View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21072_high_26 (Length: 249)
Name: NF21072_high_26
Description: NF21072
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21072_high_26 |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 43885327 - 43885565
Alignment:
| Q |
1 |
attataattattaaaatcactaaaacatatcaacaagatctaaatgataaagatgtaagtgagtcctttgaataaatggttaagtgttcgatctcccaat |
100 |
Q |
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| T |
43885327 |
attataattattaaaatcactaaaacatatcaacaagatctaaatgataaagatgtaagtgagtcctttgaataaatggttaagtgttccatctcctaat |
43885426 |
T |
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| Q |
101 |
cttgcatggtgagaaaataaaaaacttgttgaaagagtaaaagctacatctatgtctctcccgcagcaatgtaattttcctaccaataatatggtaacat |
200 |
Q |
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| T |
43885427 |
cttgcacggtgagaaaataaaaatcttgtttaaagagtaaaagctacatctatgtctctcccgcagcaatgtcattttcctaccaataatatggtaacat |
43885526 |
T |
|
| Q |
201 |
tcaaaaacattcataaatgtttgatcctcgtatgttcat |
239 |
Q |
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| T |
43885527 |
tcaaaaacattcataaatgtttgatcctcgcatgttcat |
43885565 |
T |
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