View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21056_high_11 (Length: 257)

Name: NF21056_high_11
Description: NF21056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21056_high_11
NF21056_high_11
[»] chr4 (53 HSPs)
chr4 (1-59)||(40675361-40675419)
chr4 (1-59)||(6244985-6245043)
chr4 (1-59)||(47633199-47633257)
chr4 (1-59)||(19801173-19801231)
chr4 (1-59)||(33984786-33984844)
chr4 (1-55)||(39839472-39839526)
chr4 (1-59)||(43375329-43375387)
chr4 (1-59)||(45559990-45560048)
chr4 (1-59)||(49334531-49334589)
chr4 (151-216)||(19801332-19801397)
chr4 (151-216)||(33984616-33984681)
chr4 (151-216)||(39839632-39839697)
chr4 (151-216)||(44448987-44449052)
chr4 (151-216)||(47633353-47633418)
chr4 (151-216)||(49334690-49334755)
chr4 (151-216)||(53284528-53284593)
chr4 (152-216)||(43375162-43375226)
chr4 (1-59)||(317931-317989)
chr4 (1-59)||(2942991-2943049)
chr4 (1-59)||(19802535-19802593)
chr4 (1-59)||(37113702-37113760)
chr4 (1-59)||(44449154-44449212)
chr4 (1-59)||(53284695-53284753)
chr4 (1-55)||(54999448-54999502)
chr4 (1-59)||(55900423-55900481)
chr4 (151-216)||(19802370-19802435)
chr4 (151-216)||(45560855-45560920)
chr4 (11-59)||(51942458-51942506)
chr4 (151-190)||(2943145-2943184)
chr4 (1-43)||(27536976-27537018)
chr4 (1-59)||(32013081-32013139)
chr4 (153-189)||(10658172-10658208)
chr4 (153-189)||(10872317-10872353)
chr4 (155-216)||(36180876-36180937)
chr4 (11-59)||(43939467-43939515)
chr4 (11-59)||(49647909-49647957)
chr4 (153-189)||(49648356-49648392)
chr4 (151-190)||(26189032-26189071)
chr4 (1-56)||(36180712-36180767)
chr4 (11-57)||(6288394-6288440)
chr4 (157-216)||(37113876-37113935)
chr4 (1-43)||(48058002-48058044)
chr4 (155-189)||(50791932-50791966)
chr4 (1-59)||(51941680-51941737)
chr4 (1-59)||(55345375-55345433)
chr4 (1-54)||(25421320-25421373)
chr4 (151-183)||(6244851-6244883)
chr4 (11-59)||(10656857-10656905)
chr4 (11-59)||(10658040-10658088)
chr4 (11-59)||(10871002-10871050)
chr4 (11-59)||(10872185-10872233)
chr4 (153-189)||(50791378-50791414)
chr4 (158-190)||(55345239-55345271)
[»] chr8 (50 HSPs)
chr8 (1-59)||(36859944-36860002)
chr8 (1-59)||(14912453-14912511)
chr8 (1-59)||(35397365-35397423)
chr8 (1-59)||(38745434-38745492)
chr8 (1-59)||(39734717-39734775)
chr8 (1-59)||(5575293-5575351)
chr8 (1-59)||(20696692-20696750)
chr8 (1-59)||(22215806-22215864)
chr8 (1-59)||(40530187-40530245)
chr8 (1-58)||(5838953-5839010)
chr8 (3-55)||(3153791-3153843)
chr8 (151-216)||(20696847-20696912)
chr8 (151-216)||(40530021-40530086)
chr8 (151-190)||(3153943-3153982)
chr8 (151-190)||(5838823-5838862)
chr8 (151-190)||(17123216-17123255)
chr8 (151-190)||(25100710-25100749)
chr8 (151-190)||(36859805-36859844)
chr8 (151-190)||(43800281-43800320)
chr8 (1-59)||(285151-285209)
chr8 (1-59)||(630668-630726)
chr8 (1-59)||(816480-816538)
chr8 (1-59)||(17123355-17123413)
chr8 (1-59)||(17155361-17155419)
chr8 (151-249)||(17155519-17155617)
chr8 (1-59)||(25099566-25099624)
chr8 (1-55)||(35159599-35159653)
chr8 (153-216)||(35159759-35159822)
chr8 (1-59)||(41669555-41669613)
chr8 (1-59)||(43800132-43800190)
chr8 (151-188)||(5575152-5575189)
chr8 (151-216)||(14912310-14912375)
chr8 (155-216)||(25099727-25099788)
chr8 (151-216)||(35397521-35397586)
chr8 (151-216)||(38746448-38746513)
chr8 (151-216)||(39734549-39734614)
chr8 (151-190)||(285011-285050)
chr8 (151-190)||(630827-630866)
chr8 (151-190)||(816639-816678)
chr8 (1-55)||(25100848-25100902)
chr8 (156-190)||(34615439-34615473)
chr8 (153-189)||(35020009-35020045)
chr8 (11-59)||(35020979-35021027)
chr8 (151-190)||(22215675-22215714)
chr8 (12-59)||(41670280-41670327)
chr8 (151-189)||(40210359-40210397)
chr8 (1-59)||(40210452-40210510)
chr8 (11-59)||(5964715-5964763)
chr8 (11-59)||(19142250-19142298)
chr8 (11-59)||(35252531-35252579)
[»] chr2 (44 HSPs)
chr2 (1-59)||(42520492-42520550)
chr2 (1-59)||(36935402-36935460)
chr2 (1-59)||(36985978-36986036)
chr2 (1-59)||(38325020-38325078)
chr2 (151-216)||(1875484-1875549)
chr2 (151-216)||(18239863-18239928)
chr2 (1-59)||(1875325-1875383)
chr2 (1-59)||(5774784-5774842)
chr2 (1-59)||(7455222-7455280)
chr2 (1-59)||(18240046-18240104)
chr2 (151-216)||(7455053-7455118)
chr2 (151-216)||(36935557-36935622)
chr2 (151-216)||(38324848-38324913)
chr2 (151-216)||(39240079-39240144)
chr2 (151-190)||(36986138-36986177)
chr2 (1-55)||(8876371-8876425)
chr2 (1-59)||(10034331-10034389)
chr2 (1-59)||(14958797-14958855)
chr2 (1-59)||(39239919-39239977)
chr2 (1-57)||(16495927-16495983)
chr2 (151-216)||(16496087-16496152)
chr2 (151-190)||(14958665-14958704)
chr2 (153-216)||(5774623-5774686)
chr2 (1-59)||(30524357-30524414)
chr2 (1-59)||(34246037-34246095)
chr2 (151-189)||(42520352-42520390)
chr2 (157-216)||(43568894-43568953)
chr2 (1-59)||(43569066-43569123)
chr2 (11-59)||(6321391-6321439)
chr2 (151-216)||(8876201-8876266)
chr2 (11-59)||(11447801-11447849)
chr2 (153-189)||(14452824-14452860)
chr2 (153-189)||(33180989-33181025)
chr2 (153-189)||(36602246-36602282)
chr2 (151-190)||(10034190-10034229)
chr2 (155-190)||(34245900-34245935)
chr2 (155-189)||(6321665-6321699)
chr2 (155-189)||(33179500-33179534)
chr2 (153-189)||(6320078-6320114)
chr2 (11-59)||(14452962-14453010)
chr2 (11-59)||(14454155-14454203)
chr2 (11-59)||(18247386-18247434)
chr2 (151-187)||(30524219-30524255)
chr2 (11-59)||(33179633-33179681)
[»] chr7 (53 HSPs)
chr7 (1-59)||(4061325-4061383)
chr7 (1-59)||(27827447-27827505)
chr7 (1-59)||(28493582-28493640)
chr7 (1-59)||(46614982-46615040)
chr7 (1-59)||(48312871-48312929)
chr7 (1-59)||(6244564-6244622)
chr7 (1-59)||(42264610-42264668)
chr7 (1-59)||(42327464-42327522)
chr7 (1-59)||(43338351-43338409)
chr7 (1-59)||(46330352-46330410)
chr7 (1-59)||(46350153-46350211)
chr7 (1-59)||(46536813-46536871)
chr7 (151-216)||(27827280-27827345)
chr7 (151-216)||(35647936-35648001)
chr7 (151-216)||(43157817-43157882)
chr7 (151-216)||(46350312-46350377)
chr7 (151-216)||(46615139-46615204)
chr7 (151-216)||(48313032-48313097)
chr7 (151-190)||(31226387-31226426)
chr7 (151-190)||(43338213-43338252)
chr7 (1-56)||(46673341-46673396)
chr7 (1-59)||(28957468-28957526)
chr7 (1-55)||(29993407-29993461)
chr7 (1-59)||(31031309-31031367)
chr7 (1-59)||(43157974-43158032)
chr7 (151-216)||(28493742-28493807)
chr7 (151-216)||(31031464-31031529)
chr7 (151-216)||(42328534-42328599)
chr7 (151-216)||(46536649-46536714)
chr7 (151-216)||(46673172-46673237)
chr7 (155-190)||(6244428-6244463)
chr7 (152-216)||(42327624-42327688)
