-209)||(2909543-2909592)
chr3 (158-215)||(54113520-54113577)
chr3 (161-209)||(13450385-13450432)
chr3 (160-220)||(46850630-46850690)
chr3 (158-209)||(34433455-34433506)
chr3 (158-217)||(42187665-42187724)
chr3 (158-217)||(44541218-44541277)
chr3 (158-220)||(32754243-32754305)
chr3 (158-219)||(52464882-52464943)
chr3 (159-220)||(54795955-54796016)
chr3 (158-194)||(38361874-38361910)
chr3 (163-214)||(46090037-46090088)
chr3 (158-200)||(35690122-35690164)
chr3 (158-220)||(46088635-46088697)
chr3 (170-202)||(10617736-10617768)
chr3 (158-209)||(20849317-20849368)
chr3 (161-220)||(47670453-47670512)
chr3 (159-194)||(50933332-50933367)
chr3 (161-204)||(12996731-12996772)
chr3 (159-203)||(20996251-20996295)
chr3 (165-205)||(42617672-42617712)
[»] scaffold0481 (2 HSPs)
scaffold0481 (161-217)||(4431-4487)
scaffold0481 (158-217)||(7551-7610)
[»] chr8 (47 HSPs)
chr8 (132-217)||(16845127-16845212)
chr8 (129-209)||(17045895-17045975)
chr8 (158-217)||(17313456-17313515)
chr8 (158-217)||(44908590-44908649)
chr8 (130-209)||(7219486-7219565)
chr8 (132-217)||(14718966-14719051)
chr8 (132-209)||(27467821-27467898)
chr8 (128-209)||(41361097-41361178)
chr8 (158-209)||(34805898-34805949)
chr8 (158-209)||(43817879-43817930)
chr8 (158-220)||(38139409-38139471)
chr8 (158-220)||(39525548-39525610)
chr8 (158-220)||(41526405-41526467)
chr8 (158-217)||(11924867-11924926)
chr8 (158-205)||(16239083-16239130)
chr8 (161-220)||(26518714-26518773)
chr8 (158-217)||(39998075-39998134)
chr8 (158-220)||(38137634-38137696)
chr8 (158-209)||(24511633-24511684)
chr8 (158-209)||(39485942-39485993)
chr8 (158-209)||(39685530-39685581)
chr8 (158-217)||(44655165-44655224)
chr8 (158-204)||(42844411-42844457)
chr8 (163-209)||(45138971-45139017)
chr8 (158-219)||(37034923-37034984)
chr8 (160-209)||(39140716-39140765)
chr8 (161-209)||(6816141-6816189)
chr8 (160-216)||(42984086-42984142)
chr8 (158-209)||(14449524-14449575)
chr8 (132-220)||(36216466-36216554)
chr8 (158-208)||(44602854-44602904)
chr8 (164-209)||(2184329-2184374)
chr8 (158-203)||(11579305-11579350)
chr8 (158-219)||(45296702-45296763)
chr8 (158-209)||(169620-169671)
chr8 (158-209)||(2190558-2190609)
chr8 (161-220)||(22947644-22947703)
chr8 (165-204)||(33848630-33848669)
chr8 (161-220)||(35004353-35004412)
chr8 (158-209)||(40048591-40048642)
chr8 (159-209)||(35916481-35916531)
chr8 (158-220)||(36059192-36059254)
chr8 (160-209)||(12261387-12261436)
chr8 (165-209)||(1877502-1877546)
chr8 (158-220)||(41903044-41903106)
chr8 (158-203)||(29868604-29868649)
chr8 (159-220)||(39201614-39201675)
[»] chr5 (51 HSPs)
chr5 (160-220)||(25821317-25821377)
chr5 (158-217)||(3297740-3297799)
chr5 (132-220)||(29383616-29383704)
chr5 (132-220)||(31939723-31939811)
chr5 (158-220)||(14205508-14205570)
chr5 (159-217)||(24759080-24759138)
chr5 (127-209)||(24027744-24027826)
chr5 (160-220)||(42322971-42323031)
chr5 (158-209)||(4374769-4374820)
chr5 (129-217)||(26379315-26379403)
chr5 (158-220)||(665476-665538)
chr5 (158-220)||(8314925-8314987)
chr5 (159-216)||(32261632-32261689)
chr5 (128-217)||(27176361-27176450)
chr5 (160-220)||(30503448-30503508)
chr5 (160-220)||(30543791-30543851)
chr5 (160-220)||(42416895-42416955)
chr5 (128-217)||(43396621-43396710)
chr5 (158-209)||(789977-790028)
chr5 (158-217)||(2475189-2475248)
chr5 (158-217)||(5589382-5589440)
chr5 (161-220)||(7536741-7536800)
chr5 (158-209)||(10042903-10042954)
chr5 (158-217)||(16050689-16050748)
chr5 (158-217)||(29874584-29874643)
chr5 (158-209)||(30503673-30503724)
chr5 (158-209)||(30544016-30544067)
chr5 (159-209)||(2530192-2530242)
chr5 (132-207)||(36088687-36088762)
chr5 (161-217)||(42110787-42110843)
chr5 (158-217)||(15976581-15976640)
chr5 (158-217)||(31884580-31884639)
chr5 (159-209)||(3246935-3246985)
chr5 (159-209)||(28746235-28746285)
chr5 (159-209)||(42111726-42111776)
chr5 (167-220)||(15875673-15875726)
chr5 (158-217)||(19361747-19361805)
chr5 (158-220)||(3213148-3213210)
chr5 (159-209)||(16488044-16488094)
chr5 (158-204)||(39783070-39783116)
chr5 (160-209)||(788943-788992)
chr5 (159-204)||(31958299-31958344)
chr5 (159-220)||(40506719-40506780)
chr5 (161-217)||(36083892-36083948)
chr5 (158-220)||(28887274-28887336)
chr5 (158-195)||(36514975-36515012)
chr5 (158-209)||(37147172-37147223)
chr5 (158-220)||(28869438-28869500)
chr5 (164-209)||(2001594-2001639)
chr5 (158-191)||(14720307-14720340)
chr5 (159-220)||(18041105-18041166)
[»] scaffold0178 (1 HSPs)
scaffold0178 (158-217)||(7204-7263)
[»] chr6 (24 HSPs)
chr6 (158-217)||(18593525-18593584)
chr6 (159-220)||(28472319-28472380)
chr6 (159-220)||(29859508-29859569)
chr6 (128-217)||(3850325-3850414)
chr6 (131-216)||(32244477-32244562)
chr6 (132-220)||(559824-559912)
chr6 (158-217)||(7541204-7541263)
chr6 (158-209)||(17505594-17505645)
chr6 (130-217)||(24046450-24046537)
chr6 (158-209)||(34206927-34206978)
chr6 (160-216)||(10943067-10943123)
chr6 (132-209)||(20791654-20791731)
chr6 (158-209)||(19988997-19989048)
chr6 (158-209)||(34247671-34247722)
chr6 (159-209)||(6018490-6018540)
chr6 (163-220)||(5414482-5414539)
chr6 (126-220)||(29977722-29977816)
chr6 (161-209)||(33945738-33945786)
chr6 (158-209)||(172967-173018)
chr6 (165-216)||(29043307-29043358)
chr6 (158-220)||(33976094-33976156)
chr6 (160-209)||(10945815-10945864)
chr6 (160-220)||(28231003-28231063)
chr6 (161-195)||(24162914-24162948)
[»] scaffold0166 (1 HSPs)
scaffold0166 (159-217)||(1574-1632)
[»] scaffold0020 (1 HSPs)
scaffold0020 (159-217)||(132759-132817)
[»] chr7 (43 HSPs)
chr7 (159-217)||(4407957-4408015)
chr7 (158-209)||(12908018-12908069)
chr7 (158-217)||(37669184-37669243)
chr7 (158-217)||(38045756-38045815)
chr7 (158-209)||(40239811-40239862)
chr7 (158-209)||(43156298-43156349)
chr7 (158-220)||(4399981-4400043)
chr7 (158-220)||(4406541-4406603)
chr7 (159-217)||(32960712-32960770)
chr7 (158-220)||(41343235-41343297)
chr7 (160-209)||(18956216-18956265)
chr7 (130-220)||(23639302-23639392)
chr7 (132-209)||(10999220-10999297)
chr7 (161-217)||(20135005-20135061)
chr7 (165-217)||(27031149-27031201)
chr7 (158-209)||(16933401-16933452)
chr7 (158-209)||(16938784-16938835)
chr7 (158-209)||(17278263-17278314)
chr7 (158-209)||(29448631-29448682)
chr7 (158-217)||(43111116-43111175)
chr7 (163-209)||(4492356-4492402)
chr7 (158-209)||(40035944-40035995)
chr7 (158-209)||(40789286-40789337)
chr7 (158-209)||(44651793-44651844)
chr7 (158-220)||(36765672-36765734)
chr7 (158-209)||(41427070-41427120)
chr7 (158-220)||(38049152-38049214)
chr7 (158-220)||(42828799-42828861)
chr7 (158-220)||(47171734-47171796)
chr7 (132-214)||(1448202-1448284)
chr7 (160-209)||(4404398-4404447)
chr7 (160-209)||(5483513-5483562)
chr7 (160-209)||(23154740-23154789)
chr7 (160-220)||(36769322-36769381)
chr7 (158-209)||(4616167-4616218)
chr7 (164-219)||(42915451-42915506)
chr7 (161-203)||(37143542-37143584)
chr7 (163-220)||(3840112-3840169)
chr7 (161-194)||(5526226-5526259)
chr7 (158-207)||(15641226-15641275)
chr7 (164-217)||(20482382-20482435)
chr7 (164-220)||(47840825-47840881)
chr7 (158-220)||(4490953-4491015)
[»] scaffold0197 (1 HSPs)
scaffold0197 (132-217)||(25810-25895)
[»] scaffold1793 (1 HSPs)
scaffold1793 (158-217)||(182-241)
[»] scaffold0198 (1 HSPs)
scaffold0198 (158-209)||(15174-15225)
[»] scaffold1822 (1 HSPs)
scaffold1822 (158-207)||(353-402)
[»] scaffold0027 (1 HSPs)
scaffold0027 (132-209)||(137918-137995)
[»] scaffold0024 (2 HSPs)
scaffold0024 (158-217)||(90374-90433)
scaffold0024 (158-217)||(110442-110501)
[»] scaffold0003 (1 HSPs)
scaffold0003 (158-216)||(229183-229241)
[»] scaffold0244 (1 HSPs)
scaffold0244 (161-220)||(7493-7552)
[»] scaffold0016 (1 HSPs)
scaffold0016 (158-220)||(99475-99537)
[»] scaffold0010 (2 HSPs)
scaffold0010 (158-220)||(50340-50402)
scaffold0010 (158-220)||(57873-57935)
[»] scaffold0038 (1 HSPs)
scaffold0038 (160-220)||(31500-31560)
[»] scaffold0318 (1 HSPs)
scaffold0318 (158-195)||(1174-1211)
[»] scaffold0006 (1 HSPs)
scaffold0006 (164-220)||(156492-156548)


