View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2104R-Insertion-2 (Length: 728)
Name: NF2104R-Insertion-2
Description: NF2104R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2104R-Insertion-2 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 602; Significance: 0; HSPs: 35)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 602; E-Value: 0
Query Start/End: Original strand, 8 - 701
Target Start/End: Complemental strand, 22458521 - 22457829
Alignment:
| Q |
8 |
aatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttg |
107 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458521 |
aatcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttg |
22458422 |
T |
|
| Q |
108 |
tccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttattcttgcaaaga |
207 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
22458421 |
tccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttat-cttgcaaaga |
22458323 |
T |
|
| Q |
208 |
tagaaatacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgat |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
22458322 |
tagaaatacatcagaatggtataagtttagtgaaaatctaaatatagagttaaaagaagatttgaagataaaaaaaattgtaggtctcggttaccatgat |
22458223 |
T |
|
| Q |
308 |
ttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaag |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22458222 |
ctgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatactgattcggcaatggatggctgaag |
22458123 |
T |
|
| Q |
408 |
gattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattag |
507 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458122 |
gatttgtgaaagatgatatggtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattag |
22458023 |
T |
|
| Q |
508 |
tattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgag |
607 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458022 |
tattgatggaagagcaaaaagttgttgtgttcatgatctggtgcatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgag |
22457923 |
T |
|
| Q |
608 |
gatgaccaatcatctttaagtgggatggttcgacgcctatcaatagcaatcagatctgataatttcatggaaaatattgaaaactcacaggttc |
701 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
22457922 |
gatgaccaatcatctttaagtgggatggttcgacgcctatcaatagcaatcagatttgacaatttgatggaaaatattgaaaactcacaggttc |
22457829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 602; E-Value: 0
Query Start/End: Original strand, 8 - 701
Target Start/End: Complemental strand, 22481502 - 22480810
Alignment:
| Q |
8 |
aatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttg |
107 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481502 |
aatcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttg |
22481403 |
T |
|
| Q |
108 |
tccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttattcttgcaaaga |
207 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
22481402 |
tccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttat-cttgcaaaga |
22481304 |
T |
|
| Q |
208 |
tagaaatacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgat |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
22481303 |
tagaaatacatcagaatggtataagtttagtgaaaatctaaatatagagttaaaagaagatttgaagataaaaaaaattgtaggtctcggttaccatgat |
22481204 |
T |
|
| Q |
308 |
ttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaag |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22481203 |
ctgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatactgattcggcaatggatggctgaag |
22481104 |
T |
|
| Q |
408 |
gattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattag |
507 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481103 |
gatttgtgaaagatgatatggtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattag |
22481004 |
T |
|
| Q |
508 |
tattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgag |
607 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481003 |
tattgatggaagagcaaaaagttgttgtgttcatgatctggtgcatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgag |
22480904 |
T |
|
| Q |
608 |
gatgaccaatcatctttaagtgggatggttcgacgcctatcaatagcaatcagatctgataatttcatggaaaatattgaaaactcacaggttc |
701 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
22480903 |
gatgaccaatcatctttaagtgggatggttcgacgcctatcaatagcaatcagatttgacaatttgatggaaaatattgaaaactcacaggttc |
22480810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 8 - 655
Target Start/End: Complemental strand, 22358034 - 22357388
Alignment:
| Q |
8 |
aatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||| ||||||| |||||||| |||||||| |
|
|
| T |
22358034 |
aatcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattccatgacttaaatggacgttg |
22357935 |
T |
|
| Q |
108 |
tccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttattcttgcaaaga |
207 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||||||| ||||||||||||||||| || |||||| |
|
|
| T |
22357934 |
tccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtatttta-gctcccaaaga |
22357836 |
T |
|
| Q |
208 |
tagaaatacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgat |
307 |
Q |
| |
|
|| || | || |||||||||||||||||||||| | ||||| ||||||| | ||| ||| | || || |||| | ||||||||||| |
|
|
| T |
22357835 |
taaaattccaatggaatggtataagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaaattttaggatttagttaccatgat |
22357736 |
T |
|
| Q |
308 |
ttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaag |
407 |
Q |
| |
|
||| ||||| | |||||||||||||| ||||||||||||||||||||||||| | || ||||| | |||| | ||||| ||| |||||||| ||||||| |
|
|
| T |
22357735 |
ttgccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaagacattgactcgacaatggattgctgaag |
22357636 |
T |
|
| Q |
408 |
gattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattag |
507 |
Q |
| |
|
| || |||||| | || | | || ||| ||||||| |||||||| |||||||||| ||| || || |||| ||||||||||||||| |||||| || |
|
|
| T |
22357635 |
ggtttgtgaaacaatatggggaaagaacgatggaagaggttgcagaaggatatttaaaagagttaatacatagaagtttggtgcaagtagattcaatcag |
22357536 |