chr7 (1-59)||(31226242-31226300)
chr7 (153-216)||(42264775-42264838)
chr7 (153-189)||(1600825-1600861)
chr7 (155-216)||(28957621-28957682)
chr7 (11-59)||(41407657-41407705)
chr7 (153-189)||(43544421-43544457)
chr7 (1-59)||(42327062-42327120)
chr7 (1-59)||(42328373-42328431)
chr7 (11-57)||(42833021-42833067)
chr7 (11-59)||(585242-585290)
chr7 (153-189)||(585408-585444)
chr7 (11-59)||(595516-595564)
chr7 (151-216)||(4060847-4060912)
chr7 (151-216)||(29993750-29993815)
chr7 (153-189)||(33980312-33980348)
chr7 (11-59)||(33980458-33980506)
chr7 (153-189)||(41406729-41406765)
chr7 (11-55)||(42698173-42698217)
chr7 (153-189)||(42831741-42831777)
chr7 (157-189)||(42833199-42833231)
chr7 (11-59)||(43544254-43544302)
[»] chr5 (47 HSPs)
chr5 (1-59)||(6788924-6788982)
chr5 (1-59)||(34589234-34589292)
chr5 (1-59)||(36761840-36761898)
chr5 (1-59)||(42710010-42710068)
chr5 (151-216)||(15499201-15499266)
chr5 (1-59)||(77064-77122)
chr5 (1-59)||(12939080-12939138)
chr5 (1-59)||(12953165-12953223)
chr5 (1-59)||(15499366-15499424)
chr5 (1-59)||(16217659-16217717)
chr5 (1-59)||(23591358-23591416)
chr5 (1-59)||(24172062-24172120)
chr5 (1-59)||(29524675-29524733)
chr5 (1-59)||(37530056-37530114)
chr5 (1-59)||(41733624-41733682)
chr5 (151-216)||(6789079-6789144)
chr5 (151-216)||(16217823-16217888)
chr5 (151-216)||(22777742-22777807)
chr5 (151-216)||(23591188-23591253)
chr5 (151-216)||(29524834-29524899)
chr5 (151-216)||(34589396-34589461)
chr5 (151-216)||(35639333-35639398)
chr5 (151-216)||(41733771-41733836)
chr5 (151-216)||(42423225-42423290)
chr5 (151-216)||(42709843-42709908)
chr5 (151-190)||(76937-76976)
chr5 (151-190)||(11783710-11783749)
chr5 (151-190)||(12282204-12282243)
chr5 (1-59)||(11783538-11783596)
chr5 (1-59)||(12282349-12282407)
chr5 (152-190)||(12939249-12939287)
chr5 (152-190)||(12953333-12953371)
chr5 (1-59)||(27812364-27812422)
chr5 (1-59)||(35639490-35639548)
chr5 (151-216)||(7614509-7614574)
chr5 (151-216)||(27812519-27812584)
chr5 (151-190)||(24171931-24171970)
chr5 (1-59)||(5102152-5102210)
chr5 (1-59)||(7156797-7156855)
chr5 (1-59)||(7614360-7614418)
chr5 (1-59)||(22777903-22777961)
chr5 (153-189)||(3034570-3034606)
chr5 (151-216)||(37530215-37530280)
chr5 (1-59)||(24464286-24464343)
chr5 (153-186)||(15526363-15526396)
chr5 (14-59)||(37252689-37252734)
chr5 (153-189)||(8524397-8524433)
[»] chr3 (50 HSPs)
chr3 (1-59)||(1362409-1362467)
chr3 (1-59)||(8320778-8320836)
chr3 (1-59)||(8880093-8880151)
chr3 (1-59)||(30317297-30317355)
chr3 (1-59)||(35406284-35406342)
chr3 (1-59)||(36238575-36238633)
chr3 (151-214)||(17667324-17667387)
chr3 (1-59)||(34435327-34435385)
chr3 (1-59)||(51063573-51063631)
chr3 (151-216)||(2557368-2557433)
chr3 (151-216)||(19275628-19275693)
chr3 (7-59)||(23091111-23091163)
chr3 (151-216)||(34435486-34435551)
chr3 (151-216)||(35406120-35406185)
chr3 (151-216)||(41991148-41991213)
chr3 (151-190)||(8879948-8879987)
chr3 (151-190)||(30317450-30317489)
chr3 (1-59)||(30741186-30741244)
chr3 (1-59)||(54462779-54462837)
chr3 (155-190)||(36238433-36238468)
chr3 (151-190)||(54462925-54462964)
chr3 (156-190)||(1362264-1362298)
chr3 (1-55)||(2557210-2557264)
chr3 (1-59)||(4071400-4071458)
chr3 (1-59)||(6125454-6125512)
chr3 (13-59)||(7042402-7042448)
chr3 (1-59)||(17667490-17667548)
chr3 (1-59)||(41990990-41991048)
chr3 (153-216)||(48051524-48051587)
chr3 (1-59)||(52184341-52184399)
chr3 (1-59)||(19275780-19275834)
chr3 (151-216)||(8320941-8321006)
chr3 (11-59)||(42878483-42878531)
chr3 (153-189)||(43861280-43861316)
chr3 (11-55)||(48072718-48072762)
chr3 (11-58)||(32999154-32999201)
chr3 (11-58)||(48747941-48747988)
chr3 (151-190)||(51063436-51063475)
chr3 (151-190)||(52184490-52184529)
chr3 (1-55)||(54598766-54598821)
chr3 (1-59)||(20585704-20585762)
chr3 (1-59)||(50937607-50937665)
chr3 (153-186)||(43358822-43358855)
chr3 (153-189)||(7042281-7042317)
chr3 (153-189)||(39130625-39130661)
chr3 (153-189)||(42877773-42877809)
chr3 (11-59)||(46115589-46115637)
chr3 (11-59)||(46116256-46116304)
chr3 (157-189)||(50936230-50936262)
chr3 (11-59)||(52959906-52959954)
[»] chr1 (36 HSPs)
chr1 (1-59)||(39326300-39326358)
chr1 (1-59)||(45900823-45900881)
chr1 (1-59)||(47325914-47325972)
chr1 (1-59)||(50585554-50585612)
chr1 (1-59)||(1189457-1189515)
chr1 (1-59)||(3569715-3569773)
chr1 (1-59)||(11824276-11824334)
chr1 (1-59)||(12015384-12015442)
chr1 (151-214)||(27748138-27748201)
chr1 (1-59)||(30358768-30358826)
chr1 (1-59)||(36740211-36740269)
chr1 (151-216)||(3569872-3569937)
chr1 (151-216)||(30358602-30358667)
chr1 (151-216)||(39326132-39326197)
chr1 (151-216)||(45900666-45900731)
chr1 (151-190)||(1189616-1189655)
chr1 (1-56)||(46312009-46312064)
chr1 (151-190)||(50585713-50585752)
chr1 (1-59)||(12769927-12769985)
chr1 (1-59)||(27748291-27748349)
chr1 (153-216)||(46313439-46313502)
chr1 (151-188)||(11824136-11824173)
chr1 (151-216)||(12015209-12015274)
chr1 (151-216)||(36740043-36740108)
chr1 (154-190)||(38815074-38815110)
chr1 (151-216)||(47326080-47326145)
chr1 (151-190)||(38624634-38624673)
chr1 (153-216)||(28955048-28955111)
chr1 (1-55)||(38624774-38624828)
chr1 (153-189)||(11756349-11756385)
chr1 (1-59)||(28954895-28954950)
chr1 (1-59)||(31497192-31497250)
chr1 (155-189)||(44109463-44109497)
chr1 (153-189)||(4638947-4638983)
chr1 (153-189)||(23259794-23259830)
chr1 (1-29)||(28344657-28344685)
[»] scaffold0464 (2 HSPs)
scaffold0464 (1-59)||(5356-5414)
scaffold0464 (151-216)||(5188-5253)
[»] scaffold0325 (2 HSPs)
scaffold0325 (1-59)||(19063-19121)
scaffold0325 (151-190)||(18895-18934)
[»] chr6 (22 HSPs)
chr6 (1-59)||(5956986-5957044)
chr6 (1-59)||(12131190-12131248)
chr6 (1-59)||(13755644-13755702)
chr6 (1-59)||(22708008-22708066)
chr6 (1-59)||(24118535-24118593)
chr6 (1-59)||(25022298-25022356)
chr6 (151-216)||(20646215-20646280)
chr6 (151-216)||(24118694-24118759)
chr6 (151-190)||(12131045-12131084)
chr6 (1-55)||(18368936-18368990)
chr6 (1-59)||(20646383-20646441)
chr6 (153-216)||(20991804-20991867)
chr6 (153-216)||(25022450-25022513)
chr6 (11-59)||(32561770-32561818)
chr6 (156-216)||(21761679-21761739)
chr6 (1-59)||(21527539-21527597)
chr6 (1-55)||(32986286-32986340)
chr6 (11-59)||(13868017-13868065)
chr6 (153-189)||(32560460-32560496)
chr6 (151-190)||(32986437-32986476)
chr6 (153-189)||(13867829-13867865)
chr6 (11-59)||(32560602-32560650)
[»] scaffold0330 (2 HSPs)
scaffold0330 (1-59)||(7709-7767)
scaffold0330 (151-216)||(7557-7622)


