View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21060_high_4 (Length: 345)
Name: NF21060_high_4
Description: NF21060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21060_high_4 |
 | |
|
| [»] scaffold0425 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 290; Significance: 1e-163; HSPs: 32)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 18 - 335
Target Start/End: Complemental strand, 5298969 - 5298652
Alignment:
| Q |
18 |
cttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttctt |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
5298969 |
cttactacttccttttaacaatggatctaccggaagtaagattattgtgaccacacgtgacaaggaggtagcatcagttatgaagtccaccaaacttctt |
5298870 |
T |
|
| Q |
118 |
catttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattg |
217 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5298869 |
catttgaagcaattgaagaagagtgaatgttggagtatgtttgtgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattg |
5298770 |
T |
|
| Q |
218 |
gcaagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagat |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5298769 |
gcaagaaaatcgtagaaaagtgtggagggttgcctctagctgtaaaagcattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagat |
5298670 |
T |
|
| Q |
318 |
attggagacagatctgtg |
335 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
5298669 |
attggagacagatctgtg |
5298652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 38 - 335
Target Start/End: Complemental strand, 5268274 - 5267977
Alignment:
| Q |
38 |
atggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaa |
137 |
Q |
| |
|
|||||||| | |||||||| |||||||||||||||||| ||| | |||||||| | |||||||| ||||||||| ||| |||| || || || || | |
|
|
| T |
5268274 |
atggatctgctggaagtaaaattattgtgacaacacgtaacatgaaggtagcaactgtcatgaactccaccaaaaaccttaatttagagaaactgaagga |
5268175 |
T |
|
| Q |
138 |
gagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtagaaaag |
237 |
Q |
| |
|
|||||||||||||||||||||| || |||| |||||||| || | |||||||||||||| |||||||||||||||||||| |||||||| ||||| ||| |
|
|
| T |
5268174 |
gagtgaatgttggagtatgtttgtgcgacatgcttttcatggaagcaatgcaagtgaatacccaaatcttgaatcaattggaaagaaaatagtagataag |
5268075 |
T |
|
| Q |
238 |
tgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagatattggagacagatctgtg |
335 |
Q |
| |
|
||||||||||| ||||||||| ||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |
|
|
| T |
5268074 |
tgtggagggttacctttagctgtaaaaactttgggaaatctcttgcgaagaaaattctctcaacatgaatgggttaagatattggagacagatatgtg |
5267977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 38 - 335
Target Start/End: Complemental strand, 5250387 - 5250090
Alignment:
| Q |
38 |
atggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaa |
137 |
Q |
| |
|
|||||||||| |||||||| |||||||| ||||||||| |||||||||| ||||| |||||||||||||||| ||| |||| || ||||| || | |
|
|
| T |
5250387 |
atggatctactggaagtaaaattattgttacaacacgtaacaaggaggtggcatctatcatgaagtccaccaaggagcttaatttagagaaattgaagga |
5250288 |
T |
|
| Q |
138 |
gagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtagaaaag |
237 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||||| |||| | ||||||||||||||||||||||||||||| ||||| |||||||| ||| ||| |
|
|
| T |
5250287 |
gagtgaatgttggagtatgtttgtgagacatgctttttacggaaggaatgcaagtgaatatccaaatcttgaatctattggtaagaaaattataggcaag |
5250188 |
T |
|
| Q |
238 |
tgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagatattggagacagatctgtg |
335 |
Q |
| |
|
|||||||||||||| |||||| ||||||| ||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
5250187 |
tgtggagggttgccattagctgtaaaaactttgggaaatctcttgcgaagaaagttttctcaacgtgattgggttaagatattggagacagatatgtg |
5250090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 49 - 335
Target Start/End: Original strand, 4388765 - 4389051
Alignment:
| Q |
49 |
ggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaagagtgaatgtt |
148 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||| ||| |||| || || || | | |||||||||| |
|
|
| T |
4388765 |
ggaagtaaaattattgtgacaactcgtgacaaggaggtagcatctatcatgaagtccaccaaggagcttaatttagagaaactgaatgaaagtgaatgtt |
4388864 |
T |
|
| Q |
149 |
ggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtagaaaagtgtggagggtt |
248 |
Q |
| |
|
|||| |||||| ||||||| ||||||||||| | ||||||||||| ||||||||||||| |||||||||||||||||| ||||| ||||||| |||||| |
|
|
| T |
4388865 |
ggagaatgtttgtgagacatgcttttcacggaaggaatgcaagtgagtatccaaatcttgtatcaattggcaagaaaattgtagataagtgtgtagggtt |
4388964 |
T |
|
| Q |
249 |
gcctttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagatattggagacagatctgtg |
335 |
Q |
| |
|
