View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21068_low_32 (Length: 217)
Name: NF21068_low_32
Description: NF21068
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21068_low_32 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 175; Significance: 2e-94; HSPs: 22)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 39493434 - 39493612
Alignment:
| Q |
1 |
ttaaaacctcatcctcatcgaaaggtggaaccagtccataaattgacagaaggagtagaaaacctagaaccgcaactgaattttctgtgttttgacttat |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39493434 |
ttaaaacctcatcctcatcgaaagatggaaccagtccataaattgacagaaggagtagaaaacctagaaccgcaactgaattttctgtgttttgacttat |
39493533 |
T |
|
| Q |
101 |
gttagctttcatatcaagtgctagcttcattgcttcttcttttacatgaggtctaatatctggtgagattttcctcagt |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39493534 |
gttagctttcatatcaagtgctagcttcattgcttcttcttttacatgaggtctaatatctggtgagattttcctcagt |
39493612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 39144783 - 39144605
Alignment:
| Q |
1 |
ttaaaacctcatcctcatcgaaaggtggaaccagtccataaattgacagaaggagtagaaaacctagaaccgcaactgaattttctgtgttttgacttat |
100 |
Q |
| |
|
||||||| ||||| |||| ||||| |||| |||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
39144783 |
ttaaaacatcatcttcattgaaagatggacccagcccataaattgacagaaggagtagaaaacctagaatcgccgctgaattttctgtgttttgacttat |
39144684 |
T |
|
| Q |
101 |
gttagctttcatatcaagtgctagcttcattgcttcttcttttacatgaggtctaatatctggtgagattttcctcagt |
179 |
Q |
| |
|
|| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
39144683 |
attggctttcaaatcaagtgctagcttcattgcttcttcttttacatgaggtttaatatctagtgagattttcctcagt |
39144605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 39425545 - 39425702
Alignment:
| Q |
18 |
tcgaaaggtggaaccagtccataaattgacagaaggagtagaaaacctagaaccgcaactgaattttctgtgttttgacttatgttagctttcatatcaa |
117 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| ||||||||||| ||||| || |||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
39425545 |
tcgaaagaaggaaccagtccataaattgacagaagaagtagaaaaccaagaacagccgctgaattttcattgttttgacttatgttagctttcaaatcaa |
39425644 |
T |
|
| Q |
118 |
gtgctagcttcattgcttcttcttttacatgaggtctaatatctggtgagattttcct |
175 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||| |
|
|
| T |
39425645 |
gtgctaacttcattgcttcttcttttacatcaggtctaatatccggtgagattctcct |
39425702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 39604503 - 39604340
Alignment:
| Q |
1 |
ttaaaacctcatcctcatcgaaaggtggaaccagtccataaattgacagaaggagtagaaaacctagaaccgcaactgaattttctgtgttttgacttat |
100 |
Q |
| |
|
||||||| ||||| |||||||||| ||| ||| |||||||||||||| ||||||||||||||| ||||| || || ||||||| || |||| |||||| |
|
|
| T |
39604503 |
ttaaaacttcatcttcatcgaaagaaggagccaatccataaattgacacaaggagtagaaaacccagaactgccaccaaattttcggtattttcacttat |
39604404 |
T |
|
| Q |
101 |
gttagctttcatatcaagtgctagcttcattgcttcttcttttacatgaggtctaatatctggt |
164 |
Q |
| |
|
||||| ||||| || ||||||||||||||||||||||||| ||||| ||||| |||||| |||| |
|
|
| T |
39604403 |
gttagatttcaaattaagtgctagcttcattgcttcttctcttacacgaggtttaatatgtggt |
39604340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 39188749 - 39188927