Alignment Details
Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 40675419 - 40675361
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40675419 taaaaataatgtgtttggtaaaattaactattgaagtggctgataagtataaaatgaca 40675361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 6245043 - 6244985
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  6245043 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 6244985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 47633199 - 47633257
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  47633199 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 47633257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 19801173 - 19801231
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| || ||||||||||||    
T  19801173 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataaatataaaatgaca 19801231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 33984844 - 33984786
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||| ||||||| |||||||||||||||    
T  33984844 taaaaataatgtgtttggtaaaattagctgttgaaatggctgataagtataaaatgaca 33984786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 39839472 - 39839526
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaat 55  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||    
T  39839472 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaat 39839526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 43375387 - 43375329
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||||||||    
T  43375387 taaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgaca 43375329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 45559990 - 45560048
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||||||||    
T  45559990 taaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgaca 45560048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 49334531 - 49334589
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| || ||||||||||||    
T  49334531 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataaatataaaatgaca 49334589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 19801332 - 19801397
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  19801332 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 19801397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 33984681 - 33984616
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  33984681 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 33984616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 39839632 - 39839697
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  39839632 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 39839697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 44449052 - 44448987
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  44449052 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 44448987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 47633353 - 47633418
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  47633353 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 47633418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 49334690 - 49334755
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  49334690 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 49334755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 53284593 - 53284528
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  53284593 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 53284528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 43375226 - 43375162
Alignment:
Q  152 gtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  43375226 gtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 43375162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 317931 - 317989
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||| ||||||||| | |||||||| |||| |||||||||||||||    
T  317931 taaaaataatgtgtttgataaaattaattgttgaagtgactgataagtataaaatgaca 317989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 2942991 - 2943049
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||| ||||||| |||||||||| ||||    
T  2942991 taaaaataatgtgtttggtaaaattagctgttgaaatggctgataagtataaaaggaca 2943049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19802593 - 19802535
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||| |||||||||||||  | ||||||||||||| |||||||||||||||    
T  19802593 taaaaataatgtctttggtaaaattagttgttgaagtggctgataagtataaaatgaca 19802535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 37113702 - 37113760
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | |||| |||||||| |||||||||||||||    
T  37113702 taaaaataatgtgtttggtaaaattagatgttgatgtggctgataagtataaaatgaca 37113760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 44449212 - 44449154
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||| | ||||| |||||||||||||||    
T  44449212 taaaaataatgtgtttggtaaaattagctgttgaaatagctgataagtataaaatgaca 44449154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 53284753 - 53284695
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||||| || ||||||||||||    
T  53284753 taaaaataatgtgtttggtaaaattagttgttgaagtggctgataaatataaaatgaca 53284695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 54999448 - 54999502
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaat 55  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||||    
T  54999448 taaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaat 54999502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 55900423 - 55900481
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||| |  | ||||||||||||| |||||||||||||||    
T  55900423 taaaaataatgtgtttggtaaaatgagttgttgaagtggctgataagtataaaatgaca 55900481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 19802435 - 19802370
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||||||||||||||||||| |||||||||||||||||||       ||||||||| |||||||||    
T  19802435 ggtccctataaatattcaaatttttggtcttagtctccataaaaaaattcttcgacctttaatcct 19802370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 45560855 - 45560920
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||||||||||||||||||||||||||||||| |||||||       ||||||||| |||||||||    
T  45560855 ggtccctataaatattcaaacttttggtcttaatctccataaaaaaattcttcgacctttaatcct 45560920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 51942506 - 51942458
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||||||    
T  51942506 gtgtttggtaaaattagctattaaagtggctgataagtataaaatgaca 51942458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 2943145 - 2943184
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  2943145 ggtccttataaatattcaaacttttggtcttagtctccat 2943184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27537018 - 27536976
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctga 43  Q
    |||||||||| |||||||||||||||||| |||||||||||||    
T  27537018 taaaaataatctgtttggtaaaattaactgttgaagtggctga 27536976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 32013139 - 32013081
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | || ||||| |||| |||||||||||||||    
T  32013139 taaaaataatgtgtttggtaaaattagttgttaaagtgactgataagtataaaatgaca 32013081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 10658172 - 10658208
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||||| ||||||||||    
T  10658172 tccctataaatattcaaacttttggttttagtctcca 10658208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 10872317 - 10872353
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||||| ||||||||||    
T  10872317 tccctataaatattcaaacttttggttttagtctcca 10872353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 36180876 - 36180937
Alignment:
Q  155 cctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||| |||||||||    
T  36180876 cctataaatattcaaatttttggtcttagtctccataaaaaaattcttcgacctttaatcct 36180937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 43939467 - 43939515
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||  | ||||||||||||| |||||||||||||||    
T  43939467 gtgtttggtaaaattagttgttgaagtggctgataagtataaaatgaca 43939515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 49647909 - 49647957
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||| || ||||| ||||||| |||||||||||||||    
T  49647909 gtgtttggtaaaattagctgttgaaatggctgataagtataaaatgaca 49647957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 49648356 - 49648392
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||||| ||||||||||    
T  49648356 tccctataaatattcaaacttttggttttagtctcca 49648392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 26189032 - 26189071
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  26189032 ggtccctataaatatttaaacttttggttttagtctccat 26189071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36180712 - 36180767
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatg 56  Q
    ||||||||||||||||||||||||||  | ||||||||  ||| ||||||||||||    
T  36180712 taaaaataatgtgtttggtaaaattagttgttgaagtgattgataagtataaaatg 36180767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 6288440 - 6288394
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatga 57  Q
    ||||||||||||||||||| || |||||||||| || ||||||||||    
T  6288440 gtgtttggtaaaattaactgttcaagtggctgataaatataaaatga 6288394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 37113876 - 37113935
Alignment:
Q  157 tataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||| ||||||||||||||       ||||||||| |||||||||    
T  37113876 tataaatattcaaacttttagtcttagtctccataaaaaaattcttcgacctttaatcct 37113935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 48058002 - 48058044
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctga 43  Q
    ||||||||||||||||| ||||||||||| |||||||| ||||    
T  48058002 taaaaataatgtgtttgataaaattaactgttgaagtgactga 48058044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 189
Target Start/End: Original strand, 50791932 - 50791966
Alignment:
Q  155 cctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||| ||||||||||    
T  50791932 cctataaatattcaaacttttggttttagtctcca 50791966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 51941737 - 51941680
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||| |||||||||||||||||| |  | ||||||||||||| |||||||||||||||    
T  51941737 taaaagtaatgtgtttggtaaaat-agttgttgaagtggctgataagtataaaatgaca 51941680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 55345433 - 55345375
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||  || |||| | |||||||||||||    
T  55345433 taaaaataatgtgtttggtaaaattagctgttgatctgactgatatgtataaaatgaca 55345375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25421320 - 25421373
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaa 54  Q
    ||||| ||| |||||| |||||||||| | |||||||||||||||| |||||||    
T  25421320 taaaattaaagtgtttagtaaaattaattgttgaagtggctgacaaatataaaa 25421373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 6244883 - 6244851
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttag 183  Q
    |||||||||||||||||||| ||||||||||||    
T  6244883 ggtccctataaatattcaaatttttggtcttag 6244851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 10656905 - 10656857
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||  |||||||||| |||| || ||||||||||||    
T  10656905 gtgtttggtaaaattagatattgaagtgactgataaatataaaatgaca 10656857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 10658040 - 10658088
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||  | |||||||| |||| |||||||||||||||    
T  10658040 gtgtttggtaaaattagttgttgaagtgactgataagtataaaatgaca 10658088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 10871050 - 10871002
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||  |||||||||| |||| || ||||||||||||    
T  10871050 gtgtttggtaaaattagatattgaagtgactgataaatataaaatgaca 10871002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 10872185 - 10872233
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||  | |||||||| |||| |||||||||||||||    
T  10872185 gtgtttggtaaaattagttgttgaagtgactgataagtataaaatgaca 10872233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 50791414 - 50791378
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  50791414 tccctataaatattcaaacatttggttttagtctcca 50791378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 55345271 - 55345239
Alignment:
Q  158 ataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||| |||||||||||||||||||||||    
T  55345271 ataaatatttaaacttttggtcttagtctccat 55345239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 36860002 - 36859944
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  36860002 taaaaataatgtgtttggtaaaattaactgttgaagtggctgataagtataaaatgaca 36859944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 14912511 - 14912453
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  14912511 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 14912453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 35397365 - 35397423
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  35397365 taaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgaca 35397423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 38745434 - 38745492
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  38745434 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 38745492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 39734775 - 39734717
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  39734775 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 39734717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5575351 - 5575293
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||| ||||||||||||||| || ||||||||||||| |||||||||||||||    
T  5575351 taaaaataatatgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 5575293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 20696692 - 20696750
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||| | |||||||||||||||    
T  20696692 taaaaataatgtgtttggtaaaattagctgttgaagtggctaataagtataaaatgaca 20696750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 22215864 - 22215806
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||    
T  22215864 taaaaataatgtgtttggtaaaattagctgttgaagtggttgataagtataaaatgaca 22215806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 40530245 - 40530187
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| || ||||||||||||    
T  40530245 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataaatataaaatgaca 40530187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5839010 - 5838953
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgac 58  Q
    |||||||||||||||||||||||||| || ||||||| ||||| ||||||||||||||    
T  5839010 taaaaataatgtgtttggtaaaattagctgttgaagtagctgataagtataaaatgac 5838953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 3153791 - 3153843
Alignment:
Q  3 aaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaat 55  Q
    |||||||||||||||||||||||| || ||||||||||||| |||||||||||    
T  3153791 aaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaat 3153843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 20696847 - 20696912
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  20696847 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 20696912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 40530086 - 40530021
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  40530086 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 40530021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 3153943 - 3153982
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3153943 ggtccctataaatattcaaacttttggtcttagtctccat 3153982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 5838862 - 5838823
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5838862 ggtccctataaatattcaaacttttggtcttagtctccat 5838823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 17123255 - 17123216
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17123255 ggtccctataaatattcaaacttttggtcttagtctccat 17123216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 25100749 - 25100710
