View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21059_high_2 (Length: 361)

Name: NF21059_high_2
Description: NF21059
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21059_high_2
NF21059_high_2
[»] chr4 (15 HSPs)
chr4 (1-148)||(756785-756932)
chr4 (1-148)||(702270-702417)
chr4 (1-148)||(770569-770716)
chr4 (245-361)||(702046-702162)
chr4 (245-361)||(757023-757139)
chr4 (245-361)||(770345-770461)
chr4 (42-145)||(35055947-35056050)
chr4 (43-145)||(16038862-16038964)
chr4 (42-148)||(40145389-40145495)
chr4 (293-361)||(35055750-35055818)
chr4 (293-361)||(16038677-16038745)
chr4 (247-285)||(35055810-35055848)
chr4 (327-361)||(16039440-16039474)
chr4 (327-361)||(35060218-35060252)
chr4 (247-275)||(16038747-16038775)
[»] scaffold0031 (4 HSPs)
scaffold0031 (1-148)||(123720-123867)
scaffold0031 (245-361)||(128930-129046)
scaffold0031 (1-100)||(134591-134690)
scaffold0031 (245-329)||(125362-125446)
[»] chr7 (6 HSPs)
chr7 (24-148)||(26025515-26025639)
chr7 (245-361)||(26025300-26025416)
chr7 (245-361)||(21710131-21710246)
chr7 (42-145)||(21709930-21710033)
chr7 (75-148)||(33458697-33458770)
chr7 (1-37)||(21709441-21709477)
[»] chr1 (8 HSPs)
chr1 (245-361)||(51598375-51598491)
chr1 (42-148)||(51598586-51598692)
chr1 (42-145)||(16962762-16962865)
chr1 (42-144)||(2972094-2972196)
chr1 (42-145)||(40812239-40812342)
chr1 (293-361)||(16962985-16963053)
chr1 (247-285)||(16962955-16962993)
chr1 (1-37)||(51599162-51599198)
[»] chr8 (12 HSPs)
chr8 (245-361)||(39270357-39270473)
chr8 (42-145)||(39567669-39567772)
chr8 (42-145)||(45377724-45377827)
chr8 (44-145)||(8096185-8096286)
chr8 (70-145)||(39270189-39270264)
chr8 (293-361)||(39567474-39567542)
chr8 (293-361)||(45377526-45377594)
chr8 (65-145)||(13366123-13366203)
chr8 (307-361)||(44633499-44633553)
chr8 (247-285)||(39567534-39567572)
chr8 (247-285)||(45377586-45377624)
chr8 (327-361)||(45378305-45378339)
[»] chr6 (9 HSPs)
chr6 (42-145)||(21283306-21283413)
chr6 (293-361)||(21283543-21283611)
chr6 (42-145)||(14326525-14326628)
chr6 (42-145)||(14419535-14419638)
chr6 (307-359)||(21612607-21612659)
chr6 (60-145)||(16269375-16269460)
chr6 (245-285)||(21283511-21283551)
chr6 (307-359)||(21612475-21612527)
chr6 (307-361)||(5659918-5659972)
[»] chr3 (6 HSPs)
chr3 (44-145)||(12061021-12061122)
chr3 (42-145)||(23560767-23560870)
chr3 (42-144)||(48866564-48866667)
chr3 (76-148)||(48866644-48866717)
chr3 (313-357)||(36982928-36982972)
chr3 (313-357)||(37008367-37008411)
[»] chr2 (1 HSPs)
chr2 (42-145)||(14510155-14510258)
[»] scaffold0122 (1 HSPs)
scaffold0122 (55-139)||(16867-16951)


Alignment Details
Target: chr4 (Bit Score: 144; Significance: 1e-75; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 756785 - 756932
Alignment:
Q  1 tctaaacactttacttttttctctttttctccatcttgacccattttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaac 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  756785 tctaaacactttacttttttctctttttcttcatcttgacccattttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaac 756884  T
Q  101 ccatttttggatctaatctaaattcttccaaatcccaatctaaactca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  756885 ccatttttggatctaatctaaattcttccaaatcccaatctaaactca 756932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 702417 - 702270
Alignment:
Q  1 tctaaacactttacttttttctctttttctccatcttgacccattttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaac 100  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  702417 tctaaacactttatttttttctctttttcttcatcttgacccattttcgaatgccaatcattcatcatcaatagcaatcctttcaaattccaatctaaac 702318  T
Q  101 ccatttttggatctaatctaaattcttccaaatcccaatctaaactca 148  Q
     |||||||||||||||||||||||||||||||||| ||||||||||||    
T  702317 tcatttttggatctaatctaaattcttccaaatcctaatctaaactca 702270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 770716 - 770569
Alignment:
Q  1 tctaaacactttacttttttctctttttctccatcttgacccattttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaac 100  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  770716 tctaaacactttatttttttctctttttcttcatcttgacccattttcgaatgccaatcattcatcatcaatagcaatcctttcaaattccaatctaaac 770617  T
Q  101 ccatttttggatctaatctaaattcttccaaatcccaatctaaactca 148  Q
     |||||||||||||||||||||||||||||||||| ||||||||||||    
T  770616 tcatttttggatctaatctaaattcttccaaatcctaatctaaactca 770569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 245 - 361
Target Start/End: Complemental strand, 702162 - 702046
Alignment:
Q  245 ccacagattgaaccaaaaagaaggaaattttctgcagatttttatttttgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatca 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  702162 ccacagattgaaccaaaaagaaggaaattttctgcagatttttatttttgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatca 702063  T
