View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21067_low_4 (Length: 294)
Name: NF21067_low_4
Description: NF21067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21067_low_4 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 162; Significance: 2e-86; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 29 - 284
Target Start/End: Complemental strand, 12888735 - 12888485
Alignment:
| Q |
29 |
tgtttttggtgaagtttcgaatggaagtgatgcagggagcggtgctgctgtccaaggtgatgtccaagtggtggtgatgcagtctgcgtgtggtgatctc |
128 |
Q |
| |
|
|||||||||||||||||| |||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12888735 |
tgtttttggtgaagtttcaaatggaggtgatgcagggagtggtgttgctgtcttaggtgatgtccaagtggtggtgatgcagtctgcgtgtggtgatctc |
12888636 |
T |
 |
| Q |
129 |
agatctaaggtcatggttaattgagttgatggtgattttgatggttgttggtgatgggtattacaattggtggtttttggtgttgagttgggaggcgaaa |
228 |
Q |
| |
|
| |||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
12888635 |
aaatctaaggtcatggtttattgagttgatggtaattttggtggttgttggtgatgggtatcacaggtggtggttgttggtgttgagttgggaggcgaa- |
12888537 |
T |
 |
| Q |
229 |
tgttcactgtctctttcttgtgtggtggtgagttcaggggtgtggcgatgatgatg |
284 |
Q |
| |
|
||| |||||||||||||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
12888536 |
-gtttactgtctctttcttgtgt-gtggtgagttca--agtgtggcgatgatgatg |
12888485 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 46879476 - 46879612
Alignment:
| Q |
148 |
attgagttgatggtgattttgatggttgttggtgatgggtattacaat-tggtggtttttggtgttgagttgggaggcgaaatgttcactgtctctttct |
246 |
Q |
| |
|
|||||||| ||||||||||| || ||||| ||||||||||| ||| |||||||| |||||||||||||||||| | ||| | | ||| ||||||| |
|
|
| T |
46879476 |
attgagttaatggtgattttagtgattgtttgtgatgggtatctcaagatggtggttgttggtgttgagttgggagttggaat-ataattgtgtctttct |
46879574 |
T |
 |
| Q |
247 |
tgtgtggtggtgag-ttcaggggtgtggcgatgatgat |
283 |
Q |
| |
|
|| |||||| |||| || ||||||| |||||||||||| |
|
|
| T |
46879575 |
tgagtggtgttgagttttaggggtgaggcgatgatgat |
46879612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 27 - 284
Target Start/End: Complemental strand, 49359048 - 49358794
Alignment:
| Q |
27 |
gttgtttttggtgaagtttcgaatggaagtgatgcagggagcggtgctgctgtccaaggtgatgtccaagtggtggtgatgcagtctgcgtgtggtgatc |
126 |
Q |
| |
|
||||||||||||||||||||||||| | |||||| ||||| ||| | ||||| |||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
49359048 |
gttgtttttggtgaagtttcgaatgaaggtgatgtagggaatggtcttcctgtcttgggtgatgtccaagtggtg---atgcagtttgcgtgtggtgata |
49358952 |
T |
 |
| Q |
127 |
tcagatctaaggtcatggttaattgagttgatggtgattttgatggttgttggtgatgggtattacaattggtggtttttggtgttgagttgggaggcga |
226 |
Q |
| |
|
||||||||||||| |||||| ||| |||| |||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||| ||| |||||| |
|
|
| T |
49358951 |
tcagatctaaggttatggtttattaagttcatggtgattttggtggttgttggtgatgggtatcacaagtggtggtttttggtgttgaggtggaaggcga |
49358852 |
T |
 |
| Q |
227 |
aatgttcactgtctctttcttgtgtggtggtgagttcaggggtgtggcgatgatgatg |
284 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
49358851 |
aatgttcactgtctctttcttgtgtggcggtgagttcaggggtgtggcgatgatgatg |
