View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21063_low_23 (Length: 266)
Name: NF21063_low_23
Description: NF21063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21063_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 72 - 251
Target Start/End: Original strand, 40587118 - 40587293
Alignment:
| Q |
72 |
ccagagtttgaaacaaagataatgtatctttgttcatgtcataacaacacaaacctggctcataaaaaggtgatggnnnnnnnnnnnnnnnnnncatcac |
171 |
Q |
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| T |
40587118 |
ccagattttgaaacaaagataatgtatctttgttcatgtcataacaacacaaacctggctcataaaaaggtgatggaaaaaaaaaaaaaa----catcac |
40587213 |
T |
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| Q |
172 |
tatactagtaagaaagaaagcatttaacaaactggtcaaccataacaataaataacacaagtgtactaagtacagaaact |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40587214 |
tatactagtaagaaagaaagcatttaacaaactggtcaaccataacaataaataacacaagtgtactaagtacagaaact |
40587293 |
T |
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