|| |||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||| |
|
|
| T |
4388965 |
tccattagctgtaaaaacgttgggaaatctcttgcgaagaaaattctctcaacgtgaatgggttaggatattggagaccgatatgtg |
4389051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 19 - 323
Target Start/End: Complemental strand, 5280918 - 5280614
Alignment:
| Q |
19 |
ttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttc |
118 |
Q |
| |
|
||||||||||| ||||| |||||||| |||||||||||||||||||| ||||||||||| ||||||||| |||| ||||| ||| || || | ||| |
|
|
| T |
5280918 |
ttactacttccctttaatcatggatcttttggaagtaagattattgtgaccacacgtgacaaagaggtagcagcagtaatgaaatcctcccaaatagttc |
5280819 |
T |
|
| Q |
119 |
atttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattgg |
218 |
Q |
| |
|
||||||||||||||||| | || || |||||| | | ||| ||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||| |
|
|
| T |
5280818 |
atttgaagcaattggaggaaagcgatggttggaatttatttgtgagacatgcttttcacggaaaaaatgcaagtgaatatccaaatcttgaatcaattgg |
5280719 |
T |
|
| Q |
219 |
caagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagata |
318 |
Q |
| |
|
|||||||| ||| | |||||||||||| |||||||||||| ||| |||| |||||||||||||||| ||||| |||| |||||||| |||||| |
|
|
| T |
5280718 |
gaagaaaattgtaaacaagtgtggagggccgcctttagctctgaaatcattagggaatctcttgcgaatgaaattttctcctggtgaatggaccaagata |
5280619 |
T |
|
| Q |
319 |
ttgga |
323 |
Q |
| |
|
||||| |
|
|
| T |
5280618 |
ttgga |
5280614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 19 - 335
Target Start/End: Original strand, 8568740 - 8569056
Alignment:
| Q |
19 |
ttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttc |
118 |
Q |
| |
|
||||||||||| ||||| |||||||| | ||||||||||||||||||||||||||||||||| | || |||| ||||||||| || | | |||| |
|
|
| T |
8568740 |
ttactacttccatttaatcatggatcttcaggaagtaagattattgtgacaacacgtgacaagcatgttgcattagtcatgaaatctgagcagcaacttc |
8568839 |
T |
|
| Q |
119 |
atttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattgg |
218 |
Q |
| |
|
|||| |||||||||||| ||| || ||||||||| | ||| ||| ||| |||||||| || | |||| ||||||||||||||||||||| ||||| |
|
|
| T |
8568840 |
atttaaagcaattggaggagaaagattgttggagtttatttgtgaaacatgcttttcaaggaaagaatgtgtttgaatatccaaatcttgaatcgattgg |
8568939 |
T |
|
| Q |
219 |
caagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagata |
318 |
Q |
| |
|
||||| || |||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||| |||||| |||||||| ||| ||| |
|
|
| T |
8568940 |
aaagaagattgtagaaaagtgtggagggttgcctttagctgtgaaaacattggggaatctcttgcaaagaaaattttctcaaggtgaatggtctaacata |
8569039 |
T |
|
| Q |
319 |
ttggagacagatctgtg |
335 |
Q |
| |
|
|||||||| ||| |||| |
|
|
| T |
8569040 |
ttggagactgatatgtg |
8569056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 39 - 335
Target Start/End: Complemental strand, 6882746 - 6882450
Alignment:
| Q |
39 |
tggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaag |
138 |
Q |
| |
|
||||||| | ||||||||||| ||||||||||||| ||||||||| ||||||||| |||||| |||||| || | || || |||||||||||| || |
|
|
| T |
6882746 |
tggatcttcaggaagtaagatgattgtgacaacacatgacaaggaagtagcatcaatcatgagatccacccggctaatacacttaaagcaattggaggag |
6882647 |
T |
|
| Q |
139 |
agtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtagaaaagt |
238 |
Q |
| |
|
||||| | ||||||| | ||| ||||| | |||||||| || | |||| | |||||||||||||||||||| || ||||||||||| |||||||||| |
|
|
| T |
6882646 |
agtgattcttggagtttatttgtgagatatgcttttcaaggtaggaatgtatttgaatatccaaatcttgaattgataggcaagaaaatagtagaaaagt |
6882547 |
T |
|
| Q |
239 |
gtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagatattggagacagatctgtg |
335 |
Q |
| |
|
|||| |||||||||||||| || |||||||||||||||||||||| || |||||||||| || ||||||| ||||| |||||||||| ||| |||| |
|
|
| T |
6882546 |
gtggggggttgcctttagcactgaaaacattggggaatctcttgctaaaaaaattctctgaatctgaatggattaaggtattggagactgatttgtg |
6882450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 19 - 335
Target Start/End: Complemental strand, 6265953 - 6265637
Alignment:
| Q |
19 |
ttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttc |
118 |
Q |
| |
|
|||||||||||| ||||| ||||||| | || ||||||| || |||||||||| ||||| |||||||| | ||| |||| ||||| ||| |||| |
|
|
| T |
6265953 |
ttactacttcctcttaaccgtggatcttctcgaggtaagatgatcgtgacaacacatgacagtgaggtagcgttagttatgagatccacacgactacttc |
6265854 |
T |
|
| Q |
119 |
atttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattgg |
218 |
Q |
| |
|
|||| |||||||||||| ||||||| | ||||||| | ||| ||||| | |||||||| |||| |||| |||||||||||||||||||| ||||| |
|
|
| T |
6265853 |
atttaaagcaattggaggagagtgactcttggagtttatttgtgagatatgcttttcaaggcaagaatgtgtttgaatatccaaatcttgaattgattgg |