T |
|
| Q |
508 |
tattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgag |
607 |
Q |
| |
|
|||||||||||||| |||| ||||| |||||||||||||||| |||| | |||||||||||||| | | | ||||| |||||| ||||||||| ||| |
|
|
| T |
22357535 |
tattgatggaagagtaaaacgttgtcgtgttcatgatctagtgcatgaaatgatccttgaaaaacataagcatttaagcttttgcgagaatattactgag |
22357436 |
T |
|
| Q |
608 |
gatgaccaatcatctttaagtgggatggttcgacgcctatcaatagca |
655 |
Q |
| |
|
| | |||| ||||||| ||| ||| |||||||||||||||||||| |
|
|
| T |
22357435 |
ggcaaacaattgtctttaactggaatgattcgacgcctatcaatagca |
22357388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 9 - 701
Target Start/End: Complemental strand, 22436665 - 22435971
Alignment:
| Q |
9 |
atcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgt |
108 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||| |||||||| ||||||| || ||||||||||||||| ||||||| |||| | ||| ||||| |
|
|
| T |
22436665 |
atcttcttttgttgaagtacatgaacttcaaggtttaactgaagaaaaatctttagaattgttcaataagaaggcattccataacttgagtggatgttgt |
22436566 |
T |
|
| Q |
109 |
ccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttattcttgcaaagat |
208 |
Q |
| |
|
||| |||||||||||||||||||||| ||||||||| |||||||||| ||||| || |||||||||||| ||| ||||||| |||||| ||||||||||| |
|
|
| T |
22436565 |
ccacaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattacctctagcaattgtagtcactggtggtcttttat-cttgcaaagat |
22436467 |
T |
|
| Q |
209 |
agaaatacatcagaatggtataagtttagtgaaattctaaatataga---gttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatg |
305 |
Q |
| |
|
|||||| | | |||||||| ||||||||||||| | ||||| ||| || ||| ||| ||| | || || |||| | ||||||||| |
|
|
| T |
22436466 |
agaaatcctactgaatggtacaagtttagtgaaaatataaatgcagatcagtcaaatgaatattccataataagaaaaattctaggatttagttaccatg |
22436367 |
T |
|
| Q |
306 |
atttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctga |
405 |
Q |
| |
|
||||| ||||| | |||||||| ||||| ||||||||||||||||||||||||| | |||||||| | |||| | ||||| ||| |||||||| ||||| |
|
|
| T |
22436366 |
atttgccttactacctcaagtcgtgtttcttgtattttggattatatcctgaagactatatagttcgttcaaaaacattgactcgccaatggattgctga |
22436267 |
T |
|
| Q |
406 |
aggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaatt |
505 |
Q |
| |
|
||| ||||||||||| || || | || |||||||||||| ||||| | |||||||||| ||| ||| ||| |||| |||||||||| ||||||||||| |
|
|
| T |
22436266 |
agggttcgtgaaagaagagaggggaaggacattggaagatattgcaaaaggatatttaatagagttggtcaatagaagtttggtgcatgtagtttcaata |
22436167 |
T |
|
| Q |
506 |
agtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcg |
605 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||||||| |||| |||||| |||||||||| |||| ||| || |||||||||||||||||||||| | |
|
|
| T |
22436166 |
agtattgatggaagagtaaaaagttgtcgtgttcatgatttagtgcatgcaatgatccttgagaaatatgaggatttaagtttttgcaagaatattactg |
22436067 |
T |
|
| Q |
606 |
aggatgaccaatcatctttaagtgggatggttcgacgcctatcaatagcaatcagatctgataatttcatggaaaatattgaaaactcacaggttc |
701 |
Q |
| |
|
|||| | |||| ||||||| | | || ||||||||||||||| |||| ||| ||| ||||| | |||||| |||||||| |||||| |||| |
|
|
| T |
22436066 |
aggacaatcaattttctttaactagagtgactcgacgcctatcaatggcaaccagttcttataatctaatggaaggtattgaaagctcacatgttc |
22435971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 31 - 655
Target Start/End: Complemental strand, 22442754 - 22442128
Alignment:
| Q |
31 |
gaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatat |
130 |
Q |
| |
|
||||| ||||||||| ||| ||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
22442754 |
gaactaaaaggtttgactgtagaacaatctttggagttgttcaataagaaggcatttcatgacttaaacggacgttgtccaaaaaatcttattggtatat |
22442655 |
T |
|
| Q |
131 |
cttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttattcttgcaaagatagaaatacatcagaatggtata |
230 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| || |||||||||||||||| ||||||||| |
|
|
| T |
22442654 |
cttccaaaattgttgaaaaatgcaatggattaccactagcaattgtagtcattggtggtatttta-gctcccaaagatagaaatacaattgaatggtatg |
22442556 |
T |
|
| Q |
231 |
agtttagtgaaattctaaatatag---agttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatttgtcttacaatctcaagtc |
327 |
Q |
| |
|
|||||| ||||| | ||||| || |||| || ||| ||| | | || |||| ||| |||||||||||||| ||| ||| |||||||| |
|
|
| T |
22442555 |
agtttaatgaaaatataaatgcagatcagtttaaggaatattccatagtaagaaaaattttaggactcagttaccatgatttgccttgcaacctcaagtc |
22442456 |
T |
|
| Q |
328 |
atgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgatagc |
427 |
Q |
| |
|
|||||| |||||||||||||||||||| |||| | | || | | |||| | ||||| ||| |||||||| |||||||| || |||||||| || | |
|
|
| T |
22442455 |
atgtttcttgtattttggattatatcccgaagactatgaagcttgttcaaagacattgactcgtcaatggatagctgaagggtttgtgaaagaatatggg |
22442356 |
T |
|
| Q |
428 |
gtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaa |
527 |
Q |
| |
|
| || ||||||||| | |||||||| |||||||||| || || ||| ||||| ||||||||||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
22442355 |
gaaaggacattggaaaaggttgcagaaggatatttaaaagtgttaatctgtagaagtttggtgcaagtagtttcaaccagtattgatggaagagtaaaaa |
22442256 |
T |
|
| Q |
528 |
gttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaatcatctttaag |
627 |
Q |
| |
|
|||| |||||||||||||||| |||| | |||||||||||||| | | | ||||| |||||| ||||||||| |||| | |||| ||||||| |
|
|
| T |
22442255 |
gttgccgtgttcatgatctagtgcatgaaatgatccttgaaaaacataagcatttaagcttttgcgagaatattactgagggaaaacaattgtctttaac |
22442156 |
T |
|
| Q |
628 |
tgggatggttcgacgcctatcaatagca |
655 |
Q |
| |
|
||| ||| |||||||||||||||||||| |
|
|
| T |
22442155 |
tggaatgattcgacgcctatcaatagca |
22442128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 8 - 701
Target Start/End: Complemental strand, 22367959 - 22367264
Alignment:
| Q |
8 |
aatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttg |
107 |
Q |
| |
|
|||||||||||||||||||| || |||| ||||||| ||||||| ||||||| || ||||||||||||||| | ||||| ||||| | |||| ||| |
|
|
| T |
22367959 |
aatcttcttttgttgaagtgcataaacttgaaggtttaagtgaagaaaaatctttagaattgttcaataagaaggcgttccatgacttgagcggatattg |