49358794 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 149; Significance: 1e-78; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 29 - 280
Target Start/End: Complemental strand, 22697031 - 22696786
Alignment:
| Q |
29 |
tgtttttggtgaagtttcgaatggaagtgatgcagggagcggtgctgctgtccaaggtgatgtccaagtggtggtgatgcagtctgcgtgtggtgatctc |
128 |
Q |
| |
|
||||||||||||||||| ||||||| |||||| ||||||| ||| ||||||| |||||||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
22697031 |
tgtttttggtgaagttttgaatggaggtgatgtagggagcagtgttgctgtcttgggtgatgtccaagtggcggtgatgcagtctacgtgtggtgatctc |
22696932 |
T |
 |
| Q |
129 |
agatctaaggtcatggttaattgagttgatggtgattttgatggttgttggtgatgggtattacaattggtggtttttggtgttgagttgggaggcgaaa |
228 |
Q |
| |
|
|||||||||||||||| | ||||||||||||| ||||||||||||||||| ||||| |||| |||||||| |||||||| || |||||||||||| |
|
|
| T |
22696931 |
agatctaaggtcatggattattgagttgatgg------tgatggttgttggtgatcggtatcacaagtggtggttgttggtgtttagctgggaggcgaaa |
22696838 |
T |
 |
| Q |
229 |
tgttcactgtctctttcttgtgtggtggtgagttcaggggtgtggcgatgat |
280 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
22696837 |
tgttcactgtctctttcttgtgtggtggtgagtttgggggtgtggcgatgat |
22696786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 31 - 184
Target Start/End: Original strand, 34501274 - 34501420
Alignment:
| Q |
31 |
tttttggtgaagtttcgaatggaagtgatgcagggagcggtgctgctgtccaaggtgatgtccaagtggtggtgatgcagtctgcgtgtggtgatctcag |
130 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||||| |||| ||||||| ||||||||||||||||| ||||||||||||||||||||| | |
|
|
| T |
34501274 |
tttttggtgaagtttcgaatggaggtgatgttgggagtggtgttgctgtcttgggtgatgtccaagtggtagtgatgcagtctgcgtgtggt-------g |
34501366 |
T |
 |
| Q |
131 |
atctaaggtcatggttaattgagttgatggtgattttgatggttgttggtgatg |
184 |
Q |
| |
|
|| |||||||||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
34501367 |
atataaggtcatggtatattgagttgatggtgattttagtggttgttggtgatg |
34501420 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 284
Target Start/End: Original strand, 34502703 - 34502810
Alignment:
| Q |
175 |
gttggtgatgggtattacaattggtggtttttggtgttgagttgggaggcgaaatgttcactgtctctttcttgtgtggtggtgagttcaggggtgtggc |
274 |
Q |
| |
|
|||||| ||| |||| |||| |||||||| ||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
34502703 |
gttggtaatgagtatcacaagtggtggttgttgctgttgagttgggaggcgaa--gtttactgtctctttcttctgtggtggtgagtttgagggtgtgga |
34502800 |
T |
 |
| Q |
275 |
gatgatgatg |
284 |
Q |
| |
|
|||||||||| |
|
|
| T |
34502801 |
gatgatgatg |
34502810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 140; Significance: 2e-73; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 31 - 283
Target Start/End: Complemental strand, 36934728 - 36934480
Alignment:
| Q |
31 |
tttttggtgaagtttcgaatggaagtgatgcagggagcggtgctgctgtccaaggtgatgtccaagtggtggtgatgcagtctgcgtgtggtgatct-ca |
129 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||| ||||||||| || ||||||||||||||||||||||||||| ||| |||||||||||| || |
|
|
| T |
36934728 |
tttttggtgaagtttcgaagggaggtgatgcagggagtggtgctgctatcttgggtgatgtccaagtggtggtgatgcagcctgagtgtggtgatcttca |
