View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21068_low_33 (Length: 208)
Name: NF21068_low_33
Description: NF21068
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21068_low_33 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 11 - 208
Target Start/End: Complemental strand, 30498478 - 30498281
Alignment:
| Q |
11 |
aaggaagagagaaactataatgaagaagaagatcactgtgtacttgcatctaggaggatgattttccatgatggagttattgtttttgaatgaagagact |
110 |
Q |
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| T |
30498478 |
aaggaagagagaaactataatgaagaagaagatcactgtgtacttgcatctaggaggatgattttccatgatggagttattgtttttgaatgaagagact |
30498379 |
T |
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| Q |
111 |
tgtgaaatttgtagaaagaataataatgaatatgtcttgaaacttactcaaggaacaaaattatgtcttgatgctatgaaggtgttggccatcccttt |
208 |
Q |
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| T |
30498378 |
tgtgaaatttgtagaaagaataataatgaatatgtcttgaaacttactcaaggaacaaaattatgtcttgatgctatgaaggtgttggccatcccttt |
30498281 |
T |
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