Alignment Details
Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 10166630 - 10166521
Alignment:
Q  19 tggatggaggatgccatctcactaaccggagttcaacaacttctttttcgactaaaagacaaccacaataacatcatttgaggactgaatttgatagaaa 118  Q
    |||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  10166630 tggaaggaggatgccatctcactaaccgcggttcaacaacttctttttcgactaaaagacagccacaataacatcatttgaggactgaatttgattgaaa 10166531  T
Q  119 ctttctaaga 128  Q
    ||||||||||    
T  10166530 ctttctaaga 10166521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 28116749 - 28116811
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28116749 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaagttg 28116811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 7400097 - 7400182
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7400097 aggtaccgtttggtcaggttttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 7400182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 8151359 - 8151297
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  8151359 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaaactaaagttg 8151297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 36189974 - 36190027
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatg 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36189974 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatg 36190027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 7365980 - 7365903
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7365980 aggtaccgtttggtcaggttttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 7365903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 55992005 - 55991920
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||| |       |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  55992005 aggtaccgtttggtcagactttttttcggtctaaaaactactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 55991920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 1166796 - 1166745
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1166796 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 1166745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 1169278 - 1169227
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1169278 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 1169227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 11200992 - 11200941
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11200992 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 11200941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 13890876 - 13890960
Alignment:
Q  125 aagactaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||| ||| |       ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13890876 aagactaaggtaccgtttggccagactttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaa 13890960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 27288389 - 27288440
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27288389 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 27288440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 53274787 - 53274736
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53274787 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 53274736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 17976604 - 17976546
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaa 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  17976604 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaagctaaa 17976546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 52620779 - 52620718
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagtt 219  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  52620779 cggtctaaaagttactttaaaacaaagttaaaataaagctctttaagaaaaaaactaaagtt 52620718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 17624821 - 17624770
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17624821 cggtctaaaagctactttaaaacaaagttaaaataaagttctttaagaaaaa 17624770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 32206509 - 32206560
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32206509 cggtctaaaagctactttaaaataaagttaaaataaagctctttaagaaaaa 32206560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 34664012 - 34663961
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34664012 cggtctaaaagctactttaaaataaagttaaaataaagctctttaagaaaaa 34663961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 55208400 - 55208451
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  55208400 cggtctaaaagttactttaaaacaaagttaaaataaagctctttaagaaaaa 55208451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 28361410 - 28361468
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||    
T  28361410 ggtctaaaagctactttaaaacaaagttaaaataaagctctttcaggaaaaagctaaag 28361468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 45019181 - 45019231
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaa 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45019181 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaacaaaa 45019231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 26111539 - 26111479
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaga-aaaatgctaaag 217  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||    
T  26111539 cggtctaaaagctactttaaaacaaagttaaaataaagttctttaagataaaaggctaaag 26111479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 8848097 - 8848046
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  8848097 cggtctacaagctactttaaaacaaagttaaaataaagctctttaaggaaaa 8848046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 34264514 - 34264598
Alignment:
Q  125 aagactaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||| ||||||||||||| |||||       || ||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  34264514 aagacttaggtaccgtttggccaggctttttttcgatctaaaagctactttaatacaaagttaaaataaaactctttaagaaaaa 34264598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 39651889 - 39651838
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  39651889 cggtctaaaaactactttaaaacaaagttaaaataaagctctttaaggaaaa 39651838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 40951103 - 40951052
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  40951103 cggtctaaaagctactttaaaataaagttaaaataaaactctttaagaaaaa 40951052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 46045716 - 46045767
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  46045716 cggtctaaaagctactttaaaacaaagttaaaataaagctttttaaggaaaa 46045767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 204
Target Start/End: Original strand, 32200633 - 32200679
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaag 204  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  32200633 cggtctaaaagctattttaaaacaaagttaaaataaagctctttaag 32200679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 34664978 - 34664920
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||||||||||||||||||||||| |||||||  |||| |||||||    
T  34664978 ggtctaaaagctactttaaaacaaagttaaaataaagttctttaaagaaaaagctaaag 34664920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 37873560 - 37873618
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagtt-aaaataaagctctttaagaaaaatgctaaa 216  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||    
T  37873560 ggtctaaaagctactttaaaacaaagttaaaaataaagctctttaaggaaaaagctaaa 37873618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 23628990 - 23628941
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  23628990 gtctaaaagctactttaaaacaaagttaaaataaagttctttaaggaaaa 23628941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 346494 - 346571
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||| |       |||| ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  346494 aggtaccgtttggtcagactttttttcggtttaaaagctactttaaaacaaagtaaaaataaagctctttaaggaaaa 346571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 11966923 - 11966971
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  11966923 tctaaaagttactttaaaacaaagttaaaataaaactctttaagaaaaa 11966971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 8654230 - 8654293
Alignment:
Q  158 cggtctaaaagctacttt-aaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||||| ||||| ||||||||||    
T  8654230 cggtctaaaagttacttttaaaacaaagttaaaataaagccctttaaaaaaaaggctaaagttg 8654293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 10581874 - 10581946
Alignment:
Q  131 aaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaa 203  Q
    |||||||||||||||||||        |||||||||| ||||||||||||||| |||||||||||||||||||    
T  10581874 aaggtaccgtttggtcaggatttttttcggtctaaaaactactttaaaacaaaattaaaataaagctctttaa 10581946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 18138495 - 18138452
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaa 203  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  18138495 gtctaaaagctactttaaaataaagttaaaataaagctctttaa 18138452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 32139573 - 32139522
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||||||||||| | |||| ||||||    
T  32139573 cggtctaaaagctactttaaaacaaagttaaaataaagttttttaggaaaaa 32139522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 49125706 - 49125663
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaa 203  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  49125706 gtctaaaagctactttaaaataaagttaaaataaagctctttaa 49125663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 24303720 - 24303778
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||||||| ||||||||||||||||  |||||| |||| |||||||    
T  24303720 ggtctaaaagctactttaaaataaagttaaaataaagccatttaaggaaaaagctaaag 24303778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 55188328 - 55188270
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaa 216  Q
    ||||||||||  || ||||||| ||||||||||||||||||||||||||||| ||||||    
T  55188328 cggtctaaaaattattttaaaataaagttaaaataaagctctttaagaaaaaggctaaa 55188270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 24630988 - 24631080
Alignment:
Q  128 actaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||  |||||       |||||||||||||||||| || |||||||||||||||| | ||||||||| | | ||||||||    
T  24630988 actaaggtaccgtttgaccaggcttttttccggtctaaaagctactttgaatcaaagttaaaataaaggtttttaagaaagaagttaaagttg 24631080  T

