View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21046_high_6 (Length: 265)

Name: NF21046_high_6
Description: NF21046
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21046_high_6
NF21046_high_6
[»] chr3 (38 HSPs)
chr3 (28-117)||(44162403-44162492)
chr3 (28-123)||(44252354-44252449)
chr3 (28-118)||(6738752-6738842)
chr3 (28-117)||(39728301-39728390)
chr3 (28-117)||(20086634-20086723)
chr3 (28-121)||(23547358-23547451)
chr3 (28-117)||(39655643-39655732)
chr3 (28-117)||(44107179-44107268)
chr3 (28-114)||(31127175-31127261)
chr3 (28-117)||(7470158-7470246)
chr3 (28-117)||(44638894-44638983)
chr3 (144-250)||(20964754-20964860)
chr3 (28-117)||(30616684-30616773)
chr3 (33-118)||(34025577-34025662)
chr3 (28-117)||(34154035-34154124)
chr3 (32-117)||(49579683-49579768)
chr3 (28-119)||(48391190-48391281)
chr3 (28-117)||(29283955-29284043)
chr3 (32-117)||(48306920-48307005)
chr3 (28-112)||(17146530-17146611)
chr3 (28-117)||(4016413-4016502)
chr3 (28-117)||(23154387-23154476)
chr3 (32-117)||(41937433-41937518)
chr3 (28-117)||(42758019-42758108)
chr3 (28-85)||(49025333-49025390)
chr3 (202-250)||(10083224-10083272)
chr3 (202-250)||(10190149-10190197)
chr3 (126-211)||(10190624-10190711)
chr3 (28-113)||(10043627-10043712)
chr3 (28-113)||(55439059-55439144)
chr3 (126-211)||(10083699-10083786)
chr3 (43-119)||(23580445-23580520)
chr3 (30-73)||(52572277-52572320)
chr3 (56-117)||(7019604-7019665)
chr3 (44-114)||(19111358-19111428)
chr3 (28-77)||(4557685-4557734)
chr3 (45-118)||(29858579-29858652)
chr3 (32-85)||(52197803-52197856)
[»] chr1 (41 HSPs)
chr1 (28-117)||(23966477-23966566)
chr1 (28-117)||(20774251-20774340)
chr1 (28-117)||(34610693-34610782)
chr1 (28-119)||(5180668-5180759)
chr1 (28-117)||(40087838-40087927)
chr1 (28-116)||(23493705-23493793)
chr1 (28-115)||(44792626-44792713)
chr1 (28-117)||(13390074-13390163)
chr1 (28-117)||(28297552-28297641)
chr1 (28-117)||(36187602-36187691)
chr1 (28-115)||(44615856-44615943)
chr1 (28-117)||(18354451-18354540)
chr1 (28-120)||(42440015-42440107)
chr1 (31-117)||(24710477-24710563)
chr1 (31-117)||(45866569-45866655)
chr1 (28-117)||(49251112-49251201)
chr1 (28-117)||(50427034-50427123)
chr1 (32-117)||(51421514-51421599)
chr1 (28-116)||(34673639-34673727)
chr1 (28-117)||(9983266-9983355)
chr1 (32-117)||(14892325-14892410)
chr1 (32-117)||(17092344-17092429)
chr1 (28-117)||(29936036-29936125)
chr1 (28-117)||(3628355-3628444)
chr1 (28-117)||(8880010-8880099)
chr1 (28-117)||(32594515-32594604)
chr1 (45-117)||(34060411-34060483)
chr1 (30-117)||(38686272-38686359)
chr1 (28-86)||(24237141-24237199)
chr1 (32-77)||(17134606-17134651)
chr1 (28-117)||(19892571-19892659)
chr1 (55-119)||(2514273-2514337)
chr1 (61-117)||(14890754-14890810)
chr1 (43-119)||(35937212-35937287)
chr1 (28-111)||(16903129-16903212)
chr1 (36-117)||(16433549-16433630)
chr1 (73-114)||(19572925-19572966)
chr1 (28-117)||(25180761-25180850)
chr1 (32-117)||(39218825-39218910)
chr1 (44-117)||(39615921-39615994)
chr1 (45-114)||(41479574-41479643)
[»] chr6 (22 HSPs)
chr6 (28-115)||(33061978-33062065)
chr6 (28-118)||(12141015-12141105)
chr6 (28-118)||(3484303-3484393)
chr6 (28-118)||(27534313-27534403)
chr6 (28-117)||(5863752-5863841)
chr6 (28-117)||(10188454-10188543)
chr6 (28-117)||(24225320-24225408)
chr6 (28-117)||(32052675-32052764)
chr6 (28-117)||(9442268-9442357)
chr6 (28-117)||(14505718-14505807)
chr6 (28-117)||(32853463-32853552)
chr6 (28-120)||(10142897-10142989)
chr6 (33-118)||(30815870-30815954)
chr6 (28-114)||(9402165-9402251)
chr6 (44-117)||(2366945-2367018)
chr6 (31-86)||(14032282-14032337)
chr6 (36-113)||(34179457-34179534)
chr6 (28-117)||(9458317-9458406)
chr6 (32-117)||(11762065-11762150)
chr6 (61-117)||(29342472-29342528)
chr6 (31-117)||(256936-257022)
chr6 (61-117)||(29340391-29340447)
[»] chr2 (33 HSPs)
chr2 (28-123)||(30846558-30846653)
chr2 (28-117)||(13830355-13830444)
chr2 (28-120)||(36128488-36128580)
chr2 (28-117)||(7315030-7315119)
chr2 (28-117)||(10208810-10208899)
chr2 (28-117)||(11009116-11009205)
chr2 (28-112)||(9632022-9632106)
chr2 (28-118)||(31942535-31942625)
chr2 (31-117)||(15546313-15546399)
chr2 (31-117)||(6028272-6028358)
chr2 (28-117)||(10920282-10920371)
chr2 (28-117)||(26755353-26755442)
chr2 (28-113)||(35248821-35248906)
chr2 (30-119)||(37999103-37999191)
chr2 (28-117)||(10212063-10212147)
chr2 (172-241)||(18592704-18592773)
chr2 (28-101)||(24414512-24414585)
chr2 (28-104)||(22900419-22900495)
chr2 (28-115)||(18106459-18106545)
chr2 (44-117)||(16227086-16227159)
chr2 (28-117)||(25209942-25210031)
chr2 (28-117)||(37473110-37473199)
chr2 (28-114)||(13705742-13705822)
chr2 (50-117)||(44746500-44746567)
chr2 (31-117)||(45256443-45256529)
chr2 (45-117)||(37319563-37319636)
chr2 (28-116)||(13954306-13954394)
chr2 (28-116)||(14095513-14095601)
chr2 (28-114)||(3546763-3546849)
chr2 (55-117)||(45115218-45115280)
chr2 (28-85)||(37106357-37106414)
chr2 (28-113)||(38342925-38343010)
chr2 (65-117)||(14331162-14331214)
[»] chr4 (44 HSPs)
chr4 (129-247)||(11866068-11866186)
chr4 (28-119)||(7608593-7608684)
chr4 (28-118)||(16217049-16217139)
chr4 (28-117)||(5902995-5903084)
chr4 (28-117)||(6382655-6382744)
chr4 (28-117)||(11123248-11123337)
chr4 (28-117)||(15987610-15987699)
chr4 (28-117)||(44887531-44887620)
chr4 (28-117)||(47550734-47550823)
chr4 (28-112)||(31918941-31919025)
chr4 (28-119)||(55827004-55827095)
chr4 (28-117)||(6482406-6482495)
chr4 (28-117)||(11027697-11027786)
chr4 (28-117)||(43892136-43892225)
chr4 (28-117)||(4766696-4766785)
chr4 (32-120)||(21423483-21423571)
chr4 (34-117)||(36918690-36918773)
chr4 (28-114)||(19534083-19534169)
chr4 (31-117)||(31752165-31752251)
chr4 (28-117)||(1724691-1724780)
chr4 (28-117)||(3737422-3737511)
chr4 (28-117)||(26564456-26564545)
chr4 (28-104)||(10286906-10286982)
chr4 (172-247)||(12379755-12379830)
chr4 (32-119)||(48459109-48459196)
chr4 (28-117)||(42299448-42299540)
chr4 (31-116)||(39046583-39046668)
chr4 (28-85)||(44317201-44317258)
chr4 (28-116)||(29755712-29755800)
chr4 (28-116)||(37348749-37348837)
chr4 (32-115)||(9229909-9229992)
chr4 (38-98)||(13770854-13770914)
chr4 (45-117)||(42774386-42774458)
chr4 (28-118)||(53906657-53906748)
chr4 (28-118)||(43309091-43309181)
chr4 (32-117)||(42907433-42907518)
chr4 (181-241)||(6096020-6096080)
chr4 (28-119)||(32596561-32596651)
chr4 (31-117)||(39374967-39375052)
chr4 (28-117)||(47239766-47239849)
chr4 (43-116)||(39772117-39772189)
chr4 (28-117)||(47103341-47103430)
chr4 (28-120)||(45275141-45275233)
chr4 (47-118)||(50509924-50509996)
[»] chr8 (31 HSPs)
chr8 (28-117)||(32302679-32302768)
chr8 (28-120)||(24927565-24927657)
chr8 (28-116)||(27932055-27932143)
chr8 (28-118)||(2076216-2076306)
chr8 (32-117)||(14185963-14186048)
chr8 (28-117)||(17220336-17220425)
chr8 (28-117)||(17468875-17468964)
chr8 (28-116)||(29109198-29109286)
chr8 (28-120)||(34301534-34301626)
chr8 (28-118)||(27058710-27058800)
chr8 (28-118)||(28977494-28977584)
chr8 (32-117)||(45235689-45235774)
chr8 (28-120)||(39445942-39446034)
chr8 (28-123)||(20399249-20399344)
chr8 (28-117)||(4231099-4231188)
chr8 (28-117)||(5858837-5858926)
chr8 (33-114)||(31323491-31323572)
chr8 (29-116)||(9434651-9434738)
chr8 (28-119)||(24870403-24870494)
chr8 (28-118)||(9642747-9642837)
chr8 (28-119)||(40248722-40248813)
chr8 (28-117)||(6388945-6389035)
chr8 (43-108)||(18151083-18151148)
chr8 (28-117)||(34776081-34776170)
chr8 (31-83)||(1063162-1063214)
chr8 (28-116)||(24568559-24568647)
chr8 (28-119)||(33633362-33633453)
chr8 (28-117)||(1012250-1012339)
chr8 (61-118)||(17084583-17084640)
chr8 (28-119)||(28345049-28345139)
chr8 (64-117)||(4033527-4033579)
[»] chr7 (43 HSPs)
chr7 (28-117)||(17851489-17851578)
chr7 (32-117)||(5567525-5567610)
chr7 (28-117)||(10072112-10072201)
chr7 (28-117)||(21702303-21702392)
chr7 (28-117)||(25980304-25980392)
chr7 (28-117)||(30650254-30650343)
chr7 (28-117)||(35074093-35074181)
chr7 (32-117)||(37578887-37578972)
chr7 (28-117)||(38140170-38140259)
chr7 (28-117)||(38152524-38152613)
chr7 (28-117)||(39316618-39316707)
chr7 (28-117)||(45886145-45886234)
chr7 (28-120)||(3227921-3228013)
chr7 (31-119)||(44986280-44986368)
chr7 (28-119)||(7779629-7779720)
chr7 (28-117)||(10996227-10996316)
chr7 (28-117)||(16865793-16865882)
chr7 (28-117)||(25905252-25905341)
chr7 (28-117)||(43507057-43507146)
chr7 (28-117)||(18826250-18826338)
chr7 (44-117)||(18125624-18125697)
chr7 (31-119)||(2632351-2632438)
chr7 (45-117)||(44658637-44658709)
chr7 (31-117)||(16075319-16075406)
chr7 (28-107)||(37196368-37196447)
chr7 (31-117)||(41103267-41103353)
chr7 (28-113)||(25783281-25783365)
chr7 (28-117)||(33840698-33840787)
chr7 (30-117)||(39456361-39456445)
chr7 (28-108)||(44734739-44734819)
chr7 (28-117)||(24425072-24425160)
chr7 (28-117)||(42908431-42908520)
chr7 (88-120)||(3920159-3920191)
chr7 (183-247)||(5298285-5298349)
chr7 (44-120)||(45709248-45709324)
chr7 (33-117)||(46127548-46127632)
chr7 (82-117)||(26068839-26068874)
chr7 (82-117)||(26093284-26093319)
chr7 (32-94)||(4101120-4101182)
chr7 (33-118)||(5376709-5376794)
chr7 (28-117)||(29292251-29292340)
chr7 (32-117)||(37181898-37181982)
chr7 (28-117)||(41741829-41741918)
[»] chr5 (35 HSPs)
chr5 (28-117)||(40517426-40517515)
chr5 (28-115)||(3565100-3565186)
chr5 (28-119)||(15889828-15889919)
chr5 (28-118)||(6156291-6156380)
chr5 (28-117)||(17853660-17853749)
chr5 (36-114)||(1218409-1218487)
chr5 (28-120)||(20973866-20973958)
chr5 (28-118)||(22695282-22695372)
chr5 (29-118)||(24207258-24207347)
chr5 (28-113)||(38006851-38006936)
chr5 (31-119)||(33862573-33862661)
chr5 (30-85)||(5909065-5909120)
chr5 (43-118)||(30996216-30996291)
chr5 (31-117)||(10126726-10126811)
chr5 (29-119)||(38972482-38972572)
chr5 (28-117)||(27088732-27088821)
chr5 (32-117)||(35311436-35311521)
chr5 (50-117)||(4582839-4582906)
chr5 (28-122)||(6093486-6093580)
chr5 (31-117)||(13402387-13402473)
chr5 (32-120)||(42987862-42987947)
chr5 (28-117)||(6369313-6369402)
chr5 (28-117)||(12447002-12447090)
chr5 (45-120)||(33420582-33420657)
chr5 (28-117)||(2413099-2413189)
chr5 (61-119)||(27900875-27900933)
chr5 (28-117)||(23045394-23045483)
chr5 (28-117)||(28045271-28045360)
chr5 (45-117)||(3572843-3572915)
chr5 (36-116)||(10822927-10823006)
chr5 (28-119)||(12235800-12235891)
chr5 (28-119)||(12866933-12867024)
chr5 (28-118)||(2680814-2680904)
chr5 (29-107)||(12457085-12457163)
chr5 (28-85)||(4920483-4920540)
[»] scaffold0014 (1 HSPs)
scaffold0014 (28-118)||(14524-14614)
[»] scaffold0189 (1 HSPs)
scaffold0189 (28-117)||(3877-3966)
[»] scaffold0036 (1 HSPs)
scaffold0036 (28-117)||(33014-33103)
[»] scaffold0095 (1 HSPs)
scaffold0095 (28-120)||(32904-32996)
[»] scaffold0007 (2 HSPs)
scaffold0007 (28-117)||(199173-199262)
scaffold0007 (31-78)||(199056-199103)
[»] scaffold0135 (1 HSPs)
scaffold0135 (32-115)||(35775-35858)
[»] scaffold0198 (1 HSPs)
scaffold0198 (62-119)||(3750-3807)
[»] scaffold1630 (1 HSPs)
scaffold1630 (28-117)||(1242-1331)
[»] scaffold0022 (1 HSPs)
scaffold0022 (28-117)||(90216-90305)
[»] scaffold0013 (2 HSPs)
scaffold0013 (67-118)||(128526-128577)
scaffold0013 (90-118)||(105942-105970)
[»] scaffold0059 (1 HSPs)
scaffold0059 (90-118)||(69682-69710)


Alignment Details
Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 44162492 - 44162403
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||    
T  44162492 atgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaactcgtccccaccccgccccattgccatgccta 44162403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 44252449 - 44252354
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctacttcaa 123  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||| | ||||||| || ||||||||| ||||||||||||||||||||||||    
T  44252449 atgggtagggtaacgggtaagtatatgagaatcgggtatggggacgggaaaggtaaaactcgtccccaccctgccccattgccatgcctacttcaa 44252354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 6738752 - 6738842
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||  | |||||||||||||||||||||||||||||    
T  6738752 atgggtagggtaatgggtaagtatatgagaatcgggtatgggaacggggaaggtaaaacccgtccccaccccgccccattgccatgcctac 6738842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 39728390 - 39728301
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||    
T  39728390 atgggtagggtaacaggtaagtatatgagaatcgggtatggggacggggaaggtaaaactcgtccccaccccgccccattgccatgccta 39728301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 20086723 - 20086634
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||  |||| ||||||||||||| |||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||    
T  20086723 atgggtagggtaactggtacgtatattagaatctggtatggggacggggaaggtaaaactcatccccacccagccccattgccatgccta 20086634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 121
Target Start/End: Original strand, 23547358 - 23547451
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctacttc 121  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||||||| | |||||  | ||||||||||||||||||||||||||||||||    
T  23547358 atgggtagggtaacggataagtatatgagaatcgggtatggggacggggaagataaaacccgtccccaccccgccccattgccatgcctacttc 23547451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 39655643 - 39655732
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||||||| |||||||  | ||||||||||||||||||||||||||||    
T  39655643 atgggtagggtaatgggtaagtatatgagaatcatgtatggggacggggaaggtaaaaaccgtccccaccccgccccattgccatgccta 39655732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 44107179 - 44107268
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| ||||||||||||| ||||||||| ||||||| || |||||||||||| |||||||||||||||    
