View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2104R-Insertion-11 (Length: 392)

Name: NF2104R-Insertion-11
Description: NF2104R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2104R-Insertion-11
NF2104R-Insertion-11
[»] chr8 (11 HSPs)
chr8 (8-392)||(24801217-24801580)
chr8 (138-392)||(24800343-24800598)
chr8 (148-260)||(12230929-12231042)
chr8 (148-278)||(33327523-33327656)
chr8 (326-385)||(31518455-31518515)
chr8 (138-279)||(33545555-33545697)
chr8 (322-389)||(33327698-33327766)
chr8 (281-345)||(33545746-33545810)
chr8 (148-213)||(31518148-31518214)
chr8 (181-279)||(375400-375498)
chr8 (326-367)||(12231284-12231326)
[»] chr5 (9 HSPs)
chr5 (140-392)||(7014902-7015155)
chr5 (147-278)||(31813149-31813281)
chr5 (135-261)||(20506710-20506837)
chr5 (138-279)||(33270738-33270887)
chr5 (85-167)||(1494274-1494356)
chr5 (145-213)||(21946757-21946826)
chr5 (339-392)||(7014873-7014926)
chr5 (155-277)||(10735308-10735431)
chr5 (280-356)||(1494641-1494717)
[»] chr4 (14 HSPs)
chr4 (87-392)||(24778058-24778364)
chr4 (138-389)||(4947508-4947760)
chr4 (145-278)||(53019592-53019726)
chr4 (145-278)||(54349545-54349679)
chr4 (138-278)||(39162792-39162933)
chr4 (145-278)||(35801761-35801895)
chr4 (145-278)||(5555582-5555716)
chr4 (148-278)||(46611928-46612059)
chr4 (148-260)||(12571484-12571597)
chr4 (145-261)||(55440918-55441035)
chr4 (322-392)||(53019768-53019839)
chr4 (327-392)||(46611816-46611881)
chr4 (322-379)||(5555758-5555816)
chr4 (8-64)||(24778366-24778422)
[»] chr1 (13 HSPs)
chr1 (89-278)||(46887192-46887382)
chr1 (87-279)||(26051316-26051509)
chr1 (145-274)||(43043100-43043230)
chr1 (145-278)||(46889213-46889347)
chr1 (139-279)||(26049269-26049410)
chr1 (280-367)||(20059935-20060022)
chr1 (135-213)||(30786674-30786753)
chr1 (136-213)||(20063198-20063275)
chr1 (280-367)||(20062989-20063076)
chr1 (87-160)||(20061465-20061538)
chr1 (172-233)||(20060124-20060185)
chr1 (138-213)||(36729371-36729447)
chr1 (322-392)||(43043279-43043357)
[»] chr2 (14 HSPs)
chr2 (85-278)||(10376946-10377140)
chr2 (138-278)||(11105434-11105575)
chr2 (145-278)||(36558543-36558674)
chr2 (145-278)||(19259286-19259420)
chr2 (145-278)||(27614253-27614387)
chr2 (278-363)||(22615470-22615555)
chr2 (145-278)||(10374463-10374597)
chr2 (327-392)||(27614140-27614206)
chr2 (321-392)||(36561677-36561749)
chr2 (322-392)||(19259170-19259241)
chr2 (327-392)||(10377187-10377253)
chr2 (18-73)||(10376900-10376955)
chr2 (145-278)||(24574361-24574494)
chr2 (322-392)||(24574248-24574319)
[»] chr7 (3 HSPs)
chr7 (148-278)||(218402-218533)
chr7 (145-278)||(4588270-4588404)
chr7 (322-389)||(218575-218643)
[»] chr3 (13 HSPs)
chr3 (152-278)||(43543730-43543857)
chr3 (278-363)||(16467779-16467864)
chr3 (145-272)||(39944864-39944985)
chr3 (138-279)||(25484782-25484923)
chr3 (327-392)||(43543617-43543683)
chr3 (320-392)||(49021269-49021342)
chr3 (187-279)||(17767668-17767760)
chr3 (187-279)||(19068969-19069061)
chr3 (327-389)||(39944748-39944811)
chr3 (87-161)||(1255684-1255758)
chr3 (157-278)||(49021382-49021504)
chr3 (326-368)||(1257880-1257922)
chr3 (325-367)||(25484639-25484681)
[»] scaffold0316 (1 HSPs)
scaffold0316 (145-261)||(11279-11396)
[»] scaffold0007 (1 HSPs)
scaffold0007 (136-213)||(197678-197754)


Alignment Details
Target: chr8 (Bit Score: 261; Significance: 1e-145; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 8 - 392
Target Start/End: Original strand, 24801217 - 24801580
Alignment:
Q  8 acttctgatgaagtggtcgaagaagaccagacaattttcatttttggtattatgttttaaaatgttgtttctcgaaattaaaatgttattcctctcatgt 107  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||                     ||||||||||||||||||||    
T  24801217 acttctgatgaagtggtcgaagaagaccagacaatttttatttttggtattatgtttta---------------------aaatgttattcctctcatgt 24801295  T
Q  108 ctttcgagaaacaacattttgagaggcctctgttagtaccaaaaatgaaatatttggtctaacccatgattatatttcgacaaggcagatgggttatttc 207  Q
    |||||||||||||||||||| || ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  24801296 ctttcgagaaacaacatttttaggggcctttgttagtaccgaaaatgaaatatttggtctaacccatgattatatttcgataaggcagatgtgttatttc 24801395  T
Q  208 gacatgaagcaaagcgcaaagggatatcaaccaataacatacagacttcgacacaccgcaatttcgaccaaggaagttaaagttggagcgcaataagaca 307  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24801396 gacatgaagcaaagtgcaaagggatatcaaccaataacatacagatttcgacacaccgcaatttcgaccaatgaagttaaagttggagcgcaataagaca 24801495  T
Q  308 atgtgaaacgtgtagcggcaaacaaggctgaagtgcattgaagttatttcctagtgtcttggtgcatggaagttattttctagtg 392  Q
    | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  24801496 aagtggaacgtgtagcggcaaacaaggctgaagtgcattgaagttatttcctagtgtcttagtgcatgaaagttattttctagtg 24801580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 138 - 392
Target Start/End: Original strand, 24800343 - 24800598
Alignment:
Q  138 tgttagtaccaaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatca 236  Q
    ||||||||||| |||| |||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||||||||  |||||| | |||||||| ||     
T  24800343 tgttagtaccacaaataaaatatttggtcgaactcatgattatattttcgacaaggcaaatgggttatttcgacatgctgcaaagtgtaaagggatttcg 24800442  T
Q  237 accaataacatacagacttcgacacaccgcaatttcgaccaaggaagttaaagttggagcgcaataagacaatgtgaaacgtgtagcggcaaacaaggct 336  Q
    | |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||| |    
T  24800443 atcaataacatacagacttcgacacaccacaatttcgtccaaggaagttaaagttggagtgcaataagaaaaagtgaaacgtgtagcggcaaacaaggtt 24800542  T
Q  337 gaagtgcattgaagttatttcctagtgtcttggtgcatggaagttattttctagtg 392  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| |||||    
T  24800543 gaagtgcattgaagttatttcctattgtcttaatgcatggaagttattttatagtg 24800598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 148 - 260