Alignment:
| Q |
1 |
ttaaaacctcatcctcatcgaaaggtggaaccagtccataaattgacagaaggagtagaaaacctagaaccgcaactgaattttctgtgttttgacttat |
100 |
Q |
| |
|
||||||| ||||| |||| ||||| ||||||| ||||||||||| ||||||||||||||||| |||||| | | |||||| | | |||| | || |
|
|
| T |
39188749 |
ttaaaacatcatcttcattgaaagaaggaaccaaaccataaattgatagaaggagtagaaaaccaagaaccaccaaagaatttccattattttctttcat |
39188848 |
T |
|
| Q |
101 |
gttagctttcatatcaagtgctagcttcattgcttcttcttttacatgaggtctaatatctggtgagattttcctcagt |
179 |
Q |
| |
|
||||||||| | |||||||||||| |||||||| || ||| ||||||||||| |||| || ||||||||| || ||||| |
|
|
| T |
39188849 |
gttagcttttaaatcaagtgctagtttcattgcatcctctcttacatgaggtttaatgtcaggtgagattctcatcagt |
39188927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 39216816 - 39216666
Alignment:
| Q |
29 |
aaccagtccataaattgacagaaggagtagaaaacctagaaccgcaactgaattttctgtgttttgacttatgttagctttcatatcaagtgctagcttc |
128 |
Q |
| |
|
||||| |||||||||||||| ||| || |||||||| |||||| | | ||||||| || |||| ||| ||||||| ||||| ||||| |||||||||| |
|
|
| T |
39216816 |
aaccaatccataaattgacaaaagcagaagaaaaccgagaaccaccaaagaatttttagtattttcactcatgttagatttcaaatcaaatgctagcttc |
39216717 |
T |
|
| Q |
129 |
attgcttcttcttttacatgaggtctaatatctggtgagattttcctcagt |
179 |
Q |
| |
|
| |||||||||| ||||| |||| |||||| |||||||||||| ||||| |
|
|
| T |
39216716 |
aatgcttcttctcttacacaaggtttaatatgaggtgagattttcatcagt |
39216666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 2362858 - 2362688
Alignment:
| Q |
9 |
tcatcctcatcgaaaggtggaaccagtccataaattgacagaaggagtagaaaacctagaaccgcaactgaattttctgtgttttgacttatgttagctt |
108 |
Q |
| |
|
||||| |||||||||| | ||||| ||||||||||||||||||||| | ||| || ||||| | |||| |||||| || |||| | |||| ||||| |
|
|
| T |
2362858 |
tcatcttcatcgaaagaagaaaccaatccataaattgacagaaggagcaaaaaccccagaactggcactggattttcagtattttcgccaatgtaagctt |
2362759 |
T |
|
| Q |
109 |
tcatatcaagtgctagcttcattgcttcttcttttacatgaggtctaatatctggtgagattttcctcagt |
179 |
Q |
| |
|
||| | ||||||||||||||||||||||||| ||||||||| ||| || |||||||||| || ||||| |
|
|
| T |
2362758 |
tcagtttaagtgctagcttcattgcttcttctcgcacatgaggtttaacatgtggtgagattctcatcagt |
2362688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 39099774 - 39099596
Alignment:
| Q |
1 |
ttaaaacctcatcctcatcgaaaggtggaaccagtccataaattgacagaaggagtagaaaacctagaaccgcaactgaattttctgtgttttgacttat |
100 |
Q |
| |
|
||||||| ||||| ||||| |||| ||| ||| | ||||||||||||||||||||||||||| |||||||| || |||||||| || ||| |||||| |
|
|
| T |
39099774 |
ttaaaacttcatcttcatcaaaagaaggagccaatttataaattgacagaaggagtagaaaaccaagaaccgccaccgaattttcagtagtttcacttat |
39099675 |
T |
|
| Q |
101 |
gttagctttcatatcaagtgctagcttcattgcttcttcttttacatgaggtctaatatctggtgagattttcctcagt |
179 |
Q |
| |
|
|| ||||| | |||||| |||||||| ||||||||| ||||| |||| | |||| |||||||||| || ||||| |
|
|
| T |
39099674 |
aaaagatttcaacttaagtgccagcttcatcgcttcttctcttacacaaggtttgatatgtggtgagattctcatcagt |
39099596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 39380497 - 39380634
Alignment:
| Q |
9 |
tcatcctcatcgaaaggtggaaccagtccataaattgacagaaggagtagaaaacctagaaccgcaactgaattttctgtgttttgacttatgttagctt |
108 |
Q |
| |
|