T  44107179 atgggtagggtaacgggtaagtatatgagaatcgggtatgaggacggggaaggtaaaactcgtccccaccccgctccattgccatgccta 44107268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 31127175 - 31127261
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgc 114  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||  |||||| ||||||||||||||| || |||||||||    
T  31127175 atgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaatgtaaaactcatccccaccccgctccgttgccatgc 31127261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 7470158 - 7470246
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| |||||||||||||||||| |||| |||||||  | ||||||||||||||||||||||||||||    
T  7470158 atgggtagggtaacgggtaagtatatgagaatcgggtatggggac-gggaaggtaaaacccgtccccaccccgccccattgccatgccta 7470246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 44638983 - 44638894
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||  | ||||||||||||| ||||| ||||||||    
T  44638983 atgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccacattgtcatgccta 44638894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 250
Target Start/End: Complemental strand, 20964860 - 20964754
Alignment:
Q  144 gacataaatgcaatgcctttgtttttcctttcagacttatcactgatagccatttcaaaagtttgaagtgacccaataagttcttctactttcatgttct 243  Q
    |||| ||| ||||||| |||||||||| ||||||| | |||||| |||||||||||||| ||||||||||||||||| || ||||||||| |||||||      
T  20964860 gacaaaaaggcaatgcttttgtttttcttttcagattgatcactaatagccatttcaaaggtttgaagtgacccaattagctcttctactctcatgtttg 20964761  T
Q  244 taatatc 250  Q
    |||||||    
T  20964760 taatatc 20964754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 30616684 - 30616773
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||   |||||||||| ||||| ||||||||||| |||||||||||||  | ||||||||||||||||||||||||||||    
T  30616684 atgggtagggtaacaagtaagtatatgagaatagggtatggggatggggatggtaaaacccgtccccaccccgccccattgccatgccta 30616773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 34025662 - 34025577
Alignment:
Q  33 tagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    |||||||| |||||||||||| |||||| ||||||||||||| || |||||||| | ||||||| |||||||||||||||||||||    
T  34025662 tagggtaacgggtaagtatatgagaatcaggtatggggacggagaaggtaaaatccgtccccactccgccccattgccatgcctac 34025577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 34154124 - 34154035
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||||||| |||||||  | ||||||||||||||||||| ||||||||    
T  34154124 atgggtagggtaacgggtaagtatatgtgaatcgggtacggggacggggaaggtaaaacccgtccccaccccgccccattgtcatgccta 34154035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 49579768 - 49579683
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||| ||||||||| || |||||| |||||||||||||||| |||||||  | ||||||| ||||||||||||||||||||    
T  49579768 gtagggtaacgggtaagtacatgagaatcaggtatggggacggggaaggtaaaacccgtccccactccgccccattgccatgccta 49579683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 48391190 - 48391281
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    ||||||| |||||  ||||||||||| ||||||||  ||||||| ||||| |||||||  | ||||||||||||||||||||||||||||||    
T  48391190 atgggtaaggtaacaggtaagtatatgagaatcggacatggggatggggagggtaaaacccgtccccaccccgccccattgccatgcctact 48391281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 29284043 - 29283955
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||| |||||||| |||||||||||| ||||||||||||| |||||| || |||||||  | ||||||||||| ||||||||||||||||    
T  29284043 atggatagggtaacgggtaagtatatgagaatcgggtatgaggacggagaaggtaaaacccgtccccaccccg-cccattgccatgccta 29283955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 48306920 - 48307005
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||||| ||||| |||||||| ||||| |||||||| |||||||  | |||||||| | |||||||||||||||||    
T  48306920 gtagggtaatgggtaaatatataagaatcggatatggagacggggaaggtaaaacccgtccccaccacaccccattgccatgccta 48307005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 17146530 - 17146611
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccat 112  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||    ||||  | ||||||||||||| |||||||||    
T  17146530 atgggtagggtaacgggtaagtatatgagaatcgggtatggggacgggga---aaaaacccgtccccaccccgcctcattgccat 17146611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 4016413 - 4016502
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| || ||| ||||| |||||| ||||||||||||||||  | ||||  | ||||||||||||||||||| ||||||||    
T  4016413 atgggtagggtaacggataaatatataagaatctggtatggggacggggaatgcaaaacccgtccccaccccgccccattgtcatgccta 4016502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 23154387 - 23154476
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| || ||||||||| ||||||||||||  | ||||||| |||||||  | |||||||||| ||| |||||||||||||    
T  23154387 atgggtagggtaacggataagtatatgagaatcgggtataagaacggggaaggtaaaacccgtccccaccccaccctattgccatgccta 23154476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 41937433 - 41937518
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||  ||||| ||||| |||||||||||||| ||||||||  ||||||  | |||||||||| |||||||||||||||||    
T  41937433 gtagggtaacaggtaaatatatgagaatcgggtatggagacggggaatgtaaaacccgtccccaccccaccccattgccatgccta 41937518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 42758108 - 42758019
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| ||||||||||||||  | |||||  ||||||  | |||||||| |||||||||| ||||||||    
T  42758108 atgggtagggtaacgggtaagtatatgagaatcgggtatggaaatggggaatgtaaaacccgtccccacctcgccccattgtcatgccta 42758019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 49025390 - 49025333
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaa 85  Q
    ||||||||||||| |||||||||||| ||||||||||||| ||||||||| |||||||    
T  49025390 atgggtagggtaacgggtaagtatatgagaatcgggtatgaggacggggaaggtaaaa 49025333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 10083272 - 10083224
Alignment:
Q  202 aagtttgaagtgacccaataagttcttctactttcatgttcttaatatc 250  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  10083272 aagtttgaagtgactcaataagttcttcaactttcatgttcttaatatc 10083224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 10190197 - 10190149
Alignment:
Q  202 aagtttgaagtgacccaataagttcttctactttcatgttcttaatatc 250  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  10190197 aagtttgaagtgactcaataagttcttcaactttcatgttcttaatatc 10190149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 10190711 - 10190624
Alignment:
Q  126 tgatcattactggtgttggacataaatgcaatgcctttgtttttcc--tttcagacttatcactgatagccatttcaaaagtttgaag 211  Q
    ||||||| |||||| || |||| ||| |||| || ||||||||||   |||||||||||||||||||||||||||| |||||||||||    
T  10190711 tgatcatcactggtattagacacaaaagcaacgcttttgtttttctcttttcagacttatcactgatagccatttcgaaagtttgaag 10190624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 10043627 - 10043712
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatg 113  Q
    ||||||||||||| ||||||||||||  |||||||| ||||||| | ||| ||||||| || ||||||||  ||| ||||||||||    
T  10043627 atgggtagggtaacgggtaagtatatgggaatcggggatggggatgtggaaggtaaaactcgtccccaccgagccgcattgccatg 10043712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 55439059 - 55439144
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatg 113  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||| |||  ||||||  | |  ||||| |||||||||||||||    
T  55439059 atgggtagggtaacgggtaagtatatgagaatcggatatggggacgaggaatgtaaaacccgtatccacctcgccccattgccatg 55439144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 10083786 - 10083699
Alignment:
Q  126 tgatcattactggtgttggacataaatgcaatgcctttgtttttcc--tttcagacttatcactgatagccatttcaaaagtttgaag 211  Q
    ||||||| |||||| || |||| ||| |||| || ||||||||||   |||||||||||||||| ||||||||||| |||||||||||    
T  10083786 tgatcatcactggtattagacacaaaagcaacgcttttgtttttctcttttcagacttatcacttatagccatttcgaaagtttgaag 10083699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 23580520 - 23580445
Alignment:
Q  43 ggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    ||||||||||| |||||||||||||||||| |||| |||||||  | ||||||||||  || |||||||||||||||    
T  23580520 ggtaagtatatgagaatcgggtatggggac-gggaaggtaaaacccgtccccaccccatcctattgccatgcctact 23580445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 73
Target Start/End: Complemental strand, 52572320 - 52572277
Alignment:
Q  30 gggtagggtaatgggtaagtatattagaatcgggtatggggacg 73  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  52572320 gggtagggtaacgggtaagtatatgagaatcgggtatggggacg 52572277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 7019665 - 7019604
Alignment:
Q  56 gaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||| ||||||| | ||| |||||||||| ||| ||||||||||||||| ||||||||    
T  7019665 gaatcggggatggggatgaggaaggtaaaattcgtcctcaccccgccccattgtcatgccta 7019604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 19111428 - 19111358
Alignment:
Q  44 gtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgc 114  Q
    |||||||||| |||| |||||||||||||| |||  ||||||  | ||||| || ||||||||||||||||    
T  19111428 gtaagtatatgagaaccgggtatggggacgaggaatgtaaaacccgtcccctccacgccccattgccatgc 19111358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 4557685 - 4557734
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacgggga 77  Q
    |||| |||||||| |||||| ||||| ||||||||||||||||| |||||    
T  4557685 atggatagggtaacgggtaaatatatgagaatcgggtatggggatgggga 4557734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 29858579 - 29858652
Alignment:
Q  45 taagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    ||||||||| ||||||||||||||||| ||||| |||||||  | ||| || ||| ||||||||| ||| ||||    
T  29858579 taagtatatgagaatcgggtatggggatggggaaggtaaaacccgtccacatcccaccccattgctatgtctac 29858652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 52197856 - 52197803
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaa 85  Q
    |||| |||| |||||||||||| ||||||| |||||||||||| || |||||||    
T  52197856 gtagagtaacgggtaagtatatgagaatcgagtatggggacggagaaggtaaaa 52197803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 23966566 - 23966477
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| || ||||||||||||||||||||||||||||    
T  23966566 atgggtagggtaatgggtaagtatatgagaatcggttatggggacggggaaggtaaaactcgtccccaccccgccccattgccatgccta 23966477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 20774340 - 20774251
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||    
T  20774340 atgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 20774251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 34610782 - 34610693
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| | |||||||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  34610782 atgggtagggtaacgagtaagtatatgagaatcgggtatggggacggggaaggtaaaacccatccccaccccgccccattgccatgccta 34610693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 5180759 - 5180668
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||| || |||||||||| ||||||||| |||||||||    
T  5180759 atgggtagggtaatgggtaagtatatgagaatcgggtatagggacggggaaggtaaaactcgtccccaccccaccccattgcaatgcctact 5180668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 40087838 - 40087927
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||  | ||||||||||||||||||| ||||||||    
T  40087838 atgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccccattgtcatgccta 40087927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 23493705 - 23493793
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcct 116  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||  | |||||||||||||| ||||||||||||    
T  23493705 atgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccctattgccatgcct 23493793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 115
Target Start/End: Complemental strand, 44792713 - 44792626
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcc 115  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||  ||||||  | ||||||||||||||||||||||||||    
T  44792713 atgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaatgtaaaacccgtccccaccccgccccattgccatgcc 44792626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 13390163 - 13390074
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||||||| |||||||  | ||||||||||||||||||| ||||||||    
T  13390163 atgggtagggtaacggttaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccccattgtcatgccta 13390074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 28297641 - 28297552
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||| |||||| |||||||||||| ||||||||||||||||||||||| |||||||  | ||||||||||||| ||||||||||||||    
T  28297641 atgggtcgggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgcctcattgccatgccta 28297552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 36187602 - 36187691
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||  |||||||| |||||||||||||| |||||||  | ||||||||||||||||||||||||||||    
T  36187602 atgggtagggtaacgggtaagtatacgagaatcggatatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 36187691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 44615856 - 44615943
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcc 115  Q
    ||||||||||||| ||||||||| || |||||||||||||||||||||||  ||||||  | ||||||||||||||||||||||||||    
T  44615856 atgggtagggtaacgggtaagtacatgagaatcgggtatggggacggggaatgtaaaacccgtccccaccccgccccattgccatgcc 44615943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 18354451 - 18354540
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| |||||||| ||| | |||||||| |||||||  | ||||||||||||||||||||||||||||    
T  18354451 atgggtagggtaacgggtaagtatatgagaatcggatatagagacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 18354540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 42440015 - 42440107
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctactt 120  Q