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25100749 ggtccctataaatattcaaacttttggtcttagtctccat 25100710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 36859844 - 36859805
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36859844 ggtccctataaatattcaaacttttggtcttagtctccat 36859805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 43800281 - 43800320
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43800281 ggtccctataaatattcaaacttttggtcttagtctccat 43800320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 285209 - 285151
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||| ||||||||||||||| | || ||||||||||||| |||||||||||||||    
T  285209 taaaaatattgtgtttggtaaaatgagctgttgaagtggctgataagtataaaatgaca 285151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 630668 - 630726
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||| ||||||||||||||| | || ||||||||||||| |||||||||||||||    
T  630668 taaaaatattgtgtttggtaaaatgagctgttgaagtggctgataagtataaaatgaca 630726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 816480 - 816538
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||| ||||||||||||||| | || ||||||||||||| |||||||||||||||    
T  816480 taaaaatattgtgtttggtaaaatgagctgttgaagtggctgataagtataaaatgaca 816538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 17123413 - 17123355
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||| ||| |||||||||||||||    
T  17123413 taaaaataatgtgtttggtaaaattagttgttgaagtggttgataagtataaaatgaca 17123355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 17155361 - 17155419
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||| |||||||| ||||| || ||||||||||||| |||||||||||||||    
T  17155361 taaaaataatgggtttggtataattagctgttgaagtggctgataagtataaaatgaca 17155419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 249
Target Start/End: Original strand, 17155519 - 17155617
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcctnnnnnnnnnttcacgacaattttgatctctgct 249  Q
    ||||| ||||||||||||||||||||||||||||||||||       ||||||||| |||||||||         ||||| ||||||||||||||||||    
T  17155519 ggtccgtataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcctaaaaaaatattcacaacaattttgatctctgct 17155617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25099566 - 25099624
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||| ||||| || ||||||||||||    
T  25099566 taaaaataatgtgtttggtaaaattagctgttgaagtagctgataaatataaaatgaca 25099624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35159599 - 35159653
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaat 55  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||||    
T  35159599 taaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaat 35159653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 35159759 - 35159822
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  35159759 tccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 35159822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 41669613 - 41669555
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||| | ||||||| || || |||||||||||||||    
T  41669613 taaaaataatgtgtttggtaaaattaattgttgaagttgcagataagtataaaatgaca 41669555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 43800132 - 43800190
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| || ||||||| ||||    
T  43800132 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataaatataaaaggaca 43800190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 5575189 - 5575152
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctcc 188  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5575189 ggtccctataaatattcaaacttttggtcttagtctcc 5575152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 14912375 - 14912310
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||||||||||||||||||||||||||| |||||||||||       ||||||||| |||||||||    
T  14912375 ggtccctataaatattcaaacttttggttttagtctccataaaaaagttcttcgacctttaatcct 14912310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 25099727 - 25099788
Alignment:
Q  155 cctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  25099727 cctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 25099788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 35397521 - 35397586
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||||||||||||||||||||||||||||||| |||||||       ||||||||| |||||||||    
T  35397521 ggtccctataaatattcaaacttttggtcttaatctccataaaaaaattcttcgacctttaatcct 35397586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 38746448 - 38746513
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||||||||||||||||||||||||||||||| |||||||       ||||||||| |||||||||    
T  38746448 ggtccctataaatattcaaacttttggtcttaatctccataaaaaaattcttcgacctttaatcct 38746513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 39734614 - 39734549
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||||||||||||||||||||||||||||||| |||||||       ||||||||| |||||||||    
T  39734614 ggtccctataaatattcaaacttttggtcttaatctccataaaaaaattcttcgacctttaatcct 39734549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 285050 - 285011
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  285050 ggtccctataaatattcaaacttttggttttagtctccat 285011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 630827 - 630866
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  630827 ggtccctataaatattcaaacttttggttttagtctccat 630866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 816639 - 816678
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  816639 ggtccctataaatattcaaacttttggttttagtctccat 816678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 25100902 - 25100848
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaat 55  Q
    ||||||||| ||||||||||||||||  | ||||||||||||| |||||||||||    
T  25100902 taaaaataacgtgtttggtaaaattagttgttgaagtggctgataagtataaaat 25100848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 190
Target Start/End: Original strand, 34615439 - 34615473
Alignment:
Q  156 ctataaatattcaaacttttggtcttagtctccat 190  Q
    |||||||||||||||||||||||||||||||||||    
T  34615439 ctataaatattcaaacttttggtcttagtctccat 34615473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 35020045 - 35020009
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||||| ||||||||||    
T  35020045 tccctataaatattcaaacttttggttttagtctcca 35020009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 35021027 - 35020979
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||| || ||||||||||||| || ||||||||||||    
T  35021027 gtgtttggtaaaattagctgttgaagtggctgataaatataaaatgaca 35020979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 22215714 - 22215675
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  22215714 ggtccctataaatattcaaacttctggtcttagtttccat 22215675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 41670327 - 41670280
Alignment:
Q  12 tgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||  | ||||||||||||| |||||||||||||||    
T  41670327 tgtttggtaaaattagttgttgaagtggctgataagtataaaatgaca 41670280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 40210397 - 40210359
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  40210397 ggtcgctataaatattcaaacttgtggtcttagtctcca 40210359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 40210510 - 40210452
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||| ||| ||||||| ||||||||| | ||||||| ||||| |||||||||||||||    
T  40210510 taaaattaaagtgtttgataaaattaattgttgaagtagctgataagtataaaatgaca 40210452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 5964715 - 5964763
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||| |||||||  |||| || ||||||||||||    
T  5964715 gtgtttggtaaaattaacttttgaagtaactgataaatataaaatgaca 5964763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 19142250 - 19142298
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||  | ||||||| ||||| |||||||||||||||    
T  19142250 gtgtttggtaaaattagttgttgaagttgctgataagtataaaatgaca 19142298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 35252531 - 35252579
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||| ||||| || |||| || ||||||||||||    
T  35252531 gtgtttggtaaaattaactgttgaactgactgataaatataaaatgaca 35252579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 42520550 - 42520492
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  42520550 taaaaataatgtgtttggtaaaattagctgttgaagtggctgacaagtataaaatgaca 42520492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 36935402 - 36935460
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  36935402 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 36935460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 36985978 - 36986036
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  36985978 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 36986036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 38325078 - 38325020
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  38325078 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 38325020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 1875484 - 1875549
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  1875484 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacttttaatcct 1875549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 18239928 - 18239863
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  18239928 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacttttaatcct 18239863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 1875325 - 1875383
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| || ||||||||||||    
T  1875325 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataaatataaaatgaca 1875383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5774842 - 5774784
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||||||||    
T  5774842 taaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgaca 5774784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 7455280 - 7455222
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| || ||||||||||||    
T  7455280 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataaatataaaatgaca 7455222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 18240104 - 18240046
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||| ||||||||| |||||||||||||||    
T  18240104 taaaaataatgtgtttggtaaaattagctgttggagtggctgataagtataaaatgaca 18240046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 7455118 - 7455053
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  7455118 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 7455053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 36935557 - 36935622
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  36935557 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 36935622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 38324913 - 38324848
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  38324913 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 38324848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 39240079 - 39240144
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  39240079 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 39240144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 36986138 - 36986177
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36986138 ggtccctataaatattcaaacttttggtcttagtctccat 36986177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 8876425 - 8876371
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaat 55  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||||    
T  8876425 taaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaat 8876371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 10034389 - 10034331
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||| ||| |||||||||||||||    
T  10034389 taaaaataatgtgtttggtaaaattagttgttgaagtggttgataagtataaaatgaca 10034331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 14958855 - 14958797
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||| |||||||||||||||  | ||||||||||||| |||||||||||||||    
T  14958855 taaaaataatatgtttggtaaaattagttgttgaagtggctgataagtataaaatgaca 14958797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 39239919 - 39239977
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||| ||||||||||||||||  | ||||||||||||| |||||||||||||||    
T  39239919 taaaaataacgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgaca 39239977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16495927 - 16495983
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatga 57  Q
    |||||||||||||||||||||||||| || |||||||| |||| || ||||||||||    
T  16495927 taaaaataatgtgtttggtaaaattagctgttgaagtgactgataaatataaaatga 16495983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 16496087 - 16496152
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||||||||||||||||||||||| |||||||||||||||       ||||||||| |||||||||    
T  16496087 ggtccctataaatattcaaactttaggtcttagtctccataaaaaaattcttcgacctttaatcct 16496152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 14958704 - 14958665
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  14958704 ggtccctataaatattcaaacttttgctcttagtctccat 14958665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 5774686 - 5774623
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||||| |||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  5774686 tccctagaaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 5774623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 30524414 - 30524357
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||| |||||||||||||  | ||||||||||||| |||||||||||||||    
T  30524414 taaaaataatgt-tttggtaaaattagttgttgaagtggctgataagtataaaatgaca 30524357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 34246095 - 34246037
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||| |||| |||||||| || ||||||||||||| || ||||||||||||    
T  34246095 taaaaataatgtttttgttaaaattagctgttgaagtggctgataaatataaaatgaca 34246037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 42520390 - 42520352
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  42520390 ggtccctataaatattcaaacttttggtcttaatctcca 42520352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 43568953 - 43568894
Alignment:
Q  157 tataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||||||||||||||||||||||||||||| |||       |||||||||||||||||||    
T  43568953 tataaatattcaaacttttggtcttagtcttcataaaaaaattcttcgacttttaatcct 43568894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 43569123 - 43569066
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||| ||| || |||||||| |||| |||||||||||||||    
T  43569123 taaaaataatgtgtttggtaaagttagct-ttgaagtgactgataagtataaaatgaca 43569066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 6321391 - 6321439
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||| |||||||| || ||||||||||||| |||||||||||||||    
T  6321391 gtgtttgataaaattagctgttgaagtggctgataagtataaaatgaca 6321439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 8876266 - 8876201
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||| |||||||||||||||||||||||| |||||||       ||||||||| |||||||||    
T  8876266 ggtccctctaaatattcaaacttttggtcttaatctccataaaaaaattcttcgacctttaatcct 8876201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 11447849 - 11447801
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||| ||||||||| ||| || ||||||||||||    
T  11447849 gtgtttggtaaaattaactgttgaagtggttgataaatataaaatgaca 11447801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 14452860 - 14452824
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||||| ||||||||||    
T  14452860 tccctataaatattcaaacttttggttttagtctcca 14452824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 33180989 - 33181025
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||||| ||||||||||    
T  33180989 tccctataaatattcaaacttttggttttagtctcca 33181025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 36602246 - 36602282
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||||| ||||||||||    
