View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21053_low_16 (Length: 251)
Name: NF21053_low_16
Description: NF21053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21053_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 5 - 241
Target Start/End: Complemental strand, 13503709 - 13503474
Alignment:
| Q |
5 |
cctctatcttctcctttgttgcctactacttgcattttcatgtgtaataactcacttgggtgtttgtgattggaaagagatgacgatgtaatctacattg |
104 |
Q |
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| T |
13503709 |
cctctatcttctcctttgttgcctactacttgcattttcatgtgtaataactcacttgggtgtttgtgattggaaagagatgacgatgtaatctacattg |
13503610 |
T |
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| Q |
105 |
ttcaaatctaattttaataataagacgaggttgtgtattttccgtcatgtgatgcatgtaaccattactttgtattactaagaaacaacaatttaaaatt |
204 |
Q |
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| T |
13503609 |
ttcaaatctacttttaataataagacgaggttgtgtattttccgtcatgtgatgcatgtaaccattac-ttgtattactaagaaacaacaatttaaaatt |
13503511 |
T |
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| Q |
205 |
ttagaaatattgatacctcctttctttataccctttg |
241 |
Q |
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|||||||||||||||||||||||||||||||| |||| |
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| T |
13503510 |
ttagaaatattgatacctcctttctttataccttttg |
13503474 |
T |
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