Target Start/End: Original strand, 12230929 - 12231042
Alignment:
Q  148 aaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaataaca 246  Q
    |||||| |||||||||||| ||| ||| ||| ||||| |||||||||||||| ||||||||||||||  |||||| |||||| ||| || ||||| ||||    
T  12230929 aaaaataaaatatttggtcgaactcataattctattttcgacaaggcagatgtgttatttcgacatgctgcaaagtgcaaagagatttcgaccaagaaca 12231028  T
Q  247 tacagacttcgaca 260  Q
    ||||||||||||||    
T  12231029 tacagacttcgaca 12231042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 148 - 278
Target Start/End: Original strand, 33327523 - 33327656
Alignment:
Q  148 aaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaataac- 245  Q
    ||||||||||||||||||| ||| ||||||| ||||| | |||||| | || |||||||||||||||  |||||| |||||||||| || | |||||||     
T  33327523 aaaaatgaaatatttggtcgaactcatgattctattttcaacaaggtaaataggttatttcgacatgctgcaaagtgcaaagggatttcgatcaataaca 33327622  T
Q  246 -atacagacttcgacacaccgcaatttcgaccaa 278  Q
     ||||||||||||||| || |||||||| |||||    
T  33327623 tatacagacttcgacatacggcaatttcaaccaa 33327656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 385
Target Start/End: Original strand, 31518455 - 31518515
Alignment:
Q  326 caaacaaggctgaagtgcattgaag-ttatttcctagtgtcttggtgcatggaagttattt 385  Q
    |||||||||||  |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  31518455 caaacaaggctttagtgcattgaagattatttcctagtgtcttagtgcatggaagttattt 31518515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 279
Target Start/End: Original strand, 33545555 - 33545697
Alignment:
Q  138 tgttagtaccaaaaatgaaatatttggtctaacccatgattat-atttcgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatca 236  Q
    ||||| |||||||||| | |||||||||| ||  |||||| |  ||||||||||| || ||  ||||||||||||||  |||||| |||||||||| ||     
T  33545555 tgttaataccaaaaataagatatttggtcgaaatcatgatcaagatttcgacaagccatatatgttatttcgacatgctgcaaagtgcaaagggatttcg 33545654  T
Q  237 accaataacatacagacttcgacacaccgcaatttcgaccaag 279  Q
    ||||| | |||||| |||| |||| || |||||| ||||||||    
T  33545655 accaagagcatacaaactttgacatactgcaattccgaccaag 33545697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 322 - 389
Target Start/End: Original strand, 33327698 - 33327766
Alignment:
Q  322 gcggcaaacaaggctgaagtgcattgaag-ttatttcctagtgtcttggtgcatggaagttattttcta 389  Q
    |||| |||||| | |||| |||||||||| ||||||||||||||||| ||||||||||| |||||||||    
T  33327698 gcgggaaacaatgttgaaatgcattgaagattatttcctagtgtcttagtgcatggaagatattttcta 33327766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 33545746 - 33545810
Alignment:
Q  281 aagttaaagttggagcgcaataagacaatgtgaaacgtgtagcggcaaacaaggctgaagtgcat 345  Q
    |||||| |||||||| |||||||| ||  ||||||||||||||||||||||| | ||||||||||    
T  33545746 aagttacagttggagtgcaataaggcagagtgaaacgtgtagcggcaaacaatgttgaagtgcat 33545810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 31518148 - 31518214
Alignment:
Q  148 aaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatg 213  Q
    |||||||||||||||  || |||  |||||| ||||| |||||||||||||||||||||||||||||    
T  31518148 aaaaatgaaatattttatcgaacttatgattctattttcgacaaggcagatgggttatttcgacatg 31518214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 279
Target Start/End: Original strand, 375400 - 375498
Alignment:
Q  181 atttcgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaataacatacagacttcgacacaccgcaatttcgaccaag 279  Q
    |||| |||||| |||| | ||||||||||||||  |||||| |||||| ||| || ||||| |  ||||| | ||||||| ||||||||||||| ||||    
T  375400 attttgacaagtcagaagagttatttcgacatgctgcaaagtgcaaagagatttcgaccaagagtatacatatttcgacataccgcaatttcgatcaag 375498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 367
Target Start/End: Original strand, 12231284 - 12231326
Alignment:
Q  326 caaacaaggctgaagtgcattgaag-ttatttcctagtgtctt 367  Q
    |||||||| |||||||||||||||| |||||||||||||||||    
T  12231284 caaacaagactgaagtgcattgaagattatttcctagtgtctt 12231326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 166; Significance: 1e-88; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 140 - 392
Target Start/End: Complemental strand, 7015155 - 7014902
Alignment:
Q  140 ttagtaccaaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaac 238  Q
    ||||||||||||| ||| ||||||||| ||  ||||||||||||| |||||||||||||||||||||||||||||  |||||| | |||||||| |  ||    
T  7015155 ttagtaccaaaaaggaattatttggtcgaattcatgattatattttcgacaaggcagatgggttatttcgacatgctgcaaagtgtaaagggattttgac 7015056  T
Q  239 caataacatacagacttcgacacaccgcaatttcgaccaaggaagttaaagttggagcgcaataagacaatgtgaaacgtgtagcggcaaacaaggctga 338  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||| ||| ||||||||||| |||||||| ||||    
T  7015055 caataacatacagacttcgacacaccgcaatttcgatcaaggaagttaaagttggagtgcaataaggcaaagtggaacgtgtagcgacaaacaagactga 7014956  T
Q  339 agtgcattgaagttatttcctagtgtcttggtgcatggaagttattttctagtg 392  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7014955 agtgcattgaagttatttcctagtgtcttagtgcatggaagttattttctagtg 7014902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 147 - 278
Target Start/End: Original strand, 31813149 - 31813281
Alignment:
Q  147 caaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaataac 245  Q
    |||||||||||||||||||| ||| || |||||| ||| |||||||||| ||||||||||||||||||  |||||| |||||| ||| || ||||| | |    
T  31813149 caaaaatgaaatatttggtcgaactcacgattatgttttcgacaaggcaaatgggttatttcgacatgttgcaaagtgcaaagagatttcgaccaagagc 31813248  T
Q  246 atacagacttcgacacaccgcaatttcgaccaa 278  Q
    ||||||||||||| | |||||||||||||||||    
T  31813249 atacagacttcgatataccgcaatttcgaccaa 31813281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 135 - 261
Target Start/End: Original strand, 20506710 - 20506837
Alignment:
