View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21054_high_4 (Length: 373)
Name: NF21054_high_4
Description: NF21054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21054_high_4 |
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Alignment Details
Target: chr6 (Bit Score: 166; Significance: 9e-89; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 184 - 357
Target Start/End: Complemental strand, 21872461 - 21872288
Alignment:
| Q |
184 |
tctgaaccaccttcctcttcttcttcatcctctcgaaccggaatgaaacttatcgttcctcttcaagccgtagttcaaggtcgcaacggttttctcctcg |
283 |
Q |
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| T |
21872461 |
tctgaaccaccttcctcttcttcttcatcctctcgaaccggaatgaaacttatcgttcctcttcaagccgtagttcaaggtcgcaacggttttctcctgg |
21872362 |
T |
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| Q |
284 |
gtagtttaatccctttatcactcttttactttcttcaactctaccttaaacgacgtcgttctgagaacaataac |
357 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21872361 |
gtagtttaatccctttgtcactcttttactttcttcaactctaccttaaacgacgtcgttctgagaacaataac |
21872288 |
T |
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