6265754 |
T |
|
| Q |
219 |
caagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagata |
318 |
Q |
| |
|
||||||||| |||| ||| ||||| |||||||||||| |||| ||||||||||||| |||||| | ||||||||||||| | |||||||||| ||||| |
|
|
| T |
6265753 |
caagaaaatagtagcaaaatgtggggggttgcctttaactctgaaaacattggggattctcttccaaagaaaattctctgtaactgaatgggttgagata |
6265654 |
T |
|
| Q |
319 |
ttggagacagatctgtg |
335 |
Q |
| |
|
|||||||| ||| |||| |
|
|
| T |
6265653 |
ttggagactgatttgtg |
6265637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 19 - 310
Target Start/End: Original strand, 6838693 - 6838984
Alignment:
| Q |
19 |
ttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttc |
118 |
Q |
| |
|
|||||||||||||||||| | |||||| | ||||||||||||||||||||||| || || | ||||||||| | |||| || || || | || |
|
|
| T |
6838693 |
ttactacttccttttaaccaaggatcttctacgagtaagattattgtgacaacacgcgataaaaatgtagcatcaattgtgaaatctacaaagttatttg |
6838792 |
T |
|
| Q |
119 |
atttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattgg |
218 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||| | ||| | || ||||||||||||| ||||||||| ||||| ||||| |||||||||||||| |
|
|
| T |
6838793 |
atttgaaacaattggagaagagtgacagttggagtttattttccacacttgcttttcacggcaaaaatgcaagcgaatacccaaaacttgaatcaattgg |
6838892 |
T |
|
| Q |
219 |
caagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatggg |
310 |
Q |
| |
|
||| || || ||||| |||||||||||||||||||||||| | |||||||||||||| |||||||| | |||||||||| ||| |||||||| |
|
|
| T |
6838893 |
caaaaagattgtagataagtgtggagggttgcctttagctgtgaaaacattggggaacctcttgcggaaaaaattctctaaacatgaatggg |
6838984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 49 - 335
Target Start/End: Complemental strand, 6142518 - 6142232
Alignment:
| Q |
49 |
ggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaagagtgaatgtt |
148 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||| ||||||||| ||||| ||| | | ||||||||||||||||||||| ||||| | | || |
|
|
| T |
6142518 |
ggaagtaagatgattgtgacaacacatgacaaggaagtagcatcaagcatgagttccgctcggatacttcatttgaagcaattggaggagagtaactctt |
6142419 |
T |
|
| Q |
149 |
ggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtagaaaagtgtggagggtt |
248 |
Q |
| |
|
||||| | ||| ||||| | ||||||| || | |||| || ||||||||||||||||| || ||||||||||| |||||||||||||| ||||| |
|
|
| T |
6142418 |
ggagtttatttgtgagatatgcttttccaggtaggaatgtgtttggatatccaaatcttgaattgataggcaagaaaatagtagaaaagtgtggggggtt |
6142319 |
T |
|
| Q |
249 |
gcctttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagatattggagacagatctgtg |
335 |
Q |
| |
|
||| |||||||| ||||||||||||| ||||||| |||||||||||| || ||||||||||| |||||||||||| ||| |||| |
|
|
| T |
6142318 |
gccattagctctgaaaacattggggattctcttgaatagaaaattctctgaaattgaatgggttaggatattggagactgatttgtg |
6142232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 64 - 335
Target Start/End: Complemental strand, 6169108 - 6168837
Alignment:
| Q |
64 |
gtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaagagtgaatgttggagtatgtttatga |
163 |
Q |
| |
|
|||||||||| ||| || || || ||||||||||||| |||||| | | |||||||| | |||||||||| ||||||| | ||||||| | ||| | | |
|
|
| T |
6169108 |
gtgacaacacatgataaagaagttgcatcagtcatgagatccacccagatacttcatttaaggcaattggaggagagtgactcttggagtttatttgtaa |
6169009 |
T |
|
| Q |
164 |
gacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtagaaaagtgtggagggttgcctttagctctaaa |
263 |
Q |
| |
|
|||| |||||| | |||| ||| ||||||||||||||||||||| ||||| | |||||| |||||||| ||||| |||| |||||| |||||||| |
|
|
| T |
6169008 |
gacatgcttttgaaggcaggaatatgtttgaatatccaaatcttgaatcgattggtatgaaaatagtagaaaaatgtggggggtcgccttttgctctaaa |
6168909 |
T |
|
| Q |
264 |
aacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagatattggagacagatctgtg |
335 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||||| || |||||||||||||||||| ||||| ||| |||| |
|
|
| T |
6168908 |
aacattggggattctcttgcaaagaagattctctgaaaatgaatgggttaagatattagagactgatttgtg |
6168837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 192 - 335
Target Start/End: Complemental strand, 6259288 - 6259145
Alignment:
| Q |
192 |
tgaatatccaaatcttgaatcaattggcaagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaa |
291 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||| |||||||| ||||| |||||||||| |||||| ||||||||||||| |||||||| |||||| |
|
|
| T |
6259288 |
tgaatatccaaatcttgaatcgatcggcaagaaaatagtagaaaaatgtggggggttgccttcagctctgaaaacattggggattctcttgcaaagaaag |
6259189 |
T |
|
| Q |
292 |
ttctctcaacgtgaatgggttaagatattggagacagatctgtg |
335 |
Q |
| |
|
|||||| || |||||||||||||||||||||||| ||| |||| |
|
|
| T |
6259188 |