Q  135 ctctgttagtaccaaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggata 233  Q
    ||||||||  |||||||||||||||||||||| |||  |||||||| ||| |||||||||||||| ||||||||||||||  |||||| ||||||||||     
T  20506710 ctctgttaacaccaaaaatgaaatatttggtcgaactaatgattatgttttcgacaaggcagatgtgttatttcgacatgctgcaaagtgcaaagggatt 20506809  T
Q  234 tcaaccaataacatacagacttcgacac 261  Q
    || ||||| | ||| | |||||||||||    
T  20506810 tcgaccaagagcatgcggacttcgacac 20506837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 138 - 279
Target Start/End: Original strand, 33270738 - 33270887
Alignment:
Q  138 tgttagtaccaaaaatgaaatatttggtctaacccatgattatatttcgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggata---- 233  Q
    ||||| |||||||||| ||||| |||||| ||| |||||||||||||||||||| || ||||||| ||||||||||   ||||| |||||| ||||        
T  33270738 tgttaataccaaaaataaaatacttggtcgaactcatgattatatttcgacaagccatatgggttctttcgacatgctccaaagtgcaaagagataccgc 33270837  T
Q  234 ----tcaaccaataacatacagacttcgacacaccgcaatttcgaccaag 279  Q
        || ||||| |||| ||| ||||||||||||||||||||||||||||    
T  33270838 aatttcgaccaagaacacacatacttcgacacaccgcaatttcgaccaag 33270887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 1494274 - 1494356
Alignment:
Q  85 ttaaaatgttattcctctcatgtctttcgagaaacaacattttgagaggcctctgttagtaccaaaaatgaaatatttggtct 167  Q
    ||||||||||||||||||| | |||||||| ||||||||||||| | ||||||||||| ||| |||||| ||||| |||||||    
T  1494274 ttaaaatgttattcctctcctttctttcgaaaaacaacattttgggtggcctctgttaatacaaaaaataaaatacttggtct 1494356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 21946757 - 21946826
Alignment:
Q  145 accaaaaatgaaatatttggtctaacccatgattat-atttcgacaaggcagatgggttatttcgacatg 213  Q
    |||||||||||||||||||||| ||| |||||||||  |||||| |||||||||||||||||||||||||    
T  21946757 accaaaaatgaaatatttggtcgaactcatgattatgttttcgataaggcagatgggttatttcgacatg 21946826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 339 - 392
Target Start/End: Complemental strand, 7014926 - 7014873
Alignment:
Q  339 agtgcattgaagttatttcctagtgtcttggtgcatggaagttattttctagtg 392  Q
    ||||||| |||||||||| |||||||||| ||||||||||||||||||||||||    
T  7014926 agtgcatggaagttattttctagtgtcttagtgcatggaagttattttctagtg 7014873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 10735431 - 10735308
Alignment:
Q  155 aaatatttggtctaacccatgattatatttc-gacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaataacatacagac 253  Q
    |||||||||||  ||  |||||||||||||  ||||||||||||| |||||||| |||||  ||||||  ||||| ||| || ||||| |||||| ||||    
T  10735431 aaatatttggttgaaatcatgattatatttttgacaaggcagatgagttatttcaacatgctgcaaagtacaaagagatttcgaccaagaacataaagac 10735332  T
Q  254 ttcgacacaccgcaatttcgacca 277  Q
    || |||| ||||||||||| ||||    
T  10735331 tttgacataccgcaatttcaacca 10735308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 356
Target Start/End: Original strand, 1494641 - 1494717
Alignment:
Q  280 gaagttaaagttggagcgcaataagacaatgtgaaacgtgtagcggcaaacaaggctgaagtgcattgaagttattt 356  Q
    ||||||| | |||||| |||||||| ||| ||| | || || |||||||||||||||| || |||| ||||||||||    
T  1494641 gaagttacaattggagtgcaataaggcaaagtggagcgcgtggcggcaaacaaggctggagggcatggaagttattt 1494717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 163; Significance: 6e-87; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 87 - 392
Target Start/End: Complemental strand, 24778364 - 24778058
Alignment:
Q  87 aaaatgttattcctctcatgtctttcgagaaacaacattttgagaggcctctgttagtaccaaaaatgaaatatttggtctaacccatgattata-tttc 185  Q
    ||||||||||||||||||||||||| ||||||||||||||| || | ||||||||||||||||||||||||||||||||| ||   ||||||||| |||     
T  24778364 aaaatgttattcctctcatgtcttttgagaaacaacattttaagggacctctgttagtaccaaaaatgaaatatttggtcgaaattatgattataattta 24778265  T
Q  186 gacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaataacatacagacttcgacacaccgcaatttcgaccaaggaagtt 285  Q
    ||||| |||||||  || ||||||||||  |||||| | |||||||| || || ||||||||||||||||||||||||  ||||||||||||||||| ||    
T  24778264 gacaacgcagatgatttttttcgacatgctgcaaagtgaaaagggatttcgactaataacatacagacttcgacacactacaatttcgaccaaggaaatt 24778165  T
Q  286 aaagttggagcgcaataagacaatgtgaaacgtgtagcggcaaacaaggctgaagtgcattgaagttatttcctagtgtcttggtgcatggaagttattt 385  Q
    |||||| ||| |||||||| ||| ||| |||||||| ||||||| | | |||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  24778164 aaagttagagtgcaataaggcaaagtggaacgtgtaacggcaaagacgactgaggtgcattgaagttatttcctagtgtcttagtgcatggaagttattt 24778065  T
Q  386 tctagtg 392  Q
    |||||||    
T  24778064 tctagtg 24778058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 138 - 389
Target Start/End: Complemental strand, 4947760 - 4947508
Alignment:
Q  138 tgttagtaccaaaaatgaaatatttggtctaacccatgattatatttc-gacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatca 236  Q
    ||||||||||||||||||||||||| ||| ||| ||| |||||||||  |||||| |||||| ||||||| ||||||  || |||  |||||| || ||     
T  4947760 tgttagtaccaaaaatgaaatattttgtcgaactcataattatatttttgacaagacagatgagttattttgacatgctgcgaagtccaaaggaatttcg 4947661  T
Q  237 accaataacatacagacttcgacacaccgcaatttcgaccaaggaagttaaagttggagcgcaataagacaatgtgaaacgtgtagcggcaaacaaggct 336  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||| ||| ||| ||||||||||||||||||||| |    
T  4947660 accaataacatacagacttcgacacaccgcaatttcgatcaaggaagttaaagttggagtgcagtaaggcaaagtggaacgtgtagcggcaaacaaggtt 4947561  T
Q  337 gaagtgcattgaagttatttcctagtgtcttggtgcatggaagttattttcta 389  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  4947560 gaagtgcattgtagttatttcctagtgtcttagtgcatggaagttattttcta 4947508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 145 - 278
Target Start/End: Original strand, 53019592 - 53019726
Alignment:
Q  145 accaaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaata 243  Q
