View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21072_low_15 (Length: 295)

Name: NF21072_low_15
Description: NF21072
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21072_low_15
NF21072_low_15
[»] chr3 (51 HSPs)
chr3 (103-286)||(36354272-36354455)
chr3 (1-105)||(34912301-34912405)
chr3 (1-105)||(42490355-42490459)
chr3 (1-104)||(13499494-13499597)
chr3 (1-108)||(39866300-39866407)
chr3 (2-107)||(20765193-20765298)
chr3 (1-106)||(27010633-27010738)
chr3 (1-104)||(42761642-42761745)
chr3 (1-107)||(27334890-27334996)
chr3 (2-107)||(6910331-6910436)
chr3 (11-104)||(19823900-19823993)
chr3 (1-104)||(21797556-21797659)
chr3 (1-106)||(43467901-43468006)
chr3 (1-105)||(21005292-21005396)
chr3 (1-105)||(33415798-33415902)
chr3 (17-105)||(45613572-45613660)
chr3 (1-104)||(54507641-54507744)
chr3 (1-93)||(33803532-33803625)
chr3 (1-105)||(36227544-36227648)
chr3 (138-279)||(26181909-26182051)
chr3 (1-104)||(43181514-43181618)
chr3 (37-107)||(32220860-32220930)
chr3 (6-104)||(44561784-44561882)
chr3 (1-73)||(38137855-38137927)
chr3 (1-63)||(30213845-30213907)
chr3 (2-98)||(25527412-25527506)
chr3 (1-105)||(15332965-15333069)
chr3 (1-103)||(41252922-41253024)
chr3 (137-213)||(29586254-29586330)
chr3 (20-99)||(22786635-22786714)
chr3 (76-106)||(19912187-19912217)
chr3 (21-99)||(22782271-22782349)
chr3 (75-105)||(27010473-27010503)
chr3 (76-106)||(38806354-38806384)
chr3 (27-101)||(42049784-42049858)
chr3 (137-215)||(48950537-48950615)
chr3 (76-109)||(198850-198883)
chr3 (75-104)||(6910567-6910596)
chr3 (76-105)||(12094581-12094610)
chr3 (75-108)||(13499331-13499364)
chr3 (76-105)||(19241917-19241946)
chr3 (75-104)||(20765429-20765458)
chr3 (76-105)||(29375137-29375166)
chr3 (177-242)||(34373638-34373703)
chr3 (177-242)||(34373788-34373853)
chr3 (75-104)||(42761483-42761512)
chr3 (188-233)||(43092981-43093026)
chr3 (1-89)||(3430433-3430521)
chr3 (177-241)||(27033608-27033672)
chr3 (1-65)||(27813447-27813511)
chr3 (76-104)||(36881282-36881310)
[»] chr7 (60 HSPs)
chr7 (1-107)||(16778502-16778608)
chr7 (1-110)||(47156021-47156130)
chr7 (1-105)||(28061674-28061778)
chr7 (1-104)||(36623308-36623411)
chr7 (1-105)||(38852006-38852110)
chr7 (1-105)||(41897987-41898091)
chr7 (1-104)||(20885103-20885206)
chr7 (1-98)||(40256063-40256160)
chr7 (1-104)||(32431517-32431620)
chr7 (4-104)||(46322127-46322227)
chr7 (1-104)||(7457881-7457983)
chr7 (1-104)||(40090077-40090180)
chr7 (1-104)||(42890502-42890605)
chr7 (1-104)||(48602436-48602539)
chr7 (1-106)||(25566707-25566811)
chr7 (1-104)||(36585109-36585212)
chr7 (1-104)||(42877386-42877489)
chr7 (1-106)||(44732010-44732115)
chr7 (1-104)||(8683818-8683921)
chr7 (1-104)||(39130085-39130188)
chr7 (1-99)||(7438908-7439006)
chr7 (1-95)||(46479838-46479932)
chr7 (2-97)||(3851084-3851176)
chr7 (1-97)||(6174843-6174939)
chr7 (1-97)||(30342081-30342177)
chr7 (1-105)||(35117125-35117228)
chr7 (2-104)||(41088587-41088689)
chr7 (1-94)||(11502739-11502832)
chr7 (143-249)||(40019605-40019710)
chr7 (1-104)||(46103529-46103625)
