View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2106_high_6 (Length: 237)
Name: NF2106_high_6
Description: NF2106
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2106_high_6 |
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Alignment Details
Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 11178901 - 11178681
Alignment:
| Q |
1 |
aagccggtattaagaacttttttgttgttgttatttgtaaacttttactagcaatcaagaatgatgctagttggagcattttcatgcgagcatgcaaata |
100 |
Q |
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| T |
11178901 |
aagccggtattaagaacttttttgttgttgttatttgtaaacttttactagcaatcaagaatgatgctagttggagcattttcatgcgagcatgcaaata |
11178802 |
T |
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| Q |
101 |
acgacaataattgctgatacaaccaaacacatcgttggcacttctattgtggtttaaaactctctatataaaccacttctcaaaatgaagttgagatacg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11178801 |
acgacaataattgctgatacaaccaaacacatcgttggcacttctattgtggtttcaaactctctatataaaccacttctcaaaatgaagttgagatacg |
11178702 |
T |
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| Q |
201 |
gaagagacgttaagaggagac |
221 |
Q |
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||||||||||||||||||||| |
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| T |
11178701 |
gaagagacgttaagaggagac |
11178681 |
T |
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