    |||||||||||||||||||||| ||| ||||||| ||||| |||||||||| ||||||||||||||||||  |||||| |||||| ||| || ||||| |    
T  53019592 accaaaaatgaaatatttggtcgaactcatgattctattttcgacaaggcaaatgggttatttcgacatgttgcaaagtgcaaagagatttcgaccaaga 53019691  T
Q  244 acatacagacttcgacacaccgcaatttcgaccaa 278  Q
     ||||||||||||||||||||||||||||||||||    
T  53019692 ccatacagacttcgacacaccgcaatttcgaccaa 53019726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 145 - 278
Target Start/End: Complemental strand, 54349679 - 54349545
Alignment:
Q  145 accaaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaata 243  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||  |||||| |||||| ||| || ||||| |    
T  54349679 accaaaaatgaaatatttggtcgaactcatgattatattttcgacaaggcagatgggttatttcgacatgttgcaaagtgcaaagagatttcgaccaaga 54349580  T
Q  244 acatacagacttcgacacaccgcaatttcgaccaa 278  Q
      ||||||||||||| |||||||||||||||||||    
T  54349579 gtatacagacttcgatacaccgcaatttcgaccaa 54349545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 138 - 278
Target Start/End: Original strand, 39162792 - 39162933
Alignment:
Q  138 tgttagtaccaaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatca 236  Q
    |||||| |||||||||||||||||| ||| ||| ||||||||||||| ||||||||||||| |||||||||||||||  |||||| |||||| ||| ||     
T  39162792 tgttagcaccaaaaatgaaatattttgtcgaactcatgattatattttcgacaaggcagattggttatttcgacatgttgcaaagtgcaaagagatttcg 39162891  T
Q  237 accaataacatacagacttcgacacaccgcaatttcgaccaa 278  Q
    ||||| | |||||||||||||| |||||||||||||||||||    
T  39162892 accaagagcatacagacttcgatacaccgcaatttcgaccaa 39162933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 145 - 278
Target Start/End: Original strand, 35801761 - 35801895
Alignment:
Q  145 accaaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaata 243  Q
    ||||||||||||||||||| || ||| || |||||||||| |||||||| ||||||||||||||||||||  |||||| |||||| ||| || ||||| |    
T  35801761 accaaaaatgaaatatttgatcgaactcacgattatattttcgacaaggtagatgggttatttcgacatgttgcaaagtgcaaagagatttcgaccaaga 35801860  T
Q  244 acatacagacttcgacacaccgcaatttcgaccaa 278  Q
     |||||||||||||| |||||||||||||||||||    
T  35801861 gcatacagacttcgatacaccgcaatttcgaccaa 35801895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 145 - 278
Target Start/End: Original strand, 5555582 - 5555716
Alignment:
Q  145 accaaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaata 243  Q
    |||||||||||||||||||||| |||  |||||||| ||| |||||||||||||| ||||||||||||||  | |||  ||||| |||| |  |||||||    
T  5555582 accaaaaatgaaatatttggtcgaactaatgattatgttttcgacaaggcagatgtgttatttcgacatgctgtaaaatgcaaatggattttgaccaata 5555681  T
Q  244 acatacagacttcgacacaccgcaatttcgaccaa 278  Q
    ||||||| |||||||||||| ||||||||||||||    
T  5555682 acatacatacttcgacacactgcaatttcgaccaa 5555716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 278
Target Start/End: Complemental strand, 46612059 - 46611928
Alignment:
Q  148 aaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaataaca 246  Q
    ||||||||||||||||||| |||  |||||||| ||| ||| |||||||||| |||||||||||| |   ||||| ||||| |||| || ||||||||||    
T  46612059 aaaaatgaaatatttggtcgaacttatgattatgttttcgataaggcagatgagttatttcgacaggctacaaagtgcaaatggatttcgaccaataaca 46611960  T
Q  247 tacagacttcgacacaccgcaatttcgaccaa 278  Q
    | || |||||||||||||||||||||||||||    
T  46611959 tgcatacttcgacacaccgcaatttcgaccaa 46611928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 260
Target Start/End: Complemental strand, 12571597 - 12571484
Alignment:
Q  148 aaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaataaca 246  Q
    ||||||||||||||||||| ||| ||||||| ||||| |||||||| ||||||||||||||||||||  |||||| |||||| ||| || ||||| | ||    
T  12571597 aaaaatgaaatatttggtcgaactcatgattctattttcgacaaggtagatgggttatttcgacatgctgcaaagtgcaaagtgatttcgaccaagagca 12571498  T
Q  247 tacagacttcgaca 260  Q
    ||||||||||||||    
T  12571497 tacagacttcgaca 12571484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 145 - 261
Target Start/End: Original strand, 55440918 - 55441035
Alignment:
Q  145 accaaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaata 243  Q
    |||||||||||||||||||||| ||| || |||||| ||| ||||||||||||||| |||||||||||||  ||||||  ||||||||| || ||||| |    
T  55440918 accaaaaatgaaatatttggtcgaactcacgattatgttttcgacaaggcagatggattatttcgacatgctgcaaagtacaaagggatttcgaccaaga 55441017  T
Q  244 acatacagacttcgacac 261  Q
     ||| | |||||||||||    
T  55441018 gcatgcggacttcgacac 55441035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 322 - 392
Target Start/End: Original strand, 53019768 - 53019839
Alignment:
Q  322 gcggcaaacaaggctgaagtgcattgaag-ttatttcctagtgtcttggtgcatggaagttattttctagtg 392  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||| ||||||| ||||||||||||||||    
T  53019768 gcgggaaacaaggctgaagtgcattgaagattatatcctagtgtcttagtgcatgaaagttattttctagtg 53019839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 327 - 392
Target Start/End: Complemental strand, 46611881 - 46611816
Alignment:
Q  327 aaacaaggctgaagtgcattgaagttatttcctagtgtcttggtgcatggaagttattttctagtg 392  Q
    |||||||||||||||||||||||||||||||||||||| |  || ||||||| |||||| ||||||    
T  46611881 aaacaaggctgaagtgcattgaagttatttcctagtgtttaagtacatggaaattatttcctagtg 46611816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 5555758 - 5555816
Alignment:
Q  322 gcggcaaacaaggctgaagtgcattgaag-ttatttcctagtgtcttggtgcatggaag 379  Q
    |||| ||||||||||||| |||||||||| ||||||||||||||||| |||||||||||    
T  5555758 gcgggaaacaaggctgaaatgcattgaagattatttcctagtgtcttagtgcatggaag 5555816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 24778422 - 24778366
Alignment:
Q  8 acttctgatgaagtggtcgaagaagaccagacaattttcatttttggtattatgttt 64  Q