ttctctgaaaatgaatgggttaagatattggagactgatttgtg |
6259145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 19 - 326
Target Start/End: Complemental strand, 8589966 - 8589656
Alignment:
| Q |
19 |
ttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcat--ca-gtcatgaagtccaccaaacttc |
115 |
Q |
| |
|
||||||||||| |||||| |||||| | | |||||||||||| | |||||||||||||| ||||||||||||| || || | || |||||||| | |
|
|
| T |
8589966 |
ttactacttccctttaaccatggattttctggaagtaagattgtcgtgacaacacgtgaaaaggaggtagcatatcatgttcttaaatccaccaagttat |
8589867 |
T |
|
| Q |
116 |
ttcatttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaat |
215 |
Q |
| |
|
|| |||| | |||||||| || || || ||||||||| | ||| ||| ||| |||||||| || | |||| |||||||||||||||||||||||| |
|
|
| T |
8589866 |
ttgatttacaacaattggacaaaagcgattgttggagtttatttgtgacacatgcttttcaaggaaagaatgtgtgtgaatatccaaatcttgaatcaac |
8589767 |
T |
|
| Q |
216 |
tggcaagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaag |
315 |
Q |
| |
|
|||||||||||| | || |||||||||||||||||||||||| ||||| || |||| | |||||||||||||| || ||||||| ||| ||| ||||| |
|
|
| T |
8589766 |
tggcaagaaaatactggataagtgtggagggttgcctttagctgtaaaatcaatgggccaactcttgcgaagaaatttttctcaacatgagtggattaag |
8589667 |
T |
|
| Q |
316 |
atattggagac |
326 |
Q |
| |
|
||||||||||| |
|
|
| T |
8589666 |
atattggagac |
8589656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 64 - 335
Target Start/End: Complemental strand, 6245504 - 6245233
Alignment:
| Q |
64 |
gtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaagagtgaatgttggagtatgtttatga |
163 |
Q |
| |
|
|||||||||| ||| || || || ||||||||||||| | |||| | | |||||||| | |||||||||| ||||||| | ||||||| | ||| | | |
|
|
| T |
6245504 |
gtgacaacacatgataaagaagttgcatcagtcatgagatacacccagatacttcatttaaggcaattggaggagagtgactcttggagtttatttgtaa |
6245405 |
T |
|
| Q |
164 |
gacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtagaaaagtgtggagggttgcctttagctctaaa |
263 |
Q |
| |
|
|||| |||||| | |||| ||| ||||||||||||||||||||| ||||| | |||||| |||||||| ||||| |||| |||||||||||| || |
|
|
| T |
6245404 |
gacatgcttttgaaggcaggaatatgtttgaatatccaaatcttgaatcgattggtatgaaaatagtagaaaaatgtggggggtcgcctttagctctgaa |
6245305 |
T |
|
| Q |
264 |
aacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagatattggagacagatctgtg |
335 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||||| || |||||||||||||||||| ||||| ||| |||| |
|
|
| T |
6245304 |
aacattggggattctcttgcaaagaagattctctgaaaatgaatgggttaagatattagagactgatttgtg |
6245233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 53 - 335
Target Start/End: Original strand, 13270357 - 13270639
Alignment:
| Q |
53 |
gtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaagagtgaatgttggag |
152 |
Q |
| |
|
|||||||||| ||||| |||| ||| || || |||||||||||||||| |||| | | ||||||| | |||||||||| ||||||| | |||||| |
|
|
| T |
13270357 |
gtaagattatcgtgacgacacatgataatgaagtagcatcagtcatgagatccaaccggataattcatttaaggcaattggaggagagtgactcttggag |
13270456 |
T |
|
| Q |
153 |
tatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtagaaaagtgtggagggttgcct |
252 |
Q |
| |
|
| | ||| ||||||| |||||| | |||| ||| ||||||||||||||||||||| || || | || ||| |||||||| ||||| || |||||| |
|
|
| T |
13270457 |
tttatttgtgagacatgcttttgaaggcaggaatatgtttgaatatccaaatcttgaatccatcggtatgagaatagtagaaaaatgtgggggtttgcct |
13270556 |
T |
|
| Q |
253 |
ttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagatattggagacagatctgtg |
335 |
Q |
| |
|
|||||||| ||||||||||||| |||||||| ||||||||||||| || | |||||||||||||||||||||| ||| |||| |
|
|
| T |
13270557 |
ttagctctgaaaacattggggattctcttgcaaagaaaattctctgaaattaaatgggttaagatattggagactgatttgtg |
13270639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 53 - 326
Target Start/End: Complemental strand, 6900316 - 6900043
Alignment:
| Q |
53 |
gtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaagagtgaatgttggag |
152 |
Q |
| |
|
||||||| ||||||||||||| ||| | ||| ||||||||| |||| | || || |||| |||||||| || |||||| || ||||||| |||||||| |
|
|
| T |
6900316 |
gtaagatgattgtgacaacacatgatatggaagtagcatcaatcataagatctacgcaactacttcatttaaaacaattgaaggagagtgattgttggag |
6900217 |
T |
|
| Q |
153 |
tatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtagaaaagtgtggagggttgcct |
252 |
Q |
| |
|
| | ||| ||| ||| || |||| || | ||| | | ||||||||||||||| |||| || ||||| |||| ||| ||||||||| |||||||||| |
|
|
| T |
6900216 |
tttatttgtgaaacatgcctttctaggaagaaaagtatttgaatatccaaatctggaattgataggcaaacaaatagtacaaaagtgtgaagggttgcct |
6900117 |
T |
|
| Q |
253 |
ttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagatattggagac |
326 |
Q |
| |
|