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Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 41106098 - 41106039
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||| || ||||||||||||| ||||||||||| |||||||||| | |||||||    
T  41106098 cggtctaaaaactcctttaaaacaaagataaaataaagccctttaagaaagaagctaaag 41106039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 43117668 - 43117613
Alignment:
Q  165 aaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||| |||||||||||||||||||||| |||||| |||| | ||||||||    
T  43117668 aaagctacttaaaaacaaagttaaaataaagctttttaagtaaaaagttaaagttg 43117613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 44856741 - 44856690
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||| |||||||| ||||||||||||||||||||||||| |||||| |||||    
T  44856741 cggtttaaaagctcctttaaaacaaagttaaaataaagccctttaaaaaaaa 44856690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 9097387 - 9097449
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||| ||||| ||||||||||||||||||||  |||||||||| | || |||||||    
T  9097387 cggtctaaaagttacttcaaaacaaagttaaaataaaggcctttaagaaagaagcaaaagttg 9097449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 20681348 - 20681304
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaa 203  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||    
T  20681348 cggtctaaaagctactttaaaataaagtt-aaataaagctctttaa 20681304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 41986199 - 41986260
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagtt 219  Q
    ||||||||||| ||||| |||| |||||||||||||||  |||||||||| | |||||||||    
T  41986199 cggtctaaaagttacttgaaaataaagttaaaataaaggcctttaagaaagaagctaaagtt 41986260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 18002441 - 18002500
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||| ||||||||||| |||| |||||| |||| | ||||||||    
T  18002441 gtctaaaagctactttaaaac-aagttaaaatacagctatttaaggaaaaagttaaagttg 18002500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 207
Target Start/End: Complemental strand, 30071484 - 30071449
Alignment:
Q  172 ctttaaaacaaagttaaaataaagctctttaagaaa 207  Q
    |||||||||||||||||||||||| |||||||||||    
T  30071484 ctttaaaacaaagttaaaataaagatctttaagaaa 30071449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 51450123 - 51450076
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaa 207  Q
    ||||||||| ||||| |||||||||| ||||||||| |||||||||||    
T  51450123 gtctaaaagttacttcaaaacaaagtaaaaataaaggtctttaagaaa 51450076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 19588065 - 19588003
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||| ||||| || |||||||||||||||||   ||||||||| | ||||||||||    
T  19588065 cggtctaaaagttacttcaagacaaagttaaaataaaggcttttaagaaagaagctaaagttg 19588003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 40952175 - 40952126
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||| ||||||||||| ||||||||||||||| | |||||| ||||    
T  40952175 gtctaaaaactactttaaaataaagttaaaataaagttttttaaggaaaa 40952126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 6940117 - 6940149
Alignment:
Q  185 ttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||||||||||| |||||||    
T  6940117 ttaaaataaagctctttaagaaaaaggctaaag 6940149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 7274863 - 7274772
Alignment:
Q  126 agactaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7274863 agactaaggtaccgtttggtcaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 7274772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 1835844 - 1835782
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1835844 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaagttg 1835782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 31972472 - 31972383
Alignment:
Q  128 actaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||| |||||       |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31972472 actaaggtaccgtttggccaggctttttttcggtttaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgttaaag 31972383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 36085835 - 36085920
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  36085835 aggtaccgtttggtcaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaagatctttaagaaaaaggctaaag 36085920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 4631401 - 4631313
Alignment:
Q  129 ctaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||| |||||       || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4631401 ctaaggtaccgtttggccaggctttttttcgatctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 4631313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 668206 - 668268
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  668206 cggtctaaaagctactttaaaacaaagttaaaataaagttctttaagaaaaaagctaaagttg 668268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 17032728 - 17032790
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  17032728 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaagttaaagttg 17032790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 17051064 - 17051126
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  17051064 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaagttaaagttg 17051126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 38959564 - 38959621
Alignment:
Q  163 taaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38959564 taaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaagttg 38959621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 8683845 - 8683768
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||| |||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8683845 aggtaccgtttggccaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 8683768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 971114 - 971063
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  971114 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 971063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 8878280 - 8878229
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8878280 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 8878229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 20313162 - 20313221
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  20313162 cggtctaaaagttactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 20313221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 3079876 - 3079818
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaa 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  3079876 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaagctaaa 3079818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 34912810 - 34912748
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||    
T  34912810 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaagttaaagttg 34912748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 40202374 - 40202312
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||    
T  40202374 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaagttaaagttg 40202312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 3243183 - 3243260
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||| |||||       ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3243183 aggtaccgtttggccaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaa 3243260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 3324178 - 3324229
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3324178 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaaaaaaa 3324229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 5166427 - 5166376
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5166427 cggtcaaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 5166376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 24926005 - 24926059
Alignment:
Q  163 taaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  24926005 taaaagctacttttaaacaaagttaaaataaagctctttaagaaaaaggctaaag 24926059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 35423939 - 35423894
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaa 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  35423939 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaa 35423894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 1118136 - 1118080
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||    
T  1118136 tctaaaagctactttaaaacaaagttaaaataaaactctttaaggaaaaagctaaag 1118080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 18166749 - 18166808
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||| ||||| |||||||    
T  18166749 cggtctaaaagttactttaaaacaaagttaaaataaagttctttaaaaaaaaggctaaag 18166808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 36078481 - 36078527
Alignment:
Q  163 taaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  36078481 taaaagctactttaaaacaaagttaaaataaagctctttaaaaaaaa 36078527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 41452974 - 41452912
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||    
T  41452974 cggtcttaaagctactttaaaacaaagttaaaataaaactctttaaggaaaaagttaaagttg 41452912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 9799239 - 9799286
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaa 207  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||    
T  9799239 gtctaaaagctactttaaaacaaagataaaataaagctctttgagaaa 9799286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 10120770 - 10120719
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||| ||||    
T  10120770 cggtctaaaagctactttaaaacaaaattaaaataaaactctttaaggaaaa 10120719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 35287226 - 35287285
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||| ||||||||||||||||||||||||||  |||||||||| |  |||||||||    
T  35287226 tctaaaagttactttaaaacaaagttaaaataaaggcctttaagaaagaaactaaagttg 35287285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 2180178 - 2180116
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||| |||| | ||||||||    
T  2180178 cggtctaaaaactactataaaataaatttaaaataaagctctttaaggaaaaagttaaagttg 2180116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 13549490 - 13549552
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||  || |||||||||||||||||||||| ||||||||| |||| | ||||||||    
T  13549490 cggtctaaaaattattttaaaacaaagttaaaataaaactctttaaggaaaaagttaaagttg 13549552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 38879291 - 38879233
Alignment:
Q  162 ctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||||||||| ||||||||||||||| |||| ||| |||| | ||||||||    
T  38879291 ctaaaagctactttaaaataaagttaaaataaagttcttaaaggaaaaagttaaagttg 38879233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 20641972 - 20642031
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||| ||||||||||| |||| |||||| |||| | ||||||||    
T  20641972 gtctaaaagctactttaaaac-aagttaaaatacagctatttaaggaaaaagttaaagttg 20642031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 45474870 - 45474831
Alignment:
Q  170 tactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  45474870 tactttaaaataaagttaaaataaagctctttaaggaaaa 45474831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 32292345 - 32292307
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagc 196  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  32292345 cggtcttaaagttactttaaaacaaagttaaaataaagc 32292307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 7e-27; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 130 - 220
Target Start/End: Complemental strand, 9575049 - 9574959
Alignment:
Q  130 taaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||| |||||       |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9575049 taaggtaccgtttggccaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaagttg 9574959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 209
Target Start/End: Original strand, 43120665 - 43120744
Alignment:
Q  130 taaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43120665 taaggtaccgtttggtcaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 43120744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 40432083 - 40432164
Alignment:
Q  128 actaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||| |||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40432083 actaaggtaccgtttggccaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 40432164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 7833705 - 7833646
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7833705 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 7833646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 217
Target Start/End: Complemental strand, 17585703 - 17585616
Alignment:
Q  130 taaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||| |||||       ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  17585703 taaggtaccgtttggccaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaaactctttaagaaaaaggctaaag 17585616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 38802464 - 38802406
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  38802464 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 38802406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 39326959 - 39327021
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  39326959 cggtctaaaagctactttaaaataaagttaaaataaagctctttaagaaaaaggctaaagttg 39327021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 11754146 - 11754202
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11754146 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 11754202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 33642800 - 33642719
Alignment:
Q  128 actaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||| |||||||||||| |||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33642800 actagggtaccgtttggccaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 33642719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 41901588 - 41901665
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||| |||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41901588 aggtaccgtttggccaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 41901665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 25659724 - 25659775
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25659724 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 25659775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 33895131 - 33895182
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33895131 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 33895182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 46588007 - 46588066
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  46588007 cggtctaaaagctactctaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 46588066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 209
Target Start/End: Original strand, 33373707 - 33373786
Alignment:
Q  130 taaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||| |||||       |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33373707 taaggtaccgtttggccaggctttttttcggtctaaaaactactttaaaacaaagttaaaataaagctctttaagaaaaa 33373786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 33818010 - 33818072
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||    
T  33818010 cggtctaaaagctattttaaaacaaagttaaaataaagctctttaagaaaaagactaaagttg 33818072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 33877478 - 33877540
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||    
T  33877478 cggtctaaaagctattttaaaacaaagttaaaataaagctctttaagaaaaagactaaagttg 33877540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 31215782 - 31215838
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  31215782 tctaaaagctactttaaaacaaagttaaaataaagctctttaagacaaaggctaaag 31215838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 31221537 - 31221593
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  31221537 tctaaaagctactttaaaacaaagttaaaataaagctctttaagacaaaggctaaag 31221593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 3265276 - 3265217
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||    
T  3265276 cggtctaaaagctactctaaaacaaagttaaaataaagttctttaagaaaaaggctaaag 3265217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 14487239 - 14487298
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  14487239 cggtttaaaagctactttaaaataaagttaaaataaagctctttaagaaaaaggctaaag 14487298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 17249195 - 17249136
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  17249195 cggtgtaaaagctactttaaaacaaagttaaaataaagccctttaagaaaaaggctaaag 17249136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 33831845 - 33831896
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33831845 cggtctaaaatctactttaaaacaaagttaaaataaagctctttaagaaaaa 33831896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 33894008 - 33894059