    ||||||||||||| |||||||||||| |||||| ||||||||  |||||| ||||||| || ||| ||||| |||||||||||||||||||||    
T  42440015 atgggtagggtaacgggtaagtatatgagaatcaggtatgggagcggggaaggtaaaactcgtccacaccctgccccattgccatgcctactt 42440107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 24710563 - 24710477
Alignment:
Q  31 ggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||  ||||||||||| |||||||||||||| |||||||| |||||||  | |||||||||||||| |||||||||||||    
T  24710563 ggtagggtaacaggtaagtatatgagaatcgggtatggagacggggaaggtaaaacccgtccccaccccgccctattgccatgccta 24710477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 45866569 - 45866655
Alignment:
Q  31 ggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||| |||| |||||||||||| ||||||| ||||| ||||||||| |||||||  | ||||||||||||||||||||||||||||    
T  45866569 ggtagagtaacgggtaagtatatgagaatcgagtatgaggacggggaaggtaaaacacgtccccaccccgccccattgccatgccta 45866655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 49251112 - 49251201
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||   ||| |||||| |||||||| |||||||||||||| |||||||  | ||||||||||||||||||||||||||||    
T  49251112 atgggtagggtaaccagtatgtatatgagaatcggatatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 49251201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 50427034 - 50427123
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| || || |||||||   |||||||||||||| |||| |||||||||    
T  50427034 atgggtagggtaacgggtaagtatatgagaatcgggtatggggatggagaaggtaaaacctatccccaccccgcctcattaccatgccta 50427123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 51421599 - 51421514
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||| |||||||||||| ||||||||||||||||| | ||| |||||||| | |||||||||| ||||||||| |||||||    
T  51421599 gtagggtaacgggtaagtatatgagaatcgggtatggggatgaggaaggtaaaatccgtccccaccccaccccattgcgatgccta 51421514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 34673639 - 34673727
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcct 116  Q
    ||||||||||||| |||||||||||| |||||||| |||||||| | |||  ||||||  | |||||||||||||||||||||||||||    
T  34673639 atgggtagggtaacgggtaagtatatgagaatcggatatggggatgaggaatgtaaaacccgtccccaccccgccccattgccatgcct 34673727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 9983266 - 9983355
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||  ||||||||| | |||||||||||||| ||||||||  |||||| || | |||| |||||||||||||||||||||    
T  9983266 atgggtagggtaacaggtaagtatgtgagaatcgggtatggagacggggaatgtaaaactcgttcccatcccgccccattgccatgccta 9983355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 14892410 - 14892325
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||||| |||||||  | ||||||||| | |||| |||||||||||    
T  14892410 gtagggtaacgggtaagtatatgagaatagggtatggggacggggaaggtaaaacccgtccccacccagtcccaatgccatgccta 14892325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 17092344 - 17092429
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||| ||||||| |||| |||||||| |||| ||||| ||| |||||||  | ||||||||||||||||||||||||||||    
T  17092344 gtagggtaacgggtaagcatatgagaatcggatatgaggacgaggaaggtaaaacccgtccccaccccgccccattgccatgccta 17092429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 29936125 - 29936036
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| ||||||| |||| |||||||| ||||  ||||||||  ||||||  ||||||||||||||||||||| ||||||||    
T  29936125 atgggtagggtaacgggtaagcatatgagaatcggatatgtagacggggaacgtaaaacacatccccaccccgccccattgtcatgccta 29936036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 3628355 - 3628444
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||| |||||||| |||||||||||  ||||||| ||||||||||||||| |||||||  | | || ||||||||| |||||||||||||    
T  3628355 atggatagggtaacgggtaagtatacgagaatcgtgtatggggacggggaaggtaaaacccgttcctaccccgccctattgccatgccta 3628444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 8880099 - 8880010
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||||| ||||||||||  || | ||||||| ||||||||| |||||||  | |||||| ||||||||||| |||||||||    
T  8880099 atgggtagggtaatgagtaagtatataggagtagggtatgaggacggggacggtaaaacccgtccccatcccgccccatttccatgccta 8880010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 32594604 - 32594515
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| | |||||| |||||| |||| || ||||| | || |||||||||| |||||||| ||||||||    
T  32594604 atgggtagggtaacgggtaagtatataaaaatcggatatgggtacggagaaggtaatactcgtccccaccccaccccattgtcatgccta 32594515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 34060411 - 34060483
Alignment:
Q  45 taagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||| ||||||| |||||||||| |||| |||||||  | ||||||||||||||||||| ||||||||    
T  34060411 taagtatatgagaatcgagtatggggactgggaaggtaaaacccgtccccaccccgccccattgtcatgccta 34060483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 38686359 - 38686272
Alignment:
Q  30 gggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||| || ||| ||||| |||||| || ||||||| ||||| ||| |||| | ||||||||||||||||||| ||||||||    
T  38686359 gggtagggtaacggataaatatatgagaatcagggatggggatggggaaggtgaaatccgtccccaccccgccccattgtcatgccta 38686272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 24237141 - 24237199
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaat 86  Q
    |||||| |||||| | |||||||||| ||||||||||||||||||| ||| ||||||||    
T  24237141 atgggtggggtaacgagtaagtatatgagaatcgggtatggggacgaggaaggtaaaat 24237199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 17134651 - 17134606
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacgggga 77  Q
    ||||||||| |||||||||||| ||||| |||||||||||||||||    
T  17134651 gtagggtaacgggtaagtatatgagaattgggtatggggacgggga 17134606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 19892659 - 19892571
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||   |||||||||| ||| | ||| ||||||| ||||| || |||| ||||||| | |||||||||||||||||||||    
T  19892659 atgggtagggtaacaagtaagtatatgagagtaggggatggggatggggaaggaaaaactcatcccta-cccgccccattgccatgccta 19892571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 2514337 - 2514273
Alignment:
Q  55 agaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    ||||| ||||||| | |||||||  |||||| ||||||| ||||||| |||||||||||||||||    
T  2514337 agaattgggtatgagaacggggaatgtaaaactcatccctaccccgctccattgccatgcctact 2514273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 14890810 - 14890754
Alignment:
Q  61 gggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||||||| |||||||  | ||||||||| ||||||||| ||||||||    
T  14890810 gggtatggggacggggaaggtaaaacccgtccccacccagccccattgtcatgccta 14890754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 119
Target Start/End: Original strand, 35937212 - 35937287
Alignment:
Q  43 ggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    ||||||||||| |||||||||||| ||||||||||  |||||| |  ||| || |||||||||||| ||||||||||    
T  35937212 ggtaagtatatgagaatcgggtatagggacggggaatgtaaaacttgtccaca-cccgccccattgacatgcctact 35937287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 16903212 - 16903129
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgcca 111  Q
    ||||||||||||| || ||| || ||  || | ||||||||||| ||||| ||||| | || ||||||||||||||||||||||    
T  16903212 atgggtagggtaacggataaataaatgggagtagggtatggggatggggaaggtaatactcgtccccaccccgccccattgcca 16903129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 16433549 - 16433630
Alignment:
Q  36 ggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||| |||||||||||  |||||||| ||| |||||||||| | ||||| || |||| | ||| |||||||| ||||||||    
T  16433549 ggtaacgggtaagtataagagaatcggatatagggacggggaagataaaactcgtccctatcccaccccattgtcatgccta 16433630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 19572925 - 19572966
Alignment:
Q  73 ggggatggtaaaattcatccccaccccgccccattgccatgc 114  Q
    ||||| ||||||| || |||||||||||||||||||||||||    
T  19572925 ggggaaggtaaaactcgtccccaccccgccccattgccatgc 19572966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 25180850 - 25180761
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||| ||| ||||||| ||||   ||| || ||||||||||| || || |||||||  ||||| || ||||||||||||||||||    
T  25180850 atgggtaggataacgggtaagaatatcgaaataggctatggggacggagaaggaaaaattcgaccccatcctgccccattgccatgccta 25180761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 39218910 - 39218825
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||  ||||||| ||| ||| |  |||| ||||||||||| ||||||| || |||| |||||||| |||||| |||||||    
T  39218910 gtagggtaacaggtaagtgtataagagtatggtacggggacggggaaggtaaaactcgtccctaccccgcctcattgcaatgccta 39218825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 39615994 - 39615921
Alignment:
Q  44 gtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||| |||||||| |||   ||||||||  |||| || | |||||||| |||||||||||||||||||    
T  39615994 gtaagtatatgagaatcggatataaagacggggaaagtaagatccgtccccaccgcgccccattgccatgccta 39615921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 41479574 - 41479643
Alignment:
Q  45 taagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgc 114  Q
    ||||||||| ||| | | ||||||||||| ||| ||| |||  |||||||||||| ||||||||||||||    
T  41479574 taagtatatgagagtagagtatggggacgaggaaggtgaaacccatccccaccccaccccattgccatgc 41479643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 115
Target Start/End: Complemental strand, 33062065 - 33061978
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcc 115  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||    
T  33062065 atgggtagggtaacgggtaagtatatgagaatcgggtatggggacgaggaaggtaaaattcatccctaccccgccccattgccatgcc 33061978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 12141105 - 12141015
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    |||||||| |||| |||||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||    
T  12141105 atgggtagagtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaactcgtccccaccccgccccattgccatgcctac 12141015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 3484303 - 3484393
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    ||||||||||||| |||||||||||| |||||||||||| |||||||||| |||||||  | |||||||||||||||||||||||||||||    
T  3484303 atgggtagggtaacgggtaagtatatgagaatcgggtatagggacggggaaggtaaaacccgtccccaccccgccccattgccatgcctac 3484393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 27534403 - 27534313
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||||||| |||||||  | |||||||||||||||||||||||||||||    
T  27534403 atgggtagggtaacggttaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgcctac 27534313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 5863752 - 5863841
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| |||||| |||||||||||||||| |||||||  | ||||||||||||||||||||||||||||    
T  5863752 atgggtagggtaacgggtaagtatatgagaatcaggtatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 5863841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 10188454 - 10188543
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||  ||||||||||| ||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||||||||||    
T  10188454 atgggtagggtaacaggtaagtatatgagaatcgggtatggggatggggaaggtaaaactcgtccccaccccgccccattgccatgccta 10188543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 24225408 - 24225320
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| | |||||||||| |||||||||||||||||| |||| |||||||  | ||||||||||||||||||||||||||||    
T  24225408 atgggtagggtaacgagtaagtatatgagaatcgggtatggggac-gggaaggtaaaacccgtccccaccccgccccattgccatgccta 24225320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 32052764 - 32052675
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| ||||||||||||| ||||||||| ||||||| || || ||| ||||| |||||||||||||||    
T  32052764 atgggtagggtaacgggtaagtatatgagaatcgggtatgaggacggggaaggtaaaactcgtctccatcccgctccattgccatgccta 32052675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 9442357 - 9442268
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||| ||||| |||||||||||| |||||||||||||| |||||||| |||||||  | ||||||||||| ||||||| ||||||||    
T  9442357 atgggtaaggtaacgggtaagtatatgagaatcgggtatggagacggggaaggtaaaacccgtccccaccccgtcccattgtcatgccta 9442268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 14505807 - 14505718
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||| |||  ||||||  | |||||||| ||||| |||||||||||||    
T  14505807 atgggtagggtaacgggtaagtatatgagaatcgggtatggggacgaggaatgtaaaacccgtccccacctcgcccaattgccatgccta 14505718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 32853552 - 32853463
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||  ||||||||||| | ||||||||||||||| ||||| |||||||  | || |||||||||||||||||||||||||    
T  32853552 atgggtagggtaactggtaagtatatgataatcgggtatggggatggggaaggtaaaacccgtctccaccccgccccattgccatgccta 32853463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 10142897 - 10142989
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctactt 120  Q
    ||||||||||||| |||||||||||  |||||||| |||| | ||||||| ||||||| || |||| | ||||||||||||||||||||||||    
T  10142897 atgggtagggtaacgggtaagtatacgagaatcggatatgagaacggggaaggtaaaactcgtccctatcccgccccattgccatgcctactt 10142989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 30815954 - 30815870
Alignment:
Q  33 tagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    |||||||| |||||||||||| |||||| ||||||| ||||||||  ||||||  ||||||||||||| |||||||||||||||||    
T  30815954 tagggtaacgggtaagtatatgagaatcaggtatggagacggggaatgtaaaacccatccccaccccg-cccattgccatgcctac 30815870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 9402251 - 9402165
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgc 114  Q
    ||||||||||||| |||||||||| |  || | |||||||||||||| || |||||||  |||||||||||||||||||| ||||||    
