View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21055_high_7 (Length: 243)
Name: NF21055_high_7
Description: NF21055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21055_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 50423130 - 50422904
Alignment:
| Q |
1 |
cagtccaattagaaccgatgatatttacagataaattgactggttggattgtctacactatggaaataatagttttacagagtcgggtaaatcagttcaa |
100 |
Q |
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| T |
50423130 |
cagtccaattagaaccaatgatatttacagataaatcgactggttggattgtctacactatggaaataatagttttacagagtcgggtaaatcagttcaa |
50423031 |
T |
|
| Q |
101 |
tttgtttcagttatacagttcgactgatgaccaacgattaaaccaatgatttgatacacggatacccttattgaattaatcaattggtcggtttttatat |
200 |
Q |
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| T |
50423030 |
tttgtttcagttatacagttcgactgatgatcaacgattaaaccaatgatttgatacacggatacccttatagaattaatcaattggtcggtttttatat |
50422931 |
T |
|
| Q |
201 |
cacctctactattataggtatgttttc |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
50422930 |
cacctctactattataggtatgttttc |
50422904 |
T |
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