View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21068_low_11 (Length: 324)
Name: NF21068_low_11
Description: NF21068
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21068_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 9 - 306
Target Start/End: Original strand, 43537486 - 43537800
Alignment:
| Q |
9 |
agcagagacaggagacaggattgcttgagaagaaaatcgcgggattatatgaaaatggaatggatatataacaatcatgtggagcaaaactctatataaa |
108 |
Q |
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| T |
43537486 |
agcagaaacaggagacagtattgcttgagaagaaaatcgcgggattatatgaaaatggaatggatctataacaatcatgtggagcaaaactctatataaa |
43537585 |
T |
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| Q |
109 |
ggccagttaagagattagagctttatggatacaactaccaaaatacccttctagttgggtcc--------aatatatataattatgttatgttgtggttt |
200 |
Q |
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| T |
43537586 |
ggccagttaagaggttagagctttatggatacaactaccaaaatacccttctagttgggtcctatatatatatatatataattatgttatgttgtggttt |
43537685 |
T |
|
| Q |
201 |
tgtctactcatataattgagcacgtctttgtgataagtactgaacttgcgacatgaaagatgtaatta---------catgtatgataattgaccttcca |
291 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
43537686 |
tgtctactcatataattgagcacgtctttgtgataagtactgaacttgcgacatgaaagatgtaattacatgtatatcatgtatgataattgaccttcca |
43537785 |
T |
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| Q |
292 |
tcaatgcatgcttga |
306 |
Q |
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||||||||||||||| |
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| T |
43537786 |
tcaatgcatgcttga |
43537800 |
T |
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