T  36602246 tccctataaatattcaaacttttggttttagtctcca 36602282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 10034229 - 10034190
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  10034229 ggtccctataaatatccaaactttttgtcttagtctccat 10034190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 190
Target Start/End: Complemental strand, 34245935 - 34245900
Alignment:
Q  155 cctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||| ||||||||||||||    
T  34245935 cctataaatattcaaacttttagtcttagtctccat 34245900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 189
Target Start/End: Original strand, 6321665 - 6321699
Alignment:
Q  155 cctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||| ||||||||||    
T  6321665 cctataaatattcaaacttttggttttagtctcca 6321699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 189
Target Start/End: Complemental strand, 33179534 - 33179500
Alignment:
Q  155 cctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||| ||||||||||    
T  33179534 cctataaatattcaaacttttggttttagtctcca 33179500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 6320114 - 6320078
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||||| |||| |||||    
T  6320114 tccctataaatattcaaacttttggttttagcctcca 6320078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 14453010 - 14452962
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||  | ||||||||||||| || ||||||||||||    
T  14453010 gtgtttggtaaaattagatgttgaagtggctgataaatataaaatgaca 14452962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 14454155 - 14454203
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||  | ||||||||||| | |||||||||||||||    
T  14454155 gtgtttggtaaaattagttgttgaagtggctaataagtataaaatgaca 14454203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 18247434 - 18247386
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||  | |||||||| |||| |||||||||||||||    
T  18247434 gtgtttggtaaaattagttgttgaagtgactgataagtataaaatgaca 18247386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 30524255 - 30524219
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctc 187  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  30524255 ggtccctataaatattcaaactttttgtctaagtctc 30524219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 33179681 - 33179633
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||| |||||||| || ||||||||| ||| |||||||||||||||    
T  33179681 gtgtttgataaaattagctgttgaagtggttgataagtataaaatgaca 33179633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 4061383 - 4061325
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  4061383 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 4061325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 27827505 - 27827447
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  27827505 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 27827447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 28493582 - 28493640
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  28493582 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 28493640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 46614982 - 46615040
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  46614982 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 46615040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 48312871 - 48312929
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  48312871 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 48312929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 6244622 - 6244564
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||| ||||| |||||||||||||||    
T  6244622 taaaaataatgtgtttggtaaaattagctgttgaagtagctgataagtataaaatgaca 6244564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 42264610 - 42264668
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| |||||||||| | ||| |||||||||||||||    
T  42264610 taaaaataatgtgtttggtaaaattagctattgaagtagatgataagtataaaatgaca 42264668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 42327464 - 42327522
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||    
T  42327464 taaaaataatgtgtttggtaaaattagctgttgaagtggttgataagtataaaatgaca 42327522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 43338409 - 43338351
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||||||||    
T  43338409 taaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgaca 43338351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 46330410 - 46330352
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||| ||||||||||||||||||||||| || |||||||||| |||||||||||||||    
T  46330410 taaaattaatgtgtttggtaaaattaactgttaaagtggctgataagtataaaatgaca 46330352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 46350153 - 46350211
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||| |||||||| || ||||||||||||| |||||||||||||||    
T  46350153 taaaaataatgtgtttgataaaattagctgttgaagtggctgataagtataaaatgaca 46350211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 46536871 - 46536813
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || |||||||| |||| |||||||||||||||    
T  46536871 taaaaataatgtgtttggtaaaattagctgttgaagtgactgataagtataaaatgaca 46536813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 27827345 - 27827280
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  27827345 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 27827280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 35648001 - 35647936
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  35648001 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 35647936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 43157882 - 43157817
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  43157882 ggtccctataaatattcaaacttttggtcttagtctccataaaattattcttcgacctttaatcct 43157817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 46350312 - 46350377
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  46350312 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 46350377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 46615139 - 46615204
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  46615139 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 46615204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 48313032 - 48313097
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  48313032 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 48313097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 31226387 - 31226426
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  31226387 ggtccctataaatattcaaacttttggtcttagtctccat 31226426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 43338252 - 43338213
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43338252 ggtccctataaatattcaaacttttggtcttagtctccat 43338213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 46673396 - 46673341
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatg 56  Q
    ||||||||||||||||||||||||||  | ||||||||||||| ||||||||||||    
T  46673396 taaaaataatgtgtttggtaaaattagtttttgaagtggctgataagtataaaatg 46673341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 28957468 - 28957526
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||| ||||    
T  28957468 taaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaaggaca 28957526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 29993407 - 29993461
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaat 55  Q
    |||||||||||| ||||||||||||| || ||||||||||||| |||||||||||    
T  29993407 taaaaataatgtctttggtaaaattagctgttgaagtggctgataagtataaaat 29993461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 31031309 - 31031367
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||||| || ||||||||||||    
T  31031309 taaaaataatgtgtttggtaaaattagttgttgaagtggctgataaatataaaatgaca 31031367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 43158032 - 43157974
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | |||||||| |||| |||||||||||||||    
T  43158032 taaaaataatgtgtttggtaaaattagttgttgaagtgactgataagtataaaatgaca 43157974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 28493742 - 28493807
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||||||||||||||||||||||||||| |||||||||||       ||||||||| |||||||||    
T  28493742 ggtccctataaatattcaaacttttggttttagtctccataaaaaaattcttcgacctttaatcct 28493807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 31031464 - 31031529
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||||||||||||||||||||||||| |||||||||||||       ||||||||| |||||||||    
T  31031464 ggtccctataaatattcaaacttttgatcttagtctccataaaaaaattcttcgacctttaatcct 31031529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 42328534 - 42328599
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||| ||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  42328534 ggtccttataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 42328599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 46536714 - 46536649
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||| |||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  46536714 ggtctctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 46536649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 46673237 - 46673172
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||| ||||||||       ||||||||| |||||||||    
T  46673237 ggtccctataaatattcaaacttttggtcttggtctccataaaaaaattcttcgacctttaatcct 46673172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 190
Target Start/End: Complemental strand, 6244463 - 6244428
Alignment:
Q  155 cctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||||||||||||||||    
T  6244463 cctataaatattcaaacttttggtcttagtctccat 6244428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 42327624 - 42327688
Alignment:
Q  152 gtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||| |||||||||||       ||||||||| |||||||||    
T  42327624 gtccctataaatattcaaacttttggttttagtctccataaaaaaattcttcgacctttaatcct 42327688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 31226242 - 31226300
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | |||||||| |||| |||||||||| ||||    
T  31226242 taaaaataatgtgtttggtaaaattagttgttgaagtgactgataagtataaaaggaca 31226300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 42264775 - 42264838
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||| ||||||||||||       ||||||||| |||||||||    
T  42264775 tccctataaatattcaaacttttggccttagtctccataaaaaaattcttcgacctttaatcct 42264838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 1600825 - 1600861
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||||| ||||||||||    
T  1600825 tccctataaatattcaaacttttggttttagtctcca 1600861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 28957621 - 28957682
Alignment:
Q  155 cctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||| |||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  28957621 cctagaaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 28957682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 41407705 - 41407657
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||| ||| ||||||||||||| | |||||||||||||    
T  41407705 gtgtttggtaaaattgactgttgaagtggctgataggtataaaatgaca 41407657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 43544421 - 43544457
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||||| ||||||||||    
T  43544421 tccctataaatattcaaacttttggttttagtctcca 43544457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 42327062 - 42327120
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||| ||||||||||| ||||| || |||| |  ||||||||||||    
T  42327062 taaaaataatgtgtttgataaaattaactgttgaaatgactgatacatataaaatgaca 42327120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 42328373 - 42328431
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||| | || |||| |||||||    
T  42328373 taaaaataatgtgtttggtaaaattagttgttgaagtggctaataaatatataatgaca 42328431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 42833021 - 42833067
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatga 57  Q
    ||||||||||||||||  | ||||||||||||| |||||||||||||    
T  42833021 gtgtttggtaaaattagttgttgaagtggctgataagtataaaatga 42833067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 585242 - 585290
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||| ||||||||||  | ||||||||||||| |||||||||||||||    
T  585242 gtgttaggtaaaattagttgttgaagtggctgataagtataaaatgaca 585290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 585408 - 585444
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  585408 tccctataaatattcaaacttttggttttaatctcca 585444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 595516 - 595564
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||  | |||||||| |||| |||||||||||||||    
T  595516 gtgtttggtaaaattagttgttgaagtgtctgataagtataaaatgaca 595564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 4060912 - 4060847
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||||| ||||| ||||||||||||||| |||||||||||       ||||||||| |||||||||    
T  4060912 ggtccccataaacattcaaacttttggttttagtctccataaaaaaattcttcgacctttaatcct 4060847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 29993750 - 29993815
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||||||||||||||||||||||||||| ||| ||| |||       ||||||||| |||||||||    
T  29993750 ggtccctataaatattcaaacttttggttttaatcttcataaaaaaattcttcgacctttaatcct 29993815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 33980348 - 33980312
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  33980348 tccctataaatattcaaatttttggttttagtctcca 33980312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 33980506 - 33980458
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||  | ||||||||||||| |||||| ||||||||    
T  33980506 gtgtttggtaaaattagttgttgaagtggctgataagtatcaaatgaca 33980458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 41406765 - 41406729
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  41406765 tccctataaatatttaaacttttggttttagtctcca 41406729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 42698217 - 42698173
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaat 55  Q
    |||||||||||||||||||  |||||||||||| || ||||||||    
T  42698217 gtgtttggtaaaattaactgctgaagtggctgataaatataaaat 42698173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 42831777 - 42831741
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  42831777 tcccgataaatattcaaacttttggttttagtctcca 42831741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 189
Target Start/End: Original strand, 42833199 - 42833231
Alignment:
Q  157 tataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||| ||||||||||    
T  42833199 tataaatattcaaacttttggttttagtctcca 42833231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 43544254 - 43544302
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||| ||||||||||  | ||||||||||||| |||||||||||||||    
T  43544254 gtgttaggtaaaattagttgttgaagtggctgataagtataaaatgaca 43544302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 6788924 - 6788982
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  6788924 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 6788982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 34589234 - 34589292
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  34589234 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 34589292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 36761898 - 36761840
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  36761898 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 36761840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 42710068 - 42710010
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  42710068 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 42710010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 15499266 - 15499201
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  15499266 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacttttaatcct 15499201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 77122 - 77064
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||||||||    