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33894008 cggtctaaaatctactttaaaacaaagttaaaataaagctctttaagaaaaa 33894059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 45104337 - 45104278
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||    
T  45104337 tctaaaagctacttttaaacaaagttaaaataaagctctttaagaaaaaggttaaagttg 45104278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 17366271 - 17366320
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17366271 gtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaa 17366320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 36165435 - 36165496
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  36165435 ggtctaaaagctattttaaaataaagttaaaataaagctttttaagaaaaaggctaaagttg 36165496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 11583340 - 11583264
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||| |||||       |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11583340 aggtaccgtttggccaggctttttttcggtctaaaagctactttaaaacaaa-ttaaaataaagctctttaagaaaaa 11583264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 31638331 - 31638390
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||| |||| |||||||    
T  31638331 cggtcttaaagctactttaaaacaaagataaaataaagctctttaaggaaaaagctaaag 31638390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 33933072 - 33933013
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||| | ||||||||    
T  33933072 tctaaaagctactttaaaacaaagttaaaataaagttctttaaggaaaaagttaaagttg 33933013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 47037045 - 47037095
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  47037045 cggtctaaaagctactttaaaacaaagttaaaataaagct-tttaagaaaaa 47037095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 16033008 - 16033070
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||| ||||| |||||||||||||||||||| ||||||||||||| | ||||||||    
T  16033008 cggtctaaaagttacttcaaaacaaagttaaaataaaggtctttaagaaaaaagttaaagttg 16033070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 23730210 - 23730271
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| || | ||||||||||    
T  23730210 cggtctaaaagctactttaaa-caaagttaaaataaagctctttaaggaataagctaaagttg 23730271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 39729120 - 39729165
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaa 203  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  39729120 cggtctaaaagctactttaaaacaaaattaaaataaagctctttaa 39729165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 40648494 - 40648551
Alignment:
Q  163 taaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | ||||||||||    
T  40648494 taaaagctcctttaaaacaaagttcaaataaagctctttaagaaagaagctaaagttg 40648551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 44819821 - 44819870
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||    
T  44819821 gtctaaaagctactttaaaacaaagttaaaataaaggtatttaagaaaaa 44819870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 36952630 - 36952690
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||||||||||||||||||||||||||| |||||||  |||| | ||||||||    
T  36952630 gtctaaaagctactttaaaacaaagttaaaataaagttctttaaagaaaaagttaaagttg 36952690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 43119032 - 43119080
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  43119032 tctaaaagctactttaaaacaaaattaaaataaaactctttaagaaaaa 43119080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 46040405 - 46040453
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  46040405 tctaaaagctattttaaaacaaagttaaaataaagccctttaagaaaaa 46040453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 43123193 - 43123147
Alignment:
Q  163 taaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||    
T  43123193 taaaagctactttaaaacaaagttaaaataaagccctttaaaaaaaa 43123147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 16097502 - 16097457
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaaga 205  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||    
T  16097502 gtctaaaagctactttaaaacaaagttaaaataaagtcctttaaga 16097457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 18091436 - 18091375
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||| || ||||||||||||||||||||  |||||||||| | ||||||||||    
T  18091436 ggtctaaaagctagttcaaaacaaagttaaaataaaggcctttaagaaagaagctaaagttg 18091375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 45589773 - 45589724
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| ||||    
T  45589773 gtctaaaagttactttaaaacaaagttaaaataaagccctttaaggaaaa 45589724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 49571357 - 49571309
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||   |||||||||||||||||||||||||||    
T  49571357 cggtctaaaagctactttaaaa---agttaaaataaagctctttaagaaaaa 49571309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 5542163 - 5542103
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||| ||||| |||||||||||||||||||| ||| ||||||| | ||||||||||    
T  5542163 gtctaaaagttacttcaaaacaaagttaaaataaaggtctctaagaaagaagctaaagttg 5542103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 34652431 - 34652383
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaa 208  Q
    |||||||| ||||||||||||||||||||||||||| ||||||| ||||    
T  34652431 gtctaaaaactactttaaaacaaagttaaaataaagttctttaaaaaaa 34652383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 39879056 - 39879104
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaa 206  Q
    ||||||||||  ||||||||||||||||||||||||| |||||||||||    
T  39879056 cggtctaaaaattactttaaaacaaagttaaaataaaactctttaagaa 39879104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 43808879 - 43808835
Alignment:
Q  170 tactttaaaacaaagttaaaataaagctctttaagaaaaatgcta 214  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||    
T  43808879 tactttaaaacaaagttaaaataaaactctttaagaaaaaagcta 43808835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 12247685 - 12247744
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||| ||||||||||||||||||||||||||  |||||||||| |  |||||||||    
T  12247685 tctaaaagttactttaaaacaaagttaaaataaaggcctttaagaaagaaactaaagttg 12247744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 17670143 - 17670081
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||| ||||| ||||||||||||||||||||   ||||||||| | ||||||||||    
T  17670143 cggtctaaaagttacttcaaaacaaagttaaaataaagacatttaagaaagaagctaaagttg 17670081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 34078440 - 34078379
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||||  |||||||||||||||| |||||| ||||  |||||||||    
T  34078440 cggtctaaaagctactttaaaatgaagttaaaataaagct-tttaaggaaaaaactaaagttg 34078379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 28568671 - 28568720
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaa 207  Q
    ||||||||||| ||||| ||||||||||||||||||||  ||||||||||    
T  28568671 cggtctaaaagttacttcaaaacaaagttaaaataaaggcctttaagaaa 28568720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 11606385 - 11606440
Alignment:
Q  165 aaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||| ||||||||||||||  ||||||||||| | | ||||||||    
T  11606385 aaagctactttaaaataaagttaaaataaatgtctttaagaaataagttaaagttg 11606440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 36680085 - 36680038
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaga 205  Q
    ||||||||||| || || |||||||||||||||||||| |||||||||    
T  36680085 cggtctaaaagttaattcaaaacaaagttaaaataaaggtctttaaga 36680038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 44065358 - 44065407
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaa 207  Q
    |||||||||| | ||||||||||||||||||||| |||  ||||||||||    
T  44065358 cggtctaaaaacgactttaaaacaaagttaaaattaagggctttaagaaa 44065407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 49223307 - 49223258
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaa 207  Q
    ||||||||||| ||||| |||||||||||||||||||   ||||||||||    
T  49223307 cggtctaaaagttacttcaaaacaaagttaaaataaacgcctttaagaaa 49223258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 7265245 - 7265153
Alignment:
Q  128 actaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||| ||| |       |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7265245 actaaggtaccgtttggccagactttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaagctaaagttg 7265153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 29500519 - 29500442
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29500519 aggtaccgtttggtcaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 29500442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 45599151 - 45599232
Alignment:
Q  128 actaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||| |||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45599151 actaaggtaccgtttggccaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 45599232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 128 - 217
Target Start/End: Original strand, 54510272 - 54510361
Alignment:
Q  128 actaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||| ||| |       |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  54510272 actaaggtaccgtttggccagactttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 54510361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 22346994 - 22347053
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22346994 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 22347053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 48961276 - 48961217
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  48961276 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 48961217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 54741966 - 54741907
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  54741966 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 54741907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 26881780 - 26881718
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  26881780 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaagttaaagttg 26881718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 209
Target Start/End: Complemental strand, 52674970 - 52674891
Alignment:
Q  130 taaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||| |||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52674970 taaggtaccgtttggccaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 52674891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 19536897 - 19536807
Alignment:
Q  127 gactaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||| ||||||||||||||||||       |||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||    
T  19536897 gactatggtaccgtttggtcaggctttttttcggtctaaaagctaatttaaaacaaagttaaaataaagttctttaagaaaaaggctaaag 19536807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 4019107 - 4019026
Alignment:
Q  128 actaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||| ||| |       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4019107 actaaggtaccgtttggccagactttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 4019026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 7041071 - 7040990
Alignment:
Q  128 actaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||| |||||||||||| |||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7041071 actatggtaccgtttggccaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 7040990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 14587271 - 14587352
Alignment:
Q  128 actaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||| ||| |       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14587271 actaaggtaccgtttggccagactttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 14587352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 36592105 - 36592190
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||| |||||       ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  36592105 aggtaccgtttggccaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaaactctttaagaaaaaggctaaag 36592190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 53022852 - 53022775
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||| |       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53022852 aggtaccgtttggtcagactttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 53022775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 15496385 - 15496436
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15496385 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 15496436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 30268998 - 30269049
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30268998 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 30269049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 50739313 - 50739254
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  50739313 cggtctaaaagctactttaaaataaagttaaaataaagctctttaagaaaaaagctaaag 50739254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 50773542 - 50773601
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  50773542 cggtctaaaagctactttaaaataaagttaaaataaagctctttaagaaaaaagctaaag 50773601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 52461188 - 52461137
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52461188 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 52461137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 875926 - 875879
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaga 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  875926 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaga 875879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 12101377 - 12101428
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12101377 cggtctaaaagctactttaaaacaaagttaaaataaagccctttaagaaaaa 12101428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 36987654 - 36987705
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36987654 cggtctaaaaactactttaaaacaaagttaaaataaagctctttaagaaaaa 36987705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 37013093 - 37013144
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37013093 cggtctaaaaactactttaaaacaaagttaaaataaagctctttaagaaaaa 37013144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 48545270 - 48545219
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  48545270 cggtctaaaagctactttaaaacaaaattaaaataaagctctttaagaaaaa 48545219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 41990680 - 41990742
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||| | ||||||||    
T  41990680 cggtctaaaagctactttaaaacaaagttaaaataaagttctataagaaaaaagttaaagttg 41990742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 54203667 - 54203717
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  54203667 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaa 54203717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 47719641 - 47719592
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47719641 gtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaa 47719592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 29450817 - 29450769
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29450817 tctaaaagctactttaaaacaaagttaaaataaagttctttaagaaaaa 29450769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 33932402 - 33932453
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  33932402 cggtctaaaaactactctaaaacaaagttaaaataaagctctttaagaaaaa 33932453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 35529773 - 35529824
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  35529773 cggtctaaaagctactttaaaacaaagttaaaataaagccctttaaaaaaaa 35529824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 39721418 - 39721367
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  39721418 cggtctaaaaactactttaaaacaaagttaaaataaagctctttaaggaaaa 39721367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 46757720 - 46757669
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  46757720 cggtttaaaagctactttaaaacaaagttaaaataaagctttttaagaaaaa 46757669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 33899986 - 33899928
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaa 216  Q
    ||||||||||| |||||||||||||||||||||||||| | ||||||||||| ||||||    
T  33899986 cggtctaaaagttactttaaaacaaagttaaaataaagttttttaagaaaaaagctaaa 33899928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 37413724 - 37413670
Alignment:
Q  163 taaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||||||||||||||||  |||||||||||| |||||||    
T  37413724 taaaagctactttaaaacaaagttaaaataaagtcctttaagaaaaaagctaaag 37413670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 2909592 - 2909543
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  2909592 gtctaaaagctactttaaaacaaagttaaaataaagctcttcaaggaaaa 2909543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 54113577 - 54113520