36934629 |
T |
 |
| Q |
130 |
gatctaaggtcatggttaattgagttgatggtgattttgatggttgttggtgatgggtattacaattggtggtttttggtgttgagttgggaggcgaaat |
229 |
Q |
| |
|
|||| |||||||||||| |||| |||||||| |||||| |||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
36934628 |
gatcgaaggtcatggtttattg--ttgatggtaattttggtggttgttggtgatgggtatcacaagtggtggtgtttggtgttgagttgggaggcgaaat |
36934531 |
T |
 |
| Q |
230 |
gttcactgtctctttcttgtgtggtggtgagttcaggggtgtggcgatgatgat |
283 |
Q |
| |
|
||||||||||| |||| ||||||||||||||| | ||||||||||||||||| |
|
|
| T |
36934530 |
attcactgtctc-ttct--tgtggtggtgagttcggaggtgtggcgatgatgat |
36934480 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 148 - 263
Target Start/End: Original strand, 5892657 - 5892772
Alignment:
| Q |
148 |
attgagttgatggtgattttgatggttgttggtgatgggtattacaattggtggtttttggtgttgagttgggaggcgaaatgttcactgtctctttctt |
247 |
Q |
| |
|
||||||||||||||||||||| || | ||| ||||||||||| |||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
5892657 |
attgagttgatggtgattttggtgttcgttagtgatgggtatcacaagtggtggtgtttggtgttaagttgggaggcgaaatgttcactgtctctttctt |
5892756 |
T |
 |
| Q |
248 |
gtgtggtggtgagttc |
263 |
Q |
| |
|
||||||| |||||||| |
|
|
| T |
5892757 |
gtgtggttgtgagttc |
5892772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 5888814 - 5888932
Alignment:
| Q |
29 |
tgtttttggtgaagtttcgaatggaagtgatgcagggagcggtgctgctgtccaaggtgatgtccaagtggtggtgatgcagtctgcgtgtggtgatc-t |
127 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||| ||| |||| |||| || |||||||||||||||||||||||| ||||||| |||||||||| | |
|
|
| T |
5888814 |
tgtttttggtgaagtttcgaatggaggtgctgcatagagtggtgttgctatcttgggtgatgtccaagtggtggtgatgtagtctgcatgtggtgatctt |
5888913 |
T |
 |
| Q |
128 |
cagatctaaggtcatggtt |
146 |
Q |
| |
|
|| |||||||||| ||||| |
|
|
| T |
5888914 |
catatctaaggtcgtggtt |
5888932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 131; Significance: 5e-68; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 29 - 284
Target Start/End: Complemental strand, 20519489 - 20519239
Alignment:
| Q |
29 |
tgtttttggtgaagtttcgaatggaagtgatgcagggagcggtgctgctgtccaaggtgatgtccaagtggtggtgatgcagtctgcgtgtggtgatctc |
128 |
Q |
| |
|
||||||||||||||||| ||||||| |||||| |||||| ||| |||||| |||||||||||||||||||||||| ||||||||| | |||||||| |
|
|
| T |
20519489 |
tgtttttggtgaagttttgaatggaggtgatgtagggagtagtgttgctgttttaggtgatgtccaagtggtggtgattgagtctgcgttttgtgatctc |
20519390 |
T |
 |
| Q |
129 |
agatctaaggtcatggttaattgagttgatggtgattttgatggttgttggtgatgggtattacaattggtggtttttggtgttgagttgggaggcgaaa |
228 |
Q |
| |
|
||||||||| |||||||| |||| |||||||| ||||||| |||||||||||||||||||| | || |||||| ||||||||||||||||||||||| |
|
|
| T |
20519389 |
agatctaagatcatggttgattgtgttgatggagattttggtggttgttggtgatgggtatcataagtggtgg---ttggtgttgagttgggaggcgaa- |
20519294 |
T |
 |
| Q |
229 |
tgttcactgtctctttcttgtgtggtggtgagttcaggggtgtggcgatgatgatg |
284 |
Q |
| |
|
||| | |||||||||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
20519293 |
-gtttattgtctctttcttgtgtggtggtgagttcgggggtatggcgatgatgatg |