chr7 (1-106)||(6766709-6766814)
chr7 (2-97)||(7169133-7169228)
chr7 (1-104)||(41134647-41134745)
chr7 (2-105)||(2198601-2198704)
chr7 (21-104)||(36341620-36341703)
chr7 (1-94)||(5788536-5788629)
chr7 (6-106)||(42662185-42662284)
chr7 (27-104)||(35570239-35570316)
chr7 (1-101)||(26161599-26161699)
chr7 (1-97)||(27045567-27045663)
chr7 (7-97)||(4131668-4131758)
chr7 (75-109)||(25566543-25566577)
chr7 (24-104)||(45331915-45331992)
chr7 (6-104)||(49110634-49110732)
chr7 (1-97)||(5529018-5529114)
chr7 (76-108)||(25060158-25060190)
chr7 (75-107)||(28061512-28061544)
chr7 (75-107)||(41898221-41898253)
chr7 (75-107)||(47156260-47156292)
chr7 (1-104)||(3785520-3785623)
chr7 (76-107)||(27813808-27813839)
chr7 (76-105)||(10981507-10981536)
chr7 (177-242)||(21151109-21151174)
chr7 (75-104)||(36623541-36623570)
chr7 (75-104)||(46103370-46103399)
chr7 (210-262)||(4705380-4705432)
chr7 (177-249)||(7362525-7362597)
chr7 (1-33)||(23707582-23707614)
chr7 (177-241)||(45260481-45260545)
chr7 (75-103)||(48602669-48602697)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-105)||(100806-100910)
scaffold0022 (75-104)||(100647-100676)
[»] chr6 (47 HSPs)
chr6 (1-107)||(32671813-32671919)
chr6 (1-107)||(4147928-4148034)
chr6 (1-105)||(18668847-18668951)
chr6 (1-109)||(32414838-32414946)
chr6 (1-105)||(19088117-19088221)
chr6 (1-104)||(22054772-22054875)
chr6 (1-104)||(24624100-24624203)
chr6 (1-109)||(17213943-17214051)
chr6 (1-104)||(6563226-6563329)
chr6 (1-108)||(20226457-20226564)
chr6 (1-108)||(22120441-22120548)
chr6 (1-106)||(17257810-17257915)
chr6 (11-109)||(25475977-25476075)
chr6 (1-96)||(31569185-31569280)
chr6 (1-97)||(3989423-3989518)
chr6 (1-97)||(15383089-15383185)
chr6 (4-107)||(20437175-20437279)
chr6 (1-93)||(28477764-28477856)
chr6 (1-105)||(29790205-29790309)
chr6 (2-73)||(1040855-1040926)
chr6 (2-104)||(10520468-10520570)
chr6 (5-93)||(29693894-29693982)
chr6 (2-93)||(21540789-21540880)
chr6 (1-108)||(15337484-15337591)
chr6 (1-106)||(24955555-24955654)
chr6 (144-255)||(236071-236183)
chr6 (56-105)||(16193052-16193101)
chr6 (75-111)||(18668681-18668717)
chr6 (143-242)||(1249199-1249298)
chr6 (70-109)||(32420748-32420787)
chr6 (3-73)||(19240753-19240823)
chr6 (1-98)||(31869714-31869811)
chr6 (1-93)||(12225986-12226078)
chr6 (78-109)||(19996742-19996773)
chr6 (1-103)||(4440851-4440953)
chr6 (144-242)||(4804372-4804470)
chr6 (144-242)||(7162008-7162106)
chr6 (76-106)||(15064943-15064973)
chr6 (75-105)||(19087957-19087987)
chr6 (75-105)||(20437016-20437046)
chr6 (75-105)||(24623940-24623970)
chr6 (76-105)||(1605578-1605607)
chr6 (76-105)||(7761300-7761329)
chr6 (76-105)||(19996321-19996350)
chr6 (75-104)||(22055005-22055034)
chr6 (76-105)||(29260191-29260220)
chr6 (76-104)||(8626482-8626510)
[»] chr8 (51 HSPs)
chr8 (1-106)||(42587407-42587512)
chr8 (1-109)||(623171-623279)
chr8 (1-108)||(616779-616886)
chr8 (1-106)||(32998448-32998553)
chr8 (1-104)||(14237280-14237383)
chr8 (1-104)||(18044425-18044528)
chr8 (1-101)||(3100654-3100754)
chr8 (1-104)||(132017-132120)