||||| |||||||||| | || || |||||||||||||| ||| |||||||| || |||||||| || |||| ||| || || | ||||||| ||||| |
|
|
| T |
39380497 |
tcatcttcatcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctt |
39380596 |
T |
|
| Q |
109 |
tcatatcaagtgctagcttcattgcttcttcttttaca |
146 |
Q |
| |
|
||| ||||||||||||| ||| |||||||||| ||||| |
|
|
| T |
39380597 |
tcaaatcaagtgctagcgtcagtgcttcttctcttaca |
39380634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 179
Target Start/End: Original strand, 39396649 - 39396825
Alignment:
| Q |
3 |
aaaacctcatcctcatcgaaaggtggaaccagtccataaattgacagaaggagtagaaaacctagaaccgcaactgaattttctgtgttttgacttatgt |
102 |
Q |
| |
|
||||| ||||| |||||||||| | || || |||||||||||||| ||| | | |||||| |||||||| | |||||||| || |||| || |||| |
|
|
| T |
39396649 |
aaaacttcatcttcatcgaaagaagtaagcaatccataaattgacaaaagcaacaaaaaaccaagaaccgccaaagaattttcagtattttctctaatgt |
39396748 |
T |
|
| Q |
103 |
tagctttcatatcaagtgctagcttcattgcttcttcttttacatgaggtctaatatctggtgagattttcctcagt |
179 |
Q |
| |
|
|||| ||| |||| |||||||||||| |||||||||| ||||| |||||||||| |||||||||| || ||||| |
|
|
| T |
39396749 |
aagctctcaaatcatgtgctagcttcagtgcttcttctcttacacaaggtctaatagttggtgagattctcatcagt |
39396825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 179
Target Start/End: Original strand, 39196542 - 39196683
Alignment:
| Q |
38 |
ataaattgacagaaggagtagaaaacctagaaccgcaactgaattttctgtgttttgacttatgttagctttcatatcaagtgctagcttcattgcttct |
137 |
Q |
| |
|
||||||||||| ||| || ||||| || |||||||| | |||||||| || || | | | ||||||||||||| ||||| ||||||||||| ||||||| |
|
|
| T |
39196542 |
ataaattgacaaaagcagcagaaagccaagaaccgccaaagaattttcagtattgtcattcatgttagctttcaaatcaaatgctagcttcaatgcttct |
39196641 |
T |
|
| Q |
138 |
tcttttacatgaggtctaatatctggtgagattttcctcagt |
179 |
Q |
| |
|
| | | ||| |||| ||||||||||||||||| || ||||| |
|
|
| T |
39196642 |
tttctcacacaaggtttaatatctggtgagattctcatcagt |
39196683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 179
Target Start/End: Complemental strand, 39126623 - 39126495
Alignment:
| Q |
51 |
aggagtagaaaacctagaaccgcaactgaattttctgtgttttgacttatgttagctttcatatcaagtgctagcttcattgcttcttcttttacatgag |
150 |
Q |
| |
|
|||||||||||||| |||| ||| |||||||| || |||| ||||||||||| ||||| | ||| ||||||||||||||||||||| ||||| ||| |
|
|
| T |
39126623 |
aggagtagaaaacccagaatcgccgctgaatttcaggttttttcacttatgttagatttcaatttaagagctagcttcattgcttcttctcttacacgag |
39126524 |
T |
|
| Q |
151 |
gtctaatatctggtgagattttcctcagt |
179 |
Q |
| |
|
|| ||||| | |||||||| || ||||| |
|
|
| T |
39126523 |
gttcaatatttagtgagattctcatcagt |
39126495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 39421279 - 39421356
Alignment:
| Q |
102 |
ttagctttcatatcaagtgctagcttcattgcttcttcttttacatgaggtctaatatctggtgagattttcctcagt |
179 |
Q |
| |
|
|||||||||| |||||| || ||||||| |||||||||||||||| || | |||||| ||||||||||||| ||||| |
|
|
| T |
39421279 |
ttagctttcaaatcaagagcgagcttcaatgcttcttcttttacacaagttttaatatgtggtgagattttcatcagt |
39421356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 39138735 - 39138655
Alignment:
| Q |
99 |
atgttagctttcatatcaagtgctagcttcattgcttcttcttttacatgaggtctaatatctggtgagattttcctcagt |
179 |
Q |
| |
|