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaa 215  Q
    |||||||||| |||||||||||||||||||||||||||  |||||||||||| |||||    
T  54113577 cggtctaaaaactactttaaaacaaagttaaaataaagtcctttaagaaaaaagctaa 54113520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 13450432 - 13450385
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13450432 tctaaaagctactttaaaacaaagttaaaa-aaagctctttaagaaaaa 13450385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 46850630 - 46850690
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||| | | ||||||||    
T  46850630 gtctaaaagctattttaaaacaaagttaaaataaaggtctttaagaaagaagttaaagttg 46850690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 34433455 - 34433506
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||  ||||||||||||    
T  34433455 cggtctaaaagctactttaaaacaaagtttaaataaagtcctttaagaaaaa 34433506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 42187665 - 42187724
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||| |||||||||||||||||||||||| ||||||||| |||||| ||||| |||||||    
T  42187665 cggtttaaaagctactttaaaacaaagtttaaataaagccctttaaaaaaaaggctaaag 42187724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 44541277 - 44541218
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||||||| | |||||||    
T  44541277 cggtctaaaagctcttttaaaacaaagttaaaataaagttctttaagaaagaagctaaag 44541218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 32754305 - 32754243
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||| ||||| ||||||||||||||||||||  |||||||||| | ||||||||||    
T  32754305 cggtctaaaagttacttcaaaacaaagttaaaataaaggcctttaagaaagaagctaaagttg 32754243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 52464882 - 52464943
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagtt 219  Q
    ||||||||||| ||||| ||||||||||||||||||||  |||||||||| | |||||||||    
T  52464882 cggtctaaaagttacttgaaaacaaagttaaaataaagacctttaagaaagaagctaaagtt 52464943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 54795955 - 54796016
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||| ||||| |||||||||||||||||||| ||||||||||| |  |||||||||    
T  54795955 ggtctaaaagttacttcaaaacaaagttaaaataaaggtctttaagaaagaatctaaagttg 54796016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 38361910 - 38361874
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaa 194  Q
    |||||||||||||||||||||||||||||||||||||    
T  38361910 cggtctaaaagctactttaaaacaaagttaaaataaa 38361874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 46090037 - 46090088
Alignment:
Q  163 taaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgcta 214  Q
    |||||||||||||||||||||||||||| ||||| ||||||| |||| ||||    
T  46090037 taaaagctactttaaaacaaagttaaaacaaagcgctttaaggaaaaagcta 46090088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 200
Target Start/End: Original strand, 35690122 - 35690164
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctt 200  Q
    ||||||||||| |||||||||||||||||||||||||| ||||    
T  35690122 cggtctaaaagttactttaaaacaaagttaaaataaagttctt 35690164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 46088635 - 46088697
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||| ||||||||||||||||| |||||||||||||||  ||| |||||||| | ||||||||    
T  46088635 cggtgtaaaagctactttaaaataaagttaaaataaagtccttcaagaaaaaagttaaagttg 46088697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 202
Target Start/End: Complemental strand, 10617768 - 10617736
Alignment:
Q  170 tactttaaaacaaagttaaaataaagctcttta 202  Q
    |||||||||||||||||||||||||||||||||    
T  10617768 tactttaaaacaaagttaaaataaagctcttta 10617736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 20849317 - 20849368
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||| |||||||||| |||||||||||||||  |||||| |||||    
T  20849317 cggtctaaaagttactttaaaaaaaagttaaaataaagtcctttaaaaaaaa 20849368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 47670453 - 47670512
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||| ||||||||||||||||||||||  | |||||| ||||  |||||||||    
T  47670453 tctaaaagctattttaaaacaaagttaaaataaaattttttaaggaaaaaactaaagttg 47670512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 194
Target Start/End: Complemental strand, 50933367 - 50933332
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaa 194  Q
    ||||||||||||||| ||||||||||||||||||||    
T  50933367 ggtctaaaagctactctaaaacaaagttaaaataaa 50933332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 12996731 - 12996772
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaag 204  Q
    ||||||||||| |||||||||  |||||||||||||||||||||    
T  12996731 tctaaaagctattttaaaaca--gttaaaataaagctctttaag 12996772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 20996251 - 20996295
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaa 203  Q
    |||||||||  |||||||||| |||||||||||||||| ||||||    
T  20996251 ggtctaaaaattactttaaaataaagttaaaataaagcactttaa 20996295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 42617672 - 42617712
Alignment:
Q  165 aaagctactttaaaacaaagttaaaataaagctctttaaga 205  Q
    |||||||||| ||||||||||||||||||||  ||||||||    
T  42617672 aaagctacttcaaaacaaagttaaaataaagtcctttaaga 42617712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 4431 - 4487
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4431 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 4487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 7610 - 7551
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7610 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 7551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 7e-24; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 16845212 - 16845127
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  16845212 aggtaccgtttggtcaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaagttctttaagaaaaaggctaaag 16845127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 17045895 - 17045975
Alignment:
Q  129 ctaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||| |||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17045895 ctaaggtaccgtttggccaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 17045975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 17313456 - 17313515
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17313456 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 17313515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 44908649 - 44908590
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44908649 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 44908590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 209
Target Start/End: Complemental strand, 7219565 - 7219486
Alignment:
Q  130 taaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||| |||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7219565 taaggtaccgtttggccaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 7219486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 14719051 - 14718966
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||| |||||       |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  14719051 aggtaccgtttggccaggctttttttcggtctaaaagctactttaaaataaagttaaaataaagctctttaagaaaaaggctaaag 14718966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 27467898 - 27467821
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||| |||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27467898 aggtaccgtttggccaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 27467821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 41361178 - 41361097
Alignment:
Q  128 actaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||| |||||||||||| |||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41361178 actatggtaccgtttggccaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 41361097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 34805949 - 34805898
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34805949 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 34805898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 43817879 - 43817930
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43817879 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 43817930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 38139471 - 38139409
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||    
T  38139471 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaaggtaaagttg 38139409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 39525610 - 39525548
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||    
T  39525610 cggtctaaaagctactttaaaacaaagttaaaataaagctctataagaaaaaagttaaagttg 39525548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 41526467 - 41526405
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  41526467 cggtctagaagctactttaaaacaaagttaaaataaagctctttaagaaaaaaactaaagttg 41526405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 11924926 - 11924867
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||    
T  11924926 cggtctaaaagctactttaaaacaaagttaaaataaaaccctttaagaaaaaagctaaag 11924867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 16239083 - 16239130
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaga 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16239083 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaga 16239130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 26518714 - 26518773
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||    
T  26518714 tctaaaagctactttaaaataaagttaagataaagctctttaagaaaaaggctaaagttg 26518773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 39998134 - 39998075
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  39998134 cggtctaaaagatactttaaaacaaagttaaaataaagctctataagaaaaaggctaaag 39998075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 38137634 - 38137696
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||    
T  38137634 cggtctaaaagctactttaaaacaaagttaaaataaaactctttaaggaaaaaggtaaagttg 38137696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 24511684 - 24511633
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  24511684 cggtttaaaagctactttaaaacaaagttaaaataaagatctttaagaaaaa 24511633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 39485942 - 39485993
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  39485942 cggtctaaaggctactttaaaacaaagttaaaataaagctctttaaggaaaa 39485993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 39685581 - 39685530
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  39685581 cggtctaaaagctattttaaaataaagttaaaataaagctctttaagaaaaa 39685530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 44655224 - 44655165
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||| |||| |||||||    
T  44655224 cggtcttaaagctactttaaaacaaagataaaataaagctctttaaggaaaaagctaaag 44655165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 42844457 - 42844411
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaag 204  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  42844457 cggtctaaaagctactttaaaacaaagttaaaataaagctttttaag 42844411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 45138971 - 45139017
Alignment:
Q  163 taaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  45138971 taaaagctactttaaaacaaagttaaaataaagctctttaaggaaaa 45139017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 37034984 - 37034923
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagtt 219  Q
    ||||||||||  ||||||||||||||||||||||| ||||||||||| |||| |||||||||    
T  37034984 cggtctaaaatttactttaaaacaaagttaaaatatagctctttaaggaaaaagctaaagtt 37034923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 39140716 - 39140765
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  39140716 gtctaaaagttactttaaaacaaagttaaaataaagttctttaagaaaaa 39140765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 6816189 - 6816141
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||    
T  6816189 tctaaaagctactttaaaacaaagttaaaataaagccctttaaaaaaaa 6816141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 42984142 - 42984086
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaa 216  Q
    |||||||| |||||||||||||||||| ||||||||||||||||| |||| ||||||    
T  42984142 gtctaaaaactactttaaaacaaagttgaaataaagctctttaaggaaaaagctaaa 42984086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 14449524 - 14449575
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||    
T  14449524 cggtctaaaagttactttaaaacaaagttaaaataaagctatttaaggaaaa 14449575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 36216466 - 36216554
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||| |||||       |||||||||||||||||||||| ||| ||||||||||| ||||||| ||||| | ||||||||    
T  36216466 aggtaccgtttggccaggctttttttcggtctaaaagctactttaaaaaaaaattaaaataaagttctttaaaaaaaaggttaaagttg 36216554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 44602854 - 44602904
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaa 208  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| |||||    
T  44602854 cggtctaaaaactattttaaaacaaagttaaaataaagctctttacgaaaa 44602904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 2184329 - 2184374
Alignment:
Q  164 aaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||    
T  2184329 aaaagctactttaaaataaagttaaaataaagctcattaagaaaaa 2184374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 11579350 - 11579305
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaa 203  Q
    ||||||||||||||||||||||||||||||||||||| || |||||    
T  11579350 cggtctaaaagctactttaaaacaaagttaaaataaacctttttaa 11579305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 45296702 - 45296763
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagtt 219  Q
    ||||||||||| ||||| ||||||||||||||||||||  |||||||||| | |||||||||    
T  45296702 cggtctaaaagttacttcaaaacaaagttaaaataaaggcctttaagaaagaagctaaagtt 45296763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 169620 - 169671
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||| |||||||||||||||  |||||| |||||    
T  169620 cggtctaaaagctactttaaaataaagttaaaataaagtcctttaaaaaaaa 169671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 2190558 - 2190609
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||| |||||||||||||||| ||||||||||||||||||  |||||||||    
T  2190558 cggtccaaaagctactttaaaataaagttaaaataaagctcaataagaaaaa 2190609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 22947644 - 22947703
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||| ||||||||||||||||||||||||||  |||||||||| |  |||||||||    
T  22947644 tctaaaagttactttaaaacaaagttaaaataaaggcctttaagaaagaaactaaagttg 22947703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 204
Target Start/End: Original strand, 33848630 - 33848669
Alignment:
Q  165 aaagctactttaaaacaaagttaaaataaagctctttaag 204  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  33848630 aaagctactttaaaacaaagttaaaataaagctccttaag 33848669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 35004412 - 35004353
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||| ||||||||||||||||||||||||||| | |||||| |||| | ||||||||    
T  35004412 tctaaaaactactttaaaacaaagttaaaataaagttatttaaggaaaaaggtaaagttg 35004353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 40048591 - 40048642
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||| ||||    
T  40048591 cggtctaaaagctattttaaaataaagttaaaataaagttctttaaggaaaa 40048642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 35916481 - 35916531
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||| ||| || ||||||||||||||||||||||||||||||||| ||||    
T  35916481 ggtctgaaaactgctttaaaacaaagttaaaataaagctctttaagcaaaa 35916531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 36059192 - 36059254
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||  |||| | ||||||||    
T  36059192 cggtataaaagctactttaaaacaaagttcaaataaagttctttaaagaaaaagttaaagttg 36059254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 12261387 - 12261436
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||| ||||    
T  12261387 gtctaaaaactactttaaaataaagttaaaataaagttctttaaggaaaa 12261436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 1877502 - 1877546
Alignment:
Q  165 aaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||| |||| |||||||||||||||||| |||||    
T  1877502 aaagctactttaaaataaagataaaataaagctctttaaaaaaaa 1877546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 41903044 - 41903106
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||||  |||||||||||| ||||||||||   ||||||||| | ||||||||||    
T  41903044 cggtctaaaagctcttttaaaacaaagataaaataaagtcttttaagaaagaagctaaagttg 41903106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 29868649 - 29868604
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaa 203  Q
    |||||||| ||||||||||||| |||||||||||||| | ||||||    
T  29868649 cggtctaatagctactttaaaataaagttaaaataaaaccctttaa 29868604  T