Q  345 tatgaaatccaaatcta 361  Q
    |||||||||||||||||    
T  702062 tatgaaatccaaatcta 702046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 245 - 361
Target Start/End: Original strand, 757023 - 757139
Alignment:
Q  245 ccacagattgaaccaaaaagaaggaaattttctgcagatttttatttttgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatca 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  757023 ccacagattgaaccaaaaagaaggaaattttctgcagatttttatttttgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatca 757122  T
Q  345 tatgaaatccaaatcta 361  Q
    |||||||||||||||||    
T  757123 tatgaaatccaaatcta 757139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 245 - 361
Target Start/End: Complemental strand, 770461 - 770345
Alignment:
Q  245 ccacagattgaaccaaaaagaaggaaattttctgcagatttttatttttgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatca 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  770461 ccacagattgaaccaaaaagaaggaaattttctgcagatttttatttttgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatca 770362  T
Q  345 tatgaaatccaaatcta 361  Q
    |||||||||||||||||    
T  770361 tatgaaatccaaatcta 770345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 35056050 - 35055947
Alignment:
Q  42 cattttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatct 141  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  35056050 catttttgaatgtcaatcattcatcatcaatatcaatcctttcaaattctaatctaaacctatttttggatctaatctaaattcttccaaatcccaatct 35055951  T
Q  142 aaac 145  Q
    ||||    
T  35055950 aaac 35055947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 43 - 145
Target Start/End: Complemental strand, 16038964 - 16038862
Alignment:
Q  43 attttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatcta 142  Q
    ||||| ||||| |||||||||||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16038964 atttttgaatgccaatcattcatcgtcaatatcaatcctttcaaattcaaatctaaaccgatttttggatctaatctaaattcttccaaatcccaatcta 16038865  T
Q  143 aac 145  Q
    |||    
T  16038864 aac 16038862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 40145495 - 40145389
Alignment:
Q  42 cattttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatct 141  Q
    |||||||||||  ||||| ||||||||||  | |||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||| ||||| |    
T  40145495 cattttcgaattccaatccttcatcatcagcatcaatcctttcaaattccaatctaaacccatttatggatctaatttaaactcttccaaattccaattt 40145396  T
Q  142 aaactca 148  Q
    |||||||    
T  40145395 aaactca 40145389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 293 - 361
Target Start/End: Complemental strand, 35055818 - 35055750
Alignment:
Q  293 tgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatcatatgaaatccaaatcta 361  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  35055818 tgcagatttgaatgaacaacaaaactcatcagataaaattttacatttatcatatgaaatccaaatcta 35055750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 293 - 361
Target Start/End: Complemental strand, 16038745 - 16038677
Alignment:
Q  293 tgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatcatatgaaatccaaatcta 361  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||    
T  16038745 tgcagatttgaatgaacaacaaaactcatcagataaaactttacatttcttatatgaaatccaaatcta 16038677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 35055848 - 35055810
Alignment:
Q  247 acagattgaaccaaaaagaaggaaattttctgcagattt 285  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  35055848 acagattgaaccaaaaagaatgaaattttctgcagattt 35055810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 361
Target Start/End: Complemental strand, 16039474 - 16039440
Alignment:
Q  327 aaaactttacatttatcatatgaaatccaaatcta 361  Q
    |||||||||| ||||||||||||||||||||||||    
T  16039474 aaaactttacctttatcatatgaaatccaaatcta 16039440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 361
Target Start/End: Complemental strand, 35060252 - 35060218
Alignment:
Q  327 aaaactttacatttatcatatgaaatccaaatcta 361  Q
    |||||||||| ||||||||||||||||||||||||    
T  35060252 aaaactttacctttatcatatgaaatccaaatcta 35060218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 275
Target Start/End: Complemental strand, 16038775 - 16038747
Alignment:
Q  247 acagattgaaccaaaaagaaggaaatttt 275  Q
    |||||||||||||||||||||||||||||    
T  16038775 acagattgaaccaaaaagaaggaaatttt 16038747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 132; Significance: 2e-68; HSPs: 4)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 123720 - 123867
Alignment:
Q  1 tctaaacactttacttttttctctttttctccatcttgacccattttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaac 100  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  123720 tctaaacactttatttttttctctttttcttcatcttgacccattttcgaatgccaatcattcatcatcaatagcaatcctttcaaattccaatctaaac 123819  T