T  9402251 atgggtagggtaacgggtaagtatttaggagtagggtatggggacggagaaggtaaaaaccatccccaccccgccccattaccatgc 9402165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 2367018 - 2366945
Alignment:
Q  44 gtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||| |||||||| |||||||| | ||| |||||||  | ||||||||||||||||||||||||||||    
T  2367018 gtaagtatatgagaatcggatatggggatgaggaaggtaaaacccgtccccaccccgccccattgccatgccta 2366945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 14032337 - 14032282
Alignment:
Q  31 ggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaat 86  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||  |||||||    
T  14032337 ggtagggtaacgggtaagtatattaaaatcgggtatggggacggggaatgtaaaat 14032282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 34179457 - 34179534
Alignment:
Q  36 ggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatg 113  Q
    ||||| |||||||||||| ||| | ||||||| ||||||||| ||| ||| || ||||||||| ||||||||||||||    
T  34179457 ggtaacgggtaagtatatgagagtagggtatgaggacggggaaggtgaaactcgtccccaccctgccccattgccatg 34179534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 9458406 - 9458317
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| ||||||||||||  || | ||| ||||||| ||||| || ||||  | ||||||||||||| ||||| ||||||||    
T  9458406 atgggtagggtaacgggtaagtatatgggagtaggggatggggatggggaaggaaaaacccgtccccaccccgcctcattggcatgccta 9458317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 11762150 - 11762065
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||  ||||||||||| ||||||| ||||||  |||||||  ||||||  | |||||||||  |||||||||||||||||    
T  11762150 gtagggtaacaggtaagtatataagaatcgtgtatggaaacggggaatgtaaaacccgtccccacccttccccattgccatgccta 11762065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 29342472 - 29342528
Alignment:
Q  61 gggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||| ||||  |||||| || ||| ||||||||||||||||||||||||    
T  29342472 gggtatggggacagggaaagtaaaactcctccacaccccgccccattgccatgccta 29342528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 256936 - 257022
Alignment:
Q  31 ggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||  ||||||| |||  || | ||||||| ||||||||| ||| |||  | ||||||||||||| ||||||||||||||    
T  256936 ggtagggtaaatggtaagtgtatatgagtagggtatgaggacggggaaggtgaaacccgtccccaccccgcctcattgccatgccta 257022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 29340447 - 29340391
Alignment:
Q  61 gggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||| ||||  |||||  || ||| ||||||||||||||||||||||||    
T  29340447 gggtatggggacagggaaagtaaatctcctccacaccccgccccattgccatgccta 29340391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 30846653 - 30846558
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctacttcaa 123  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||    
T  30846653 atgggtagggtaacggctaagtatatgagaatcgggtatggggacggggaaggtaaaattcgtccccatcccgccccattgccatgcctagttcaa 30846558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 13830444 - 13830355
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||    
T  13830444 atgggtagggtaataggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 13830355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 36128488 - 36128580
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctactt 120  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||||  | |||||||||||||||||||||||||||||||    
T  36128488 atgggtagggtaacgggtaagtatatgagaatcggatatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgcctactt 36128580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 7315030 - 7315119
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||| ||||||| |||||||||||| ||||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||    
T  7315030 atgggcagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 7315119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 10208810 - 10208899
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| ||||||||||||| | ||||||| |||||||  | ||||||||||||||||||||||||||||    
T  10208810 atgggtagggtaacgggtaagtatatgagaatcgggtatgagaacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 10208899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 11009116 - 11009205
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| | |||||||||| ||||||||||||||||||||||| | |||||  | ||||||||||||||||||||||||||||    
T  11009116 atgggtagggtaacgtgtaagtatatgagaatcgggtatggggacggggaagataaaacccgtccccaccccgccccattgccatgccta 11009205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 9632106 - 9632022
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccat 112  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||||||| |||||||  | |||||||||||||||||||||||    
T  9632106 atgggtagggtaacgggtaagtatataagaatcgggtatgggaacggggaaggtaaaacccgtccccaccccgccccattgccat 9632022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 31942535 - 31942625
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    ||||||||||||| |||||||||||| | |||||||||||||||||||||  ||||||  | ||||||||||||||||||| |||||||||    
T  31942535 atgggtagggtaacgggtaagtatatgataatcgggtatggggacggggaatgtaaaacccgtccccaccccgccccattgtcatgcctac 31942625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 15546399 - 15546313
Alignment:
Q  31 ggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||| |||||||||||| ||||| ||||||||||| ||||| |||||||  | ||||||||||| ||||||||||||||||    
T  15546399 ggtagggtaacgggtaagtatatgagaatagggtatggggatggggaaggtaaaacccgtccccaccccgacccattgccatgccta 15546313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 6028272 - 6028358
Alignment:
Q  31 ggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||  |||||| |||| |||||||||||||||||||||||  ||||||  | |||||||||||||||| |||||||||||    
T  6028272 ggtagggtaacaggtaaggatataagaatcgggtatggggacggggaatgtaaaacccgtccccaccccgccccaatgccatgccta 6028358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 10920371 - 10920282
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||  ||||||||||| ||||| |||||||| || ||||| | |||||  | ||||||||||||||||||||||||||||    
T  10920371 atgggtagggtaacaggtaagtatatgagaatagggtatggagatggggaagataaaacccgtccccaccccgccccattgccatgccta 10920282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 26755442 - 26755353
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||||||||||||||||  || | ||| |||||||||||||||| |||| || ||| ||  ||||||||||||||||||||    
T  26755442 atgggtagggtaatgggtaagtatatgggagtaggggatggggacggggatggcaaaactcgtccacattccgccccattgccatgccta 26755353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 35248821 - 35248906
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatg 113  Q
    |||||||||||||||||||||||| |  || |  |||||||||||||||| |||||||| | ||||||||||||||| ||||||||    
T  35248821 atgggtagggtaatgggtaagtatttgggagtaaggtatggggacggggaaggtaaaatccgtccccaccccgcccctttgccatg 35248906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 37999191 - 37999103
Alignment:
Q  30 gggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    ||||||||||| |||||| ||||| ||||||| ||||||||||||||| |||||||  | || ||||||| |||||||||||||||||||    
T  37999191 gggtagggtaacgggtaattatatgagaatcgagtatggggacggggaaggtaaaa-ccgtctccaccccaccccattgccatgcctact 37999103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 10212147 - 10212063
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| ||||||||| ||||||| ||||| |||||||     |||  ||||||||||||||||||||||    
T  10212147 atgggtagggtaacgggtaagtatatgagaatcggggatggggatggggaaggtaaaa-----cccgtccccgccccattgccatgccta 10212063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 18592704 - 18592773
Alignment:
Q  172 tttcagacttatcactgatagccatttcaaaagtttgaagtgacccaataagttcttctactttcatgtt 241  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||| ||| || || |||||||||||    
T  18592704 tttcagatctatcactgatagccaattcaaaagtttgaagtgacccaacaagctcatccactttcatgtt 18592773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 24414512 - 24414585
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgc 101  Q
    ||||||||||||| |||||||| ||| ||||| ||||||| ||||||||| ||||||| || ||||||||||||    
T  24414512 atgggtagggtaacgggtaagtgtatgagaatagggtatgtggacggggaaggtaaaactcgtccccaccccgc 24414585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 22900495 - 22900419
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgcccc 104  Q
    ||||||||||||| |||||||||||| ||||| ||||||| |||  |||| ||||||| || |||||||||||||||    
T  22900495 atgggtagggtaacgggtaagtatatgagaatagggtatgaggatagggaaggtaaaactcgtccccaccccgcccc 22900419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 18106459 - 18106545
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcc 115  Q
    |||||||||||||  ||||||||||  ||||||||||||||||||||||| | |||||  | |||||| | |||||||||||||||||    
T  18106459 atgggtagggtaacaggtaagtatacgagaatcgggtatggggacggggaagataaaacccgtcccca-cacgccccattgccatgcc 18106545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 16227086 - 16227159
Alignment:
Q  44 gtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||| |||||||||||||||||||||||  ||||||  | ||||||||| ||| | ||||||||||||    
T  16227086 gtaagtatatgagaatcgggtatggggacggggaatgtaaaacccgtccccaccctgcctcgttgccatgccta 16227159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 25210031 - 25209942
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||| |||||| |||||||||||| | | | ||||||| ||||| ||| ||||||| || ||| |||||| |||||||||||||||||    
T  25210031 atgggttgggtaacgggtaagtatatgaaagtagggtatgaggacgaggaaggtaaaactcgtcctcaccccaccccattgccatgccta 25209942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 37473110 - 37473199
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||  ||||||||||| | |||| ||||| |||||||||| |||||||  |  |||||||| ||||||||| ||||||||    
T  37473110 atgggtagggtaacaggtaagtatatgaaaatcaggtatagggacggggaaggtaaaacccgaccccaccctgccccattgacatgccta 37473199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 13705742 - 13705822
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgc 114  Q
    ||||||||||||| || ||||||||| ||||||||||||      ||| | ||||||| || |||||||||||||||||||||||||    
T  13705742 atgggtagggtaacggataagtatatgagaatcgggtat------gggaaaggtaaaactcgtccccaccccgccccattgccatgc 13705822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 44746500 - 44746567
Alignment:
Q  50 atattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||| |||| |||||||||||||||||| ||||| |  | | ||||||||||||||||||||||||||    
T  44746500 atatgagaaccgggtatggggacggggaaggtaacacacgtgcccaccccgccccattgccatgccta 44746567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 45256529 - 45256443
Alignment:
Q  31 ggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||| || ||| ||||| ||||| || ||||||||||| ||  ||||||| | || ||||||||| |||||||||||||||    
T  45256529 ggtagggtaacggataaatatatgagaattggatatggggacggagaatgtaaaatccgtctccaccccgctccattgccatgccta 45256443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 37319636 - 37319563
Alignment:
Q  45 taagtatattagaatcgggtatggggacggggatggtaaaattcat-ccccaccccgccccattgccatgccta 117  Q
    ||||||||| |||||||||||||||||||||||  |||||| || | |||||||| | ||||||| ||||||||    
T  37319636 taagtatatgagaatcgggtatggggacggggaatgtaaaactcgtcccccaccctgtcccattgtcatgccta 37319563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 13954394 - 13954306
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcct 116  Q
    ||||||||| ||| | |||||||||| ||| |  | |||||||||| ||| |||||||  |||||||||||| ||||||| ||||||||    
T  13954394 atgggtaggataacgagtaagtatatgagagtatgatatggggacgaggaaggtaaaacccatccccaccccaccccattaccatgcct 13954306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 14095601 - 14095513
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcct 116  Q
    ||||||||| ||| | |||||||||| ||| |  | |||||||||| ||| |||||||  |||||||||||| ||||||| ||||||||    
T  14095601 atgggtaggataacgagtaagtatatgagagtatgatatggggacgaggaaggtaaaacccatccccaccccaccccattaccatgcct 14095513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 3546849 - 3546763
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgc 114  Q
    |||| |||||||| |||||||||||| ||| | ||| ||||||| ||||| || ||||  | |||||||  ||||||||||||||||    
T  3546849 atggatagggtaaggggtaagtatatgagagtaggggatggggatggggaaggcaaaacccgtccccacatcgccccattgccatgc 3546763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 45115280 - 45115218
Alignment:
Q  55 agaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||| | || ||| ||| |||  | ||||||||||||||||||||||||||||    
T  45115280 agaatcgggtatggagtcgaggaaggtcaaacccgtccccaccccgccccattgccatgccta 45115218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 37106414 - 37106357
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaa 85  Q
    |||| |||| |||||| ||| ||||| ||||||||||||||||||| ||| |||||||    
T  37106414 atggataggctaatggataaatatatgagaatcgggtatggggacgaggaaggtaaaa 37106357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 38342925 - 38343010
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatg 113  Q
    ||||||||||||| || ||| |||||  || | ||| ||||||| |||||||  ||||| | ||||||||||||||||||| ||||    
T  38342925 atgggtagggtaacggataaatatatgtgagtaggggatggggatggggatgacaaaatccgtccccaccccgccccattgtcatg 38343010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 14331214 - 14331162
Alignment:
Q  65 atggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||| ||||| || ||||| | |||||| |||||||||||||||||||||    
T  14331214 atggggatggggaaggcaaaatccgtccccatcccgccccattgccatgccta 14331162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 8e-30; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 11866186 - 11866068
Alignment:
Q  129 tcattactggtgttggacataaatgcaatgcctttgtttttcctttcagacttatcactgatagccatttcaaaagtttgaagtgacccaataagttctt 228  Q
