View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21060_low_6 (Length: 250)
Name: NF21060_low_6
Description: NF21060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21060_low_6 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 13 - 250
Target Start/End: Original strand, 36134826 - 36135063
Alignment:
| Q |
13 |
tgaatattgttagcgatttctaatatcaatgcaaaattttccaattcaatatgtgtatttgtgtactttgtgattgagatgagccagtagcaagaatgaa |
112 |
Q |
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| T |
36134826 |
tgaatattgttagcgatttctaatatcaatgtaaaattttcaaattcaatatgtgtatttgtgtactttgtgattgagatgagccagtagcaagaatgaa |
36134925 |
T |
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| Q |
113 |
gaatgtttgatgatgtagcttgttttgaacaatggaatgtgttaatccattatatattcacnnnnnnngggctatattgtcaaaaatgttctcttgctcg |
212 |
Q |
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| T |
36134926 |
gaatgtttgatgatgtagcttgttttgaacaatggaatgtgttaatccattatatattcactttttttgggctatattgtcaaaaatgttctcttgctcg |
36135025 |
T |
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| Q |
213 |
aacaaatttctagatgaactgcttagaaataccttact |
250 |
Q |
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| T |
36135026 |
aacaaatttctagatgaactgcttagaaataccttact |
36135063 |
T |
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