    ||||||||||||||| ||||||||||||  || || || ||||||||||||||||||    
T  24778422 acttctgatgaagtgatcgaagaagaccgtactatgtttatttttggtattatgttt 24778366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 6e-56; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 89 - 278
Target Start/End: Complemental strand, 46887382 - 46887192
Alignment:
Q  89 aatgttattcctctcatgtctttcgagaaacaacattttgagaggcctctgttagtaccaaaaatgaaatatttggtctaacccatgattat-atttcga 187  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||  |||||||||||||||||||||| |||  ||||||||  ||||||    
T  46887382 aatgttattcctctcatgtctttcgagaaacaacattctgggaggcctctgttaacaccaaaaatgaaatatttggtcgaactaatgattatgttttcga 46887283  T
Q  188 caaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaataacatacagacttcgacacaccgcaatttcgaccaa 278  Q
    ||||||||||| ||||||||||||||  |||||| |||||| ||| || ||||| | |||||||||||||| |||||||||||||||||||    
T  46887282 caaggcagatgagttatttcgacatgttgcaaagtgcaaagagatttcgaccaagagcatacagacttcgatacaccgcaatttcgaccaa 46887192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 87 - 279
Target Start/End: Original strand, 26051316 - 26051509
Alignment:
Q  87 aaaatgttattcctctcatgtctttcgagaaacaacattttgagaggcctctgttagtaccaaaaatgaaatatttggtctaacccatgattata-tttc 185  Q
    ||||||||||| ||||||| | ||||||||||||| |||||| | ||||||||||| ||| |||||| |||||||| ||| ||  |||||||||| ||||    
T  26051316 aaaatgttatttctctcatttttttcgagaaacaatattttgggtggcctctgttaatacaaaaaataaaatattttgtcgaaatcatgattatattttc 26051415  T
Q  186 gacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaataacatacagacttcgacacaccgcaatttcgaccaag 279  Q
    ||||||  ||||| ||| |||||||||   |||||| |||||  ||| || ||||| | |||||||||||||||| || |||||||||||||||    
T  26051416 gacaagttagatgagttttttcgacatattgcaaagtgcaaaaagatttcgaccaagagcatacagacttcgacatactgcaatttcgaccaag 26051509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 145 - 274
Target Start/End: Original strand, 43043100 - 43043230
Alignment:
Q  145 accaaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaata 243  Q
    |||||||||||||||||||||  ||| ||||||||| ||| ||||||||||||||||||||||| |||    |||||| |||||||||| || |||||||    
T  43043100 accaaaaatgaaatatttggtggaactcatgattatgttttcgacaaggcagatgggttatttcaacacactgcaaagtgcaaagggatttcgaccaata 43043199  T
Q  244 acatacagacttcgacacaccgcaatttcga 274  Q
    | | |||||||||||||||||||||||||||    
T  43043200 aaagacagacttcgacacaccgcaatttcga 43043230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 145 - 278
Target Start/End: Complemental strand, 46889347 - 46889213
Alignment:
Q  145 accaaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaata 243  Q
    |||||||||||||||||||||  |||  |||||||| ||| |||||||||||||| ||||||||||||||   ||||| |||||| ||| || ||||| |    
T  46889347 accaaaaatgaaatatttggttgaactaatgattatgttttcgacaaggcagatgagttatttcgacatgtttcaaagtgcaaagagatttcgaccaaga 46889248  T
Q  244 acatacagacttcgacacaccgcaatttcgaccaa 278  Q
     |||||||||||||| |||||||||||||||||||    
T  46889247 gcatacagacttcgatacaccgcaatttcgaccaa 46889213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 139 - 279
Target Start/End: Original strand, 26049269 - 26049410
Alignment:
Q  139 gttagtaccaaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaa 237  Q
    |||| |||||||||| |||||||||||| ||  ||||||||||||| ||| |||  ||||| ||||||||||||||  |||||| ||||||  || || |    
T  26049269 gttaataccaaaaataaaatatttggtcgaaatcatgattatattttcgataagttagatgagttatttcgacatgctgcaaagtgcaaagatatttcga 26049368  T
Q  238 ccaataacatacagacttcgacacaccgcaatttcgaccaag 279  Q
    |||| | |||||| ||||||||| ||||||||||||||||||    
T  26049369 ccaagagcatacaaacttcgacataccgcaatttcgaccaag 26049410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 280 - 367
Target Start/End: Complemental strand, 20060022 - 20059935
Alignment:
Q  280 gaagttaaagttggagcgcaataagacaatgtgaaacgtgtagcggcaaacaaggctgaagtgcattgaagttatttcctagtgtctt 367  Q
    ||||||| |||||| | |||||||| ||| ||| | |||||||| ||||||||||||||||||| | |||||||||||||||||||||    
T  20060022 gaagttacagttggggtgcaataaggcaaagtggagcgtgtagcagcaaacaaggctgaagtgcgtcgaagttatttcctagtgtctt 20059935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 30786753 - 30786674
Alignment:
Q  135 ctctgttagtaccaaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatg 213  Q
    ||||||||  |||||||||||||||||| ||| |||  |||||||||||| |||||||||||||||||||||||||||||    
T  30786753 ctctgttaacaccaaaaatgaaatatttagtcgaacttatgattatattttcgacaaggcagatgggttatttcgacatg 30786674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 20063275 - 20063198
Alignment:
Q  136 tctgttagtaccaaaaatgaaatatttggtctaacccatgattatatttcgacaaggcagatgggttatttcgacatg 213  Q
    ||||||| ||||||||||  ||||||||||| ||  |||||||||||||||||||| ||||| |||||||||||||||    
T  20063275 tctgttaataccaaaaatataatatttggtcgaagtcatgattatatttcgacaagtcagataggttatttcgacatg 20063198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 280 - 367
Target Start/End: Complemental strand, 20063076 - 20062989
Alignment:
Q  280 gaagttaaagttggagcgcaataagacaatgtgaaacgtgtagcggcaaacaaggctgaagtgcattgaagttatttcctagtgtctt 367  Q
    ||||||| ||||| || |||||||| ||| ||| |  ||||||||||||||||||||||||||||| |||||||||| ||| ||||||    
T  20063076 gaagttacagttgaagtgcaataagtcaaagtggagtgtgtagcggcaaacaaggctgaagtgcatggaagttattttctactgtctt 20062989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 20061538 - 20061465
Alignment:
Q  87 aaaatgttattcctctcatgtctttcgagaaacaacattttgagaggcctctgttagtaccaaaaatgaaatat 160  Q
    ||||||||||||||||||| ||||| ||| |||||||||||| | | | |||||||||||||||||| ||||||    
T  20061538 aaaatgttattcctctcatttcttttgaggaacaacattttgggggacttctgttagtaccaaaaataaaatat 20061465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 233
Target Start/End: Complemental strand, 20060185 - 20060124