    |||| |||||||||||||| ||| |||||||  |||| |||| |||||||  |||||||||||||||||||||| |||| ||||||||||||||||||||    
T  11866186 tcatcactggtgttggacacaaaggcaatgctcttgtgtttcttttcagatctatcactgatagccatttcaaaggtttcaagtgacccaataagttctt 11866087  T
Q  229 ctactttcatgttcttaat 247  Q
    | |||||| ||||||||||    
T  11866086 caactttcttgttcttaat 11866068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 7608684 - 7608593
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||    
T  7608684 atgggtagggtaacaggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgcctact 7608593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 16217049 - 16217139
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||||  | ||| |||||||||||||||||||||||||    
T  16217049 atgggtagggtaacgggtaagtatatgagaatcggatatggggacggggaaggtaaaacccttccgcaccccgccccattgccatgcctac 16217139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 5902995 - 5903084
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| ||||| |||||||  | |||||||||||||| |||||||||||||    
T  5902995 atgggtagggtaacgggtaagtatatgagaatcgggtatggggatggggaaggtaaaacccgtccccaccccgcccaattgccatgccta 5903084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 6382655 - 6382744
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| |||||||||||||||| |||||| |||||||    ||||||||||||||||||||||||||||    
T  6382655 atgggtagggtaacgggtaagtatatgagaatcgggtatgggggcggggaaggtaaaaccggtccccaccccgccccattgccatgccta 6382744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 11123248 - 11123337
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||  ||||||||||| ||||||||||||||| ||||||| |||||||  | ||||||||||||||||||||||||||||    
T  11123248 atgggtagggtaacaggtaagtatatgagaatcgggtatgggaacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 11123337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 15987610 - 15987699
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||  ||||||||||| ||||||| ||||||||||| ||| ||||||| || ||||||||||||||||||||||||||||    
T  15987610 atgggtagggtaacaggtaagtatatgagaatcgagtatggggacgaggaaggtaaaactcgtccccaccccgccccattgccatgccta 15987699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 44887620 - 44887531
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||| ||||||||  ||||||||||| ||||||||||||| |||| |||| |||||||| ||||||||||||||||||||||||||||||    
T  44887620 atggatagggtaacaggtaagtatatgagaatcgggtatgaggacagggaaggtaaaatccatccccaccccgccccattgccatgccta 44887531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 47550734 - 47550823
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||| |||||||| |||||||||||  ||||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||    
T  47550734 atggatagggtaacgggtaagtatacgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 47550823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 31918941 - 31919025
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccat 112  Q
    |||| |||||||| |||||||||||| ||||||||||||||||||||||| |||||||  | |||||||||||||||||||||||    
T  31918941 atggatagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccccattgccat 31919025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 55827004 - 55827095
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    |||||||||||||  | ||||||||| |||||| |||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||    
T  55827004 atgggtagggtaacagataagtatatgagaatccggtatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgcctact 55827095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 6482406 - 6482495
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| ||||||||||||||| |||||||  ||||||  | |||||||||||||||||| |||||||||    
T  6482406 atgggtagggtaacgggtaagtatatgagaatcgggtatgggaacggggaatgtaaaacccgtccccaccccgccccattaccatgccta 6482495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 11027786 - 11027697
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| | |||||||||| |||||| |||||| ||||||||| |||||||  | ||||||||||||||||||||||||||||    
T  11027786 atgggtagggtaacgagtaagtatatgagaatcaggtatgaggacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 11027697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 43892225 - 43892136
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||| |||||||||||||||||| ||||| |||||||| |||||||| |||||||| | |||||| |||| ||||||||||||||||    
T  43892225 atgggtaaggtaatgggtaagtatatgagaattgggtatggagacggggaaggtaaaatccgtccccatcccgtcccattgccatgccta 43892136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 4766696 - 4766785
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||| ||||||||  ||||||||||| |||||||| |||||||||||||| |||||||  | ||||||||||||| ||||||||||||||    
T  4766696 atggatagggtaacaggtaagtatatgagaatcggatatggggacggggaaggtaaaacacgtccccaccccgcctcattgccatgccta 4766785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 21423571 - 21423483
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctactt 120  Q
    ||||||||| |||||||||||| ||||||||||||||||||| | |  ||||||    |||||||||||||||||||||||||||||||    
T  21423571 gtagggtaacgggtaagtatatgagaatcgggtatggggacgagaaatgtaaaacctgtccccaccccgccccattgccatgcctactt 21423483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 36918773 - 36918690
Alignment:
Q  34 agggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||  ||||||||||| ||| | ||||||||||||||||| ||||||| ||||||||||||||||  |||||||||||||    
T  36918773 agggtaacaggtaagtatatgagagtagggtatggggacggggaaggtaaaactcatccccaccccgcctgattgccatgccta 36918690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 19534169 - 19534083
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgc 114  Q
    ||||||||||||||| |||||||||| ||||||||||||||| ||||||   ||||||  |||||||||||| |||||||| |||||    
T  19534169 atgggtagggtaatgagtaagtatatgagaatcgggtatgggaacggggtatgtaaaacacatccccaccccaccccattgtcatgc 19534083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 31752251 - 31752165
Alignment:
Q  31 ggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||| ||| |||||||||||| ||||||||||||||||||| ||| |||||||  |||||||| ||| ||||||| |||||||||    
T  31752251 ggtaggataacgggtaagtatatgagaatcgggtatggggacgaggaaggtaaaacccatccccatcccaccccattaccatgccta 31752165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 1724691 - 1724780
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| || ||| ||||| |||||||||||| ||||||||||  | ||||  | ||||||||||||||||||||||||||||    
T  1724691 atgggtagggtaacggataaatatatgagaatcgggtattgggacggggaatgcaaaacccgtccccaccccgccccattgccatgccta 1724780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 3737511 - 3737422
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||| ||||| |||||  |||||||||| || || |||||||  | ||||||||||||||||||||||||||||    
T  3737511 atgggtagggtaacgggtaaatatatgagaatatggtatggggatggagaaggtaaaacccgtccccaccccgccccattgccatgccta 3737422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 26564545 - 26564456
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||  ||||||||||| |||||| |||||| ||||||| |  ||||||  | ||||||||||||||||||||||||||||    
T  26564545 atgggtagggtaacaggtaagtatatgagaatcaggtatgaggacgggaaatgtaaaacccgtccccaccccgccccattgccatgccta 26564456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 10286982 - 10286906
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgcccc 104  Q
    |||| |||||||| |||||||||||||||||| ||||||||||||||||  |||||||  | |||||||||||||||    
T  10286982 atggatagggtaacgggtaagtatattagaatagggtatggggacgggggaggtaaaacccgtccccaccccgcccc 10286906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 12379755 - 12379830
Alignment:
Q  172 tttcagacttatcactgatagccatttcaaaagtttgaagtgacccaataagttcttctactttcatgttcttaat 247  Q
    |||| ||| |||||||||||||||||||||||||||||||| | |||||||| ||||| || |||||||| |||||    
T  12379755 tttccgacctatcactgatagccatttcaaaagtttgaagttatccaataagatcttcaaccttcatgtttttaat 12379830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 48459196 - 48459109
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    ||||||||| |||||||||||| ||||||||||||||||| || || |||||||  | ||||||||||  ||||||| ||||||||||    
T  48459196 gtagggtaacgggtaagtatatgagaatcgggtatggggatggagaaggtaaaacccgtccccaccccttcccattgtcatgcctact 48459109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 42299540 - 42299448
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcat---ccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||||||  |||||| || |   |||| |||| |||||||||||||||||    
T  42299540 atgggtagggtaacgagtaagtatatgagaatcgggtatggggacggggaatgtaaaactcgttccccccccccccccccattgccatgccta 42299448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 39046668 - 39046583
Alignment:
Q  31 ggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcct 116  Q
    |||||| ||| | |||||||||| ||||||||||||||||||||| | |||||||  | ||||||||||| ||||||| |||||||    
T  39046668 ggtaggataacgagtaagtatataagaatcgggtatggggacgggaaaggtaaaacccgtccccaccccgtcccattgtcatgcct 39046583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 44317258 - 44317201
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaa 85  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||||||| |||||||    
T  44317258 atgggtagggtaacaggtaagtatatgagaatcgggtatggggacggggaaggtaaaa 44317201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 29755712 - 29755800
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcct 116  Q
    |||||||  |||| |||||||| ||| |||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||||||    
T  29755712 atgggtaaagtaacgggtaagtgtatgagaatcgggtatggggacggggaatgtaaaacctgtccccaccctgccccattgccatgcct 29755800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 37348837 - 37348749
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcct 116  Q
    |||||||||||||  ||||||||||  |||||||||||||||||||| ||  ||||||  | |||| |||||||||||||| |||||||    
T  37348837 atgggtagggtaacaggtaagtataagagaatcgggtatggggacggagaatgtaaaacccgtccctaccccgccccattgtcatgcct 37348749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 9229992 - 9229909
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcc 115  Q
    ||||||||| ||| ||||||||  ||||||||||||||||||||||   ||||| || ||| |||||||||||| |||||||||    
T  9229992 gtagggtaacgggcaagtatatgtgaatcgggtatggggacggggaatataaaactcgtcctcaccccgccccaatgccatgcc 9229909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 13770854 - 13770914
Alignment:
Q  38 taatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccc 98  Q
    |||||||||||||||| |||||||||||| ||||||||||  ||||||| | |||||||||    
T  13770854 taatgggtaagtatataagaatcgggtatagggacggggaatgtaaaatccgtccccaccc 13770914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 42774458 - 42774386
Alignment:
Q  45 taagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||| ||||| || |||||||||| ||| |||||||  | |||| |||||||||||||||||||||||    
T  42774458 taagtatatgagaattggatatggggacgtggaaggtaaaacccgtccctaccccgccccattgccatgccta 42774386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 53906657 - 53906748
Alignment:
Q  28 atgggtagggtaatgggtaagtatatta-gaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    ||||||||||||| |||||||||  ||  ||||||||||||| || ||| | |||||||  | |||||||||| ||||||||||||||||||    
T  53906657 atgggtagggtaacgggtaagtaatttgcgaatcgggtatggagatgggaaaggtaaaacccgtccccaccccaccccattgccatgcctac 53906748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 43309181 - 43309091
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    ||||||||||||| ||||||  |||  ||| | ||||||| ||| ||||| |||||||  | |||||||| ||||||||||||||||||||    
T  43309181 atgggtagggtaacgggtaaagatacgagattagggtatgaggatggggaaggtaaaacccgtccccaccacgccccattgccatgcctac 43309091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 42907518 - 42907433
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||| |||||||||||| ||||| | ||||| | ||||||| |||||||    || ||||||| |||||||||||||||||    
T  42907518 gtagggtaacgggtaagtatatgagaatagtgtatgcgaacggggaaggtaaaaccagtctccaccccaccccattgccatgccta 42907433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 6096080 - 6096020
Alignment:
Q  181 tatcactgatagccatttcaaaagtttgaagtgacccaataagttcttctactttcatgtt 241  Q
    ||||| ||||||| | |||||| ||||||||||||||||||||||| || || ||||||||    
T  6096080 tatcattgatagctaattcaaaggtttgaagtgacccaataagttcatccaccttcatgtt 6096020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 32596561 - 32596651
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    |||||||||||||   |||||||||| |||||  | ||||||||||| || ||||||| |||||| |||||| |||| |||||||| |||||    
T  32596561 atgggtagggtaacaagtaagtatatgagaattagatatggggacggagaaggtaaaactcatcctcaccccacccc-ttgccatgtctact 32596651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 39375052 - 39374967
Alignment:
Q  31 ggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||| |||||||||||| |||||| | ||||  |||||| || ||||||  | ||||||||||||| ||||| ||||||||    
T  39375052 ggtagggtaacgggtaagtatatgagaatcagatatgaagacgggaat-gtaaaacccgtccccaccccgcctcattgtcatgccta 39374967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 47239766 - 47239849
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||| |||||||| || ||| ||||| |||||||| |||||||||||||| ||||||      |||| |||| |||||||||||||||||    
T  47239766 atggatagggtaacggataaatatatgagaatcggatatggggacggggaaggtaaa------ccccccccccccccattgccatgccta 47239849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 39772117 - 39772189
Alignment:
Q  43 ggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcct 116  Q
    ||||||||||| ||| | |||||||||||| ||||  ||||||| | || ||||||| ||||||||||||||||    
T  39772117 ggtaagtatatgagagtagggtatggggac-gggaaagtaaaatccgtctccaccccaccccattgccatgcct 39772189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 47103430 - 47103341