T  77122 taaaaataatgtgtttggtaaaattagatgttgaagtggctgataagtataaaatgaca 77064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12939080 - 12939138
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||||||||    
T  12939080 taaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgaca 12939138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12953165 - 12953223
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||||||||    
T  12953165 taaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgaca 12953223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 15499424 - 15499366
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| || ||||||||||||    
T  15499424 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataaatataaaatgaca 15499366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 16217659 - 16217717
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||||||||    
T  16217659 taaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgaca 16217717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 23591416 - 23591358
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || |||||||| |||| |||||||||||||||    
T  23591416 taaaaataatgtgtttggtaaaattagctgttgaagtgtctgataagtataaaatgaca 23591358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 24172120 - 24172062
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || |||||||| |||| |||||||||||||||    
T  24172120 taaaaataatgtgtttggtaaaattagctgttgaagtgactgataagtataaaatgaca 24172062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 29524675 - 29524733
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| || ||||||||||||    
T  29524675 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataaatataaaatgaca 29524733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 37530056 - 37530114
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| || ||||||||||||    
T  37530056 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataaatataaaatgaca 37530114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 41733624 - 41733682
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||||| |||||||  |||| |||||||||||||||    
T  41733624 taaaaataatgtgtttggtaaaattaactgttgaagtaactgataagtataaaatgaca 41733682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 6789079 - 6789144
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  6789079 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 6789144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 16217823 - 16217888
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  16217823 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 16217888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 22777807 - 22777742
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  22777807 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 22777742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 23591253 - 23591188
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  23591253 ggtccctataaatattcaaacttttggtcttagtctccataaaataattcttcgacctttaatcct 23591188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 29524834 - 29524899
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  29524834 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 29524899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 34589396 - 34589461
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  34589396 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 34589461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 35639398 - 35639333
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  35639398 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 35639333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 41733771 - 41733836
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  41733771 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 41733836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 42423290 - 42423225
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  42423290 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 42423225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 42709908 - 42709843
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  42709908 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 42709843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 76976 - 76937
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  76976 ggtccctataaatattcaaacttttggtcttagtctccat 76937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 11783710 - 11783749
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11783710 ggtccctataaatattcaaacttttggtcttagtctccat 11783749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 12282243 - 12282204
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12282243 ggtccctataaatattcaaacttttggtcttagtctccat 12282204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 11783538 - 11783596
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || | ||| ||||||| |||||||||||||||    
T  11783538 taaaaataatgtgtttggtaaaattagctgtcgaaatggctgataagtataaaatgaca 11783596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 12282407 - 12282349
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||| | ||||| |||||||||||||||    
T  12282407 taaaaataatgtgtttggtaaaattagctgttgaaatagctgataagtataaaatgaca 12282349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 12939249 - 12939287
Alignment:
Q  152 gtccctataaatattcaaacttttggtcttagtctccat 190  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12939249 gtccctataaatattcaaacttttggtcttagtctccat 12939287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 12953333 - 12953371
Alignment:
Q  152 gtccctataaatattcaaacttttggtcttagtctccat 190  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12953333 gtccctataaatattcaaacttttggtcttagtctccat 12953371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 27812364 - 27812422
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || || ||||| |||| |||||||||||||||    
T  27812364 taaaaataatgtgtttggtaaaattagctgttaaagtgactgataagtataaaatgaca 27812422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 35639548 - 35639490
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||| |||| |||||||| || ||||||||||||| |||||||||||||||    
T  35639548 taaaaataatgtatttgataaaattagctgttgaagtggctgataagtataaaatgaca 35639490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 7614509 - 7614574
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||| ||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  7614509 ggtccttataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 7614574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 27812519 - 27812584
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||||||||||||||||||||||||||||||||| |||||       ||||||||| |||||||||    
T  27812519 ggtccctataaatattcaaacttttggtcttagtatccataaaaaaattcttcgacctttaatcct 27812584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 24171970 - 24171931
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  24171970 ggtccctataaattttcaaacttttggtcttagtctccat 24171931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 5102152 - 5102210
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||| ||||||||  | ||||||||||||| || ||||||||||||    
T  5102152 taaaaataatgtgtttgataaaattagttgttgaagtggctgataaatataaaatgaca 5102210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7156797 - 7156855
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || |||||||| ||||  | ||||||||||||    
T  7156797 taaaaataatgtgtttggtaaaattagctgttgaagtgactgattaatataaaatgaca 7156855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7614360 - 7614418
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||| |||||||| || ||| ||||| ||| |||||||||||||||    
T  7614360 taaaaataatgtgtttgataaaattagctgttggagtggttgataagtataaaatgaca 7614418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 22777961 - 22777903
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||| ||||||||||||| |  ||||||||| ||| |||||||||||||||    
T  22777961 taaaaataatgtttttggtaaaattagccgttgaagtggttgataagtataaaatgaca 22777903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 3034606 - 3034570
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||||| ||||||||||    
T  3034606 tccctataaatattcaaacttttggttttagtctcca 3034570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 37530215 - 37530280
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||| |||||||||||| |||||||       ||||||||| |||||||||    
T  37530215 ggtccctataaatattcaatcttttggtcttaatctccataaaaaaattcttcgacctttaatcct 37530280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 24464343 - 24464286
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||  ||||||||| ||||||||| ||| |||||| ||||||||    
T  24464343 taaaaataatgtgtttgg-caaattaacttttgaagtggttgataagtatgaaatgaca 24464286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 15526363 - 15526396
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtct 186  Q
    |||||||||||||||||||||||||| |||||||    
T  15526363 tccctataaatattcaaacttttggttttagtct 15526396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 37252689 - 37252734
Alignment:
Q  14 tttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||  | ||||||||||||| |||||||||||||||    
T  37252689 tttggtaaaattagatgttgaagtggctgataagtataaaatgaca 37252734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 8524433 - 8524397
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  8524433 tccctataaatattcaaacttttggttttaatctcca 8524397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 1362467 - 1362409
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  1362467 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 1362409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 8320778 - 8320836
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  8320778 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 8320836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 8880151 - 8880093
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  8880151 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 8880093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 30317297 - 30317355
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  30317297 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 30317355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 35406342 - 35406284
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  35406342 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 35406284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 36238633 - 36238575
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  36238633 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 36238575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 17667387 - 17667324
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatc 214  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  17667387 ggtccctataaatattcaaacttttggtcttagtctccataaaaaatttcttcgacttttaatc 17667324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 34435327 - 34435385
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| || ||||||||||||    
T  34435327 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataaatataaaatgaca 34435385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 51063631 - 51063573
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||||||||    
T  51063631 taaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgaca 51063573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 2557368 - 2557433
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  2557368 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 2557433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 19275693 - 19275628
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||| ||||||       |||||||||||||||||||    
T  19275693 ggtccctataaatattcaaacttttggtcttagcctccattaaaaatttcttcgacttttaatcct 19275628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 23091111 - 23091163
Alignment:
Q  7 taatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||| |||||| |||||| |||||||||||||||    
T  23091111 taatgtgtttggtaaaattaactgttgaaggggctgataagtataaaatgaca 23091163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 34435486 - 34435551
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  34435486 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 34435551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 35406185 - 35406120
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  35406185 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 35406120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 41991148 - 41991213
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  41991148 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 41991213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 8879987 - 8879948
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8879987 ggtccctataaatattcaaacttttggtcttagtctccat 8879948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 30317450 - 30317489
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30317450 ggtccctataaatattcaaacttttggtcttagtctccat 30317489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 30741186 - 30741244
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || |||||||| |||| |||||||||| ||||    
T  30741186 taaaaataatgtgtttggtaaaattagctgttgaagtgactgataagtataaaaggaca 30741244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 54462779 - 54462837
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||||| || ||||||||||||    
T  54462779 taaaaataatgtgtttggtaaaattagttgttgaagtggctgataaatataaaatgaca 54462837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 190
Target Start/End: Complemental strand, 36238468 - 36238433
Alignment:
Q  155 cctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||||||||||||||||    
T  36238468 cctataaatattcaaacttttggtcttagtctccat 36238433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 54462925 - 54462964
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  54462925 ggtccctataaatattcaaatttttggtcttagtctccat 54462964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 190
Target Start/End: Complemental strand, 1362298 - 1362264
Alignment:
Q  156 ctataaatattcaaacttttggtcttagtctccat 190  Q
    |||||||||||||||||||||||||||||||||||    
T  1362298 ctataaatattcaaacttttggtcttagtctccat 1362264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 2557210 - 2557264
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaat 55  Q
    ||||||||||||||||| |||||||| || || |||||||||| |||||||||||    
T  2557210 taaaaataatgtgtttgataaaattagctgttaaagtggctgataagtataaaat 2557264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 4071458 - 4071400
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||| ||| ||||||||||||||||||| ||||| | |||||||| ||||||||||||    
T  4071458 taaaattaaagtgtttggtaaaattaactgttgaaatagctgacaaatataaaatgaca 4071400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 6125512 - 6125454
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||| | |||||||| ||||  | ||||||||||||    
T  6125512 taaaaataatgtgtttggtaaaattaattgttgaagtgactgattaatataaaatgaca 6125454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 7042448 - 7042402
Alignment:
Q  13 gtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||| || ||||||||||||| |||||||||||||||    
T  7042448 gtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 7042402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 17667548 - 17667490
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||| ||||||||||||||||||  | ||||||||||| | |||||||||||||||    
T  17667548 taaaaatgatgtgtttggtaaaattagatgttgaagtggctaataagtataaaatgaca 17667490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 41990990 - 41991048
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || || |||| ||||| || ||||||||||||    
T  41990990 taaaaataatgtgtttggtaaaattagctgttaaagttgctgataaatataaaatgaca 41991048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 48051587 - 48051524
