View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21065_low_9 (Length: 290)
Name: NF21065_low_9
Description: NF21065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21065_low_9 |
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Alignment Details
Target: chr6 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 31353401 - 31353127
Alignment:
| Q |
1 |
actgcaaccatgaccgcaattaaaatcttagacctaaattacaaatttggatctgctacattcaagacaacatacattcacacaatcaatgaatctgaac |
100 |
Q |
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| T |
31353401 |
actgcaaccatgaccgcaattaaaatcttagacctaaattacaaatttggatctactacattcaagacaacatacattcacacaatcaatgaatctgaac |
31353302 |
T |
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| Q |
101 |
cattggtttcattcataactccacatcatctcttcctgagttcccaattgatgaatctaagagataaaatttattgactgtcttagaattttgggtcgag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31353301 |
cattggtttcattcataactccacatcatctcttcctgagttcccaattgatgaatctaagagataaaatttattgactgtcttagaattttgggtcgag |
31353202 |
T |
|
| Q |
201 |
cctaacccaatgtcacaaaacgacttgtaatgtgggaaatgtttctcacttataaacacgtttttcagaccatat |
275 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31353201 |
cctaacccaatgtcacaaaacgacttgtaatgtgggaaatgtttctcacttataaacacgtttttcagaccatat |
31353127 |
T |
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