22367860 |
T |
|
| Q |
108 |
tccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttattcttgcaaaga |
207 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
22367859 |
tccagaaaatcttattgatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtatttta-gcttgcaaaga |
22367761 |
T |
|
| Q |
208 |
tagaaatacatcagaatggtataagtttagtgaaattctaaatatag---agttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccat |
304 |
Q |
| |
|
||| ||| || ||||||| |||||||||||||| | ||||| || ||| ||| ||| ||| | ||| || |||| || |||||||| |
|
|
| T |
22367760 |
taggaatccaattgaatggtctaagtttagtgaaaatataaatgcagatcagtcaaaggaatattccatgataaaaaaaattctaggacttagttaccat |
22367661 |
T |
|
| Q |
305 |
gatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctg |
404 |
Q |
| |
|
|||||| ||| ||| |||||||||||||| ||||| ||||||||||||||||||| | | |||| | |||||||||||| ||| |||||||| |||| |
|
|
| T |
22367660 |
gatttgccttgcaacctcaagtcatgtttcttgtactttggattatatcctgaagactcaaatgttcgttcaaatatattgactcgtcaatggattgctg |
22367561 |
T |
|
| Q |
405 |
aaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaat |
504 |
Q |
| |
|
|||| || |||||||| || || | || ||||||||||| |||||||| ||| |||||| ||| |||||| ||||| ||||||||| ||||| | || |
|
|
| T |
22367560 |
aagggtttgtgaaagaagaaaggggaatgacattggaagaggttgcagaaggacatttaatagagttgatccgtagaagtttggtgcgagtagatgggat |
22367461 |
T |
|
| Q |
505 |
tagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagc |
604 |
Q |
| |
|
| |||||||||||||| | | ||||| |||||||||||||||| |||||| |||||||| | ||| ||| || ||||| |||||||||| ||||| | |
|
|
| T |
22367460 |
cactattgatggaagagtagacagttgccgtgttcatgatctagtgcatgcaatgatccttaataaacatgaggatttaagcttttgcaagagtattacc |
22367361 |
T |
|
| Q |
605 |
gaggatgaccaatcatctttaagtgggatggttcgacgcctatcaatagcaatcagatctgataatttcatggaaaatattgaaaactcacaggttc |
701 |
Q |
| |
|
||||| |||| ||| || ||| ||| |||||||||||||||||||| || ||||||||| | |||||| |||||||| |||||| |||| |
|
|
| T |
22367360 |
gaggacagacaattgccttcaactggaatgattcgacgcctatcaatagcatcaagttctgataatctaatggaaggtattgaaagctcacatgttc |
22367264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 13 - 701
Target Start/End: Complemental strand, 22467978 - 22467291
Alignment:
| Q |
13 |
tcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgtccag |
112 |
Q |
| |
|
||||||| | ||||| |||| ||| || |||| |||||||||| || ||||| ||||| || |||||| | ||||| ||||| ||||| |||||||| |
|
|
| T |
22467978 |
tcttttggtaaagtgcatgagctggaacgtttatctgaagaacagtccttggaattgtttaaaaagaaggcgttccatgacttggacggagtttgtccag |
22467879 |
T |
|
| Q |
113 |
aaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttattcttgcaaagatagaa |
212 |
Q |
| |
|
|||||||| |||| |||||||| |||||||||||||| ||||| ||||| || ||||||||||| ||| |||| |||||||| || ||||| |||||| |
|
|
| T |
22467878 |
aaaatctttttgacatatcttccaaaattgttgaaaactgcaaaggattacctctagcaattgttgtcaccggtgatattttat-ctcgcaaaaatagaa |
22467780 |
T |
|
| Q |
213 |
atacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatttgtc |
312 |
Q |
| |
|
|| || ||||||| ||| |||||||||| | ||||| |||||||| | | | ||| | || || |||| | |||||||| |||| | |
|
|
| T |
22467779 |
atccaattgaatggtctaaatttagtgaaaatataaatgtagagttagagggatattccacaataagaaaaattttaggatttagttaccataatttacc |
22467680 |
T |
|
| Q |
313 |
ttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattc |
412 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||||||| | |||||||| | |||| | |||| ||| |||||||| |||||||| || |
|
|
| T |
22467679 |
ttacaacctcaagtcatgtttcttgtattttggattatatcctgaagactatatagttcattcaaagacgttgactcgccaatggattgctgaagggttt |
22467580 |
T |
|
| Q |
413 |
gtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattg |
512 |
Q |
| |
|
||||| || || || | | ||||||||||| ||||| || |||||||||| ||| |||||| |||| |||||||||||||||||||||| ||||||| |
|
|
| T |
22467579 |
gtgaaggaagacagggggaggacattggaagaggttgctgaaggatatttaatagagttgatccatagaagtttggtgcaagtagtttcaataagtattg |
22467480 |
T |
|
| Q |
513 |
atggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatga |
612 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||| |||||| |||||||||| |||| ||| || |||||||||||||||||||||| ||||| | |
|
|
| T |
22467479 |
atggaagagtaaaaagttgtcgtgttcatgatctagtgcatgcaatgatccttgataaatatgaggatttaagtttttgcaagaatattactgaggacaa |
22467380 |
T |
|
| Q |
613 |
ccaatcatctttaagtgggatggttcgacgcctatcaatagcaatcagatctgataatttcatggaaaatattgaaaactcacaggttc |
701 |
Q |
| |
|
|||| ||||||| ||| ||| |||||||||||||||||| || | ||||||||||| ||| || ||||||||||||||| |||| |
|
|
| T |
22467379 |
acaattgtctttaactggaatgattcgacgcctatcaatagaaactacctctgataatttaatgaaagttattgaaaactcacatgttc |
22467291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 47 - 701
Target Start/End: Complemental strand, 22630434 - 22629786
Alignment:
| Q |
47 |
ctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttga |
146 |
Q |
| |
|
|||||||||| |||||||| ||||| || ||||| | ||||| ||||| | ||| |||||||||||||||| |||| |||||||| ||||||||||| |
|
|
| T |
22630434 |
ctgaagaacagtctttggaattgtttaaaaagaaagcgttccatgacttggatggattttgtccagaaaatctttttgacatatcttccaaaattgttga |
22630335 |
T |
|
| Q |
147 |
aaaatgcaatggattgccactagcaattgtactcattggtggtattttattcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattct |
246 |
Q |
| |
|
||||||||| ||||| || |||||||||||| ||| |||| |||||||| || |||||| ||||||| || ||||||| |||||||||||||| | | |
|
|
| T |
22630334 |
aaaatgcaaaggattacctctagcaattgtagtcaccggtgatattttat-ctcgcaaagttagaaatccaattgaatggtctaagtttagtgaaaatat |
22630236 |
T |
|
| Q |
247 |
aaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttgga |
346 |
Q |
| |
|
|||| |||||||| | ||| ||| | || | |||| | ||||||||||||| ||||||| |||||||||||||| |||||||||||| |
|
|
| T |
22630235 |
aaatgtagagttagaggaatattccacaataagaaaaaatttaggatttagttaccatgatttaccttacaacctcaagtcatgtttcttgtattttgga |
22630136 |
T |
|
| Q |
347 |
ttatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatg |
446 |
Q |
| |
|