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Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 39201675 - 39201614
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||| ||||| ||||||||||||||||||||   ||||||||| | | ||||||||    
T  39201675 ggtctaaaagttacttcaaaacaaagttaaaataaaggcatttaagaaagaagataaagttg 39201614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 7e-24; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 25821377 - 25821317
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25821377 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaagttg 25821317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 3297740 - 3297799
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3297740 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 3297799  T

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Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 29383616 - 29383704
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||| |||||       |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  29383616 aggtaccgtttggccaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaaggtctttaagaaaaaggctaaagttg 29383704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 31939723 - 31939811
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||| |       |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  31939723 aggtaccgtttggtcagactttttttcggtctaaaagctactttaaaacaaagttaaaataaagttctttaagaaaaaggctaaagttg 31939811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 14205570 - 14205508
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  14205570 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaagttaaagttg 14205508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 24759138 - 24759080
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24759138 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 24759080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 127 - 209
Target Start/End: Original strand, 24027744 - 24027826
Alignment:
Q  127 gactaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||| ||| |       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24027744 gactaaggtaccgtttggccagactttttttcggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 24027826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 42323031 - 42322971
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  42323031 gtctaaaagctactttaaaacaaagttaaaataaagctctttgagaaaaaggctaaagttg 42322971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 4374769 - 4374820
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4374769 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 4374820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 26379403 - 26379315
Alignment:
Q  129 ctaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||| |       ||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  26379403 ctaaggtaccgtttggtcagacttttcttcggtctacaagctactttaaaacaaagttaaaataaagctctctaagaaaaaggctaaag 26379315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 665476 - 665538
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||    
T  665476 cggtctaaaagctactttaaaacaaatttaaaataaagctctttaagaaaaagactaaagttg 665538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 8314987 - 8314925
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||    
T  8314987 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaaactaaagttg 8314925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 32261632 - 32261689
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaa 216  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  32261632 ggtctaaaagctactttaaaacaaagttaaaataaagctctttcagaaaaaggctaaa 32261689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 217
Target Start/End: Original strand, 27176361 - 27176450
Alignment:
Q  128 actaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||| |||||||||||||||||       | ||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||    
T  27176361 actaaagtaccgtttggtcaggctttttttcagtctaaaaggtattttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 27176450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 30503448 - 30503508
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||    
T  30503448 gtctaaaagctactttaaaacaaagttaaaataaaactctttaagaaaaaagttaaagttg 30503508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 30543791 - 30543851
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||    
T  30543791 gtctaaaagctactttaaaacaaagttaaaataaaactctttaagaaaaaagttaaagttg 30543851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 42416955 - 42416895
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||    
T  42416955 gtctaaaagctactttaaaacaaagttaaaataaagccctttaagaaaaaagttaaagttg 42416895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 43396710 - 43396621
Alignment:
Q  128 actaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||| ||| |       |||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||    
T  43396710 actaaggtaccgtttggccagactttttttcggtctaaaaactactttaaaacaaagttaaaataaagctctttaaggaaaaagctaaag 43396621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 789977 - 790028
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  789977 cggtctaaaaggtactttaaaacaaagttaaaataaagctctttaagaaaaa 790028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 2475189 - 2475248
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  2475189 cggtctaaaaactactttaaaacaaagttaaaataaagttctttaagaaaaaggctaaag 2475248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 5589382 - 5589440
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  5589382 cggtctaaaagctactttaaaacaaagtt-aaataaagctctttaagaaaaaggctaaag 5589440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 7536800 - 7536741
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  7536800 tctaaaagctactttaaaacaaagttaaaataaagttctttaaggaaaaagctaaagttg 7536741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 10042954 - 10042903
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10042954 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaa 10042903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 16050689 - 16050748
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||    
T  16050689 cggtctaaaagctattttaaaacaaagttaaaataaagttctttaagaaaaaggctaaag 16050748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 29874584 - 29874643
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  29874584 cggtctaaaagctactttaaaacaaagtaaaaataaagttctttaagaaaaaagctaaag 29874643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 30503673 - 30503724
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30503673 cggtctaaaagcaactttaaaacaaagttaaaataaagctctttaagaaaaa 30503724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 30544016 - 30544067
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30544016 cggtctaaaagcaactttaaaacaaagttaaaataaagctctttaagaaaaa 30544067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 2530242 - 2530192
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2530242 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaa 2530192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 36088762 - 36088687
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaa 207  Q
    ||||| |||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36088762 aggtatcgtttggtcaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaagccctttaagaaa 36088687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 42110843 - 42110787
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  42110843 tctaaaagctactttaaaataaagttaaaataaagttctttaagaaaaaggctaaag 42110787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 15976640 - 15976581
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||  ||||||||||||||||||||||||||||||||| ||||| |||||||    
T  15976640 cggtctaaaagtcactttaaaacaaagttaaaataaagctctttaaaaaaaaggctaaag 15976581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 31884580 - 31884639
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||||||    
T  31884580 cggtctaaaagctactttaaaataaagttaaaataaaactctataagaaaaaggctaaag 31884639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 3246985 - 3246935
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  3246985 ggtctaaaagctactttaaaacaaagttaaaataaaactctttaaggaaaa 3246935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 28746235 - 28746285
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  28746235 ggtctaaaagttactttaaaacaaagttaaaataaagctctttaaggaaaa 28746285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 42111726 - 42111776
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  42111726 ggtctaaaagctactttaaaacaaagttaaaataaagttctttaaggaaaa 42111776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 15875673 - 15875726
Alignment:
Q  167 agctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  15875673 agctactttaaaacaaagttaaaataaaggtctttaagaaagaagctaaagttg 15875726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 19361805 - 19361747
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||| |||| |||||||    
T  19361805 cggtctaaaa-ctactttaaaacaaggttaaaataaagctctttaaggaaaaagctaaag 19361747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 3213148 - 3213210
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||| ||||| |||||||||||||||||||| ||||||||||| | | ||||||||    
T  3213148 cggtctaaaagttacttcaaaacaaagttaaaataaaggtctttaagaaagaagataaagttg 3213210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 16488044 - 16488094
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| ||||    
T  16488044 ggtctaaaagctactttaaaataaagttaaaataaagttctttaagtaaaa 16488094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 39783116 - 39783070
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaag 204  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||    
T  39783116 cggtttaaaagctactttaaaacaaagttaaaataaagttctttaag 39783070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 788943 - 788992
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  788943 gtctaaaagttactttaaaacaaacttaaaataaagctctttaaggaaaa 788992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 31958299 - 31958344
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaag 204  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||    
T  31958299 ggtctaaaaactactttaaaacaaagttaaaataaaactctttaag 31958344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 40506719 - 40506780
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| | |||| | ||||||||    
T  40506719 ggtctaaaagctattttaaaacaaagttaaaataaaactctttatggaaaaagttaaagttg 40506780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 36083948 - 36083892
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||  |||||||    
T  36083948 tctaaaaactactttaaaataaagttaaaataaagccctttaagaaaatggctaaag 36083892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 28887336 - 28887274
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||| ||||||||||||||||||||||||||   ||||||||| | ||| ||||||    
T  28887336 cggtctaaaagttactttaaaacaaagttaaaataaaggcatttaagaaagaagcttaagttg 28887274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 36514975 - 36515012
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaag 195  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  36514975 cggtctaaaagctcctttaaaacaaagttaaaataaag 36515012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 37147223 - 37147172
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||| |  |||||||||| | |||||||||||    
T  37147223 cggtctaaaagctactttaaaacagacataaaataaagttttttaagaaaaa 37147172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 28869500 - 28869438
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||| ||| ||||||||||| ||||||| |||  |||||||||||| | ||||||||    
T  28869500 cggtctaaaatctattttaaaacaaatttaaaattaagggctttaagaaaaaagttaaagttg 28869438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 2001639 - 2001594
Alignment:
Q  164 aaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||| ||||||||||||||||||||||||   |||||||||||    
T  2001639 aaaagctcctttaaaacaaagttaaaataaagtcttttaagaaaaa 2001594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 14720340 - 14720307
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaat 191  Q
    |||||||||| |||||||||||||||||||||||    
T  14720340 cggtctaaaaactactttaaaacaaagttaaaat 14720307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 18041105 - 18041166
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||| ||||| ||||||||||||||||| ||  |||||||||| | | ||||||||    
T  18041105 ggtctaaaagttacttcaaaacaaagttaaaatacaggcctttaagaaagaagttaaagttg 18041166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 7204 - 7263
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7204 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 7263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 18593525 - 18593584
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18593525 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 18593584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 28472380 - 28472319
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  28472380 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaagataaagttg 28472319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 29859569 - 29859508
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  29859569 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaagataaagttg 29859508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 3850414 - 3850325
Alignment:
Q  128 actaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||| |||||       |||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  3850414 actaaggtaccgtttggccaggctttttttcggtgtaaaagctactttcaaacaaagttaaaataaagctctttaagaaaaaggctaaag 3850325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 32244562 - 32244477
Alignment:
Q  131 aaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaa 216  Q
    |||||||||||||||||| |       |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  32244562 aaggtaccgtttggtcagactttttttcggtctaaaagctactttaaaataaagttaaaataaagctctttaagaaaaaggctaaa 32244477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 559912 - 559824
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||| |||||       ||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  559912 aggtaccgtttggccaggctttttttcggtctaaaagttactttaaaacaaagttaaaataaagctctttaagaaaaaggttaaagttg 559824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 7541263 - 7541204
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  7541263 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaagctaaag 7541204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 17505645 - 17505594
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17505645 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 17505594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 217