||||||||||||| || |||||||||||||| |||||||||| |||||| |||| |||| | ||||||||| || ||||| |
|
|
| T |
39138735 |
atgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcaggtttaatcttcggtgagattctcatcagt |
39138655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 39371206 - 39371132
Alignment:
| Q |
99 |
atgttagctttcatatcaagtgctagcttcattgcttcttcttttacatgaggtctaatatctggtgagattttc |
173 |
Q |
| |
|
||||| ||||||||||||||||||||||||| |||||| ||| ||||| ||| ||||| ||||||||||||| |
|
|
| T |
39371206 |
atgttggctttcatatcaagtgctagcttcaatgcttcatctcttacacaaggctcaatatttggtgagattttc |
39371132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 158
Target Start/End: Original strand, 44895136 - 44895259
Alignment:
| Q |
35 |
tccataaattgacagaaggagtagaaaacctagaaccgcaactgaattttctgtgttttgacttatgttagctttcatatcaagtgctagcttcattgct |
134 |
Q |
| |
|
|||||||||||||| ||| ||||||||||| |||||| | | |||||||| || ||| ||||||||||||| | | | |||||||||||| |||| |
|
|
| T |
44895136 |
tccataaattgacaaaagcagtagaaaaccaagaaccaccaaagaattttcagtatttccttttatgttagctttgaatttatgtgctagcttcaatgct |
44895235 |
T |
|
| Q |
135 |
tcttcttttacatgaggtctaata |
158 |
Q |
| |
|
| |||| ||||| ||||| ||||| |
|
|
| T |
44895236 |
tgttctcttacacgaggtttaata |
44895259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 39153218 - 39153068
Alignment:
| Q |
29 |
aaccagtccataaattgacagaaggagtagaaaacctagaaccgcaactgaattttctgtgttttgacttatgttagctttcatatcaagtgctagcttc |
128 |
Q |
| |
|
||||| ||||||||| |||| || ||||||||||| |||||| | | |||||||| || |||| |||| |||||||||| |||| |||| || ||| |
|
|
| T |
39153218 |
aaccaatccataaatcgacaaaaccagtagaaaaccaagaaccaccaaagaattttcagtattttcttttattttagctttcaaatcatgtgcgagtttc |
39153119 |
T |
|
| Q |
129 |
attgcttcttcttttacatgaggtctaatatctggtgagattttcctcagt |
179 |
Q |
| |
|
| |||||||||| ||||| |||| |||| | ||||||||| || ||||| |
|
|
| T |
39153118 |
aatgcttcttctcttacacaaggtttaatcttcggtgagattctcatcagt |
39153068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 39387524 - 39387634
Alignment:
| Q |
36 |
ccataaattgacagaaggagtagaaaacctagaaccgcaactgaattttctgtgttttgacttatgttagctttcatatcaagtgctagcttcattgctt |
135 |
Q |
| |
|
||||||||||||| ||| || |||||||| ||||| || | |||||||| || |||| | ||||||||||| | |||| | |||||||||| ||||| |
|
|
| T |
39387524 |
ccataaattgacaaaagcagcagaaaaccaagaacggccaaagaattttcagtattttctttcatgttagcttttaaatcacgcgctagcttcaatgctt |
39387623 |
T |
|
| Q |
136 |
cttcttttaca |
146 |
Q |
| |
|
||| ||||||| |
|
|
| T |
39387624 |
ctttttttaca |
39387634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 179
Target Start/End: Original strand, 39205774 - 39205915
Alignment:
| Q |
38 |
ataaattgacagaaggagtagaaaacctagaaccgcaactgaattttctgtgttttgacttatgttagctttcatatcaagtgctagcttcattgcttct |
137 |
Q |
| |
|
|||||| |||| ||| ||||||||||| |||||||| | |||||||| || |||| | || |||||||||| |||| ||||||||||| ||||| | |
|
|
| T |
39205774 |
ataaatcgacaaaagcagtagaaaaccaagaaccgccatagaattttcagtattttctttcatcttagctttcaagtcaaatgctagcttcaatgctttt |
39205873 |
T |
|
| Q |
138 |
tcttttacatgaggtctaatatctggtgagattttcctcagt |
179 |
Q |
| |
|
||| | ||| |||| |||| ||||||||||| || ||||| |
|
|
| T |
39205874 |
tctctcacacaaggttcaataactggtgagattctcatcagt |