20519239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 29 - 284
Target Start/End: Original strand, 38149097 - 38149348
Alignment:
| Q |
29 |
tgtttttggtgaagtttcgaatggaagtgatgcagggagcggtgctgctgtccaaggtgatgtccaagtggtggtgatgcagtctgcgtgtggtgatctc |
128 |
Q |
| |
|
||||||| ||||||||| ||||||| ||||||||||||| |||||| |||| | |||||| |||||||||||||||||||| || |||||||||| |
|
|
| T |
38149097 |
tgttttttgtgaagttttgaatggaggtgatgcagggagtggtgcttctgttttggatgatgtgacagtggtggtgatgcagtctgtgtttggtgatctc |
38149196 |
T |
 |
| Q |
129 |
agatctaaggtcatggttaattgagttgatggtgattttgatggttgttggtgatgggtattacaattggtggtttttggtgttgagttgggaggcgaaa |
228 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||||| ||||||||||||||| |||| |||| |||||| ||||||||||||||||||||||| |
|
|
| T |
38149197 |
agatctaaggtcatggtttattgagttgatggttattttggtggttgttggtgatgagtatcacaagtggtgg---ttggtgttgagttgggaggcgaa- |
38149292 |
T |
 |
| Q |
229 |
tgttcactgtctctttcttgtgtggtggtgagttc-aggggtgtggcgatgatgatg |
284 |
Q |
| |
|
||| | |||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
38149293 |
-gtttattgtctctttcttgtgtggtggtgagttcggggggtgtggcgatgatgatg |
38149348 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 29 - 284
Target Start/End: Original strand, 32919093 - 32919341
Alignment:
| Q |
29 |
tgtttttggtgaagtttcgaatggaagtgatgcagggagcggtgctgctgtccaaggtgatgtccaagtggtggtgatgcagtctgcgtgtggtgatctc |
128 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||| |||| | ||||||||| | |||||| |||||||||||||||||||||| || |||||||||| |
|
|
| T |
32919093 |
tgttttttgtgaagtttcgaatggaggtgatgcaaggagtg-tgctgctgttttggatgatgttcaagtggtggtgatgcagtctgtgtttggtgatctc |
32919191 |
T |
 |
| Q |
129 |
agatctaaggtcatggttaattgagttgatggtgattttgatggttgttggtgatgggtattacaattggtggtttttggtgttgagttgggaggcgaaa |
228 |
Q |
| |
|
| |||||||||||| || |||||||||||||| | |||| |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||| |
|
|
| T |
32919192 |
atatctaaggtcataatttattgagttgatggtta-tttggtggttgttggtgatgggtatcacaagtggtgg---ttggtgttgagttgggaggcgaa- |
32919286 |
T |
 |
| Q |
229 |
tgttcactgtctctttcttgtgtggtggtgagttcaggggtgtggcgatgatgatg |
284 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
32919287 |
-gttcactatctctttcttgtgtggtggtgagttcgtgggtgtggcaatgatgatg |
32919341 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 29 - 284
Target Start/End: Complemental strand, 36593389 - 36593140
Alignment:
| Q |
29 |
tgtttttggtgaagtttcgaatggaagtgatgcagggagcggtgctgctgtccaaggtgatgtccaagtggtggtgatgcagtctgcgtgtggtgatctc |
128 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||| |||| |||||| | |||||||||||||||||||||| |||||| || |||||||||| |
|
|
| T |
36593389 |
tgttttttgtgaagtttcgaatggaggtgatgcagggagtggtgttgctgttttggatgatgtccaagtggtggtgatgtagtctgtgtttggtgatctc |
36593290 |
T |
 |
| Q |
129 |
agatctaaggtcatggttaattgagttgatggtgattttgatggttgttggtgatgggtattacaattggtggtttttggtgttgagttgggaggcgaaa |
228 |
Q |
| |
|
|||||||||||||||| | |||||||||||||| |||||| |||||||| ||||||||||| |||| |||||| ||||||||||||||||||||||| |
|
|
| T |
36593289 |
agatctaaggtcatggattattgagttgatggttattttggtggttgtttgtgatgggtatcacaagtggtgg---ttggtgttgagttgggaggcgaa- |