|| |||||||||| | |||||||| | |||| | |||| ||| |||||||| |||||||| || |||||||| | | | || |||||||||||| | |
|
|
| T |
22630135 |
ttctatcctgaagactatatagttcgttcaaaggtgttgactcgccaatggatcgctgaagggtttgtgaaagaagtcaagggaagaacattggaagagg |
22630036 |
T |
|
| Q |
447 |
ttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatct |
546 |
Q |
| |
|
||| ||| |||||||||| ||| ||| || ||||| ||||||||||||||||||||| ||||| ||||||||| |||||||||| |||| |||||||| |
|
|
| T |
22630035 |
ttggagaaggatatttaatagagttggtccgtagaagtttggtgcaagtagtttcaacaagtat--atggaagagtaaaaagttgtcgtgtacatgatct |
22629938 |
T |
|
| Q |
547 |
agtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaatcatctttaagtgggatggttcgacgccta |
646 |
Q |
| |
|
||| |||||| |||||||||| |||| ||| || |||||||||||||||||||||| ||||| | |||| ||||||| ||| ||| || |||||||| |
|
|
| T |
22629937 |
agtgcatgcaatgatccttgagaaatatgaggatttaagtttttgcaagaatattattgaggacaagcaattgtctttaactggaatgatttgacgccta |
22629838 |
T |
|
| Q |
647 |
tcaatagcaatcagatctgataatttcatggaaaatattgaaaactcacaggttc |
701 |
Q |
| |
|
|||||||||| | |||||||||| ||| ||| ||||||||||||||| |||| |
|
|
| T |
22629837 |
tcaatagcaacta---ctgataatttaatgaaaagtattgaaaactcacatgttc |
22629786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 116 - 601
Target Start/End: Complemental strand, 22635430 - 22634946
Alignment:
| Q |
116 |
atcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttattcttgcaaagatagaaata |
215 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||||||||| ||||| || |||||||||||| ||||||||| |||| ||| || ||| ||||||||| |
|
|
| T |
22635430 |
atcttattgatatatcttccaaaattgtcgaaaaatgcaaaggattacctctagcaattgtagtcattggtgatattctat-ctcgcacggatagaaatt |
22635332 |
T |
|
| Q |
216 |
catcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatttgtctta |
315 |
Q |
| |
|
|| |||||||| ||||||||||||| | ||||| ||||||| | ||| ||| | ||| || |||| || |||||||||||||| | | |
|
|
| T |
22635331 |
caatagaatggtcgaagtttagtgaaaatataaatgcagagttagaggaatattccatgataagaaaaattttaggacttagttaccatgatttgccatg |
22635232 |
T |
|
| Q |
316 |
caatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtg |
415 |
Q |
| |
|
| | |||||||||||||| ||||||||||||||||||||||||| | |||||||| | |||| | ||||| ||| |||||||| |||||||| |||||| |
|
|
| T |
22635231 |
ctacctcaagtcatgtttcttgtattttggattatatcctgaagactatatagttcgttcaaaaacattgactcgccaatggattgctgaagggttcgtg |
22635132 |
T |
|
| Q |
416 |
aaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatg |
515 |
Q |
| |
|
||||| || || | || ||||| ||||| |||||||| ||||||||| ||| |||||| |||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
22635131 |
aaagaagacaggggaaggacatttgaagaggttgcagaaggatatttagtagagttgatccatagaagtttggtgcaagtagtttcaactagtattgatg |
22635032 |
T |
|
| Q |
516 |
gaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatatt |
601 |
Q |
| |
|
|||||| ||||||||| | |||||||||||||| |||| | |||||||||| |||| | | || ||||||||||||||||||||| |
|
|
| T |
22635031 |
gaagagtaaaaagttgccgcgttcatgatctagtgcatgaaatgatccttgacaaatttaaggatttaagtttttgcaagaatatt |
22634946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 47 - 701
Target Start/End: Complemental strand, 22353806 - 22353155
Alignment:
| Q |
47 |
ctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttga |
146 |
Q |
| |
|
||||| ||||||||||||| ||||| || |||||| | |||| ||||| ||||| ||||||| |||||||| || |||||||||| ||||| |||| |
|
|
| T |
22353806 |
ctgaaaaacaatctttggatttgtttaaaaagaaggcgttccgtgacttggacggattttgtccaaaaaatcttttttatatatcttccgaaattattga |
22353707 |
T |
|
| Q |
147 |
aaaatgcaatggattgccactagcaattgtactcattggtggtattttattcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattct |
246 |
Q |
| |
|
||||||||| ||||| || || ||||||||| |||| ||| |||||||| || |||||||||||||| || ||||||| |||||||||||||| | | |
|
|
| T |
22353706 |
aaaatgcaaaggattacctctcgcaattgtagtcataggtaatattttat-ctcgcaaagatagaaatccaattgaatggtctaagtttagtgaaaatat |
22353608 |
T |
|
| Q |
247 |
aaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatttgtctt-acaatctcaagtcatgtttgttgtattttgg |
345 |
Q |
| |
|
|||| ||||||| | ||| ||| | || || |||| | |||||||||||||| ||| || | |||||||||||||| ||||||||||| |
|
|
| T |
22353607 |
aaatgcagagttagaggaatattccataataagaaaaattttaggatttagttaccatgatttgcctttactacctcaagtcatgtttcttgtattttgg |
22353508 |
T |
|
| Q |
346 |
attatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagat |
445 |
Q |
| |
|
|||||||| |||| | |||| | || ||| ||||| ||| |||||||| ||||| || || |||||||| | | | || ||| ||||||| |
|
|
| T |
22353507 |
attatatctcgaagactacgaagtttattcagatacattgactcgtcaatggattgctgaggggtttgtgaaagaatacgggggaaggacaatggaagag |
22353408 |
T |
|
| Q |
446 |
gttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatc |
545 |
Q |
| |
|
|||||||| |||||||||| ||| || ||| |||| ||||||||||||||| |||| | |||||||||||||||| |||||||||| ||||||| |||| |
|
|
| T |
22353407 |
gttgcagaaggatatttaaaagagttaatccatagaagtttggtgcaagtagattcagtcagtattgatggaagagtaaaaagttgtcgtgttcacgatc |
22353308 |
T |
|
| Q |
546 |
tagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaatcatctttaagtgggatggttcgacgcct |
645 |
Q |
| |
|
|||| |||| | |||||||| ||||| ||| || |||||||||||||||||||||| |||| | | ||| || |||| ||| ||| || ||||||| |
|
|
| T |
22353307 |
tagtgcatgaaatgatccttagaaaatatgaggatttaagtttttgcaagaatatta-cgagca--aacaactgtcattaactggaatgatttgacgcct |
22353211 |
T |
|
| Q |
646 |
atcaatagcaatcagatctgataatttcatggaaaatattgaaaactcacaggttc |
701 |
Q |
| |
|
||||||||||| || |||||||| || ||| ||| ||||||||||||||| |||| |
|
|
| T |
22353210 |
atcaatagcaactagttctgataagttaatgaaaagtattgaaaactcacatgttc |
22353155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 8 - 242
Target Start/End: Complemental strand, 22431205 - 22430972
Alignment:
| Q |
8 |
aatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttg |
107 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||||| | |||||| ||||||| || |||||||||||||| ||||| ||||| | |||| ||| |
|
|
| T |
22431205 |
aatcttcttttgttgaagtgcatgaacttaaaggtttaaccgaagaaaaatctttagaattgttcaataagaaagtgttccatgacttgagcggatattg |