39205915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 39413124 - 39413161
Alignment:
| Q |
101 |
gttagctttcatatcaagtgctagcttcattgcttctt |
138 |
Q |
| |
|
||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
39413124 |
gttagctttcaaatcaagtgctagcttcaatgcttctt |
39413161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 31606536 - 31606572
Alignment:
| Q |
35 |
tccataaattgacagaaggagtagaaaacctagaacc |
71 |
Q |
| |
|
||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
31606536 |
tccataaattgacggaaggagtagaaaaccaagaacc |
31606572 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 44624871 - 44624791
Alignment:
| Q |
99 |
atgttagctttcatatcaagtgctagcttcattgcttcttcttttacatgaggtctaatatctggtgagattttcctcagt |
179 |
Q |
| |
|
||||||||||||| ||| | |||||||||| |||||| ||| ||||| |||| |||||| |||||||||| || ||||| |
|
|
| T |
44624871 |
atgttagctttcaactcacgcgctagcttcaatgcttcatctcttacacaaggtttaatatttggtgagattgtcatcagt |
44624791 |
T |
|
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Target: chr3 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 170
Target Start/End: Complemental strand, 51576146 - 51576003
Alignment:
| Q |
27 |
ggaaccagtccataaattgacagaaggagtagaaaacctagaaccgcaactgaattttctgtgttttgacttatgttagctttcatatcaagtgctagct |
126 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||| |||| |||||| | || |||||||| || |||| ||| |||| ||||||| || || |||| | |
|
|
| T |
51576146 |
ggaaccaatccataaattgacagaaggagcagataaccaagaaccaccacggaattttcagtattttcactaatgtacgctttcaaattgaggactagtt |
51576047 |
T |
|
| Q |
127 |
tcattgcttcttcttttacatgaggtctaatatctggtgagatt |
170 |
Q |
| |
|
||| ||||||||||| |||||||||| | |||| |||||||||| |
|
|
| T |
51576046 |
tcaatgcttcttcttgtacatgaggtttgatatgtggtgagatt |
51576003 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 19808992 - 19808912
Alignment:
| Q |
99 |
atgttagctttcatatcaagtgctagcttcattgcttcttcttttacatgaggtctaatatctggtgagattttcctcagt |
179 |
Q |
| |
|
||||||||||||| ||||||||||||||||| || ||||||| ||||| |||| |||| | ||||||||| || ||||| |
|
|
| T |
19808992 |
atgttagctttcaaatcaagtgctagcttcaatgtttcttctcttacaccaggtttaatcttcggtgagattctcatcagt |
19808912 |
T |
|
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Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 33562378 - 33562298
Alignment:
| Q |
99 |
atgttagctttcatatcaagtgctagcttcattgcttcttcttttacatgaggtctaatatctggtgagattttcctcagt |
179 |
Q |
| |
|
||||||||||||| ||||| ||||||||||| |||||||| | | ||| |||| |||||||||||||||| || ||||| |
|
|
| T |
33562378 |
atgttagctttcaaatcaaatgctagcttcaatgcttcttttctcacacaaggttcaatatctggtgagattctcatcagt |
33562298 |
T |
|
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Target: chr4 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 33152299 - 33152229
Alignment:
| Q |
1 |
ttaaaacctcatcctcatcgaaaggtggaaccagtccataaattgacagaaggagtagaaaacctagaacc |
71 |
Q |
| |
|
||||||| ||||| ||||| |||| || ||||| ||||||||||||||||| || |||||||| |||||| |
|
|
| T |
33152299 |
ttaaaacttcatcttcatcaaaagatgaaaccaacccataaattgacagaagtagcagaaaacccagaacc |
33152229 |
T |
|
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