View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2105_high_7 (Length: 211)
Name: NF2105_high_7
Description: NF2105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2105_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 30463582 - 30463683
Alignment:
| Q |
87 |
aatgggctagacaaactaataccataaaaaagacatatattaacttctaataatgatatttgtacatccttaatttttatatataactcaataacttgtt |
186 |
Q |
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| T |
30463582 |
aatgggcttgacaaactaataccatataaaacacatatattaacttctaataatgatatttgtacatctataatttttatatataactcaatatcttgtt |
30463681 |
T |
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| Q |
187 |
ct |
188 |
Q |
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|| |
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| T |
30463682 |
ct |
30463683 |
T |
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Target: chr1 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 35241010 - 35241043
Alignment:
| Q |
110 |
ataaaaaagacatatattaacttctaataatgat |
143 |
Q |
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|||||||||||||||||||||||| ||||||||| |
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| T |
35241010 |
ataaaaaagacatatattaacttcaaataatgat |
35241043 |
T |
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