View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21063_low_25 (Length: 250)
Name: NF21063_low_25
Description: NF21063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21063_low_25 |
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Alignment Details
Target: chr5 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 30 - 234
Target Start/End: Original strand, 15134126 - 15134328
Alignment:
| Q |
30 |
aacaaaccactttcctccgacctccacttccaagaacccgattcatgtgaaccagcaaattcgtctaaggcctcgccgtcaaatcattaagtaacctcac |
129 |
Q |
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| T |
15134126 |
aacaaaccactttcttccggcctccaattccaagaacccgattcatgtgaacaagcaaatccgtctaaggcctc--cgtcaaatcattaagtaacctcac |
15134223 |
T |
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| Q |
130 |
ctcccacacaaaaagaggtctatgccaagatggaacaaaattcccaaatccattggtcaatatgcacatatattacatatataattataaactttttgct |
229 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |
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| T |
15134224 |
ctcccacacaaaaagaggtctatgccaagatggaacaaaattcccaaatccattggtcaatatccacatatattacatatataattataaactctttgct |
15134323 |
T |
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| Q |
230 |
atatg |
234 |
Q |
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||||| |
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| T |
15134324 |
atatg |
15134328 |
T |
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