Alignment:
Q  172 catgattatatttcgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggata 233  Q
    |||||||||||||||||||| || ||| ||||||||||||||  |||||| |||||| ||||    
T  20060185 catgattatatttcgacaagccatatgagttatttcgacatgctgcaaagtgcaaagagata 20060124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 36729371 - 36729447
Alignment:
Q  138 tgttagtaccaaaaatgaaatatttggtctaacccatgattata-tttcgacaaggcagatgggttatttcgacatg 213  Q
    ||||| |||||||||| |||||||||||| ||  |||||||||| |||||| |||  |||||||||||||| |||||    
T  36729371 tgttaataccaaaaataaaatatttggtcgaaatcatgattatattttcgataagttagatgggttatttctacatg 36729447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 392
Target Start/End: Original strand, 43043279 - 43043357
Alignment:
Q  322 gcggcaaacaaggctgaagtgcattgaagtt--------atttcctagtgtcttggtgcatggaagttattttctagtg 392  Q
    |||| |||||||||||||||||||||||| |        ||||||||||| ||| ||||||||||| ||||||||||||    
T  43043279 gcggaaaacaaggctgaagtgcattgaagattatttcctatttcctagtggcttagtgcatggaagatattttctagtg 43043357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 4e-51; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 85 - 278
Target Start/End: Original strand, 10376946 - 10377140
Alignment:
Q  85 ttaaaatgttattcctctcatgtctttcgagaaacaacattttgagaggcctctgttagtaccaaaaatgaaatatttggtctaacccatgattatat-t 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||||||||||||| ||  ||||||| |||      
T  10376946 ttaaaatgttattcctctcatgtctttcgagaaacaacattttggagggcctctgtgaacaccaaaaatgaaatatttggtcgaattcatgattctatcg 10377045  T
Q  184 tcgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaataacatacagacttcgacacaccgcaatttcgaccaa 278  Q
    |||| |||||||||| |||||||||||| |  |||||| ||||| |||| || |||||||||||||| |||||||||||||||||||||||||||    
T  10377046 tcgataaggcagatgagttatttcgacaggctgcaaagtgcaaatggatttcgaccaataacatacatacttcgacacaccgcaatttcgaccaa 10377140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 138 - 278
Target Start/End: Complemental strand, 11105575 - 11105434
Alignment:
Q  138 tgttagtaccaaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatca 236  Q
    ||||| ||| ||||||||||||||||||| ||  ||||||||| ||| |||||||||||||| ||||||||||||||  |||||| |||||||||| ||     
T  11105575 tgttaatacaaaaaatgaaatatttggtcgaaatcatgattatcttttcgacaaggcagatgagttatttcgacatgctgcaaagtgcaaagggatttcg 11105476  T
Q  237 accaataacatacagacttcgacacaccgcaatttcgaccaa 278  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  11105475 accaataacagacagacttcgacacaccgcaatttcgaccaa 11105434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 145 - 278
Target Start/End: Original strand, 36558543 - 36558674
Alignment:
Q  145 accaaaaatgaaatatttggtctaacccatgattatatttcgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaataa 244  Q
    |||||| ||||||||||||||| ||| ||||||||| |  ||||||||||||| ||||||||| |||||  |||||| |||||||||| || ||||||||    
T  36558543 accaaacatgaaatatttggtcgaactcatgattatgt--cgacaaggcagattggttatttcaacatgttgcaaagtgcaaagggatttcgaccaataa 36558640  T
Q  245 catacagacttcgacacaccgcaatttcgaccaa 278  Q
    || |||||||||||||||||||||||||||||||    
T  36558641 caaacagacttcgacacaccgcaatttcgaccaa 36558674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 145 - 278
Target Start/End: Complemental strand, 19259420 - 19259286
Alignment:
Q  145 accaaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaata 243  Q
    |||||||||| |||||||| || ||| ||||||||| ||| |||||||||||||||||||||||||||||  |||||| |||||| ||| || |||||||    
T  19259420 accaaaaatgtaatatttgatcgaactcatgattatgttttcgacaaggcagatgggttatttcgacatgccgcaaagtgcaaagcgatttcgaccaata 19259321  T
Q  244 acatacagacttcgacacaccgcaatttcgaccaa 278  Q
    | | |||||||||| ||||||||||||||||||||    
T  19259320 aaagacagacttcgccacaccgcaatttcgaccaa 19259286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 145 - 278
Target Start/End: Complemental strand, 27614387 - 27614253
Alignment:
Q  145 accaaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaata 243  Q
    ||||||||| |||||||||||| ||| ||||||||| ||| ||||||||||||||||||||||||||| |  | |||| ||||| |||| || |||||||    
T  27614387 accaaaaataaaatatttggtcgaactcatgattatgttttcgacaaggcagatgggttatttcgacaggctgtaaagtgcaaatggatttcgaccaata 27614288  T
Q  244 acatacagacttcgacacaccgcaatttcgaccaa 278  Q
    ||||||| ||||||||| ||| |||||| ||||||    
T  27614287 acatacatacttcgacataccacaatttagaccaa 27614253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 278 - 363
Target Start/End: Original strand, 22615470 - 22615555
Alignment:
Q  278 aggaagttaaagttggagcgcaataagacaatgtgaaacgtgtagcggcaaacaaggctgaagtgcattgaagttatttcctagtg 363  Q
    |||||||||||||||||| |||||||| ||| ||| || |||||||||||||||||||||||||| ||||||||||||| ||||||    
T  22615470 aggaagttaaagttggagtgcaataaggcaaagtggaatgtgtagcggcaaacaaggctgaagtggattgaagttatttactagtg 22615555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 145 - 278
Target Start/End: Original strand, 10374463 - 10374597
Alignment:
Q  145 accaaaaatgaaatatttggtctaacccatgattatatt-tcgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaata 243  Q
    |||||||||||||||||||||| ||  ||||||| |||  |||| |||||| |||||||||||||||| |  |||||| |||||   || || |||||||    
T  10374463 accaaaaatgaaatatttggtcgaattcatgattctatcgtcgataaggcaaatgggttatttcgacaggctgcaaagtgcaaataaatttcgaccaata 10374562  T
Q  244 acatacagacttcgacacaccgcaatttcgaccaa 278  Q
    ||||||| |||||||||||||||||||| ||||||    
T  10374563 acatacatacttcgacacaccgcaattttgaccaa 10374597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 327 - 392
Target Start/End: Complemental strand, 27614206 - 27614140
Alignment:
Q  327 aaacaaggctgaagtgcattgaag-ttatttcctagtgtcttggtgcatggaagttattttctagtg 392  Q