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| || ||| |||||  || | ||| || |||| ||||| || |||| || ||||| ||||||||||||||||||||||    
T  47103430 atgggtagggtaacggataaatatatgggagtaggggattgggatggggaaggcaaaactcgtcccctccccgccccattgccatgccta 47103341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 45275233 - 45275141
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctactt 120  Q
    |||||||||||||    |||||||||  |||||||  ||||||| ||||| ||||||| || || | || ||||| |||||||||||||||||    
T  45275233 atgggtagggtaacatataagtatatgggaatcggagatggggatggggaaggtaaaactcgtctctactccgcctcattgccatgcctactt 45275141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 50509924 - 50509996
Alignment:
Q  47 agtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccg-ccccattgccatgcctac 118  Q
    ||||||| ||||||||| ||| |||||||||  |||||||   ||||||||||  ||||||||||||||||||    
T  50509924 agtatatgagaatcgggcatgaggacggggaatgtaaaatctgtccccacccccaccccattgccatgcctac 50509996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 32302768 - 32302679
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||    
T  32302768 atgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 32302679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 24927657 - 24927565
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctactt 120  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||  | ||||||||||| |||||||||||||||||||    
T  24927657 atgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgtcccattgccatgcctactt 24927565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 27932143 - 27932055
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcct 116  Q
    ||||||||||||| |||||||||||| ||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||||||||||    
T  27932143 atgggtagggtaacgggtaagtatatgagaatcgcgtatggggacgaggaaggtaaaatccatccccaccccgccccattgccatgcct 27932055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 2076216 - 2076306
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||  | |||||||| ||||||||||||||||||||    
T  2076216 atgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccgcgccccattgccatgcctac 2076306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 14186048 - 14185963
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||| |||||||||||| ||||| |||||||||||||||||  |||||| || ||||||||||||||||||||||||||||    
T  14186048 gtagggtaacgggtaagtatatgagaattgggtatggggacggggaatgtaaaactcgtccccaccccgccccattgccatgccta 14185963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 17220425 - 17220336
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||| |||||||| |||||||||||| |||||||||||||||||||| || |||||||  | ||||||||||||||||||||||||||||    
T  17220425 atggatagggtaacgggtaagtatatgagaatcgggtatggggacggagaaggtaaaacccgtccccaccccgccccattgccatgccta 17220336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 17468964 - 17468875
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| || ||||||||| |||||||||||||||||||||||  |||||| || ||| ||||||||||||||||||||||||    
T  17468964 atgggtagggtaacggataagtatatgagaatcgggtatggggacggggaatgtaaaactcgtcctcaccccgccccattgccatgccta 17468875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 29109198 - 29109286
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcct 116  Q
    ||||||||||||| |||||| ||||| ||||||| ||||||| ||||||| |||||||| | |||||||||||||||||||||||||||    
T  29109198 atgggtagggtaacgggtaaatatatgagaatcgagtatgggaacggggaaggtaaaatccgtccccaccccgccccattgccatgcct 29109286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 34301534 - 34301626
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctactt 120  Q
    |||||||||||||  ||||||||||| | ||||||||||||||| ||||| |||||||  | |||||||||||||||||||||||||||||||    
T  34301534 atgggtagggtaacaggtaagtatatgataatcgggtatggggatggggaaggtaaaacccgtccccaccccgccccattgccatgcctactt 34301626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 27058710 - 27058800
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    ||||||||||||| |||||||||||| ||||| | ||||||||||||||  |||||||  | |||||||||||||||||||||||||||||    
T  27058710 atgggtagggtaacgggtaagtatatgagaatagagtatggggacgggggaggtaaaacccgtccccaccccgccccattgccatgcctac 27058800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 28977494 - 28977584
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    |||||||||||||  ||||||||||| |||||||||||||||||| |||| | |||||  | |||||||||||||||||||||||||||||    
T  28977494 atgggtagggtaacaggtaagtatataagaatcgggtatggggacagggaagataaaacacgtccccaccccgccccattgccatgcctac 28977584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 45235774 - 45235689
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||| ||||||||| || |||||||| |||||||||||||| |||||||  | ||||||||||||||||||||||||||||    
T  45235774 gtagggtaacgggtaagtacatgagaatcggatatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 45235689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 39445942 - 39446034
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctactt 120  Q
    ||||||||||||| |||||||||||| |||||| ||||||||||||| || ||||||| || ||||||||||||||||||  |||| ||||||    
T  39445942 atgggtagggtaacgggtaagtatatgagaatcaggtatggggacggagaaggtaaaactcgtccccaccccgccccattatcatgtctactt 39446034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 20399344 - 20399249
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctacttcaa 123  Q
    ||||||| |||||| ||||||||||| ||||| ||||||||||||| |||  ||||||  | |||||||||||||||||||||||||||| |||||    
T  20399344 atgggtaaggtaataggtaagtatatgagaattgggtatggggacgaggaatgtaaaacccttccccaccccgccccattgccatgcctagttcaa 20399249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 4231099 - 4231188
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| || ||| ||||| |||||||||||||||||||| || |||||||  | |||||||||| |||||||||||||||||    
T  4231099 atgggtagggtaacggataattatatgagaatcgggtatggggacggagaaggtaaaacccgtccccaccccaccccattgccatgccta 4231188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 5858837 - 5858926
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||| ||||| |||||||||||| |||||| ||||||||||||||||  ||||||    ||||||||||||||||||||||||||||    
T  5858837 atgggtaaggtaacgggtaagtatatgagaatcaggtatggggacggggaatgtaaaacctgtccccaccccgccccattgccatgccta 5858926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 31323572 - 31323491
Alignment:
Q  33 tagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgc 114  Q
    |||||||| |||||||||||| ||||||||||||| | ||||||| |||||||| | |||||||||||| ||||||||||||    
T  31323572 tagggtaaagggtaagtatatgagaatcgggtatgagaacggggaaggtaaaatccgtccccaccccgctccattgccatgc 31323491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 116
Target Start/End: Complemental strand, 9434738 - 9434651
Alignment:
Q  29 tgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcct 116  Q
    |||||| ||||| |||||||||||| ||||  ||||||||||| ||||| ||||||| || ||||| |||||||||||||||||||||    
T  9434738 tgggtaaggtaacgggtaagtatatgagaacagggtatggggatggggaaggtaaaactcgtcccctccccgccccattgccatgcct 9434651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 24870403 - 24870494
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| | ||| | |||||  |  |||||||| ||||||||||||||||||||    
T  24870403 atgggtagggtaacgggtaagtatatgagaatcgggtatggggatgaggaagataaaacccgcccccaccctgccccattgccatgcctact 24870494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 9642747 - 9642837
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    ||||||||| ||| |||||||||||| ||||| | ||||||||| ||||| |||||||  | |||||||||| ||||||||||||||||||    
T  9642747 atgggtaggataacgggtaagtatatgagaatagagtatggggatggggaaggtaaaacccgtccccaccccaccccattgccatgcctac 9642837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 40248722 - 40248813
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    ||||||||| ||| || ||||||||| |||||||| |||| ||||||  | |||||||  | ||||||||| ||||||||||||||||||||    
T  40248722 atgggtaggataacggataagtatatgagaatcggatatgaggacggaaaaggtaaaacccgtccccaccctgccccattgccatgcctact 40248813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 6388945 - 6389035
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatcccca-ccccgccccattgccatgccta 117  Q
    |||||||||||||  ||||||||||| ||| | | ||||||||||||||| |||||||  | |||||| ||||||| ||||||||||||||    
T  6388945 atgggtagggtaacaggtaagtatatgagagtagagtatggggacggggaaggtaaaacccgtccccacccccgcctcattgccatgccta 6389035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 18151148 - 18151083
Alignment:
Q  43 ggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattg 108  Q
    ||||||||||| ||| | |||||||||||| |||| |||||||||| |||||||||| ||||||||    
T  18151148 ggtaagtatatgagagtagggtatggggacagggaaggtaaaattcgtccccaccccaccccattg 18151083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 34776170 - 34776081
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||| |||  ||||| ||||| |||||||||||||| || ||||| |||||||  | |||||| |||||||||||||||| ||||    
T  34776170 atgggtaggttaacaggtaaatatatgagaatcgggtatggagatggggaaggtaaaacccgtccccatcccgccccattgccataccta 34776081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 1063214 - 1063162
Alignment:
Q  31 ggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaa 83  Q
    |||||||||| |||||||||||| |||||||||||||||||| |||| |||||    
T  1063214 ggtagggtaacgggtaagtatatgagaatcgggtatggggacagggaaggtaa 1063162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 24568647 - 24568559
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcct 116  Q
    ||||||||||||| || ||| ||| | |||||||||||||||||| || |  | ||||  | |||||||||||||||||||||||||||    
T  24568647 atgggtagggtaacggataaatatgtgagaatcgggtatggggaccggaaatgcaaaacccgtccccaccccgccccattgccatgcct 24568559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 33633362 - 33633453
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    |||||||||||||   |||||||| |  || | ||||||||||||| ||| |||||||  | |||||| |||||||||||||||||||||||    
T  33633362 atgggtagggtaacatgtaagtatttgggagtagggtatggggacgaggaaggtaaaacccgtccccatcccgccccattgccatgcctact 33633453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 1012339 - 1012250
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||| |||||  ||||||||||| |||||||| |||| ||||||| |  |||||| || |||||||||| ||||||||  |||||||    
T  1012339 atgggtaaggtaacaggtaagtatatgagaatcggatatgaggacgggaaatgtaaaactcgtccccaccccaccccattgtgatgccta 1012250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 17084583 - 17084640
Alignment:
Q  61 gggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    ||||||||||| ||||| |||||||  | |||||||||||||||||| ||||||||||    
T  17084583 gggtatggggatggggaaggtaaaacccgtccccaccccgccccattaccatgcctac 17084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 28345139 - 28345049
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    ||||||||||||| || |||||||   ||| | |||||| |||||||| | |||||||  | || |||||||||||||||||||||||||||    
T  28345139 atgggtagggtaacggataagtattcgagagtagggtatagggacgggaa-ggtaaaacccgtcaccaccccgccccattgccatgcctact 28345049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 4033579 - 4033527
Alignment:
Q  64 tatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||| |||||||||  | ||||||| ||||||||||||||||||    
T  4033579 tatggggacggggaaggtaaaatttgttcccaccc-gccccattgccatgccta 4033527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 17851578 - 17851489
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||| |  ||||||||||||||||||||||||||||    
T  17851578 atgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacttgtccccaccccgccccattgccatgccta 17851489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 5567525 - 5567610
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||  ||||||||||| ||||| ||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  5567525 gtagggtaacaggtaagtatatgagaatagggtatggggacgggggaggtaaaactcatccccaccccgccccattgccatgccta 5567610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 10072201 - 10072112
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||  ||||||||||| ||||||||||||||||| ||||| |||||||  | | ||||||||||||||||||||||||||    
T  10072201 atgggtagggtaacaggtaagtatatgagaatcgggtatggggatggggaaggtaaaacccgttcccaccccgccccattgccatgccta 10072112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 21702392 - 21702303
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||  |||||||||||| ||||||||||||||||| ||||| |||||||  | |||||||||| |||||||||||||||||    
T  21702392 atgggtagggtagcgggtaagtatatgagaatcgggtatggggatggggaaggtaaaacccgtccccacccctccccattgccatgccta 21702303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 25980304 - 25980392
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| |||||||||| ||||||| |||| |||||||  |||||||||||| |||||||||||||||||    
T  25980304 atgggtagggtaacgggtaagtatatgagaatcgggtttggggac-gggaaggtaaaacccatccccaccccaccccattgccatgccta 25980392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 30650343 - 30650254
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| |||||||||||||| || ||||| |||||||  | ||||| ||||||||||||||||||||||    
T  30650343 atgggtagggtaacgggtaagtatatgagaatcgggtatggagatggggaaggtaaaacccgtcccctccccgccccattgccatgccta 30650254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 35074181 - 35074093
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| |||||||||||| || ||||||| |||||||  | ||||||||||||||||||||||||||||    
T  35074181 atgggtagggtaacgggtaagtatatgagaatcgggtat-ggaacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 35074093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 37578972 - 37578887
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||| |||||||||||| | ||||||||||||||| |||||  ||||||| ||||||||||||| ||||||||||||||||    