chr8 (1-104)||(5878317-5878419)
chr8 (1-104)||(8394346-8394449)
chr8 (1-104)||(40494384-40494487)
chr8 (1-104)||(41263810-41263913)
chr8 (2-104)||(24524100-24524202)
chr8 (2-108)||(35403512-35403618)
chr8 (2-99)||(4270252-4270349)
chr8 (1-107)||(22489433-22489539)
chr8 (1-98)||(2766207-2766304)
chr8 (1-93)||(13216880-13216972)
chr8 (1-104)||(36642017-36642121)
chr8 (1-97)||(38957177-38957273)
chr8 (1-105)||(36167075-36167179)
chr8 (40-105)||(13217219-13217284)
chr8 (1-106)||(33700232-33700338)
chr8 (1-94)||(11637792-11637885)
chr8 (7-105)||(6414130-6414228)
chr8 (40-102)||(38497085-38497147)
chr8 (163-261)||(13585955-13586053)
chr8 (6-73)||(3370420-3370487)
chr8 (75-107)||(617016-617048)
chr8 (75-107)||(623409-623441)
chr8 (188-260)||(44517697-44517769)
chr8 (2-73)||(5173282-5173353)
chr8 (75-109)||(2766043-2766077)
chr8 (76-106)||(40058552-40058582)
chr8 (75-105)||(40494617-40494647)
chr8 (75-108)||(5878549-5878582)
chr8 (76-105)||(8697923-8697952)
chr8 (75-104)||(14237513-14237542)
chr8 (177-242)||(30426722-30426787)
chr8 (76-105)||(40918978-40919007)
chr8 (76-105)||(41307986-41308015)
chr8 (76-108)||(2540180-2540212)
chr8 (75-103)||(3100492-3100520)
chr8 (76-104)||(3585451-3585479)
chr8 (1-101)||(18090332-18090431)
chr8 (76-104)||(27034997-27035025)
chr8 (76-104)||(36068080-36068108)
chr8 (76-104)||(37345571-37345599)
chr8 (76-104)||(40486478-40486506)
chr8 (76-104)||(43275646-43275674)
chr8 (76-104)||(45278726-45278754)
[»] chr2 (40 HSPs)
chr2 (1-105)||(39358145-39358249)
chr2 (1-107)||(2183116-2183222)
chr2 (1-106)||(19141225-19141330)
chr2 (1-104)||(8042181-8042284)
chr2 (1-102)||(5404998-5405099)
chr2 (1-104)||(7608049-7608152)
chr2 (1-104)||(44365157-44365260)
chr2 (1-97)||(6223073-6223169)
chr2 (1-90)||(11841752-11841841)
chr2 (4-104)||(33607377-33607476)
chr2 (1-104)||(19262680-19262783)
chr2 (1-104)||(7799847-7799950)
chr2 (1-93)||(36072185-36072277)
chr2 (140-256)||(6591101-6591217)
chr2 (2-98)||(32774597-32774693)
chr2 (25-105)||(36719502-36719581)
chr2 (1-107)||(9006943-9007049)
chr2 (1-59)||(13125304-13125362)
chr2 (2-69)||(44644905-44644972)
chr2 (1-94)||(11931701-11931794)
chr2 (1-93)||(43444699-43444791)
chr2 (1-108)||(24251956-24252063)
chr2 (22-72)||(22839107-22839157)
chr2 (1-107)||(42133749-42133855)
chr2 (188-286)||(36758722-36758815)
chr2 (75-107)||(5405229-5405261)
chr2 (75-107)||(7608282-7608314)
chr2 (22-106)||(13598440-13598523)
chr2 (75-107)||(19141063-19141095)
chr2 (7-54)||(9172311-9172358)
chr2 (143-242)||(13238604-13238703)
chr2 (76-106)||(3518906-3518936)
chr2 (144-242)||(35316749-35316847)
chr2 (75-104)||(11841593-11841622)
chr2 (76-105)||(12969988-12970017)
chr2 (75-104)||(44365390-44365419)
chr2 (84-112)||(441411-441439)
chr2 (76-104)||(1102503-1102531)
chr2 (1-89)||(16865069-16865157)
chr2 (76-104)||(34224403-34224431)
[»] chr1 (55 HSPs)
chr1 (1-105)||(30701717-30701821)
chr1 (1-109)||(6402569-6402677)
chr1 (1-104)||(16120599-16120702)
chr1 (1-104)||(36399098-36399201)
chr1 (1-107)||(52024023-52024129)
chr1 (1-105)||(6766371-6766475)