Q  101 ccatttttggatctaatctaaattcttccaaatcccaatctaaactca 148  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  123820 ccatttttgaatctaatctaaattcttccaaatcccaatctaaactca 123867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 245 - 361
Target Start/End: Original strand, 128930 - 129046
Alignment:
Q  245 ccacagattgaaccaaaaagaaggaaattttctgcagatttttatttttgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatca 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  128930 ccacagattgaaccaaaaagaaggaaattttctgcagatttttatttttgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatca 129029  T
Q  345 tatgaaatccaaatcta 361  Q
    |||||||||||||||||    
T  129030 tatgaaatccaaatcta 129046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 134591 - 134690
Alignment:
Q  1 tctaaacactttacttttttctctttttctccatcttgacccattttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaac 100  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  134591 tctaaacactttatttttttctctttttcttcatcttgacccattttcgaatgccaatcattcatcatcaatagcaatcctttcaaattccaatctaaac 134690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 245 - 329
Target Start/End: Original strand, 125362 - 125446
Alignment:
Q  245 ccacagattgaaccaaaaagaaggaaattttctgcagatttttatttttgcagatttgaatgaacaacaaaactcatcaaataaa 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  125362 ccacagattgaaccaaaaagaaggaaattttctgcagatttttatttttgcagatttgaatgaacaacaaaactcatcaaataaa 125446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 2e-59; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 24 - 148
Target Start/End: Complemental strand, 26025639 - 26025515
Alignment:
Q  24 tttttctccatcttgacccattttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaat 123  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26025639 tttttctccatctcgacccattttcgaatgccaatcattcatcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaat 26025540  T
Q  124 tcttccaaatcccaatctaaactca 148  Q
    |||||||||||||||||||||||||    
T  26025539 tcttccaaatcccaatctaaactca 26025515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 245 - 361
Target Start/End: Complemental strand, 26025416 - 26025300
Alignment:
Q  245 ccacagattgaaccaaaaagaaggaaattttctgcagatttttatttttgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatca 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26025416 ccacagattgaaccaaaaagaaggaaattttctgcagatttttatttttgtagatttaaatgaacaacaaaactcatcaaataaaactttacatttatca 26025317  T
Q  345 tatgaaatccaaatcta 361  Q
    |||||||||||||||||    
T  26025316 tatgaaatccaaatcta 26025300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 245 - 361
Target Start/End: Original strand, 21710131 - 21710246
Alignment:
Q  245 ccacagattgaaccaaaaagaaggaaattttctgcagatttttatttttgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatca 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  21710131 ccacagattgaaccaaaaagaaggaaattttctgcagatttttatttctgcagatttgaatgaacaacaaaacacatcaaa-aaaactttacatttatca 21710229  T
Q  345 tatgaaatccaaatcta 361  Q
    |||||||||||||||||    
T  21710230 tatgaaatccaaatcta 21710246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 21709930 - 21710033
Alignment:
Q  42 cattttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatct 141  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21709930 cattttcgaatgccaatcattcatcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatct 21710029  T
Q  142 aaac 145  Q
    ||||    
T  21710030 aaac 21710033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 33458697 - 33458770
Alignment:
Q  75 caatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatctaaactca 148  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||    
T  33458697 caattctttcaaattccaatctaaacccatttttggatctaatctaaactcttccaaattccaatttaaactca 33458770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 21709441 - 21709477
Alignment:
Q  1 tctaaacactttacttttttctctttttctccatctt 37  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  21709441 tctaaacactttatttttttctctttttcttcatctt 21709477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 9e-55; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 245 - 361
Target Start/End: Complemental strand, 51598491 - 51598375
Alignment:
Q  245 ccacagattgaaccaaaaagaaggaaattttctgcagatttttatttttgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatca 344  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51598491 ccacaaattgaaccaaaaagaaggaaattttctgcagatttttatttctgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatca 51598392  T
Q  345 tatgaaatccaaatcta 361  Q