T  37578972 gtagggtaacgggtaagtatatgataatcgggtatggggatggggaatgtaaaatccatccccaccccgtcccattgccatgccta 37578887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 38140170 - 38140259
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| |||| ||| |||||| ||| ||| ||||||| || ||||||||||||||||||||||||||||    
T  38140170 atgggtagggtaacgggtaagtatatgagaaccggatatgggtacgaggaaggtaaaactcgtccccaccccgccccattgccatgccta 38140259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 38152613 - 38152524
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| ||||||| ||||||| ||||||| |||||||  | ||||||||||||||||||| ||||||||    
T  38152613 atgggtagggtaacgggtaagtatatgagaatcgagtatgggaacggggaaggtaaaacccgtccccaccccgccccattgtcatgccta 38152524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 39316707 - 39316618
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||| ||||| ||||||||||||||| | ||||| |||||||  |||||||||||||| |||||||||||||||    
T  39316707 atgggtagggtaacgggtaaatatatgagaatcgggtatgggaatggggaaggtaaaacccatccccaccccgctccattgccatgccta 39316618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 45886145 - 45886234
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||  ||||||||||| ||||| |||||||| |||||||| |||||||  |||| |||||||||||||||||||||||||    
T  45886145 atgggtagggtaacaggtaagtatatgagaattgggtatggagacggggaaggtaaaacccatctccaccccgccccattgccatgccta 45886234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 3227921 - 3228013
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctactt 120  Q
    ||||||||||||| || |||||| || |||||||| |||||||||||||| |||||||  | ||||||||||||||||||||||| |||||||    
T  3227921 atgggtagggtaacggataagtagatgagaatcggatatggggacggggagggtaaaacccgtccccaccccgccccattgccatacctactt 3228013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 44986280 - 44986368
Alignment:
Q  31 ggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||||| ||||||| || |||||| |||||||||||| ||| ||||||    
T  44986280 ggtagggtaacaggtaagtatatgagaatcgggtatggggacggggaaggtaaaactcgtccccatcccgccccattgtcatacctact 44986368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 7779720 - 7779629
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    |||||||||||||  | ||||||||  ||||||||||||||||||||||| |||||||  | |||||||||| |||||||||||||||||||    
T  7779720 atgggtagggtaacagataagtatacgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccaccccattgccatgcctact 7779629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 10996227 - 10996316
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||| ||||  ||||||||||| ||||| ||||||||||| ||||| |||||||  | ||||||||||||||||||||||||||||    
T  10996227 atgggtagagtaacaggtaagtatatgagaatagggtatggggatggggaaggtaaaacccgtccccaccccgccccattgccatgccta 10996316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 16865882 - 16865793
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| | ||||||||||||||| | ||| |||||||  | |||||||| |||||||||||||||||||    
T  16865882 atgggtagggtaacgggtaagtatatgataatcgggtatggggatgaggaaggtaaaacccgtccccacctcgccccattgccatgccta 16865793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 25905341 - 25905252
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| | |||||||||| |||||| |||||||  ||||||| |||||||  | ||||||||||||||||||||||||||||    
T  25905341 atgggtagggtaacgagtaagtatatgagaatcaggtatggaaacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 25905252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 43507146 - 43507057
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||  ||||||||||| ||||||||||||||| ||||||| |||||||  | |||||||| || ||||||||||||||||    
T  43507146 atgggtagggtaacaggtaagtatatgagaatcgggtatgggaacggggaaggtaaaacccgtccccacctcgtcccattgccatgccta 43507057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 18826250 - 18826338
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||  ||  ||||||  | | ||||||||||||||||||||||||||    
T  18826250 atgggtagggtaacgggtaagtatatgagaatcgggtatggggacgaagaatgtaaaa-cccttcccaccccgccccattgccatgccta 18826338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 18125624 - 18125697
Alignment:
Q  44 gtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||| ||||||||||||||| || |||| |||||||  | |||||||||||| |||||||||||||||    
T  18125624 gtaagtatatgagaatcgggtatgggaacagggaaggtaaaacccgtccccaccccgctccattgccatgccta 18125697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 2632351 - 2632438
Alignment:
Q  31 ggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    |||||||||| |||||||||||| |||||| ||||| ||||||| ||  ||||||  | ||||||||| ||||||||||||||||||||    
T  2632351 ggtagggtaacgggtaagtatatgagaatcaggtat-gggacggagaatgtaaaacccgtccccaccctgccccattgccatgcctact 2632438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 44658637 - 44658709
Alignment:
Q  45 taagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||| | ||||||||| |||||| |||| |||||||  | ||||||||||||||||||||||||||||    
T  44658637 taagtatatgataatcgggtacggggacagggaaggtaaaacccgtccccaccccgccccattgccatgccta 44658709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 16075406 - 16075319
Alignment:
Q  31 ggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatcccca-ccccgccccattgccatgccta 117  Q
    |||||||||  || ||||||||| |||||||| ||||||||||||||  ||||||  | |||||| ||||||||||||||||||||||    
T  16075406 ggtagggtagcggataagtatatgagaatcggatatggggacggggaatgtaaaacccttccccacccccgccccattgccatgccta 16075319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 37196368 - 37196447
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccatt 107  Q
    ||||||||||||| |||||||||||  |||||| |||||| ||||||| | |||||||  | ||||||||||||||||||    
T  37196368 atgggtagggtaacgggtaagtatacgagaatcaggtatgaggacgggaaaggtaaaacccgtccccaccccgccccatt 37196447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 41103353 - 41103267
Alignment:
Q  31 ggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||| ||||||| |||| |||||||||||||||||||| || |||||||    ||||| ||| |||||||||| |||||||    
T  41103353 ggtagggtaacgggtaagcatatgagaatcgggtatggggacggagaaggtaaaacctgtccccgccctgccccattgctatgccta 41103267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 25783281 - 25783365
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatg 113  Q
    |||||||||||||   |||||||||| |||||| ||||||||||| ||||  ||||||||| | ||||||||||||||||| ||||    
T  25783281 atgggtagggtaacatgtaagtatatgagaatcaggtatggggacagggaatgtaaaattcgt-cccaccccgccccattgtcatg 25783365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 33840787 - 33840698
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||  ||||||||||| |||||  || ||||||| || || |||||||  | ||||||||||||||||||||||| ||||    
T  33840787 atgggtagggtaacaggtaagtatatgagaatatggcatggggatggagaaggtaaaacccgtccccaccccgccccattgccataccta 33840698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 39456361 - 39456445
Alignment:
Q  30 gggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||  |||||||||||   |||||| |||| ||||||||| ||||||| || |||||||||  |||||||||||||||||    
T  39456361 gggtagggtaacaggtaagtatat---aatcggatatgaggacggggaaggtaaaactcgtccccaccctaccccattgccatgccta 39456445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 44734739 - 44734819
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattg 108  Q
    ||||||||| ||| || ||||||||| |||||||| ||||| |||||||| | |||||| | || ||||||||||||||||    
T  44734739 atgggtaggataacggataagtatatgagaatcggatatggagacggggaagataaaatccgtcaccaccccgccccattg 44734819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 24425160 - 24425072
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |   |||||||| |||||||| |||||||| |||||  |||||| || ||| ||||||| ||||||||||||||||    
T  24425160 atgggtagggtaacgaacaagtatatgagaatcggatatggggatggggaatgtaaaactcgtcctcaccccg-cccattgccatgccta 24425072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 42908431 - 42908520
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| ||||||||||||   | | ||| ||||||| ||||| || ||||  | ||||||||||||||||||| ||||||||    
T  42908431 atgggtagggtaacgggtaagtatatggaagtaggggatggggatggggaaggcaaaacccgtccccaccccgccccattgtcatgccta 42908520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 3920191 - 3920159
Alignment:
Q  88 catccccaccccgccccattgccatgcctactt 120  Q
    |||||||||||||||||||||||||||||||||    
T  3920191 catccccaccccgccccattgccatgcctactt 3920159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 5298285 - 5298349
Alignment:
Q  183 tcactgatagccatttcaaaagtttgaagtgacccaataagttcttctactttcatgttcttaat 247  Q
    ||||| |||| |||||||||||||||||||||||||||||  ||||  || |||||||| |||||    
T  5298285 tcactaatagtcatttcaaaagtttgaagtgacccaataaactctttaaccttcatgtttttaat 5298349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 45709248 - 45709324
Alignment:
Q  44 gtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctactt 120  Q
    |||| ||||| | ||||| ||||||||||||  | |||||||| | |||||||||| || |||||||||||||||||    
T  45709248 gtaaatatatcataatcgagtatggggacggaaaaggtaaaatccgtccccaccccacctcattgccatgcctactt 45709324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 46127548 - 46127632
Alignment:
Q  33 tagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||  ||||||||||| ||||| |||||||| || |||||  ||||||| | |||  ||||||||||||| |||||||||    
T  46127548 tagggtaacaggtaagtatatgagaattgggtatggagatggggaatgtaaaatccgtccttaccccgccccattaccatgccta 46127632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 117
Target Start/End: Complemental strand, 26068874 - 26068839
Alignment:
Q  82 aaaattcatccccaccccgccccattgccatgccta 117  Q
    |||| |||||||||||||||||||||||||||||||    
T  26068874 aaaactcatccccaccccgccccattgccatgccta 26068839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 117
Target Start/End: Complemental strand, 26093319 - 26093284
Alignment:
Q  82 aaaattcatccccaccccgccccattgccatgccta 117  Q
    |||| |||||||||||||||||||||||||||||||    
T  26093319 aaaactcatccccaccccgccccattgccatgccta 26093284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 4101182 - 4101120
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatcccc 94  Q
    |||| |||||||||||| |||| ||| | ||||||||||||||||| ||||||| || |||||    
T  4101182 gtagagtaatgggtaaggatatgagagtagggtatggggacggggaaggtaaaactcgtcccc 4101120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 5376794 - 5376709
Alignment:
Q  33 tagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    |||||||| |||||||||||| | ||||||||||||| ||||| |   |||| | |||||||||||| || ||||  |||||||||    
T  5376794 tagggtaacgggtaagtatatgataatcgggtatgggaacgggaaatctaaagtccatccccaccccacctcattatcatgcctac 5376709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 29292340 - 29292251
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| || |||| |||| | | | | ||||||| | ||||| |||||||  | ||||||||||| ||||||||||||||||    
T  29292340 atgggtagggtaacggataagcatatgaaagtagagtatgggaatggggaaggtaaaacccgtccccaccccgtcccattgccatgccta 29292251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 37181982 - 37181898
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||  | ||| ||||| |||||||| |||||||||||| | | |||||| | |||||||||||||| |||| ||||||||    
T  37181982 gtagggtaacagataaatatatgagaatcggatatggggacgggaaag-taaaatccgtccccaccccgccctattgtcatgccta 37181898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 41741829 - 41741918
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||| ||| |||||| ||||  |||||||| |||||| || |||| | |||||   || ||||| ||||||||||||||||||||    
T  41741829 atgggtaggataacgggtaaatatacgagaatcggatatgggaacagggaagataaaacctattcccactccgccccattgccatgccta 41741918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 40517515 - 40517426
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  40517515 atgggtagggtaacaggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccatccccaccccgccccattgccatgccta 40517426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 3565100 - 3565186
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcc 115  Q
    ||||||||||||| |||||||||||| |||||||||||||||||| |||| |||||||  | ||||||||||||||||||||||||||    
T  3565100 atgggtagggtaacgggtaagtatatgagaatcgggtatggggac-gggaaggtaaaacccgtccccaccccgccccattgccatgcc 3565186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 15889919 - 15889828
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    |||||||||||||  ||||||||||| |||||||| |||||||| ||||| |||||||  | ||||||||||||||||||||||||||||||    
T  15889919 atgggtagggtaacaggtaagtatatgagaatcggttatggggatggggaaggtaaaacccgtccccaccccgccccattgccatgcctact 15889828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 6156291 - 6156380
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||| |  |||||| ||||||||||||||||||||||    
T  6156291 atgggtagggtaacgggtaagtatataagaaacgggtatggggacggggaaggtaaaacttgtcccca-cccgccccattgccatgcctac 6156380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 17853660 - 17853749
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||||||| |||||||  | ||||||||| | ||||||||||||||||    
T  17853660 atgggtagggtaacaggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccctgacccattgccatgccta 17853749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 1218487 - 1218409
Alignment:
Q  36 ggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgc 114  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||||  | |||||||||||| ||||||||||||    
T  1218487 ggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgctccattgccatgc 1218409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 20973866 - 20973958
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctactt 120  Q
    |||||||||||||  ||||||||||| |||||| | |||||||||||||| |||||||  | |||||||||| ||| ||||||||||||||||    
T  20973866 atgggtagggtaacaggtaagtatataagaatcagttatggggacggggaaggtaaaacccgtccccacccctcccaattgccatgcctactt 20973958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 22695282 - 22695372