Target Start/End: Original strand, 24046450 - 24046537
Alignment:
Q  130 taaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||||| |       ||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||    
T  24046450 taaggtaccgtttggtcagactttttttcggtctaaaagctactttaaaacaaagttaaaataaaactatttaagaaaaaggctaaag 24046537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 34206927 - 34206978
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34206927 cggtctaaaagctactttaaaacaaagttaaaataaagctttttaagaaaaa 34206978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 10943067 - 10943123
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaa 216  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||    
T  10943067 gtctaaaatctactttaaaacaaagttaaaataaagctctttaaggaaaaagctaaa 10943123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 20791731 - 20791654
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||| |||||       ||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  20791731 aggtaccgtttggccaggctttttttcggtctaaaaaatactttaaaacaaagttaaaataaagctctttaagaaaaa 20791654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 19989048 - 19988997
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  19989048 cggtctaaaatctactttaaaacaaagttaaaataaagctcttttagaaaaa 19988997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 34247671 - 34247722
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  34247671 cggtctaaaagctactttaaaacaaagttaaaataaagttctttaaggaaaa 34247722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 6018490 - 6018540
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  6018490 ggtctaaaagttactttaaaacaaagttaaaataaagctctttaaggaaaa 6018540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 5414482 - 5414539
Alignment:
Q  163 taaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||| |||||||||||||||||||||| ||||||||| |||| ||||||||||    
T  5414482 taaaagctattttaaaacaaagttaaaataaaactctttaaggaaaaagctaaagttg 5414539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 29977816 - 29977722
Alignment:
Q  126 agactaaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||| ||||||||||| |       |||||||||| ||| |||||||||||||| ||||||||||||||||| |||| | ||||||||    
T  29977816 agactaaggtatcgtttggtcagactttttttcggtctaaaaactattttaaaacaaagtttaaataaagctctttaaggaaaaagttaaagttg 29977722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 33945738 - 33945786
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||    
T  33945738 tctaaaagatactttaaaacaaagttaaaataaagctttttaagaaaaa 33945786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 172967 - 173018
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  172967 cggtctaaaaactactttaaaacaaagttaaaataaaactctttaaggaaaa 173018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 29043358 - 29043307
Alignment:
Q  165 aaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaa 216  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| ||||||    
T  29043358 aaagctactttaaaacaaagttaaaatagagctctttaaggaaaaagctaaa 29043307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 33976156 - 33976094
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||| ||||| ||||||||||||||||||||   ||||||||| | ||||||||||    
T  33976156 cggtctaaaagttacttcaaaacaaagttaaaataaaggcttttaagaaagaagctaaagttg 33976094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 10945864 - 10945815
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||  |||||||||||||||||||||||||| |||||||| ||||    
T  10945864 gtctaaaatttactttaaaacaaagttaaaataaagttctttaaggaaaa 10945815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 28231003 - 28231063
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||  ||||| ||||||||||||||||||||  |||||||||| | ||||||||||    
T  28231003 gtctaaaaattacttcaaaacaaagttaaaataaaggcctttaagaaagaagctaaagttg 28231063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 195
Target Start/End: Complemental strand, 24162948 - 24162914
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaag 195  Q
    ||||||| |||||||||||||||||||||||||||    
T  24162948 tctaaaaactactttaaaacaaagttaaaataaag 24162914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 1632 - 1574
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1632 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 1574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 132817 - 132759
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  132817 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaagctaaag 132759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 4407957 - 4408015
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4407957 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaagctaaag 4408015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 12908069 - 12908018
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12908069 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 12908018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 37669184 - 37669243
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37669184 cggtctaaaaactactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 37669243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 38045815 - 38045756
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  38045815 cggtctaaaaactactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 38045756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 40239811 - 40239862
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40239811 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 40239862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 43156349 - 43156298
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43156349 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 43156298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 4399981 - 4400043
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||    
T  4399981 cggtctaaaagctactttaaaacaaagttaaaataaagccctttaagaaaaaagttaaagttg 4400043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 4406541 - 4406603
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||    
T  4406541 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaagttaaagttg 4406603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 32960712 - 32960770
Alignment:
Q  159 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  32960712 ggtctaaaagctactttaaaacaaagttaaaataaaactctttaagaaaaaggctaaag 32960770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 41343235 - 41343297
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  41343235 cggtctaaaaactactttaaaacaaagttaaaataaagctctttaaggaaaaagctaaagttg 41343297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 18956216 - 18956265
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18956216 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 18956265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 220
Target Start/End: Original strand, 23639302 - 23639392
Alignment:
Q  130 taaggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||||||||||||        || ||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  23639302 taaggtaccgtttggtcaggttttttttcgatctaagagctactttaaaacaaagttaaaataaagttctttaagaaaaaggctaaagttg 23639392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 10999297 - 10999220
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||| |||||       ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10999297 aggtaccgtttggccaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaaactctttaagaaaaa 10999220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 20135005 - 20135061
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  20135005 tctaaaagctactttaaaacaaagttaaaataaagccctttaagaaaaaagctaaag 20135061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 27031149 - 27031201
Alignment:
Q  165 aaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27031149 aaagctactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaag 27031201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 16933401 - 16933452
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16933401 cggtctaaaagctattttaaaacaaagttaaaataaagctctttaagaaaaa 16933452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 16938784 - 16938835
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16938784 cggtctaaaagctattttaaaacaaagttaaaataaagctctttaagaaaaa 16938835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 17278314 - 17278263
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17278314 cggtctaaaagctactttaaaacaaagttgaaataaagctctttaagaaaaa 17278263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 29448631 - 29448682
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29448631 cggtctaaaagctactttaaaacaaagttaaaataaagttctttaagaaaaa 29448682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 43111175 - 43111116
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||    
T  43111175 cggtctaaaagctacttcaaaacaaaattaaaataaagctctttaagaaaaaggctaaag 43111116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 4492356 - 4492402
Alignment:
Q  163 taaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  4492356 taaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 4492402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 40035944 - 40035995
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  40035944 cggtctaaaagctactttaaaataaagttaaaataaaactctttaagaaaaa 40035995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 40789337 - 40789286
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  40789337 cggtctaaaagcaactttaaaacaaagttaaaataaagttctttaagaaaaa 40789286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 44651793 - 44651844
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  44651793 cggtctaaaagttactttaaaacaaagttaaaataaagccctttaagaaaaa 44651844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 36765734 - 36765672
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||||  |||||||||    
T  36765734 cggtctaaaagctattttaaaacaaagttaaaataaagttctttaaggaaaaaactaaagttg 36765672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 41427120 - 41427070
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  41427120 cggtctaaaagctactttaaaacaaagttaaaataaa-ttctttaagaaaaa 41427070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 38049152 - 38049214
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||| ||||| ||| ||||||||||||||||||||||||||||||||||| | | ||||||||    
T  38049152 cggtataaaacctaatttaaaacaaagttaaaataaagctctttaagaaagaagttaaagttg 38049214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 42828799 - 42828861
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||| ||||| |||||||||||||||||||| ||||||||||| | | ||||||||    
T  42828799 cggtctaaaagttacttcaaaacaaagttaaaataaaggtctttaagaaagaagttaaagttg 42828861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 47171796 - 47171734
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||| ||||| ||||||||||||||||||||  |||||||||| | ||||||||||    
T  47171796 cggtctaaaagttacttcaaaacaaagttaaaataaagacctttaagaaagaagctaaagttg 47171734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 214
Target Start/End: Complemental strand, 1448284 - 1448202
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgcta 214  Q
    ||||||||||||| |||||       |||| ||||||||| |||||||||||||||||||||| |||||| ||||||| ||||    
T  1448284 aggtaccgtttggccaggctttttttcggtttaaaagctattttaaaacaaagttaaaataaatctctttcagaaaaaggcta 1448202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 4404447 - 4404398
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||||||||| | |||||| ||||    
T  4404447 gtctaaaagctactttaaaacaaagttaaaataaagttatttaaggaaaa 4404398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 5483562 - 5483513
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||| ||||    
T  5483562 gtctaaaagctactttaaaacaaagttaaaataaaactcttaaaggaaaa 5483513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 23154789 - 23154740
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||||||||| | |||||| ||||    
T  23154789 gtctaaaagctactttaaaacaaagttaaaataaagttatttaaggaaaa 23154740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 36769381 - 36769322
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||| ||||||||||||||||||||||||| |||||| ||||  |||||||||    
T  36769381 gtctaaaagctattttaaaacaaagttaaaataaagct-tttaaggaaaaaactaaagttg 36769322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 4616218 - 4616167
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||  |||||||||||||| ||||||||||||||||||| |||||    
T  4616218 cggtctaaaaaatactttaaaacaaaattaaaataaagctctttaaaaaaaa 4616167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 42915506 - 42915451
Alignment:
Q  164 aaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagtt 219  Q
    ||||| ||||| |||||||||||||||||||| ||||||||||| | |||||||||    
T  42915506 aaaagttacttcaaaacaaagttaaaataaaggtctttaagaaagaagctaaagtt 42915451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 37143584 - 37143542
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaa 203  Q
    ||||||||||||||||||| |||||||||||||| ||||||||    
T  37143584 tctaaaagctactttaaaataaagttaaaataaaactctttaa 37143542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 3840169 - 3840112
Alignment:
Q  163 taaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||||||||||||||||||||||||||||||   ||||||||| | | ||||||||    
T  3840169 taaaagctactttaaaacaaagttaaaataaagaattttaagaaagaagttaaagttg 3840112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 194
Target Start/End: Complemental strand, 5526259 - 5526226
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaa 194  Q
    ||||||||||||||||||||||||||||||||||    
T  5526259 tctaaaagctactttaaaacaaagttaaaataaa 5526226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 15641275 - 15641226
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaa 207  Q
    |||||||||||||| ||||| ||||||||| ||||||| |||||||||||    
T  15641275 cggtctaaaagctattttaatacaaagttacaataaagttctttaagaaa 15641226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 20482435 - 20482382
Alignment:
Q  164 aaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||||||||||||||||||||||   |||||| |||| |||||||    
T  20482435 aaaagctactttaaaacaaagttaaaataaaggcatttaaggaaaaagctaaag 20482382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 47840881 - 47840825
Alignment:
Q  164 aaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||| ||||||||| ||||||||||||||||||| |||||| ||||  |||||||||    
T  47840881 aaaaactactttaagacaaagttaaaataaagctatttaaggaaaaaactaaagttg 47840825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 4490953 - 4491015
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||  ||||| ||||||||||||||||||||  |||||||||| |  |||||||||    
T  4490953 cggtctaaaaattacttcaaaacaaagttaaaataaaggcctttaagaaagaaactaaagttg 4491015  T