chr1 (1-105)||(11641226-11641330)
chr1 (1-105)||(30003532-30003636)
chr1 (1-105)||(40771931-40772035)
chr1 (3-109)||(42788703-42788809)
chr1 (1-106)||(17305952-17306057)
chr1 (1-105)||(36757645-36757749)
chr1 (1-105)||(24321258-24321364)
chr1 (1-100)||(40977647-40977746)
chr1 (1-102)||(27292642-27292743)
chr1 (2-101)||(26910079-26910178)
chr1 (1-104)||(9342804-9342907)
chr1 (1-106)||(42735324-42735432)
chr1 (1-107)||(4302115-4302221)
chr1 (1-91)||(15912495-15912585)
chr1 (143-277)||(49384678-49384810)
chr1 (5-59)||(42367459-42367513)
chr1 (1-105)||(44644514-44644618)
chr1 (1-88)||(48375018-48375105)
chr1 (1-95)||(28030840-28030934)
chr1 (1-98)||(15382585-15382682)
chr1 (1-105)||(44647872-44647976)
chr1 (161-235)||(37335999-37336074)
chr1 (6-93)||(38153441-38153528)
chr1 (144-245)||(12380960-12381061)
chr1 (144-245)||(12385027-12385128)
chr1 (6-94)||(3485371-3485459)
chr1 (1-105)||(27984555-27984658)
chr1 (1-89)||(30385304-30385392)
chr1 (76-108)||(44227844-44227876)
chr1 (148-286)||(5803769-5803907)
chr1 (75-106)||(36399331-36399362)
chr1 (76-107)||(41959822-41959853)
chr1 (136-242)||(5047434-5047539)
chr1 (177-243)||(7841762-7841828)
chr1 (76-106)||(9588668-9588698)
chr1 (75-105)||(11641066-11641096)
chr1 (26-103)||(25170880-25170955)
chr1 (75-105)||(36757485-36757515)
chr1 (75-105)||(40771771-40771801)
chr1 (76-109)||(284328-284361)
chr1 (76-105)||(3943059-3943088)
chr1 (76-109)||(3943776-3943809)
chr1 (177-242)||(12151724-12151789)
chr1 (75-104)||(52024259-52024288)
chr1 (45-105)||(19711891-19711951)
chr1 (76-104)||(23045528-23045556)
chr1 (76-104)||(24772154-24772182)
chr1 (6-97)||(34634914-34635005)
chr1 (76-104)||(41959078-41959106)
[»] chr5 (42 HSPs)
chr5 (2-107)||(8086190-8086295)
chr5 (1-104)||(978077-978180)
chr5 (1-104)||(40156198-40156301)
chr5 (1-107)||(33387217-33387323)
chr5 (1-99)||(14634316-14634414)
chr5 (2-107)||(33587629-33587734)
chr5 (1-105)||(18094240-18094344)
chr5 (1-104)||(9502786-9502889)
chr5 (1-92)||(11251126-11251217)
chr5 (2-105)||(34111961-34112064)
chr5 (1-95)||(3472436-3472530)
chr5 (1-106)||(30355033-30355137)
chr5 (1-104)||(24992297-24992400)
chr5 (7-107)||(11785891-11785991)
chr5 (1-105)||(38916409-38916513)
chr5 (40-104)||(9050763-9050827)
chr5 (1-104)||(7224165-7224268)
chr5 (1-104)||(24916405-24916510)
chr5 (137-245)||(3057333-3057441)
chr5 (1-105)||(39776629-39776733)
chr5 (6-104)||(12007796-12007894)
chr5 (45-103)||(12448275-12448333)
chr5 (143-204)||(128140-128201)
chr5 (38-104)||(10696790-10696856)
chr5 (75-108)||(9502623-9502656)
chr5 (28-105)||(18598543-18598620)
chr5 (2-106)||(20692551-20692653)
chr5 (6-63)||(31197854-31197911)
chr5 (1-100)||(32017217-32017316)
chr5 (144-242)||(32129670-32129768)
chr5 (75-104)||(978310-978339)
chr5 (75-104)||(14634157-14634186)
chr5 (1-58)||(27109735-27109791)
chr5 (1-94)||(27579589-27579681)
chr5 (76-109)||(30720741-30720774)
chr5 (75-104)||(33387452-33387481)
chr5 (177-242)||(35660662-35660727)
chr5 (1-73)||(12456799-12456871)
chr5 (76-104)||(12807102-12807130)
