View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2106_low_1 (Length: 442)
Name: NF2106_low_1
Description: NF2106
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2106_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 432; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 432; E-Value: 0
Query Start/End: Original strand, 1 - 436
Target Start/End: Original strand, 21829982 - 21830417
Alignment:
| Q |
1 |
caacaatgaagcacctcttcttttacttaaccttaaacttcttgatatataagaatctgaacctagcttcttaccatatccattgtttcttccgtaatta |
100 |
Q |
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| T |
21829982 |
caacaatgaagcacctcttcttttacttaaccttaaacttcttgatatataagaatctgaacctagcttcttaccatatccattgtttcttccgtaatta |
21830081 |
T |
|
| Q |
101 |
cgtcgtctcattagatcatttataaactgattatgtccaatggtgttttcaaattcttccattgttaactgtttacctgtttctaaatcgcttaaccgat |
200 |
Q |
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| T |
21830082 |
cgtcgtctcattagatcatttataaactgattatgtccaatggtgttttcaaattcttccattgttaactgtttacctgtttctaaatcgcttaaccgat |
21830181 |
T |
|
| Q |
201 |
tccacgtcccgttttcaccgtattcctttacaataaactcttttccagtatctaaatttttgattaaaaagaacgctccaagtcctgagctggatgttac |
300 |
Q |
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| T |
21830182 |
tccacgtcccgttttcaccgtattcctttacaataaactcttttccagtatctagatttttgattaaaaagaacgctccaagtcctgagctggatgttac |
21830281 |
T |
|
| Q |
301 |
catcggtgacgccgatggtaaatgcctaacagaggaatctccagaatccctcacaataattctatttatatctgcatgacgagcacatgtgctcgccatg |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21830282 |
catcggtgacgccgatggtaaatgcctaacagaggaatctccagaatccctcacaataattctatttatatctgcatgacgagcacatgtgctcgccatg |
21830381 |
T |
|
| Q |
401 |
cctatatcagtattagttcttgttaacctttgcttc |
436 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
21830382 |
cctatatcagtattagttcttgttaacctttgcttc |
21830417 |
T |
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