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||| ||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  48051587 tccctgtaaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 48051524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 52184341 - 52184399
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||| ||||||||||||||||  | ||||||||||||| | |||||||||||||    
T  52184341 taaaaataacgtgtttggtaaaattagttgttgaagtggctgataggtataaaatgaca 52184399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19275834 - 19275780
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| |    ||||||||||| |||||||||||||||    
T  19275834 taaaaataatgtgtttggtaaaattagc----gaagtggctgataagtataaaatgaca 19275780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 8320941 - 8321006
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||||||||||||||||||| |||||| ||||||||||||       ||||||||| |||||||||    
T  8320941 ggtccctataaatattcaaatttttggccttagtctccataaaaaaattcttcgacctttaatcct 8321006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 42878531 - 42878483
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||| |||||||||| || ||||||||||||| |||||||||||||||    
T  42878531 gtgttaggtaaaattagctgttgaagtggctgataagtataaaatgaca 42878483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 43861316 - 43861280
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||||| ||||||||||    
T  43861316 tccctataaatattcaaacttttggttttagtctcca 43861280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 48072762 - 48072718
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaat 55  Q
    |||||||||||||||| || ||||||||||||| |||||||||||    
T  48072762 gtgtttggtaaaattagctgttgaagtggctgataagtataaaat 48072718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 32999154 - 32999201
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgac 58  Q
    ||||||||||||||||||| || |||||||||| || |||||||||||    
T  32999154 gtgtttggtaaaattaactgttcaagtggctgataaatataaaatgac 32999201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 48747988 - 48747941
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgac 58  Q
    ||||||||||||||||||| ||||||| ||||| || |||||||||||    
T  48747988 gtgtttggtaaaattaactgttgaagtagctgataaatataaaatgac 48747941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 51063475 - 51063436
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  51063475 ggtccttataaatattcaaacttttgatcttagtctccat 51063436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 52184490 - 52184529
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  52184490 ggtccctataaatattcaaatttttggtcttagtttccat 52184529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 54598821 - 54598766
Alignment:
Q  1 taaaaataatgtgtttggt-aaaattaactattgaagtggctgacaagtataaaat 55  Q
    ||||||||||||||||||| |||||||  | ||||||||||||| |||||||||||    
T  54598821 taaaaataatgtgtttggtaaaaattagttgttgaagtggctgataagtataaaat 54598766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 20585704 - 20585762
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||| |||||||||||||  | ||||||||||| | |||||||||| ||||    
T  20585704 taaaaataatgtatttggtaaaattagttgttgaagtggctcataagtataaaaggaca 20585762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 50937607 - 50937665
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||| ||| ||||||||||||||||  | |||||||| |||| |||||||||||||||    
T  50937607 taaaattaaagtgtttggtaaaattagatgttgaagtgactgataagtataaaatgaca 50937665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 43358822 - 43358855
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtct 186  Q
    |||||||||||||||||||||||||| |||||||    
T  43358822 tccctataaatattcaaacttttggttttagtct 43358855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 7042317 - 7042281
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  7042317 tccctataaatattcaaacttttggttttaatctcca 7042281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 39130661 - 39130625
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||| | ||||||||||    
T  39130661 tccctataaatattcaaacttttgattttagtctcca 39130625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 42877809 - 42877773
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  42877809 tccctataaatagtcaaacttttggttttagtctcca 42877773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 46115637 - 46115589
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||| || |||||||| |||| || ||||||||||||    
T  46115637 gtgtttggtaaaattagctgttgaagtgactgataaatataaaatgaca 46115589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 46116304 - 46116256
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||| || |||||||| |||| || ||||||||||||    
T  46116304 gtgtttggtaaaattagctgttgaagtgactgataaatataaaatgaca 46116256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 189
Target Start/End: Complemental strand, 50936262 - 50936230
Alignment:
Q  157 tataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||| ||||||||||    
T  50936262 tataaatattcaaacttttggttttagtctcca 50936230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 52959954 - 52959906
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||  |||||| ||||| || ||||||||||||    
T  52959954 gtgtttggtaaaattaactgctgaagtagctgataaatataaaatgaca 52959906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 39326358 - 39326300
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  39326358 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 39326300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 45900881 - 45900823
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  45900881 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 45900823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 47325914 - 47325972
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  47325914 taaaaataatgtgtttggtaaaattagctattgaagtggatgataagtataaaatgaca 47325972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 50585554 - 50585612
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  50585554 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 50585612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 1189457 - 1189515
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||||||||    
T  1189457 taaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgaca 1189515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 3569715 - 3569773
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||||||||    
T  3569715 taaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgaca 3569773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 11824334 - 11824276
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||||||||    
T  11824334 taaaaataatgtgtttggtaaaattagatgttgaagtggctgataagtataaaatgaca 11824276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 12015442 - 12015384
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| || ||||||||||||    
T  12015442 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataaatataaaatgaca 12015384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 27748201 - 27748138
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatc 214  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  27748201 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacttttaatc 27748138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 30358826 - 30358768
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| || ||||||||||||    
T  30358826 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataaatataaaatgaca 30358768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 36740269 - 36740211
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||| |||||||| || ||||||||||||| |||||||||||||||    
T  36740269 taaaaataatgtgtttgataaaattagctgttgaagtggctgataagtataaaatgaca 36740211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 3569872 - 3569937
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  3569872 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 3569937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 30358667 - 30358602
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  30358667 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 30358602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 39326197 - 39326132
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  39326197 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 39326132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 45900731 - 45900666
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  45900731 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 45900666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 1189616 - 1189655
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1189616 ggtccctataaatattcaaacttttggtcttagtctccat 1189655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46312009 - 46312064
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatg 56  Q
    |||||||||| ||||||||||||||| || ||||||||||||| ||||||||||||    
T  46312009 taaaaataatatgtttggtaaaattagctgttgaagtggctgataagtataaaatg 46312064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 50585713 - 50585752
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  50585713 ggtccctataaatattcaaacttttggtcttagtctccat 50585752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12769927 - 12769985
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || | || |||||||| |||||||||||||||    
T  12769927 taaaaataatgtgtttggtaaaattagctgtcgatgtggctgataagtataaaatgaca 12769985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 27748349 - 27748291
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||| ||||||||||||| || ||||||||| ||| |||||||||||||||    
T  27748349 taaaaataatgtatttggtaaaattagctgttgaagtggttgataagtataaaatgaca 27748291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 46313439 - 46313502
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  46313439 tccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 46313502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 11824173 - 11824136
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctcc 188  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11824173 ggtccctataaatattcaaacttttggtcttagtctcc 11824136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 12015274 - 12015209
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||||||||||||||| |||||||||||||||||||||||       ||||||||| |||||||||    
T  12015274 ggtccctataaatatttaaacttttggtcttagtctccataataaaattcttcgacctttaatcct 12015209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 36740108 - 36740043
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||| |||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  36740108 ggtctctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 36740043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 38815074 - 38815110
Alignment:
Q  154 ccctataaatattcaaacttttggtcttagtctccat 190  Q
    |||||||||||||||||||||||||||||||||||||    
T  38815074 ccctataaatattcaaacttttggtcttagtctccat 38815110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 47326080 - 47326145
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||| ||||||||||||       ||||||||| |||||||||    
T  47326080 ggtccctataaatattcaaacttttggccttagtctccataaaaaaattcttcgacctttaatcct 47326145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 38624673 - 38624634
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  38624673 ggtccctataaatattcaaacttttggtcctagtctccat 38624634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 28955048 - 28955111
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||||||||||||||||||||||| |||||||||||||       ||||||||| |||||||||    
T  28955048 tccctataaatattcaaacttttgatcttagtctccataaaaaaattcttcgacctttaatcct 28955111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 38624828 - 38624774
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaat 55  Q
    ||||||||||||||||| ||||||||  | ||||||||||||| |||||||||||    
T  38624828 taaaaataatgtgtttgataaaattagttgttgaagtggctgataagtataaaat 38624774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 11756349 - 11756385
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||||| ||||||||||    
T  11756349 tccctataaatattcaaacttttggttttagtctcca 11756385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 28954895 - 28954950
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||| | ||||||||   || |||||||||||||||    
T  28954895 taaaaataatgtgtttggtaaaattaattgttgaagtg---gataagtataaaatgaca 28954950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 31497250 - 31497192
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||| ||||||||  | ||||| || |||| |||||||||||||||    
T  31497250 taaaaataatgtgtttgataaaattagttgttgaaatgactgataagtataaaatgaca 31497192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 189
Target Start/End: Original strand, 44109463 - 44109497
Alignment:
Q  155 cctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||| ||||||||||    
T  44109463 cctataaatattcaaacttttggttttagtctcca 44109497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 4638983 - 4638947
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||| | ||||||||||    
T  4638983 tccctataaatattcaaacttttgattttagtctcca 4638947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 23259830 - 23259794
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||||| |||| |||||    
T  23259830 tccctataaatattcaaacttttggttttagactcca 23259794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 28344685 - 28344657
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaact 29  Q
    |||||||||||||||||||||||||||||    
T  28344685 taaaaataatgtgtttggtaaaattaact 28344657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5414 - 5356
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || |||||||| |||| |||||||||||||||    
T  5414 taaaaataatgtgtttggtaaaattagctcttgaagtgcctgataagtataaaatgaca 5356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 5253 - 5188
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  5253 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 5188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19121 - 19063
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||||||||    
T  19121 taaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgaca 19063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 18934 - 18895
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  18934 ggtccctataaatattcaaacttttgggcttagtctccat 18895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5957044 - 5956986
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||||||||    
T  5957044 taaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgaca 5956986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 12131248 - 12131190
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||||||||    
T  12131248 taaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgaca 12131190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13755644 - 13755702
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||||||||    
T  13755644 taaaaataatgtgtttggtaaaattagatgttgaagtggctgataagtataaaatgaca 13755702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 22708066 - 22708008
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| || ||||||||||||    
T  22708066 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataaatataaaatgaca 22708008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 24118535 - 24118593
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||||||||||||| || ||||||||||||| || ||||||||||||    
T  24118535 taaaaataatgtgtttggtaaaattagctgttgaagtggctgataaatataaaatgaca 24118593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25022298 - 25022356
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||||||||    
T  25022298 taaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgaca 25022356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 20646280 - 20646215
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  20646280 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 20646215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 24118694 - 24118759
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  24118694 ggtccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 24118759  T