chr5 (76-104)||(15305237-15305265)
chr5 (76-104)||(25773649-25773677)
chr5 (143-235)||(27762836-27762927)
[»] chr4 (66 HSPs)
chr4 (1-106)||(38416809-38416914)
chr4 (136-264)||(33841835-33841963)
chr4 (1-104)||(26169986-26170089)
chr4 (1-105)||(47386445-47386549)
chr4 (1-104)||(2760886-2760989)
chr4 (2-104)||(35686373-35686475)
chr4 (1-105)||(35381053-35381157)
chr4 (1-104)||(17610280-17610383)
chr4 (1-104)||(25296739-25296842)
chr4 (1-104)||(29830343-29830446)
chr4 (1-104)||(44232236-44232339)
chr4 (1-104)||(54330849-54330952)
chr4 (1-104)||(55209733-55209836)
chr4 (1-106)||(43967721-43967826)
chr4 (1-105)||(38716886-38716989)
chr4 (1-101)||(55800837-55800937)
chr4 (1-94)||(12240337-12240430)
chr4 (1-104)||(31010214-31010317)
chr4 (1-101)||(55191827-55191927)
chr4 (1-95)||(12625260-12625354)
chr4 (1-105)||(50205742-50205846)
chr4 (1-104)||(26125708-26125811)
chr4 (1-104)||(19433517-19433624)
chr4 (1-97)||(25918210-25918306)
chr4 (2-101)||(17446793-17446892)
chr4 (1-104)||(9029608-9029714)
chr4 (1-97)||(50620841-50620937)
chr4 (1-100)||(3036984-3037083)
chr4 (6-104)||(36523132-36523230)
chr4 (1-73)||(45291863-45291935)
chr4 (1-104)||(27407778-27407881)
chr4 (21-111)||(5428571-5428661)
chr4 (1-105)||(54610861-54610966)
chr4 (1-73)||(19595736-19595808)
chr4 (137-279)||(3280868-3281010)
chr4 (1-104)||(39307696-39307799)
chr4 (1-67)||(4467678-4467744)
chr4 (3-98)||(34652208-34652303)
chr4 (144-242)||(18207093-18207191)
chr4 (1-93)||(2571041-2571133)
chr4 (1-105)||(7614614-7614718)
chr4 (1-105)||(37767117-37767221)
chr4 (1-105)||(38721336-38721440)
chr4 (20-109)||(19897634-19897723)
chr4 (75-108)||(26170220-26170253)
chr4 (6-107)||(29051681-29051782)
chr4 (6-93)||(23360189-23360273)
chr4 (144-242)||(12153095-12153193)
chr4 (75-109)||(45292065-45292099)
chr4 (144-242)||(56558203-56558301)
chr4 (75-104)||(2760730-2760759)
chr4 (75-104)||(4467520-4467549)
chr4 (76-105)||(12071560-12071589)
chr4 (177-242)||(12241461-12241526)
chr4 (76-105)||(14261043-14261072)
chr4 (75-104)||(19433358-19433387)
chr4 (76-105)||(21310424-21310453)
chr4 (76-105)||(25704650-25704679)
chr4 (75-104)||(38416650-38416679)
chr4 (76-105)||(40122734-40122763)
chr4 (75-104)||(44232077-44232106)
chr4 (75-104)||(55209574-55209603)
chr4 (132-204)||(4404212-4404284)
chr4 (79-107)||(12625488-12625516)
chr4 (76-104)||(34324832-34324860)
chr4 (177-249)||(39862474-39862546)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-107)||(161996-162102)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-104)||(70961-71063)
[»] scaffold0018 (1 HSPs)
scaffold0018 (2-101)||(67929-68028)
[»] scaffold0295 (2 HSPs)
scaffold0295 (1-107)||(13876-13982)
scaffold0295 (43-107)||(9369-9433)
[»] scaffold0099 (1 HSPs)
scaffold0099 (1-104)||(28811-28916)
[»] scaffold0225 (1 HSPs)
scaffold0225 (1-108)||(8992-9099)
[»] scaffold0468 (1 HSPs)
scaffold0468 (144-243)||(5534-5633)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-108)||(138189-138296)
[»] scaffold0456 (1 HSPs)
scaffold0456 (164-242)||(13640-13718)
[»] scaffold0012 (1 HSPs)