22431106 |
T |
|
| Q |
108 |
tccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttattcttgcaaaga |
207 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
22431105 |
tccagaaaatcttatagatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtatttta-gcttgcaaaga |
22431007 |
T |
|
| Q |
208 |
tagaaatacatcagaatggtataagtttagtgaaa |
242 |
Q |
| |
|
||| ||| || ||||||| |||||||||||||| |
|
|
| T |
22431006 |
taggaatccaattgaatggtctaagtttagtgaaa |
22430972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 297 - 655
Target Start/End: Complemental strand, 22430914 - 22430556
Alignment:
| Q |
297 |
gttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatg |
396 |
Q |
| |
|
|||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||| ||| | ||||||| | |||| | ||| | | | ||||| |
|
|
| T |
22430914 |
gttaccatgatttgccttgcaacctcaagtcatgtttcttgtattttggattatatcctaaagactatatagtttattcaaagacattaacttgtcaatg |
22430815 |
T |
|
| Q |
397 |
gatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagta |
496 |
Q |
| |
|
||| |||||||| || |||||||| | | | || |||||| |||| |||||||| |||||||||| ||| |||||| |||| |||||||||||||| |
|
|
| T |
22430814 |
gattgctgaagggtttgtgaaagaaaaaacgggaaggacattgaaagaggttgcagaaggatatttaatagagttgatccatagaagtttggtgcaagta |
22430715 |
T |
|
| Q |
497 |
gtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaaga |
596 |
Q |
| |
|
| |||||| |||||||||||||||| || ||||||| |||||||||||||||| |||| | |||||||| |||||| ||| || ||||| ||||| ||| |
|
|
| T |
22430714 |
gattcaataagtattgatggaagagtaagaagttgtcgtgttcatgatctagtgcatgaaatgatccttaaaaaatatgaggatttaagcttttgtaagt |
22430615 |
T |
|
| Q |
597 |
atattagcgaggatgaccaatcatctttaagtgggatggttcgacgcctatcaatagca |
655 |
Q |
| |
|
|||| | |||| | | |||| | ||||| ||| ||| ||| |||||||||||||||| |
|
|
| T |
22430614 |
atatcaccgagaacaatcaattgtatttaactggaatgattcaacgcctatcaatagca |
22430556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 326 - 656
Target Start/End: Complemental strand, 22620599 - 22620269
Alignment:
| Q |
326 |
tcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgata |
425 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||| || || |||| | |||| | |||||||||||||||||| |||||||| || || ||||| || | |
|
|
| T |
22620599 |
tcatgtttattgtattttggattatatccagaagattataaagttgattcaaagagattgattcggcaatggatagctgaagggtttgtaaaagaagaaa |
22620500 |
T |
|
| Q |
426 |
gcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaa |
525 |
Q |
| |
|
| | || || |||||||| |||||||| ||||| |||||||| |||||| |||| |||||||||||||| |||| | || || ||||||| | |||| |
|
|
| T |
22620499 |
gggggaatactttggaagaagttgcagaaggatacttaacagagttgatccatagaagtttggtgcaagtatcttcactaagaatcgatggaaaaacaaa |
22620400 |
T |
|
| Q |
526 |
aagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaatcatcttta |
625 |
Q |
| |
|
||||||||| |||||||||||| | | | |||| |||||||| ||||| || |||||||||||||| ||||||| || ||| || ||||||||| |
|
|
| T |
22620399 |
aagttgttgcgttcatgatctaatacgtatgatgatacttgaaaagtgtgaggatctaagtttttgcaagtatattagtgaagattgtcattcatcttta |
22620300 |
T |
|
| Q |
626 |
agtgggatggttcgacgcctatcaatagcaa |
656 |
Q |
| |
|
|||| | |||||||||||||||||||| |
|
|
| T |
22620299 |
agtgaagttactcgacgcctatcaatagcaa |
22620269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 318 - 652
Target Start/End: Complemental strand, 22656777 - 22656443
Alignment:
| Q |
318 |
atctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaa |
417 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||| |||| || | |||| |||| | | |||| ||||||||||| |||||||| || ||||| |
|
|
| T |
22656777 |
atcttaagtcatgtttgttgtattttggaatatatccagaagattatgaagttgaatcaaagagagtgatacggcaatggatagctgaaggttttgtgaa |
22656678 |
T |
|
| Q |
418 |
agatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatgga |
517 |
Q |
| |
|
||| || || | ||||| |||||||| |||||||| |||||||||||||| ||||| | || ||||||| |||||| ||| |||| ||||| ||| |
|
|
| T |
22656677 |
agaagaaagggggaaaactttggaagaagttgcagaaggatatttaacagagttgattcgccgatgtttggtacaagtatcctcagttagaattgacgga |
22656578 |
T |
|
| Q |
518 |
agagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaat |
617 |
Q |
| |
|
| | | |||||||||||||| |||||| || | ||| ||||||||||||| ||||| || |||||||| |||||| ||||||| | |||| ||| | |
|
|
| T |
22656577 |
aaaactaaaagttgttgtgtccatgatttaatacatatgatgatccttgaaaagtgtgaggatttaagtttctgcaagcatattagtgcagatggccatt |
22656478 |
T |
|
| Q |
618 |
catctttaagtgggatggttcgacgcctatcaata |
652 |
Q |
| |
|
||||| ||||||| || ||||||||||||||||| |
|
|
| T |
22656477 |
catctataagtggaattattcgacgcctatcaata |
22656443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 297 - 595
Target Start/End: Complemental strand, 30989037 - 30988739
Alignment:
| Q |
297 |
gttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatg |
396 |
Q |
| |
|
||||| |||||||| ||||| |||||||||||| ||||||||||||||| ||||||| |||| || | |||| |||| | ||||||||| ||||| |
|
|
| T |
30989037 |
gttacgatgatttgccttactctctcaagtcatgcttgttgtattttggaatatatccagaagattatgaagttaaatcaaagagattgattcgacaatg |
30988938 |
T |
|
| Q |
397 |
gatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagta |
496 |
Q |
| |
|
| | |||||||| |||||||| || || || | || || |||||||| |||||||| |||||||||||||| |||||| |||| | |||||||||||| |
|
|
| T |
30988937 |
ggtagctgaagggttcgtgaaggaggaaagagggaagactttggaagacgttgcagaaggatatttaacagagttgatccatagaagcttggtgcaagta |
30988838 |
T |
|
| Q |
497 |
gtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaag |
595 |
Q |
| |
|
||| |||| ||||||| | ||| ||| ||||| |||||||||||||| | | | ||||||||||||||| ||| || |||| |||||||||| |
|
|
| T |
30988837 |
tcttcggttagagttgatggtaaagctaaaggttgtcgtgttcatgatctaatacgcgatatgatccttgaaaaatttgaggatttaaatttttgcaag |
30988739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 434 - 602
Target Start/End: Complemental strand, 37930467 - 37930298
Alignment:
| Q |
434 |
acattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgtt |
533 |
Q |
| |
|