36593194 |
T |
 |
| Q |
229 |
tgttcactgtctctttcttgtgtggtggtgagttcaggggtgtggcgatgatgatg |
284 |
Q |
| |
|
||| ||||||||||||||||| ||||| |||||| |||||| ||||||||||||| |
|
|
| T |
36593193 |
-gtttactgtctctttcttgtg-ggtggggagttcgggggtggggcgatgatgatg |
36593140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 181
Target Start/End: Original strand, 27631827 - 27631977
Alignment:
| Q |
31 |
tttttggtgaagtttcgaatggaagtgatgcagggagcggtgctgctgtccaaggtgatgtccaagtggtggtgatgcagtctgcgtgtggtgatctcag |
130 |
Q |
| |
|
|||||||||| |||| ||||||| ||| ||||||||| |||| ||| || ||||||||||| ||||||||||| ||||||| |||||||||||||| |
|
|
| T |
27631827 |
tttttggtgatgttttgaatggaggtggtgcagggagtggtgatgccatcttgggtgatgtccacatggtggtgatgtagtctgcatgtggtgatctcag |
27631926 |
T |
 |
| Q |
131 |
atctaaggtcatggttaattgagttgatggtgattttgatggttgttggtg |
181 |
Q |
| |
|
||||||||| ||| || ||||||||||||||||||||| |||||||||||| |
|
|
| T |
27631927 |
atctaaggtaatgatttattgagttgatggtgattttggtggttgttggtg |
27631977 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 161 - 284
Target Start/End: Original strand, 36607593 - 36607717
Alignment:
| Q |
161 |
tgattttgatggttgttggtgatgggtattacaattggtggt-ttttggtgttgagttgggaggcgaaatgttcactgtctctttcttgtgtggtggtga |
259 |
Q |
| |
|
|||||||| |||||||| ||||||||||| || | ||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| | |||| |
|
|
| T |
36607593 |
tgattttggtggttgttagtgatgggtatcacgagtggtggtgttttggtgttgagttgggaggcgaaatgttcaatgtctctttctcgtgtgatagtga |
36607692 |
T |
 |
| Q |
260 |
gttcaggggtgtggcgatgatgatg |
284 |
Q |
| |
|
|||| ||||||||| |||||||||| |
|
|
| T |
36607693 |
gttcgggggtgtggtgatgatgatg |
36607717 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 27631962 - 27632018
Alignment:
| Q |
195 |
ttggtggtttttggtgttgagttgggaggcgaaatgttcactgtctctttcttgtgt |
251 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
27631962 |
ttggtggttgttggtgttgagttgggaggcgaaatgttcattgtctctttcttgtgt |
27632018 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 36607544 - 36607590
Alignment:
| Q |
101 |
ggtgatgcagtctgcgtgtggtgatc-tcagatctaaggtcatggtt |
146 |
Q |
| |
|
||||||||||||| |||||||||||| ||| |||||||||||||||| |
|
|
| T |
36607544 |
ggtgatgcagtctacgtgtggtgatcttcaaatctaaggtcatggtt |
36607590 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 138 - 283
Target Start/End: Original strand, 32946613 - 32946756
Alignment:
| Q |
138 |
gtcatggttaattgagttgatggtgattttgatggttgttggtgatgggtattacaattggtggtttttggtgttgagttgggaggcgaaatgttcactg |
237 |
Q |
| |
|
||||||||| |||||||| ||||| |||||| |||||||||||||| |||| |||| |||||||| ||| |||||| |||||||||||||||||||| | |
|
|
| T |
32946613 |
gtcatggtttattgagttaatggtaattttggtggttgttggtgatatgtatcacaagtggtggttgttgatgttgatttgggaggcgaaatgttcaccg |
32946712 |
T |
 |
| Q |
238 |
tctctttcttgtgtggtggtgagttcaggggtgtggcgatgatgat |
283 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| || |||||| |
|
|
| T |
32946713 |
--tctttcttgtgtggtggtgagttcgtgggtgtggtgacgatgat |
32946756 |
T |
 |
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