    |||||||||||||||||    
T  51598391 tatgaaatccaaatcta 51598375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 51598692 - 51598586
Alignment:
Q  42 cattttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatct 141  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  51598692 cattttcgaatgccaatcattcatcatcaatagcaatcctttcaaattccaatctaaatccatttttggatctaatctaaattcttccaaatcccaatct 51598593  T
Q  142 aaactca 148  Q
    |||||||    
T  51598592 aaactca 51598586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 16962762 - 16962865
Alignment:
Q  42 cattttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatct 141  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16962762 catttttgaatgccaatcattcatcatcaatatcaatcctttcaaatttcaatctaaacccatttttggatctaatctaaattcttccaaatcccaatct 16962861  T
Q  142 aaac 145  Q
    ||||    
T  16962862 aaac 16962865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 2972094 - 2972196
Alignment:
Q  42 cattttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatct 141  Q
    |||||||||||  ||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||| ||||| |    
T  2972094 cattttcgaattccaatcattcatcatcaacatcaatcctttcaaagtccaatctaaacccatttttggatctaatctaaacccttccaaattccaatat 2972193  T
Q  142 aaa 144  Q
    |||    
T  2972194 aaa 2972196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 40812342 - 40812239
Alignment:
Q  42 cattttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatct 141  Q
    |||||||||||  ||||  ||||||||||| | ||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |    
T  40812342 cattttcgaattccaattcttcatcatcaacatcaatcctttcacattccaatctaaacctatttttggatctaatctaaatccttccaaatcccaattt 40812243  T
Q  142 aaac 145  Q
    ||||    
T  40812242 aaac 40812239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 293 - 361
Target Start/End: Original strand, 16962985 - 16963053
Alignment:
Q  293 tgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatcatatgaaatccaaatcta 361  Q
    ||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16962985 tgcagatttaagtgaacaacaaaactcatcagataaaactttacatttatcatatgaaatccaaatcta 16963053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 16962955 - 16962993
Alignment:
Q  247 acagattgaaccaaaaagaaggaaattttctgcagattt 285  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16962955 acagattgaaccaaaaagaaggaaattttctgcagattt 16962993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 51599198 - 51599162
Alignment:
Q  1 tctaaacactttacttttttctctttttctccatctt 37  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  51599198 tctaaacactttatttttttctctttttcttcatctt 51599162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 2e-52; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 245 - 361
Target Start/End: Original strand, 39270357 - 39270473
Alignment:
Q  245 ccacagattgaaccaaaaagaaggaaattttctgcagatttttatttttgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatca 344  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39270357 ccacagattgaaccaaaaagaaggaaattttctgcagatatttatttctgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatca 39270456  T
Q  345 tatgaaatccaaatcta 361  Q
    ||||||||| |||||||    
T  39270457 tatgaaatctaaatcta 39270473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 39567772 - 39567669
Alignment:
Q  42 cattttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatct 141  Q
    |||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39567772 catttttgaatgccaatcattcatcatcaatatcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatct 39567673  T
Q  142 aaac 145  Q
    ||||    
T  39567672 aaac 39567669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 45377827 - 45377724
Alignment:
Q  42 cattttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatct 141  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||     
T  45377827 cattttcgaatgccaatcattcatcatcaatatcaatcctttcaaattccaatctaaactcatttttggatctaatttaaattctttcaaatcccaatcc 45377728  T
Q  142 aaac 145  Q
    ||||    
T  45377727 aaac 45377724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 44 - 145
Target Start/End: Complemental strand, 8096286 - 8096185
Alignment:
Q  44 ttttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatctaa 143  Q
    |||||||||  ||||| ||||||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  8096286 ttttcgaattacaatccttcatcatcaacatcaatcctttcatattccaatctaaatccatttttggatctaatctaaactcttccaaatcccaatctaa 8096187  T
Q  144 ac 145  Q
    ||    
T  8096186 ac 8096185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 70 - 145
Target Start/End: Original strand, 39270189 - 39270264
Alignment:
Q  70 aatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatctaaac 145  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  39270189 aatagcaatcctttcaaattccaatctaaactcatttttgaatctaatctaaattcttccaaatcccaatctaaac 39270264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 361
Target Start/End: Complemental strand, 39567542 - 39567474
Alignment:
Q  293 tgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatcatatgaaatccaaatcta 361  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39567542 tgcagatttgaatgaacaacaaaactcatcagataaaactttacatttatcatatgaaatccaaatcta 39567474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 361
Target Start/End: Complemental strand, 45377594 - 45377526
Alignment:
Q  293 tgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatcatatgaaatccaaatcta 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45377594 tgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatcatttgaaatccaaatcta 45377526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 145
Target Start/End: Original strand, 13366123 - 13366203
Alignment:
Q  65 tcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatctaaac 145  Q
    ||||||| | ||||||||||| |||||||||||||| |||||||||||||||||||||  ||||||||| |||||||||||    
T  13366123 tcatcaacatcaatcctttcatattccaatctaaactcatttttggatctaatctaaacccttccaaattccaatctaaac 13366203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 307 - 361
Target Start/End: Complemental strand, 44633553 - 44633499
Alignment:
Q  307 aacaacaaaactcatcaaataaaactttacatttatcatatgaaatccaaatcta 361  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  44633553 aacaacaaaactcatcaaataaaattttacctttatcatatgaaatccaaatcta 44633499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 39567572 - 39567534
Alignment:
Q  247 acagattgaaccaaaaagaaggaaattttctgcagattt 285  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39567572 acagattgaaccaaaaagaaggaaattttctgcagattt 39567534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 45377624 - 45377586
Alignment:
Q  247 acagattgaaccaaaaagaaggaaattttctgcagattt 285  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  45377624 acagattgaaccaaaaagaaagaaattttctgcagattt 45377586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 361
Target Start/End: Complemental strand, 45378339 - 45378305
Alignment:
Q  327 aaaactttacatttatcatatgaaatccaaatcta 361  Q
    |||||||||| ||||||||||||||||||||||||    
T  45378339 aaaactttacctttatcatatgaaatccaaatcta 45378305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 3e-39; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 21283306 - 21283413
Alignment:
Q  42 cattttcgaatgtcaatcattcatcatcaatagcaat----cctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatccca 137  Q
    |||||||||||||||||||||||| ||||||||||||    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21283306 cattttcgaatgtcaatcattcattatcaatagcaatatatcctttcaaattccaatctaaacccaattttggatctaatctaaattcttccaaatccca 21283405  T
Q  138 atctaaac 145  Q
    ||||||||    
T  21283406 atctaaac 21283413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 293 - 361
Target Start/End: Original strand, 21283543 - 21283611
Alignment:
Q  293 tgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatcatatgaaatccaaatcta 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21283543 tgcagatttgaatgaacaacaaaactcatcaaataaaactttacatttatcatatgaaatccaaatcta 21283611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 14326525 - 14326628
Alignment:
Q  42 cattttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatct 141  Q
    |||||||||||  ||||| ||||||||||  |  |||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  14326525 cattttcgaattccaatccttcatcatcagcattaatcctttcatattccaatctaaacccatttttggatctaatctaaacacttccaaatcccaatct 14326624  T
Q  142 aaac 145  Q
    ||||    
T  14326625 aaac 14326628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 14419535 - 14419638
Alignment:
Q  42 cattttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatct 141  Q
    |||||||||||  ||||| ||||||||||  |  |||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  14419535 cattttcgaattccaatccttcatcatcagcattaatcctttcatattccaatctaaacccatttttggatctaatctaaacacttccaaatcccaatct 14419634  T
Q  142 aaac 145  Q
    ||||    
T  14419635 aaac 14419638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 21612659 - 21612607
Alignment:
Q  307 aacaacaaaactcatcaaataaaactttacatttatcatatgaaatccaaatc 359  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  21612659 aacaacaaaactcatcaaataaaattttacctttatcatatgaaatccaaatc 21612607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 60 - 145
Target Start/End: Complemental strand, 16269460 - 16269375
Alignment:
Q  60 attcatcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatctaaac 145  Q
