View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21058_high_3 (Length: 389)
Name: NF21058_high_3
Description: NF21058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21058_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 5 - 360
Target Start/End: Original strand, 18420899 - 18421273
Alignment:
| Q |
5 |
agtgaaatgaagatgagatagaaatatgaaatttctttcattagtaatggaaatgagtgattttatttttcgactcatggcagtgagtgatga---atct |
101 |
Q |
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| T |
18420899 |
agtgaaatggagatgagatagaaatatgaaatttctttcattagtaatggaaatgagtgattttatttttcgactcatggcagtgagtgatgatgaatct |
18420998 |
T |
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| Q |
102 |
aatggatacttgtaaaaagatatctatgatggccaataacataattttaaaccaacatttccttaaaataaa----------------cataattctaaa |
185 |
Q |
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| T |
18420999 |
aatggatacttgtaaaaagatatctatgatggccaataacataattttaaactaacatttccttaaaaaaaaaaaaaaaaaaaaaaagcataattctaaa |
18421098 |
T |
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| Q |
186 |
ctaacattgaaagcatatatgaggacccataagcatcaagctatggtgatcccctgtttcaatggaactccttggcagtgctttaccttccccttgacaa |
285 |
Q |
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| T |
18421099 |
ctaacattgaaagcatatatgaggacacataagcaacaagttatggtgatccagtgtttcaatggaacaccttggcagtgctttaccttcctcttgacaa |
18421198 |
T |
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| Q |
286 |
ttccctcaaggtctcctcgatggtcgatctacgattctattacaaaattatgtcatgcttatatgaatgtaatat |
360 |
Q |
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| T |
18421199 |
ttccctcaaggtctcctcgatggtcgatctacgattctattacaaaattatgtcatgcttatatgaatgtaatat |
18421273 |
T |
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