|||||||| ||||||||||||||||||||| |||||| |||||| ||| ||| ||||||||||| |||||||| |
|
|
| T |
6900116 |
ttagctctgaaaacattggggaatctcttggaaagaaagttctctgaacctgattgggttaagatgttggagac |
6900043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 318
Target Start/End: Complemental strand, 8471798 - 8471499
Alignment:
| Q |
19 |
ttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttc |
118 |
Q |
| |
|
||||||||||| |||||| |||||||| | ||||||||||||||||||||||| ||||| |||||||||| | | |||| || || || | || |
|
|
| T |
8471798 |
ttactacttccctttaaccatggatcttctacgagtaagattattgtgacaacacgcgacaaagaggtagcattaattgtgaaatctacaaagttatttg |
8471699 |
T |
|
| Q |
119 |
atttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattgg |
218 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||| | ||| || | ||||||| |||| ||| || ||||| |||||||||||||||||||| |
|
|
| T |
8471698 |
atttgaaacaattggagaagagtgactgttggagtttattttccagtcttgcttttcctggcaaaaaattgagcgaatacccaaatcttgaatcaattgg |
8471599 |
T |
|
| Q |
219 |
caagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagata |
318 |
Q |
| |
|
||| || || ||||| |||||||||||| ||||||||||| | ||||||||||| || || ||||| | ||||| ||||||| ||||||| ||||||| |
|
|
| T |
8471598 |
caaaaatattgtagataagtgtggagggctgcctttagctgtgaaaacattgggaaaccttttgcggaaaaaatattctcaacacgaatgggataagata |
8471499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 20 - 335
Target Start/End: Complemental strand, 6736226 - 6735908
Alignment:
| Q |
20 |
tactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatg-----aagtccaccaaactt |
114 |
Q |
| |
|
|||||||||| |||||| |||||||| | |||||||| ||||| |||||||||||||| ||||||||||||| |||||| || || ||| || | |
|
|
| T |
6736226 |
tactacttccgtttaaccatggatcttctggaagtaaaattatcgtgacaacacgtgaaaaggaggtagcat--gtcatgttctaaaatcaaccgaatta |
6736129 |
T |
|
| Q |
115 |
cttcatttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaa |
214 |
Q |
| |
|
|| |||| | |||||||| || || | |||||||| | ||| ||| ||| || ||||| || | || || |||||||||||||||||||||||| |
|
|
| T |
6736128 |
tttgatttacaacaattggaaaaaagcaattgttggagattatttgtgacacatgcgtttcaaggaaaaagtgtttgtgaatatccaaatcttgaatcaa |
6736029 |
T |
|
| Q |
215 |
ttggcaagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaa |
314 |
Q |
| |
|
|||| |||||||| || || |||||||||||||||||| ||||| ||||| ||||||| | || ||||| | |||| | ||| ||| ||||||| |||| |
|
|
| T |
6736028 |
ttgggaagaaaatagtggagaagtgtggagggttgcctctagctataaaatcattgggccaacttttgcgtaaaaaactttctgaacatgaatggattaa |
6735929 |
T |
|
| Q |
315 |
gatattggagacagatctgtg |
335 |
Q |
| |
|
|||||||||||| ||| |||| |
|
|
| T |
6735928 |
gatattggagactgatatgtg |
6735908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 335
Target Start/End: Original strand, 6721861 - 6722177
Alignment:
| Q |
19 |
ttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttc |
118 |
Q |
| |
|
|||||||||| |||||| ||||||| | ||||||||||| || ||||||||||| |||||||| ||||||||| |||||| |||||| || |||| |
|
|
| T |
6721861 |
ttactacttctttttaaatgtggatcttcaggaagtaagatgatcgtgacaacacgggacaaggaagtagcatcaatcatgagatccacccggctacttc |
6721960 |
T |
|
| Q |
119 |
atttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattgg |
218 |
Q |
| |
|
|||| | ||||||||| | ||||| | |||||| || ||| ||| || ||||||| |||| ||| ||| | |||||||||||| || || |
|
|
| T |
6721961 |
atttatatcaattggaggaaagtgactcttggaggatatttgtgaatcatgcttttcgaggcaggaatttgtttgattttccaaatcttgagtcggttat |
6722060 |
T |
|
| Q |
219 |
caagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagata |
318 |
Q |
| |
|
||||||| | | |||||||||||||||||||||||||||||| ||||||||||| ||||| ||| ||| | ||| ||| ||| |||||||| | ||||| |
|
|
| T |
6722061 |
caagaaagtggcagaaaagtgtggagggttgcctttagctctgaaaacattgggtaatcttttgagaatacgattttctaaacttgaatgggatcagata |
6722160 |
T |
|
| Q |
319 |
ttggagacagatctgtg |
335 |
Q |
| |
|
|||||||| ||| |||| |
|
|
| T |
6722161 |
ttggagactgatttgtg |
6722177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 207 - 335
Target Start/End: Complemental strand, 7587921 - 7587793
Alignment:
| Q |
207 |
tgaatcaattggcaagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaa |
306 |
Q |
| |
|
|||||| ||||||||||| || ||||| || ||||||||||||||| ||||| | |||||||||||||| ||| ||| ||||||||| |||||| |||| |
|
|
| T |
7587921 |
tgaatcgattggcaagaagattgtagagaaatgtggagggttgcctctagctgtgaaaacattggggaaactcctgcaaagaaaattttctcaagctgaa |
7587822 |
T |
|
| Q |
307 |
tgggttaagatattggagacagatctgtg |
335 |
Q |
| |
|
||| |||||||||||||||||||| |||| |
|
|
| T |
7587821 |
tggtttaagatattggagacagatatgtg |
7587793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 20 - 335
Target Start/End: Original strand, 6591124 - 6591439