    |||||||||| | | |||||||||||||||||||| |||||  |||||| |||||||||||||  ||| ||||| |||||||||||    
T  16269460 attcatcatctacatcaatcctttcaaattccaatataaacaaatttttagatctaatctaaacccttacaaattccaatctaaac 16269375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 285
Target Start/End: Original strand, 21283511 - 21283551
Alignment:
Q  245 ccacagattgaaccaaaaagaaggaaattttctgcagattt 285  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  21283511 ccacagattgaaccaaaaagaaggaaattttctgcagattt 21283551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 21612527 - 21612475
Alignment:
Q  307 aacaacaaaactcatcaaataaaactttacatttatcatatgaaatccaaatc 359  Q
    |||||||||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  21612527 aacaacaaaacttatcaaataaaattttacctttatcatatgaaatccaaatc 21612475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 307 - 361
Target Start/End: Complemental strand, 5659972 - 5659918
Alignment:
Q  307 aacaacaaaactcatcaaataaaactttacatttatcatatgaaatccaaatcta 361  Q
    ||||||||||||||||| |||| ||||||| ||||||||||||||||| ||||||    
T  5659972 aacaacaaaactcatcatataatactttacctttatcatatgaaatcctaatcta 5659918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 4e-29; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 44 - 145
Target Start/End: Original strand, 12061021 - 12061122
Alignment:
Q  44 ttttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatctaa 143  Q
    |||||||||  ||||| ||||||||||| | ||||||||||| |||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  12061021 ttttcgaattacaatccttcatcatcaacatcaatcctttcatattctaatctaaatccatttttggatctaatctaaactcttccaaatcccaatctaa 12061120  T
Q  144 ac 145  Q
    ||    
T  12061121 ac 12061122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 23560870 - 23560767
Alignment:
Q  42 cattttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatct 141  Q
    |||||||||||  |||||||||||||| | ||  |||||||||| ||||||||||||||||||||||||||||||||||||  ||| ||||| ||||||     
T  23560870 cattttcgaattccaatcattcatcattagtattaatcctttcatattccaatctaaacccatttttggatctaatctaaacactttcaaattccaatcc 23560771  T
Q  142 aaac 145  Q
    ||||    
T  23560770 aaac 23560767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 48866564 - 48866667
Alignment:
Q  42 cattttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatct-aaacccatttttggatctaatctaaattcttccaaatcccaatc 140  Q
    |||||||||||  ||||| ||||||||||| | ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||| |||||  |||||    
T  48866564 cattttcgaattccaatccttcatcatcaacatcaatcctttcaaatttcaatctaaaacccatttttggatctaatctaaatcctttcaaatttcaatc 48866663  T
Q  141 taaa 144  Q
    ||||    
T  48866664 taaa 48866667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 48866644 - 48866717
Alignment:
Q  76 aatcctttcaaattccaatctaaa-cccatttttggatctaatctaaattcttccaaatcccaatctaaactca 148  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||  |||||||||  |||| ||||||||    
T  48866644 aatcctttcaaatttcaatctaaaacccatttttggatctaatctaaacccttccaaatttcaatttaaactca 48866717  T

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Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 36982928 - 36982972
Alignment:
Q  313 aaaactcatcaaataaaactttacatttatcatatgaaatccaaa 357  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||||    
T  36982928 aaaactcatcaaataaaattttacctttatcatatgaaattcaaa 36982972  T

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Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 37008367 - 37008411
Alignment:
Q  313 aaaactcatcaaataaaactttacatttatcatatgaaatccaaa 357  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||||    
T  37008367 aaaactcatcaaataaaattttacctttatcatatgaaattcaaa 37008411  T

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Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 14510258 - 14510155
Alignment:
Q  42 cattttcgaatgtcaatcattcatcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaatct 141  Q
    ||||||| |||  ||||| |||| |||||| | ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||    
T  14510258 cattttcaaattccaatctttcaccatcaacatcaatcctttcatattccaatctaaactcatttttggatctaatctaaatccttccaactcccaatct 14510159  T
Q  142 aaac 145  Q
    ||||    
T  14510158 aaac 14510155  T

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Target: scaffold0122 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 16951 - 16867
Alignment:
Q  55 caatcattcatcatcaatagcaatcctttcaaattccaatctaaacccatttttggatctaatctaaattcttccaaatcccaat 139  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||  |||||||||||||||    
T  16951 caatccttcatcatcaatatcaatcctttcatattccaatctaaactcatttttggatgtaatctaaacccttccaaatcccaat 16867  T

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