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Target: scaffold0197 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 25895 - 25810
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||||| |||||       ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  25895 aggtaccgtttggccaggctttttttcggtctaaaagctactttaaaacaaagttaaaataaaactctttaagaaaaaggctaaag 25810  T

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Target: scaffold1793 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1793
Description:

Target: scaffold1793; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 182 - 241
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||    
T  182 cggtctaaaagttactttaaaacaaagttaaaataaagctctttaagaaagaagctaaag 241  T

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Target: scaffold0198 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 15174 - 15225
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  15174 cggtctaaaagctactttaaaacaaagttaaaataaagctttttaaaaaaaa 15225  T

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Target: scaffold1822 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1822
Description:

Target: scaffold1822; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 402 - 353
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaa 207  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  402 cggtctaaaagttactttaaaacaaagttaaaataaaactctttaagaaa 353  T

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Target: scaffold0027 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 137918 - 137995
Alignment:
Q  132 aggtaccgtttggtcaggcnnnnnnncggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaa 209  Q
    ||||||||||||||||| |       ||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  137918 aggtaccgtttggtcagactttttttcggtctaaaaattactttaaaacaaagttaaaataaagctctttaaggaaaa 137995  T

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Target: scaffold0024 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 90374 - 90433
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||||||||||||||||||||||||||||||||||||   |||||| ||||| |||||||    
T  90374 cggtctaaaagctactttaaaacaaagttaaaataaaatcctttaaaaaaaaggctaaag 90433  T

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Target: scaffold0024; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 110442 - 110501
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaag 217  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||  |||| |||||||    
T  110442 cggtttaaaagctactttaaaacaaagttaaaataaagttctttaacgaaaaagctaaag 110501  T

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Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 229241 - 229183
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaa 216  Q
    ||||||||||||| ||||||||||||||||||||||||  |||||||||| | ||||||    
T  229241 cggtctaaaagctcctttaaaacaaagttaaaataaagtcctttaagaaagaagctaaa 229183  T

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Target: scaffold0244 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 7493 - 7552
Alignment:
Q  161 tctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||| |||||||||||||||||||||||  || |||||||||  |||||||||    
T  7493 tctaaaagctattttaaaacaaagttaaaataaagtcctataagaaaaaaactaaagttg 7552  T

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Target: scaffold0016 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 99537 - 99475
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||||| || || |||||||||||||||||||| ||||||||||  | ||||||||||    
T  99537 cggtctaaaagttatttcaaaacaaagttaaaataaaggtctttaagaatgaagctaaagttg 99475  T

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Target: scaffold0010 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 50402 - 50340
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||| |||| ||||| ||||||||||||||||||||  |||||||||| | ||||||||||    
T  50402 cggtcttaaagttacttcaaaacaaagttaaaataaaggcctttaagaaagaagctaaagttg 50340  T

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Target: scaffold0010; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 57935 - 57873
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    |||||| |||| ||||| ||||||||||||||||||||  |||||||||| | ||||||||||    
T  57935 cggtcttaaagttacttcaaaacaaagttaaaataaaggcctttaagaaagaagctaaagttg 57873  T

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Target: scaffold0038 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 31500 - 31560
Alignment:
Q  160 gtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||||||  ||||| ||||||||||||||||||||  |||||||||| | ||||||||||    
T  31500 gtctaaaaattacttcaaaacaaagttaaaataaaggcctttaagaaagaagctaaagttg 31560  T

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Target: scaffold0318 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 1211 - 1174
Alignment:
Q  158 cggtctaaaagctactttaaaacaaagttaaaataaag 195  Q
    |||||||||||||  |||||||||||||||||||||||    
T  1211 cggtctaaaagctcttttaaaacaaagttaaaataaag 1174  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 156492 - 156548
Alignment:
Q  164 aaaagctactttaaaacaaagttaaaataaagctctttaagaaaaatgctaaagttg 220  Q
    ||||| ||||| ||||||||||||||||||||  |||||||||| |  |||||||||    
T  156492 aaaagttacttcaaaacaaagttaaaataaaggcctttaagaaataatctaaagttg 156548  T

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