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Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 12131084 - 12131045
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12131084 ggtccctataaatattcaaacttttggtcttagtctccat 12131045  T

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Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18368936 - 18368990
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaat 55  Q
    |||||||||||||||||||||||||| || |||||||| |||| |||||||||||    
T  18368936 taaaaataatgtgtttggtaaaattagctgttgaagtgactgataagtataaaat 18368990  T

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Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 20646441 - 20646383
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||| |||| |||||||| || ||||||||||||| |||||||||||||||    
T  20646441 taaaaataatgtatttgataaaattagctgttgaagtggctgataagtataaaatgaca 20646383  T

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Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 20991804 - 20991867
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  20991804 tccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 20991867  T

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Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 25022450 - 25022513
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  25022450 tccctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 25022513  T

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Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 32561770 - 32561818
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    |||||||||||||||| || ||||||||||||| |||||||||||||||    
T  32561770 gtgtttggtaaaattagctgttgaagtggctgataagtataaaatgaca 32561818  T

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Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 21761679 - 21761739
Alignment:
Q  156 ctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    |||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  21761679 ctataaatattcaaacttttggtcttagtctccataaaaaaattcttcgacctttaatcct 21761739  T

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Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 21527597 - 21527539
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||| ||| |||||||||||||||||||||||||||| || | || ||||||||||||    
T  21527597 taaaattaaagtgtttggtaaaattaactattgaagtgactcataaatataaaatgaca 21527539  T

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Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32986286 - 32986340
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaat 55  Q
    ||||||||| ||||||||||||||||  | ||||||||||||| |||||||||||    
T  32986286 taaaaataacgtgtttggtaaaattagttgttgaagtggctgataagtataaaat 32986340  T

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Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 13868065 - 13868017
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||| ||||||||||  ||||||||||||||| |||||||||||||||    
T  13868065 gtgttaggtaaaattagatattgaagtggctgataagtataaaatgaca 13868017  T

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Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 32560496 - 32560460
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    |||||||||||||||||||||||||| ||||||||||    
T  32560496 tccctataaatattcaaacttttggttttagtctcca 32560460  T

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Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 32986437 - 32986476
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccat 190  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  32986437 ggtccctataaatattcaaacttttggttttagtatccat 32986476  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 13867865 - 13867829
Alignment:
Q  153 tccctataaatattcaaacttttggtcttagtctcca 189  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  13867865 tccctataaatatccaaacttttggttttagtctcca 13867829  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 32560650 - 32560602
Alignment:
Q  11 gtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||  | ||||||||||||| || ||||||||||||    
T  32560650 gtgtttggtaaaattagttgttgaagtggctgataaatataaaatgaca 32560602  T

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Target: scaffold0330 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 7767 - 7709
Alignment:
Q  1 taaaaataatgtgtttggtaaaattaactattgaagtggctgacaagtataaaatgaca 59  Q
    ||||||||||||||||||||||||||  | ||||||| ||||| |||||||||||||||    
T  7767 taaaaataatgtgtttggtaaaattagttgttgaagtagctgataagtataaaatgaca 7709  T

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Target: scaffold0330; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 7622 - 7557
Alignment:
Q  151 ggtccctataaatattcaaacttttggtcttagtctccatnnnnnnnttcttcgacttttaatcct 216  Q
    ||||||||||||||||||||||||||||||||||| ||||       ||||||||| |||||||||    
T  7622 ggtccctataaatattcaaacttttggtcttagtcgccataaaaaaattcttcgacctttaatcct 7557  T

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