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    ||||||||||||| | |||||||||| ||||| |||||| |||||||||| |||||||  | ||||||||||||||||||| ||| |||||    
T  22695282 atgggtagggtaacgagtaagtatatgagaattgggtatagggacggggaaggtaaaacccgtccccaccccgccccattgtcattcctac 22695372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 24207347 - 24207258
Alignment:
Q  29 tgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    |||||||||||| | |||||||||| ||| | || |||||||| | ||| |||||||  |||||||||||||||||||||||||||||||    
T  24207347 tgggtagggtaacgagtaagtatatgagagtaggatatggggatgaggaaggtaaaacccatccccaccccgccccattgccatgcctac 24207258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 38006851 - 38006936
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatg 113  Q
    ||||||||||||| || ||||||||| ||||||||||||||| |||||||  ||||||  | |||||||||| |||||||||||||    
T  38006851 atgggtagggtaacggataagtatataagaatcgggtatgggaacggggaatgtaaaacccgtccccaccccaccccattgccatg 38006936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 33862573 - 33862661
Alignment:
Q  31 ggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    |||||||||| | ||| |||||| |||||||||||||||||||||||  ||||||  | ||||||||||||| ||||| ||||||||||    
T  33862573 ggtagggtaacgagtatgtatatgagaatcgggtatggggacggggaatgtaaaacccgtccccaccccgcctcattgtcatgcctact 33862661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 5909065 - 5909120
Alignment:
Q  30 gggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaa 85  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||    
T  5909065 gggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaa 5909120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 30996291 - 30996216
Alignment:
Q  43 ggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    ||||| ||||| ||||||||||||| |||||| || |||||||  | |||||||||||||||||||||||||||||    
T  30996291 ggtaaatatatgagaatcgggtatgaggacggagaaggtaaaacccgtccccaccccgccccattgccatgcctac 30996216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 10126811 - 10126726
Alignment:
Q  31 ggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||| |||| |||||||||||| |||||||||||||   ||||||| ||||||| || ||||||||||||||||||| ||||||||    
T  10126811 ggtagagtaacgggtaagtatatgagaatcgggtatgaaaacgggga-ggtaaaactcgtccccaccccgccccattgtcatgccta 10126726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 119
Target Start/End: Complemental strand, 38972572 - 38972482
Alignment:
Q  29 tgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    |||||||||||| | ||| ||||||  || | ||||||||||||||||| ||||||| || |||||||||| ||||||| |||||||||||    
T  38972572 tgggtagggtaacgagtatgtatatgggagtagggtatggggacggggaaggtaaaactcgtccccaccccaccccattaccatgcctact 38972482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 27088732 - 27088821
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||| ||||||| ||||||||||| ||| |||||  ||||||| | |||||||||  ||||| |||||||||||    
T  27088732 atgggtagggtaacgggtaaatatattaaaatcgggtatgaggaaggggaatgtaaaatccgtccccaccctcccccaatgccatgccta 27088821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 35311521 - 35311436
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||| ||| |||||||||||| |||||||| |||||||| || || |||||||| | ||| ||||||| ||||||||||||||||    
T  35311521 gtaggataacgggtaagtatatgagaatcggatatggggatggagaaggtaaaatccgtccgcaccccgtcccattgccatgccta 35311436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 4582906 - 4582839
Alignment:
Q  50 atattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||| ||||||| |||||| |||||||| |||||||  | ||||||||||||||||||||||||||||    
T  4582906 atatgagaatcgagtatggagacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 4582839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 6093486 - 6093580
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctacttca 122  Q
    |||||||||||||   |||||||||| |||||||||||||  || ||||| | |||||  | |||||| ||||||||||||||||||||| ||||    
T  6093486 atgggtagggtaacaagtaagtatatgagaatcgggtatgaagatggggaagataaaacccgtccccatcccgccccattgccatgcctaattca 6093580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 13402387 - 13402473
Alignment:
Q  31 ggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||| |||||||||||| |||||| | |||||||||||| | ||||||||   |||||||  || ||||||||||||||||    
T  13402387 ggtagggtaacgggtaagtatataagaatcagatatggggacgggaaaggtaaaatctgtccccacttcgtcccattgccatgccta 13402473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 42987862 - 42987947
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctactt 120  Q
    |||| |||| |||||||||||  ||||||||||||||||||||||| ||||| |  | ||||||||   ||||||||||||||||||||    
T  42987862 gtagcgtaacgggtaagtatacgagaatcgggtatggggacggggaaggtaatacccgtccccacc---ccccattgccatgcctactt 42987947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 6369402 - 6369313
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| ||||||| ||||| | ||||  | ||||||  || ||||||||||||||||||  ||||||||    
T  6369402 atgggtagggtaacgggtaagtatatgagaatcgagtatgagaacggaaaaggtaaagctcgtccccaccccgccccattatcatgccta 6369313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 12447090 - 12447002
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||| ||||| ||||||||||||  ||||| | ||||||||||||||  ||||||  | |||||| |||||||||||||||||||||    
T  12447090 atgggtaaggtaacgggtaagtatatgtgaatcagatatggggacggggaatgtaaaacccgtcccca-cccgccccattgccatgccta 12447002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 33420582 - 33420657
Alignment:
Q  45 taagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctactt 120  Q
    |||||||||||||||||| |||||||||| |||  ||||||  | |||| | ||||||||| ||||||||||||||    
T  33420582 taagtatattagaatcggatatggggacgtggaatgtaaaacccgtccctatcccgccccaatgccatgcctactt 33420657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 2413099 - 2413189
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccacc-ccgccccattgccatgccta 117  Q
    |||||||||||||  | ||||||||| |||||||| |||| |||||| ||  |||||| || |||||||| ||||||||||| ||||||||    
T  2413099 atgggtagggtaacagataagtatataagaatcggatatgaggacggagaatgtaaaactcgtccccacctccgccccattgtcatgccta 2413189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 119
Target Start/End: Original strand, 27900875 - 27900933
Alignment:
Q  61 gggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    ||||||||||||||  |  ||||||| | ||||||||||||||||||||||||||||||    
T  27900875 gggtatggggacggaaaatgtaaaatccgtccccaccccgccccattgccatgcctact 27900933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 23045394 - 23045483
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| ||||||||||||  || | ||| ||||||| ||||| |  ||||  | |||||||||||||||||| |||||||||    
T  23045394 atgggtagggtaacgggtaagtatatgggagtaggggatggggatggggaagacaaaacccgtccccaccccgccccattaccatgccta 23045483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 28045360 - 28045271
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||  ||||||||||| |||||||  |||||||| ||| | |||||||  | |||||||| ||| |||||| ||||||||    
T  28045360 atgggtagggtaacaggtaagtatatgagaatcgaatatggggatgggaaaggtaaaacccgtccccaccgcgcaccattgtcatgccta 28045271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 3572915 - 3572843
Alignment:
Q  45 taagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||| |||||| |||||||||||||  |  |||||| ||||||||||| | |||||||| ||||||||    
T  3572915 taagtatatgagaatcaggtatggggacggaaaatgtaaaactcatccccacctcaccccattgtcatgccta 3572843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 10822927 - 10823006
Alignment:
Q  36 ggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcct 116  Q
    ||||| |||||||||||| | ||| || |||||||| ||||| |||||||  | ||||||||||||||||||| |||||||    
T  10822927 ggtaacgggtaagtatatgataataggatatggggatgggga-ggtaaaaaccgtccccaccccgccccattgtcatgcct 10823006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 12235891 - 12235800
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    ||||||||||||| |||||| |||||  || | ||| || |||| ||||| || ||||  | | ||||||||||||||||||||||||||||    
T  12235891 atgggtagggtaacgggtaaatatatgggagtaggggatagggatggggaaggcaaaacccgttcccaccccgccccattgccatgcctact 12235800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 12866933 - 12867024
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    |||| |||| ||| || ||||||||| ||||||| |||| || ||||||| ||||||   | |||| ||||||||||||||||||| |||||    
T  12866933 atggataggataacggataagtatatgagaatcgagtataggaacggggaaggtaaaccccgtcccaaccccgccccattgccatgtctact 12867024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 2680904 - 2680814
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    ||||||||||||| ||||| ||||||  |||| ||  ||||||| ||||| || ||||  | ||||||||||||| ||||||||| |||||    
T  2680904 atgggtagggtaacgggtaggtatatgggaataggagatggggatggggaaggcaaaacccgtccccaccccgccgcattgccatacctac 2680814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 12457163 - 12457085
Alignment:
Q  29 tgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccatt 107  Q
    ||||||||||||   ||| |||||| ||||| |||||||| |||  ||| ||||||| |||||| ||||||||||||||    
T  12457163 tgggtagggtaacaagtatgtatatgagaatagggtatggagacatggaaggtaaaactcatcctcaccccgccccatt 12457085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 4920540 - 4920483
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaa 85  Q
    ||||||||||||| |||||||||||| | |||||||||| ||||  |||| |||||||    
T  4920540 atgggtagggtaacgggtaagtatatgataatcgggtatagggatagggaaggtaaaa 4920483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 14524 - 14614
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||||||  ||||||| | |||||||||||||||||||||||||||||    
T  14524 atgggtagggtaacaggtaagtatatgagaatcgggtatggggacggggaatgtaaaatccgtccccaccccgccccattgccatgcctac 14614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 3966 - 3877
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||||  |||| ||||| |||||||||||||||||||| || |||||||| | ||||||||| ||||||||||||||||||    
T  3966 atgggtagggtaataagtaaatatatgagaatcgggtatggggacggagaaggtaaaatccgtccccacccggccccattgccatgccta 3877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 33103 - 33014
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    ||||||||||||| |||||||||||| |||||| ||||||||||||||||  ||||||    ||||||||||||||||||||||||||||    
T  33103 atgggtagggtaacgggtaagtatatgagaatcaggtatggggacggggaatgtaaaacctgtccccaccccgccccattgccatgccta 33014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 32904 - 32996
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctactt 120  Q
    ||||||||||||| |||||||||||| |||||| ||||||||||||| || ||||||| || ||||||||||||||||||  |||| ||||||    
T  32904 atgggtagggtaacgggtaagtatatgagaatcaggtatggggacggagaaggtaaaactcgtccccaccccgccccattatcatgtctactt 32996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 199173 - 199262
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||||||||||||  ||||||||||| |||||| ||||||||||||||||  ||||||  | |||||||||||||||||| |||||||||    
T  199173 atgggtagggtaactggtaagtatatgagaatctggtatggggacggggaatgtaaaacccgtccccaccccgccccattaccatgccta 199262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 199056 - 199103
Alignment:
Q  31 ggtagggtaatgggtaagtatattagaatcgggtatggggacggggat 78  Q
    |||||||||| ||||||||| || ||||||||||||||||| ||||||    
T  199056 ggtagggtaacgggtaagtacatgagaatcgggtatggggatggggat 199103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 35858 - 35775
Alignment:
Q  32 gtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcc 115  Q
    ||||||||| ||| ||||||||  ||||||||||||||||||||||   ||||| || ||| |||||||||||| |||||||||    
T  35858 gtagggtaacgggcaagtatatgtgaatcgggtatggggacggggaatataaaactcgtcctcaccccgccccaatgccatgcc 35775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 3750 - 3807
Alignment:
Q  62 ggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgcctact 119  Q
    |||||||||||||||| |||||||  | ||||||||||||| ||||||||||||||||    
T  3750 ggtatggggacggggaaggtaaaacccgtccccaccccgcctcattgccatgcctact 3807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1630 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1630
Description:

Target: scaffold1630; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 1331 - 1242
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||| ||||||||  | ||||||||| |||||| |  ||||||||||||| |||||||  | |||||||||| ||| |||||||||||||    
T  1331 atggatagggtaacagataagtatatgagaatcagacatggggacggggaaggtaaaacccgtccccaccccacccaattgccatgccta 1242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 90305 - 90216
Alignment:
Q  28 atgggtagggtaatgggtaagtatattagaatcgggtatggggacggggatggtaaaattcatccccaccccgccccattgccatgccta 117  Q
    |||| |||||||| |||||||||||| |||||| ||||||  ||||| ||  ||||||  | |||||| ||| |||||||||||||||||    
T  90305 atggatagggtaacgggtaagtatatgagaatcaggtatgctgacggagaatgtaaaacccgtccccatcccaccccattgccatgccta 90216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 128526 - 128577
Alignment:
Q  67 ggggacggggatggtaaaattcatccccaccccgccccattgccatgcctac 118  Q
    ||||| ||||| || |||| || |||||||||||||||||||||||||||||    
T  128526 ggggatggggaaggcaaaactcgtccccaccccgccccattgccatgcctac 128577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 118
Target Start/End: Original strand, 105942 - 105970
Alignment:
Q  90 tccccaccccgccccattgccatgcctac 118  Q
    |||||||||||||||||||||||||||||    
T  105942 tccccaccccgccccattgccatgcctac 105970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 118
Target Start/End: Complemental strand, 69710 - 69682
Alignment:
Q  90 tccccaccccgccccattgccatgcctac 118  Q
    |||||||||||||||||||||||||||||    
T  69710 tccccaccccgccccattgccatgcctac 69682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University