||||||||| | ||||| || |||||||||| ||| || ||| ||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
37930467 |
acattggaaaaggttgcggaaggatatttaaaagagttaatctgtagaagtttggtgcaagtagtttcaaccggtattgatggaagagtaaaaagttgtc |
37930368 |
T |
|
| Q |
534 |
gtgttcatgatctagtccatgcattgatcctt-gaaaaatgtgaagaattaagtttttgcaagaatatta |
602 |
Q |
| |
|
|||||||||||||||| |||| | |||||||| || |||| | || |||||||||||| ||||||||| |
|
|
| T |
37930367 |
gtgttcatgatctagtgcatgaaatgatcctttgacaaatttatggatttaagtttttgcgagaatatta |
37930298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 303 - 547
Target Start/End: Original strand, 21946364 - 21946608
Alignment:
| Q |
303 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggc |
402 |
Q |
| |
|
|||||||| ||| | ||||||||||||| ||||| ||||||||| ||||||| |||| || | |||| | || | | ||||||| |||||||| || |
|
|
| T |
21946364 |
atgatttgccttgctatctcaagtcatgcttgttttattttggagtatatccagaagattatgaagttaaatcgaagagagtgattcgacaatggatagc |
21946463 |
T |
|
| Q |
403 |
tgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttca |
502 |
Q |
| |
|
|||||| || ||||| || || || | || || |||||||| || ||||| |||||||||||||| |||||| |||| | |||| |||||| |||| |
|
|
| T |
21946464 |
tgaagggtttgtgaaggaggaaagagggaagactttggaagaagtggcagaaggatatttaacagagttgatccatagaagcctggttcaagtatcttca |
21946563 |
T |
|
| Q |
503 |
attagtattgatggaagagcaaaaagttgttgtgttcatgatcta |
547 |
Q |
| |
|
|||| |||||||| | ||| ||| ||||| |||||||||||||| |
|
|
| T |
21946564 |
cttagaattgatggtaaagctaaaggttgtcgtgttcatgatcta |
21946608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 437 - 625
Target Start/End: Complemental strand, 22647776 - 22647588
Alignment:
| Q |
437 |
ttggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtg |
536 |
Q |
| |
|
|||||||| |||||||| |||||||||| || |||||| |||| ||||||| |||||| |||| |||| |||||||||| | | |||||||| |||| |
|
|
| T |
22647776 |
ttggaagaagttgcagaacgatatttaactgagttgatccatagaagtttggttcaagtatcttcagttagaattgatggaaaaactaaaagttgctgtg |
22647677 |
T |
|
| Q |
537 |
ttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaatcatcttta |
625 |
Q |
| |
|
|||||||||| | ||| ||||||||||||| |||| || ||||||| |||||| ||||||| || ||||| | ||||||||| |
|
|
| T |
22647676 |
ttcatgatctgatacatatgatgatccttgaaaagagtgaggatataagtttctgcaagcatattagtgaagatgatctttcatcttta |
22647588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 303 - 649
Target Start/End: Original strand, 21937893 - 21938239
Alignment:
| Q |
303 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggc |
402 |
Q |
| |
|
|||||||| ||||| ||||||||||||| ||||||||||||||| ||||||| |||| || | | || |||| | | | ||||| |||||||| || |
|
|
| T |
21937893 |
atgatttgccttactatctcaagtcatgcttgttgtattttggagtatatccagaagattttgaaattagaccaaagagagtcattcgacaatggatagc |
21937992 |
T |
|
| Q |
403 |
tgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttca |
502 |
Q |
| |
|
||||||||| ||||| || || | | ||| || ||||||| || ||||| |||||| ||||||| ||||| |||| | |||| |||||| ||| |
|
|
| T |
21937993 |
tgaaggatttgtgaaggaggaaaagggaaagactatggaagaagtggcagagggatatctaacagagttgatacatagaagcctggttcaagtatcctca |
21938092 |
T |
|
| Q |
503 |
attagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatatta |
602 |
Q |
| |
|
|||| |||||||| | ||| ||| ||||| |||||||||||||| | | || |||||||||||||| ||| || || | |||||||||| |||| | |
|
|
| T |
21938093 |
cttagaattgatggcaaagctaaaggttgtcgtgttcatgatctaatacgtgatatgatccttgaaaaagatgaggattttaatttttgcaagcatatca |
21938192 |
T |
|
| Q |
603 |
gcgaggatgaccaatcatctttaagtgggatggttcgacgcctatca |
649 |
Q |
| |
|
| || |||| ||| ||| |||||||| || ||||| ||||||||| |
|
|
| T |
21938193 |
gtgatgatggacaaagatccttaagtggaatagttcggcgcctatca |
21938239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 303 - 652
Target Start/End: Original strand, 22180157 - 22180506
Alignment:
| Q |
303 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggc |
402 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||||||| ||||||| || | || | |||| | || | | | | ||| ||||||| || |
|
|
| T |
22180157 |
atgatttgccttactatctcaagtcatgtttgttgtattttggagtatatccagaggattatgaagttaaatcgaagagagtaactcgaaaatggatagc |
22180256 |
T |
|
| Q |
403 |
tgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttca |
502 |
Q |
| |
|
|||||| || ||||| || || | | ||||||| ||||||| || ||||| |||||| ||||||| |||||| |||| | |||| |||||| ||| |
|
|
| T |
22180257 |
tgaagggtttgtgaaggaggaaaagggaaaaacaatggaagaagtggcagagggatatctaacagagttgatccatagaagcctggttcaagtatcttcg |
22180356 |
T |
|
| Q |
503 |
attagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatatta |
602 |
Q |
| |
|
|||| |||||||| | ||| ||| ||||| |||||||||||||| | | || |||||||| ||||| ||| || || | |||||||||| |||||| |
|
|
| T |
22180357 |
cttagaattgatggcaaagctaaaggttgtcgtgttcatgatctaatacgtgatatgatccttcaaaaaaatgaggattttaatttttgcaagcatatta |
22180456 |
T |
|
| Q |
603 |
gcgaggatgaccaatcatctttaagtgggatggttcgacgcctatcaata |
652 |
Q |
| |
|
| || |||| || ||| |||||||| || ||||| |||||||||||| |
|
|
| T |
22180457 |
gtgatgatggacagatatccttaagtggaatagttcggcgcctatcaata |
22180506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 545
Target Start/End: Original strand, 22115825 - 22116067
Alignment:
| Q |
303 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggc |
402 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||||||| |||| || |||| || | |||| |||| | | | | ||| |||||||| || |
|
|
| T |
22115825 |
atgatttgccttactatctcaagtcatgtttgttgtattttggagtatacccagaagattttgaagttaaatcaaagagaatcactcgacaatggatagc |
22115924 |
T |
|
| Q |
403 |
tgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttca |
502 |
Q |
| |
|
|||||| || ||||| || || || | ||| || |||| || || ||||| |||||| ||||||| |||||| |||| || |||| |||||| ||| |
|
|
| T |
22115925 |
tgaagggtttgtgaaggaggaaaggggaaagactatggatgaagtggcagagggatatataacagagttgatccatagaagtatggttcaagtatcttcg |
22116024 |
T |
|
| Q |
503 |
attagtattgatggaagagcaaaaagttgttgtgttcatgatc |
545 |
Q |
| |
|
|||| |||||||| | ||| ||| ||||| |||||||||||| |
|
|