    |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  27614206 aaacaaggctgaagtgcaatgaagattatttcctagtgtcttagtgcatggaagttattttctagtg 27614140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 36561677 - 36561749
Alignment:
Q  321 agcggcaaacaaggctgaagtgcattgaag-ttatttcctagtgtcttggtgcatggaagttattttctagtg 392  Q
    ||||| |||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  36561677 agcgggaaacaaggctaaagtgcattgaagattatttcctagtgtcttagcgcatggaagttattttctagtg 36561749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 322 - 392
Target Start/End: Complemental strand, 19259241 - 19259170
Alignment:
Q  322 gcggcaaacaaggctgaagtgcattgaag-ttatttcctagtgtcttggtgcatggaagttattttctagtg 392  Q
    |||| ||||||| |||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  19259241 gcggaaaacaagactgaagtgcattgaagattatttcctagtgtcttagtgcatggaagatattttctagtg 19259170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 392
Target Start/End: Original strand, 10377187 - 10377253
Alignment:
Q  327 aaacaaggctgaagtgcattgaag-ttatttcctagtgtcttggtgcatggaagttattttctagtg 392  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||| || |||||||||||||    
T  10377187 aaacaaggctaaagtgcattgaagattatttcctagtgtcttggtgcatgaaaattattttctagtg 10377253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 10376900 - 10376955
Alignment:
Q  18 aagtggtcgaagaagaccagacaattttcatttttggtattatgttttaaaatgtt 73  Q
    |||||||||||||||| || ||||| ||||||||||||||||||||||||||||||    
T  10376900 aagtggtcgaagaagatcatacaatattcatttttggtattatgttttaaaatgtt 10376955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 145 - 278
Target Start/End: Complemental strand, 24574494 - 24574361
Alignment:
Q  145 accaaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaata 243  Q
    ||||||||| |||||||||||| |||  |||||||| ||| |||||||||| ||| |||||||||| | |   ||||| |||||  ||| |  |||||||    
T  24574494 accaaaaataaaatatttggtcgaactaatgattatgttttcgacaaggcatatgtgttatttcgataggctacaaagtgcaaatagattttgaccaata 24574395  T
Q  244 acatacagacttcgacacaccgcaatttcgaccaa 278  Q
    |||||||  ||||||||||||||||||| ||||||    
T  24574394 acataca-tcttcgacacaccgcaattttgaccaa 24574361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 392
Target Start/End: Complemental strand, 24574319 - 24574248
Alignment:
Q  322 gcggcaaacaaggctgaagtgcattgaag-ttatttcctagtgtcttggtgcatggaagttattttctagtg 392  Q
    |||| |||||||| | || ||| |||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  24574319 gcgggaaacaaggttcaaatgctttgaagattatttcctagtgtcttagtgcatggaagatattttctagtg 24574248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 2e-37; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 148 - 278
Target Start/End: Original strand, 218402 - 218533
Alignment:
Q  148 aaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaataaca 246  Q
    ||||||||||||||||||| ||| ||||||||| ||| | |||||||||||||||||||||||||||  |||||| |||||||||| || |||||||| |    
T  218402 aaaaatgaaatatttggtcgaactcatgattatgttttcaacaaggcagatgggttatttcgacatgttgcaaagtgcaaagggatttcgaccaataaaa 218501  T
Q  247 tacagacttcgacacaccgcaatttcgaccaa 278  Q
     |||||||||||||||||||||||||||||||    
T  218502 gacagacttcgacacaccgcaatttcgaccaa 218533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 145 - 278
Target Start/End: Original strand, 4588270 - 4588404
Alignment:
Q  145 accaaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaata 243  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||  |||||| |||||| ||| || ||||| |    
T  4588270 accaaaaatgaaatatttggtcgaactcatgattatattttcgacaaggcagatgggttatttcgacatgttgcaaagtgcaaagagatttcgaccaaga 4588369  T
Q  244 acatacagacttcgacacaccgcaatttcgaccaa 278  Q
      ||||| ||||||| |||||||||||||||||||    
T  4588370 gtatacatacttcgatacaccgcaatttcgaccaa 4588404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 322 - 389
Target Start/End: Original strand, 218575 - 218643
Alignment:
Q  322 gcggcaaacaaggctgaagtgcattgaag-ttatttcctagtgtcttggtgcatggaagttattttcta 389  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  218575 gcgggaaacaaggctgaagtgcattgaagattatttcctagtgtcttagtgcatggaagttattttcta 218643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 7e-28; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 152 - 278
Target Start/End: Complemental strand, 43543857 - 43543730
Alignment:
Q  152 atgaaatatttggtctaacccatgattatatt-tcgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaataacataca 250  Q
    ||||||||||||||| ||| | ||||| |||  ||||||||||||||| |||||||||||| |  |||||| ||||| |||| || ||||||||||||||    
T  43543857 atgaaatatttggtcgaactcctgattctatcgtcgacaaggcagatgagttatttcgacaggctgcaaagtgcaaatggatttcgaccaataacataca 43543758  T
Q  251 gacttcgacacaccgcaatttcgaccaa 278  Q
     |||||||||||||||||||||||||||    
T  43543757 tacttcgacacaccgcaatttcgaccaa 43543730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 278 - 363
Target Start/End: Complemental strand, 16467864 - 16467779
Alignment:
Q  278 aggaagttaaagttggagcgcaataagacaatgtgaaacgtgtagcggcaaacaaggctgaagtgcattgaagttatttcctagtg 363  Q
    |||||||||||||||||| |||||||| ||| ||| || |||||||||||||||||||||||||| ||||||||||||| ||||||    
T  16467864 aggaagttaaagttggagtgcaataaggcaaagtggaatgtgtagcggcaaacaaggctgaagtggattgaagttatttactagtg 16467779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 145 - 272
Target Start/End: Complemental strand, 39944985 - 39944864
Alignment:
Q  145 accaaaaatgaaatatttggtctaacccatgattatattt-cgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaata 243  Q
    |||||||||||||||||||||| ||| ||||||||| ||| |||||||||||||||||||||||||||||         |||||||||| |  || ||||    
T  39944985 accaaaaatgaaatatttggtcgaactcatgattatgttttcgacaaggcagatgggttatttcgacatg-------ctgcaaagggatttggacgaata 39944893  T
Q  244 acatacagacttcgacacaccgcaatttc 272  Q
