View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21048_low_19 (Length: 222)
Name: NF21048_low_19
Description: NF21048
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21048_low_19 |
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Alignment Details
Target: chr4 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 68 - 203
Target Start/End: Original strand, 32672698 - 32672833
Alignment:
| Q |
68 |
taaggaagaattacgattaccttcgagaagggaaaatctgttgttgtctcctcaacatcacacaaaatcaccctccagcaagaaggcggtacaaaactcc |
167 |
Q |
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| T |
32672698 |
taaggaagaattacgattaccttcgagaagggaaaatctgttgttgtctcctcaatatcacacaaaatcaccctccagcaagaaggcggtacaaaactcc |
32672797 |
T |
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| Q |
168 |
acagttgtaaaatccaatgagactcaatcagcaacc |
203 |
Q |
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||||||||||||| | |||||||||||||||||||| |
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| T |
32672798 |
acagttgtaaaatgcgatgagactcaatcagcaacc |
32672833 |
T |
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