| T |
22116025 |
cttagaattgatggcaaagctaaaggttgtcgtgttcatgatc |
22116067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 196
Target Start/End: Complemental strand, 22620946 - 22620755
Alignment:
| Q |
8 |
aatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccac---gacttaaacggacg |
104 |
Q |
| |
|
||||||||||| |||| ||| ||||||| || ||| |||| ||||||||||| |||||||||||||||||| ||| | ||||| | ||| | |
|
|
| T |
22620946 |
aatcttcttttattgaggtgcatgaactacaacctttaactgaggaacaatcttttgagttgttcaataagaaggtatttcgatttgactttgatggaag |
22620847 |
T |
|
| Q |
105 |
ttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttat |
196 |
Q |
| |
|
||||||| || |||| |||||||||||||| |||||| | ||||||||| || || ||||||||||||||| | |||||||| |||||| |
|
|
| T |
22620846 |
ttgtccaaaagatctaattgatatatcttccgaaattgctagaaaatgcaagggtttaccactagcaattgtagccgttggtggtcttttat |
22620755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 303 - 547
Target Start/End: Original strand, 22053446 - 22053690
Alignment:
| Q |
303 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggc |
402 |
Q |
| |
|
|||||||| ||||| ||||| ||||||| ||||||||||||||| ||||||| |||| || | |||| | |||| | ||||||| |||||||| || |
|
|
| T |
22053446 |
atgatttgccttactatctcgagtcatgcttgttgtattttggagtatatccagaagattatgaagttaattcaaagcgagtgattcgacaatggatagc |
22053545 |
T |
|
| Q |
403 |
tgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttca |
502 |
Q |
| |
|
||||| || ||||| || || | | || || |||||||| || ||||| ||||||||| |||| |||||| |||| | |||| |||||| |||| |
|
|
| T |
22053546 |
agaagggtttgtgaaggaggaaaaggggaagactttggaagaagtggcagaaggatatttatcagagttgatccatagaagcctggttcaagtatcttca |
22053645 |
T |
|
| Q |
503 |
attagtattgatggaagagcaaaaagttgttgtgttcatgatcta |
547 |
Q |
| |
|
|||| |||||||| | ||| ||| | ||| |||||||||||||| |
|
|
| T |
22053646 |
cttagaattgatggcaaagctaaaggatgtcgtgttcatgatcta |
22053690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 22187424 - 22187501
Alignment:
| Q |
10 |
tcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattc |
87 |
Q |
| |
|
||||||||| |||| ||| |||||||| || ||| || ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
22187424 |
tcttcttttattgaggtgcatgaactgcaacctttatctctagaacaatctttggagttgttcaataagaaggcattc |
22187501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 22028740 - 22028796
Alignment:
| Q |
303 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
359 |
Q |
| |
|
|||||||| ||||| |||||||| |||| ||||||||||||||| ||||||| |||| |
|
|
| T |
22028740 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaag |
22028796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 22035257 - 22035313
Alignment:
| Q |
303 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
359 |
Q |
| |
|
|||||||| ||||| |||||||| |||| ||||||||||||||| ||||||| |||| |
|
|
| T |
22035257 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaag |
22035313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 22105448 - 22105504
Alignment:
| Q |
303 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
359 |
Q |
| |
|
|||||||| ||||| ||||||||||||| |||||||| |||||| ||||||| |||| |
|
|
| T |
22105448 |
atgatttgccttactatctcaagtcatgcttgttgtactttggagtatatccagaag |
22105504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 22187728 - 22187784
Alignment:
| Q |
303 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
359 |
Q |
| |
|
|||||||| ||||| |||||||| |||| ||||||||||||||| ||||||| |||| |
|
|
| T |
22187728 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaag |
22187784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 21930899 - 21930934
Alignment:
| Q |
52 |
gaacaatctttggagttgttcaataagaagacattc |
87 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |
|
|
| T |
21930899 |
gaacaatctttggagttgttcaataagaaggcattc |
21930934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 21937631 - 21937666
Alignment:
| Q |
52 |
gaacaatctttggagttgttcaataagaagacattc |
87 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |
|
|
| T |
21937631 |
gaacaatctttggagttgttcaataagaaggcattc |
21937666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 30989297 - 30989258
Alignment:
| Q |
48 |
tgaagaacaatctttggagttgttcaataagaagacattc |
87 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
30989297 |
tgaacaacaatctttggagttgttcaataagaaggcattc |
30989258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 437 - 547
Target Start/End: Original strand, 21931295 - 21931405
Alignment:
| Q |
437 |
ttggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtg |
536 |
Q |
| |
|
|||||||| || ||||| |||||||||||||| |||||| |||| | | || |||||| |||| |||| |||||||| | ||| ||| ||||| ||| |
|
|
| T |
21931295 |
ttggaagaagtggcagaaggatatttaacagagttgatccatagaagcctcgttcaagtatcttcacttagaattgatggcaaagctaaaggttgtcgtg |
21931394 |
T |
|
| Q |
537 |
ttcatgatcta |
547 |
Q |
| |
|
||||||||||| |
|
|
| T |
21931395 |
ttcatgatcta |
21931405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 22028436 - 22028506
Alignment:
| Q |
10 |
tcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaa |
80 |
Q |
| |
|
||||||||| |||| ||| |||||||| || ||| || |||||||||||||||||||||||||||||| |
|
|
| T |
22028436 |
tcttcttttattgaggtgcatgaactgcaacctttatctctagaacaatctttggagttgttcaataagaa |
22028506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 458 - 592
Target Start/End: Complemental strand, 22614842 - 22614708
Alignment:
| Q |
458 |
tatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcat |
557 |
Q |
| |
|
|||||| |||| ||||| | |||| ||||||||||| | ||| |||| ||||||||||| || ||||||||| |||||||||||||| | | || |
|
|
| T |
22614842 |
tatttatcagagttgattaatagaagtttggtgcaaatctcttcgattaatattgatggaaaagttaaaagttgtcgtgttcatgatctattacgtgtga |
22614743 |
T |
|
| Q |
558 |
tgatccttgaaaaatgtgaagaattaagtttttgc |
592 |
Q |
| |
|
||||| ||||||||| | | || |||||||||||| |
|
|
| T |
22614742 |
tgatctttgaaaaatttaaggatttaagtttttgc |
22614708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 382 - 468