    ||| ||| |||||||||||||||||||||    
T  39944892 acagacaaacttcgacacaccgcaatttc 39944864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 138 - 279
Target Start/End: Complemental strand, 25484923 - 25484782
Alignment:
Q  138 tgttagtaccaaaaatgaaatatttggtctaacccatgattatatttcgacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaa 237  Q
    ||||| ||| ||||||  ||||||||||| ||  ||||||||| |||||| ||| | ||| |||||||||||||||  |||||| | ||||  || || |    
T  25484923 tgttaatacaaaaaatataatatttggtcgaaatcatgattatgtttcgataagtctgataggttatttcgacatgctgcaaagtgtaaagaaatttcga 25484824  T
Q  238 ccaataacatacagacttcgacacaccgcaatttcgaccaag 279  Q
    |||| |||||||||||||||| | ||||||||||||| ||||    
T  25484823 ccaagaacatacagacttcgatataccgcaatttcgatcaag 25484782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 327 - 392
Target Start/End: Complemental strand, 43543683 - 43543617
Alignment:
Q  327 aaacaaggctgaagtgcattgaag-ttatttcctagtgtcttggtgcatggaagttattttctagtg 392  Q
    |||||||||| ||||||||||||| ||||||||||||||||| ||||||| || |||||||||||||    
T  43543683 aaacaaggctaaagtgcattgaagattatttcctagtgtcttagtgcatgaaaattattttctagtg 43543617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 320 - 392
Target Start/End: Complemental strand, 49021342 - 49021269
Alignment:
Q  320 tagcggcaaacaaggctgaagtgcattgaag-ttatttcctagtgtcttggtgcatggaagttattttctagtg 392  Q
    |||||| |||||||||||||||||||||||  |||||| |||||||||| ||||||| ||||||||||| ||||    
T  49021342 tagcggaaaacaaggctgaagtgcattgaaaattattttctagtgtcttagtgcatgaaagttattttccagtg 49021269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 187 - 279
Target Start/End: Complemental strand, 17767760 - 17767668
Alignment:
Q  187 acaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaataacatacagacttcgacacaccgcaatttcgaccaag 279  Q
    ||||| ||||||| |||||||||||||  |||||| |||||||||| || || || |||||||| |||| |||| |||||||||| |||||||    
T  17767760 acaagtcagatggattatttcgacatgttgcaaagtgcaaagggatttcgactaagaacatacaaactttgacataccgcaattttgaccaag 17767668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 187 - 279
Target Start/End: Complemental strand, 19069061 - 19068969
Alignment:
Q  187 acaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaataacatacagacttcgacacaccgcaatttcgaccaag 279  Q
    ||||| ||||||| |||||||||||||  |||||| |||||||||| || || || |||||||| |||| |||| |||||||||| |||||||    
T  19069061 acaagtcagatggattatttcgacatgttgcaaagtgcaaagggatttcgactaagaacatacaaactttgacataccgcaattttgaccaag 19068969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 39944811 - 39944748
Alignment:
Q  327 aaacaaggctgaagtgcattgaag-ttatttcctagtgtcttggtgcatggaagttattttcta 389  Q
    |||||||||||||||||||||||| ||||||||||||||||| || ||| ||||||| ||||||    
T  39944811 aaacaaggctgaagtgcattgaagattatttcctagtgtcttagtccatagaagttagtttcta 39944748  T

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Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 1255684 - 1255758
Alignment:
Q  87 aaaatgttattcctctcatgtctttcgagaaacaacattttgagaggcctctgttagtaccaaaaatgaaatatt 161  Q
    ||||||||||||||| ||| |||||||||||||||||||||  | ||||||||| | |||||||| | |||||||    
T  1255684 aaaatgttattcctcacatttctttcgagaaacaacatttttgggggcctctgtaaataccaaaattaaaatatt 1255758  T

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Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 278
Target Start/End: Complemental strand, 49021504 - 49021382
Alignment:
Q  157 atatttggtctaacccatgattatatttc-gacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaataacatacagactt 255  Q
    |||||||||| |||  |||||||| |||  || |||||||||  ||| |||||||| |  |||||| ||||| |||| || |||||| ||||||| ||||    
T  49021504 atatttggtcgaactaatgattatgtttttgataaggcagatatgttttttcgacaggctgcaaagtgcaaatggatttcgaccaattacatacatactt 49021405  T
Q  256 cgacacaccgcaatttcgaccaa 278  Q
    |||||||| ||||||||||||||    
T  49021404 cgacacactgcaatttcgaccaa 49021382  T

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Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 368
Target Start/End: Original strand, 1257880 - 1257922
Alignment:
Q  326 caaacaaggctgaagtgcattgaagttatttcctagtgtcttg 368  Q
    |||||||| || ||||||||||||||||||| |||||||||||    
T  1257880 caaacaagactaaagtgcattgaagttattttctagtgtcttg 1257922  T

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Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 367
Target Start/End: Complemental strand, 25484681 - 25484639
Alignment:
Q  325 gcaaacaaggctgaagtgcattgaagttatttcctagtgtctt 367  Q
    |||||||||| ||| |||||| |||||||||||||||||||||    
T  25484681 gcaaacaaggttgatgtgcatagaagttatttcctagtgtctt 25484639  T

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Target: scaffold0316 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 145 - 261
Target Start/End: Complemental strand, 11396 - 11279
Alignment:
Q  145 accaaaaatgaaatatttggtctaacccatgattatatttc-gacaaggcagatgggttatttcgacatgaagcaaagcgcaaagggatatcaaccaata 243  Q
    |||||||||||||||||||||| ||| || |||||| |||  |||||||||||||| |||||||||||||  ||||||  ||||||||| || ||||| |    
T  11396 accaaaaatgaaatatttggtcgaactcacgattatgtttttgacaaggcagatggattatttcgacatgctgcaaagtacaaagggatttcgaccaaga 11297  T
Q  244 acatacagacttcgacac 261  Q
     ||| | |||||||||||    
T  11296 gcatgcggacttcgacac 11279  T

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Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 197678 - 197754
Alignment:
Q  136 tctgttagtaccaaaaatgaaatatttggtctaacccatgattatatttcgacaaggcagatgggttatttcgacatg 213  Q
    ||||||| |||||||||| |||||||||||| ||  |||||||||||||||||||  |||||||||| ||||||||||    
T  197678 tctgttaataccaaaaataaaatatttggtcgaagtcatgattatatttcgacaa-ccagatgggttctttcgacatg 197754  T

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