Alignment:
| Q |
20 |
tactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttca |
119 |
Q |
| |
|
|||||||||| |||| | |||||||| | ||||||||||| || |||||||| | ||||||||| ||||||||| ||||| |||||| | || || | |
|
|
| T |
6591124 |
tactacttccgtttagccatggatcttctggaagtaagatgatggtgacaacgcatgacaaggaagtagcatcaatcatgggatccacccagctagttga |
6591223 |
T |
|
| Q |
120 |
tttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggc |
219 |
Q |
| |
|
||| || ||||||||| ||||||| | ||||||| | ||| ||||| | ||||||| || | ||| ||||||||||| ||||| || || ||| |
|
|
| T |
6591224 |
tttaaatcaattggaggagagtgactcttggagtttatttgtgagatatgcttttcgaggtagggatgtgtttgaatatccaactcttgtattgataggc |
6591323 |
T |
|
| Q |
220 |
aagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagatat |
319 |
Q |
| |
|
|||||||| |||||||||||||| ||| | |||||||||||||||||| ||||| | || |||| || |||||||||| | |||||| | ||||||| |
|
|
| T |
6591324 |
aagaaaatagtagaaaagtgtggggggattcctttagctctaaaaacaatggggcaacttttgcaaaaaaaattctctgtaaccgaatggatgaagatat |
6591423 |
T |
|
| Q |
320 |
tggagacagatctgtg |
335 |
Q |
| |
|
||||||| ||| |||| |
|
|
| T |
6591424 |
tggagactgatatgtg |
6591439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 65 - 335
Target Start/End: Complemental strand, 6917317 - 6917047
Alignment:
| Q |
65 |
tgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaagagtgaatgttggagtatgtttatgag |
164 |
Q |
| |
|
|||||||| ||||||||| ||||||||| |||||| |||||| || ||| |||| |||||||| || |||||| ||| ||||| | ||| |||| |
|
|
| T |
6917317 |
tgacaacatatgacaaggaagtagcatcaatcatgagatccacccggctacttgatttaaagcaattagaagagagtggttgtaggagtttatttgtgag |
6917218 |
T |
|
| Q |
165 |
acacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaa |
264 |
Q |
| |
|
|| |||||||| | | ||||| ||| || |||||||||||||| |||||||||||||| ||||| || |||||||||||||||||| || | | | |
|
|
| T |
6917217 |
tcatgcttttcatgataggaatgcgagtcaacatccaaatcttgaaattattggcaagaaaatagtagacaaatgtggagggttgcctttaactgtgaca |
6917118 |
T |
|
| Q |
265 |
acattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagatattggagacagatctgtg |
335 |
Q |
| |
|
| |||| ||||||||||| |||| ||||||| ||||||| |||||||||||| ||||||| ||| |||| |
|
|
| T |
6917117 |
gaaatgggtaatctcttgcgtagaagattctctaaacgtgagtgggttaagataatggagactgatttgtg |
6917047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 271
Target Start/End: Original strand, 6554231 - 6554485
Alignment:
| Q |
20 |
tactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatg-----aagtccaccaaactt |
114 |
Q |
| |
|
|||||||||| |||||| |||||||| | ||||||| |||||| |||||||||||||| ||||||||||||| |||||| || || |||||| | |
|
|
| T |
6554231 |
tactacttccgtttaaccatggatcttctggaagtatgattatcgtgacaacacgtgaaaaggaggtagcat--gtcatgttctaaaatcaaccaaatta |
6554328 |
T |
|
| Q |
115 |
cttcatttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaa |
214 |
Q |
| |
|
|| |||| | |||||||| || || | |||||||| | ||| ||| ||| |||||||| || | || || |||||||||||||||||||| ||| |
|
|
| T |
6554329 |
tttgatttacaacaattggaaaaaagcaattgttggagattatttgtgacacatgcttttcaaggaaaaagtgtgtgtgaatatccaaatcttgaaacaa |
6554428 |
T |
|
| Q |
215 |
ttggcaagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaaacattgg |
271 |
Q |
| |
|
|||| | |||||| || || |||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
6554429 |
ttgggaggaaaatagtggacaagtgtggagggttgcctttagctataaaatcattgg |
6554485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 335
Target Start/End: Complemental strand, 7750088 - 7749945
Alignment:
| Q |
192 |
tgaatatccaaatcttgaatcaattggcaagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaa |
291 |
Q |
| |
|
||||||||||||||| || || || ||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||| | | |||| || ||| |
|
|
| T |
7750088 |
tgaatatccaaatctcgagtcgatcggcaagaaaatagtagaaaagtgtggggggttgcctttagctctagaaacattggggcaattattgcaaaacaaa |
7749989 |
T |
|
| Q |
292 |
ttctctcaacgtgaatgggttaagatattggagacagatctgtg |
335 |
Q |
| |
|
|||| | || ||||||| |||| ||||||||||| ||| |||| |
|
|
| T |
7749988 |
ttctgtgaaactgaatggattaaaatattggagactgatatgtg |
7749945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 335
Target Start/End: Original strand, 6519954 - 6520273
Alignment:
| Q |
19 |
ttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagca--tca-gtcatgaagtccaccaaacttc |
115 |
Q |
| |
|
||||||||||| ||||| |||||||| | |||||||||||||| |||||||||||||| ||| |||||||| ||| ||| |||| |||||| | | |
|
|
| T |
6519954 |
ttactacttccgcttaaccatggatcttctggaagtaagattatcgtgacaacacgtgaaaagaaggtagcagatcatgtcctgaactccaccgagttaa |
6520053 |
T |
|
| Q |
116 |
ttcatttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaat |
215 |
Q |
| |
|
||||||| | |||||||| || || | ||||||||| | ||| || ||| |||||||| |||| || |||| |||||||| |||||| | || |
|
|
| T |
6520054 |
ttcatttacatcaattggacaaaagcaattgttggagtttatttgagacacatgcttttcaaggcatgcgtgtgtgtgactatccaaaacttgaaacgat |
6520153 |
T |
|
| Q |
216 |
tggcaagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaag |
315 |
Q |
| |
|
||||| |||||| || || |||||||| ||||||||||||||| ||||| ||||||| | || ||||||| ||| || |||||| ||||||| | || |
|
|
| T |
6520154 |
tggcatgaaaatagtggacaagtgtggtgggttgcctttagctataaaatcattgggccaacttttgcgaaaaaagttttctcaagatgaatggatggag |
6520253 |
T |
|
| Q |
316 |
atattggagacagatctgtg |
335 |
Q |
| |
|
||||||||||| ||| |||| |
|
|
| T |
6520254 |
atattggagactgatatgtg |
6520273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 192 - 335
Target Start/End: Complemental strand, 8454715 - 8454572
Alignment:
| Q |
192 |
tgaatatccaaatcttgaatcaattggcaagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaa |
291 |
Q |
| |
|
|||||||||||||||||||||| |||| | ||||| || ||||||||||||||||||||||||||| ||||| ||||||| | || |||| | || | |
|
|
| T |
8454715 |
tgaatatccaaatcttgaatcagttggtagaaaaatagtggaaaagtgtggagggttgcctttagctataaaatcattgggccaacttctgcggaaaaca |
8454616 |
T |
|
| Q |
292 |
ttctctcaacgtgaatgggttaagatattggagacagatctgtg |
335 |
Q |
| |
|
|| ||| ||| ||||||| |||| ||||||||||| ||| |||| |
|
|
| T |
8454615 |
ttttctgaacatgaatggattaatatattggagactgatatgtg |
8454572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 335
Target Start/End: Original strand, 6448575 - 6448898
Alignment:
| Q |
20 |
tactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagc--atca-gtc-----atgaagtccaccaaa |
111 |
Q |
| |
|
|||| ||||| |||||| |||||||| | ||||||||||||||||||||||||||||| ||||||||||| |||| ||| ||||| |||||||| |
|
|
| T |
6448575 |
tactgcttccgtttaaccatggatcttctggaagtaagattattgtgacaacacgtgaaaaggaggtagcatatcatgtcctgaaatgaaatccaccaag |
6448674 |
T |
|
| Q |
112 |
cttcttcatttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaat |
211 |
Q |
| |
|
| || |||| | |||||||| || || | ||||||||| ||||| ||| ||| |||||||| || | | || |||||||||||| |||||||| |
|
|
| T |
6448675 |
ttatttgatttacaccaattggacaaaagcaattgttggagtttgtttttgacacatgcttttcatggaaagagtgtgtgtgaatatccaattcttgaat |
6448774 |
T |
|
| Q |
212 |
caattggcaagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggt |
311 |
Q |
| |
|
||||||| | |||||| | | | |||||||||||||||||||||| ||||| || |||| | | ||||| | ||| || |||||| ||||||| | |
|
|
| T |
6448775 |
caattggtaggaaaatattgaacatgtgtggagggttgcctttagctataaaatcactgggccaacatttgcggaaaaagttttctcaagatgaatggat |
6448874 |
T |
|
| Q |
312 |
taagatattggagacagatctgtg |
335 |
Q |
| |
|
|||||||||||||| ||| |||| |
|
|
| T |
6448875 |
gaagatattggagactgatatgtg |
6448898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 197 - 335
Target Start/End: Complemental strand, 6947325 - 6947187
Alignment:
| Q |
197 |
atccaaatcttgaatcaattggcaagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaattctc |
296 |
Q |
| |
|
||||||| |||||||||||||| | |||||| || || |||||||||||||||||||||||| ||||| || |||| | || ||||||| ||| || || |
|
|
| T |
6947325 |
atccaaaacttgaatcaattgggaggaaaatagtggacaagtgtggagggttgcctttagctataaaatcactgggccaacttttgcgaaaaaagttttc |
6947226 |
T |
|
| Q |
297 |
tcaacgtgaatgggttaagatattggagacagatctgtg |
335 |
Q |
| |
|
|||| ||||||| | ||||||||||||| ||| |||| |
|
|
| T |
6947225 |
tcaagatgaatggatgcagatattggagactgatatgtg |
6947187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 335
Target Start/End: Original strand, 6479949 - 6480093
Alignment:
| Q |
191 |
gtgaatatccaaatcttgaatcaattggcaagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaa |
290 |
Q |
| |
|
|||| |||||||| |||||||||||||||| |||||| | || ||||||| |||||||||||||||| ||| | ||||||| | || ||||| | ||| |
|
|
| T |
6479949 |
gtgactatccaaaacttgaatcaattggcaggaaaataatggacaagtgtgaagggttgcctttagctataatatcattgggccaacttttgcggaaaaa |
6480048 |
T |
|
| Q |
291 |
attctctcaacgtgaatgggttaagatattggagacagatctgtg |
335 |
Q |
| |
|
|| |||||| ||||||| | |||||||||||||| ||| |||| |
|
|
| T |
6480049 |
gttttctcaagatgaatggatgaagatattggagactgatatgtg |
6480093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 6479774 - 6479846
Alignment:
| Q |
19 |
ttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcat |
91 |
Q |
| |
|
||||||||||| |||||| |||||||| |||||||||||||| |||||||||||||| |||||||| |||| |
|
|
| T |
6479774 |
ttactacttccatttaaccatggatcttttggaagtaagattatcgtgacaacacgtgaaaaggaggtggcat |
6479846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 6947506 - 6947434
Alignment:
| Q |
19 |
ttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcat |
91 |
Q |
| |
|
||||| ||||| |||||| |||||||| | |||||||||||||| |||||||| ||||| ||||||| ||||| |
|
|
| T |
6947506 |
ttacttcttccctttaaccatggatcttctggaagtaagattatcgtgacaactcgtgaaaaggaggcagcat |
6947434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 8454891 - 8454824
Alignment:
| Q |
19 |
ttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggt |
86 |
Q |
| |
|
||||||||||| |||||| |||||||| |||||||||||| | |||||||||||||| |||||||| |
|
|
| T |
8454891 |
ttactacttccctttaaccatggatcttttggaagtaagattgtcgtgacaacacgtgagaaggaggt |
8454824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 137 - 323
Target Start/End: Original strand, 25242067 - 25242256
Alignment:
| Q |
137 |
agagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatc---gtaga |
233 |
Q |
| |
|
||||||| ||||||||| ||||| ||| || ||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
25242067 |
agagtgattgttggagtgtgtttgagaggcatgcttttcacggaaggaatgcaagtgaatatccaaatcttgcatcaattggcaagaaaataatagtaga |
25242166 |
T |
|
| Q |
234 |
aaagtgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagatattgga |
323 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
25242167 |
aaagtgtggagcgttgcctttagctgtaaaaacaacggggaatctcttgcgaagaaaattctctcaacatgaatgggttaagatattgga |
25242256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 326
Target Start/End: Original strand, 7270 - 7579
Alignment:
| Q |
20 |
tactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatg-----aagtccaccaaactt |
114 |
Q |
| |
|
|||||||||| |||||| |||||||| | |||||||| ||||| |||||||||||||| ||||||||||||| |||||| || || |||||| | |
|
|
| T |
7270 |
tactacttccgtttaaccatggatcttctggaagtaaaattatcgtgacaacacgtgaaaaggaggtagcat--gtcatgttctaaaatcaaccaaatta |
7367 |
T |
|
| Q |
115 |
cttcatttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaa |
214 |
Q |
| |
|
|| |||| | |||||||| || || | |||||||| | ||| ||| ||| |||||||| || | || || |||||||||||||||||||| ||| |
|
|
| T |
7368 |
tttgatttacaacaattggaaaaaagcaattgttggagattatttgtgacacatgcttttcaaggaaaaagtgtgtgtgaatatccaaatcttgaaacaa |
7467 |
T |
|
| Q |
215 |
ttggcaagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaa |
314 |
Q |
| |
|
|||| |||||||| || || |||||||||||||||||||||||| ||||| |||||| | || |||| |||||||| ||| ||| ||||||| |||| |
|
|
| T |
7468 |
ttgggaagaaaatagtggacaagtgtggagggttgcctttagctataaaatcattggcacaacttctgcgtagaaaattttctgaacatgaatggattaa |
7567 |
T |
|
| Q |
315 |
gatattggagac |
326 |
Q |
| |
|
|||||||||||| |
|
|
| T |
7568 |
gatattggagac |
7579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 323
Target Start/End: Original strand, 6573090 - 6573394
Alignment:
| Q |
19 |
ttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttc |
118 |
Q |
| |
|
||||||||| |||| ||| |||||| | ||||| |||||||||||||||||||||||||| | || |||| |||||||| || | | | |||| |
|
|
| T |
6573090 |
ttactactttctttcaaccatggatttttaggaagcaagattattgtgacaacacgtgacaaaaacgttgcattggtcatgaaatctgaccatcaacttc |
6573189 |
T |
|
| Q |
119 |
atttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattgg |
218 |
Q |
| |
|
||| ||| | |||||| ||| || ||||||||| | ||| ||| ||| ||||||| || | ||||| ||| ||||||||||||||||| ||||| |
|
|
| T |
6573190 |
ttttaaagaatttggaggagaaagattgttggagtttatttgtgaaacatgcttttcgaggaaaaaatgtgtttgactatccaaatcttgaatcgattgg |
6573289 |
T |
|
| Q |
219 |
caagaaaatcgtagaaaagtgtggagggttgcctttagctctaaaaacattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagata |
318 |
Q |
| |
|
|||| | || ||||| || |||||||||||||||||||| | |||||||||||||||||||||| ||||||||| ||||| |||||||| |||||||| |
|
|
| T |
6573290 |
caaggagattgtagacaaatgtggagggttgcctttagccgtgaaaacattggggaatctcttgcaaagaaaattttctcagggtgaatggtttaagata |
6573389 |
T |
|
| Q |
319 |
ttgga |
323 |
Q |
| |
|
||||| |
|
|
| T |
6573390 |
ttgga |
6573394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 326
Target Start/End: Original strand, 35140303 - 35140443
Alignment:
| Q |
192 |
tgaatatccaaatcttgaatcaattggcaagaaaatcgtagaaaagtgtggag------ggttgcctttagctctaaaaacattggggaatctcttgcga |
285 |
Q |
| |
|
||||||||||||||||||| | ||||| | |||| | |||||||| ||||| | |||| |||||||||| |||||| |||||| |||||||| | |
|
|
| T |
35140303 |
tgaatatccaaatcttgaaacgattggtatgaaactagtagaaaaatgtggggtgggggggttatctttagctctgaaaacactggggattctcttgcaa |
35140402 |
T |
|
| Q |
286 |
agaaaattctctcaacgtgaatgggttaagatattggagac |
326 |
Q |
| |
|
||||||||||| || |||||||||||||||||||||||| |
|
|
| T |
35140403 |
agaaaattctccgaaaatgaatgggttaagatattggagac |
35140443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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