Target Start/End: Complemental strand, 22628182 - 22628096
Alignment:
| Q |
382 |
attgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacaga |
468 |
Q |
| |
|
||||||||| |||| ||| ||||||||||| |||||||| || || | |||||| || ||||| || |||| |||||||||||||| |
|
|
| T |
22628182 |
attgattcgacaattgatagctgaaggatttgtgaaagaagaaaggggaaaaactttcgaagaagtcacagaaggatatttaacaga |
22628096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 57; Significance: 2e-23; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 392 - 656
Target Start/End: Original strand, 34990046 - 34990310
Alignment:
| Q |
392 |
caatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgc |
491 |
Q |
| |
|
|||||||| |||||||| || |||||||| || || | || || |||||||| |||| ||| ||||||||||||| ||||| ||||| ||||||||| |
|
|
| T |
34990046 |
caatggatagctgaagggtttgtgaaagaggaaagtgggaagactttggaagaagttgaagaaagatatttaacagagttgattcgtagaagtttggtgc |
34990145 |
T |
|
| Q |
492 |
aagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttg |
591 |
Q |
| |
|
||||| ||| |||| |||||||||| | | | ||||||||||||||||||||| | ||| ||||||||||||| ||||| || ||||||||||| |
|
|
| T |
34990146 |
aagtatcctcagttagcattgatggaaaaactagaagttgttgtgttcatgatctgatacatatgatgatccttgaaaagtgtgaggatttaagtttttg |
34990245 |
T |
|
| Q |
592 |
caagaatattagcgaggatgaccaatcatctttaagtgggatggttcgacgcctatcaatagcaa |
656 |
Q |
| |
|
|||| || | | || || || || |||||||||||||| | | |||||||||||||||||| |
|
|
| T |
34990246 |
caagcatttcaatgatgacgatcattcatctttaagtggaactatcagacgcctatcaatagcaa |
34990310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 437 - 656
Target Start/End: Original strand, 34976245 - 34976464
Alignment:
| Q |
437 |
ttggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtg |
536 |
Q |
| |
|
|||||||| |||||| | |||||||||||||| ||||| || || |||||||||||||| ||| |||| |||||||||| | ||||||||||||| |
|
|
| T |
34976245 |
ttggaagaagttgcaaaaggatatttaacagagttgattcgtcgaagtttggtgcaagtatcctcagttagaattgatggaaagcctaaaagttgttgtg |
34976344 |
T |
|
| Q |
537 |
ttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaatcatctttaagtgggatggt |
636 |
Q |
| |
|
|||||||||| | | | ||||||||||||| ||||| || ||||||||||||||| || | | || |||| || |||||||||||||| | | |
|
|
| T |
34976345 |
ttcatgatctgatacgtatgatgatccttgaaaagtgtgaggatttaagtttttgcaagcatttcaatgaagatggtcattcatctttaagtggaactat |
34976444 |
T |
|
| Q |
637 |
tcgacgcctatcaatagcaa |
656 |
Q |
| |
|
| |||||||||||||||||| |
|
|
| T |
34976445 |
tagacgcctatcaatagcaa |
34976464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 437 - 656
Target Start/End: Original strand, 34983356 - 34983575
Alignment:
| Q |
437 |
ttggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtg |
536 |
Q |
| |
|
|||||||| |||||| | |||||||||||||| ||||| || || |||||||||||||| ||| |||| |||||||||| | ||||||||||||| |
|
|
| T |
34983356 |
ttggaagaagttgcaaaaggatatttaacagagttgattcgtcgaagtttggtgcaagtatcctcagttagaattgatggaaagcctaaaagttgttgtg |
34983455 |
T |
|
| Q |
537 |
ttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaatcatctttaagtgggatggt |
636 |
Q |
| |
|
|||||||||| | | | ||||||||||||| ||||| || ||||||||||||||| || | | || |||| || |||||||||||||| | | |
|
|
| T |
34983456 |
ttcatgatctgatacgtatgatgatccttgaaaagtgtgaggatttaagtttttgcaagcatttcaatgaagatggtcattcatctttaagtggaactat |
34983555 |
T |
|
| Q |
637 |
tcgacgcctatcaatagcaa |
656 |
Q |
| |
|
| |||||||||||||||||| |
|
|
| T |
34983556 |
tagacgcctatcaatagcaa |
34983575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 384 - 546
Target Start/End: Complemental strand, 2305131 - 2304969
Alignment:
| Q |
384 |
tgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagagg |
483 |
Q |
| |
|
||||||| || ||||| |||||||| || ||||| || || || | || || |||||||| |||||||| ||||||||| |||| ||||| || || | |
|
|
| T |
2305131 |
tgattcgacagtggatagctgaagggtttgtgaaggaggaaagtgggaagactttggaagaagttgcagaaggatatttatcagagttgattcgtcgaag |
2305032 |
T |
|
| Q |
484 |
tttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatct |
546 |
Q |
| |
|
||||||||||||| ||| |||| |||||||||| | | ||||||||||||||||||||||| |
|
|
| T |
2305031 |
tttggtgcaagtatcctcagttagcattgatggaaaatctaaaagttgttgtgttcatgatct |
2304969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 603
Target Start/End: Complemental strand, 872224 - 872150
Alignment:
| Q |
529 |
ttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattag |
603 |
Q |
| |
|
|||| |||||||||||||| | |||| |||||||||||||||| ||| || |||| |||||||||| ||||||| |
|
|
| T |
872224 |
ttgtcgtgttcatgatctactacatgatttgatccttgaaaaatttgaggatttaaatttttgcaagcatattag |
872150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 603
Target Start/End: Complemental strand, 1233501 - 1233427
Alignment:
| Q |
529 |
ttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattag |
603 |
Q |
| |
|
|||| |||||||||||||| | |||| |||||||||||||||| ||| || |||| |||||||||| ||||||| |
|
|
| T |
1233501 |
ttgtcgtgttcatgatctactacatgatttgatccttgaaaaatttgaggatttaaatttttgcaagcatattag |
1233427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 595
Target Start/End: Original strand, 40580766 - 40580966
Alignment:
| Q |
395 |
tggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaag |
494 |
Q |
| |
|
||||| |||||||| || ||||| || || || | ||| || |||||||| ||||| || | ||||||||| || ||||| || | |||||||||||| |
|
|
| T |
40580766 |
tggatagctgaagggtttgtgaaggaggaaagtggaaagactttggaagaagttgctgaagtatatttaactgagttgattcgtcgtagtttggtgcaag |
40580865 |
T |
|
| Q |
495 |
tagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaa |
594 |
Q |
| |
|
|| |||||||| |||||||||| | | |||||||||| |||||| ||| | | | | |||||| |||||| ||||| ||||||||||||||||| |
|
|
| T |
40580866 |
tatcctcaattagaattgatggaaaaactaaaagttgttttgttcacgatttgatacgtatgatgatccatgaaaagtgtgaggaattaagtttttgcaa |
40580965 |
T |
|
| Q |
595 |
g |
595 |
Q |
| |
|
| |
|
|
| T |
40580966 |
g |
40580966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University