View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21070_high_17 (Length: 273)
Name: NF21070_high_17
Description: NF21070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21070_high_17 |
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Alignment Details
Target: chr3 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 23506538 - 23506275
Alignment:
| Q |
1 |
tatagcaaaataggcaatgttttaggttactatttgtcccaaaaattgtttaatggttattcattgttcactgattttgagtttgacgtatgaaacgatg |
100 |
Q |
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| T |
23506538 |
tatagcaaaataggcaatgttttaggttactatttgtcccaaaaattgtttaatggttattcattgttcactgattttgagtttgacgtatgaaacgatg |
23506439 |
T |
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| Q |
101 |
gttttcattaatggttttgaggaaaaaatctaagggattttgtggcttggatgtagaaagagaaacgaagtgaaccaccttaaaatataggtattgaagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |
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| T |
23506438 |
gttttcattaatggttttgaggaaaaaatctaagggattttgtggcttggatgtagaaagagaaaccaagtgaaccaccttaaaagataggtattgaagt |
23506339 |
T |
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| Q |
201 |
tgtattgaagtgttacaaggttttggacctttagatccacaaatatggttggatatcttcatct |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23506338 |
tgtattgaagtgttacaaggttttggacctttagatccacaaatatggttggatatcttcatct |
23506275 |
T |
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