scaffold0012 (144-242)||(207987-208085)
[»] scaffold0744 (1 HSPs)
scaffold0744 (143-204)||(1161-1222)
[»] scaffold0595 (1 HSPs)
scaffold0595 (1-62)||(3990-4051)
[»] scaffold0006 (1 HSPs)
scaffold0006 (177-242)||(73893-73958)
[»] scaffold0257 (1 HSPs)
scaffold0257 (76-104)||(23467-23495)


Alignment Details
Target: chr3 (Bit Score: 172; Significance: 2e-92; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 103 - 286
Target Start/End: Complemental strand, 36354455 - 36354272
Alignment:
Q  103 tattaaaatagtaataatatgactagtttattttgagttgagatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaa 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36354455 tattaaaatagtaataatatgactagtttattttgagttgagatcctctccatttacaattctctcaatttcctcaatttagaaagataaagacacaaaa 36354356  T
Q  203 aatctcgaaaatagtatacaataattaatgatgatgggactcatttattgaaagcattcactttctcttttttgtgttcatctc 286  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36354355 aatcttgaaaatagtatacaataattaatgatgatgggactcatttattgaaagcatccactttctcttttttgtgttcatctc 36354272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 34912301 - 34912405
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34912301 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 34912400  T
Q  101 agtat 105  Q
     ||||    
T  34912401 ggtat 34912405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 42490355 - 42490459
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42490355 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 42490454  T
Q  101 agtat 105  Q
    |||||    
T  42490455 agtat 42490459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 13499494 - 13499597
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13499494 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 13499593  T
Q  101 agta 104  Q
    ||||    
T  13499594 agta 13499597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 39866300 - 39866407
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  39866300 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttaaaacggaggg 39866399  T
Q  101 agtattaa 108  Q
    ||||||||    
T  39866400 agtattaa 39866407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 20765298 - 20765193
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggga 101  Q
    |||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  20765298 taatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttaaaacggaggga 20765199  T
Q  102 gtatta 107  Q
    ||||||    
T  20765198 gtatta 20765193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 27010633 - 27010738
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| | | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27010633 ctaatatttgtatttatatattagttaaaaagtttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 27010732  T
Q  101 agtatt 106  Q
    ||||||    
T  27010733 agtatt 27010738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 42761642 - 42761745
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  42761642 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtattttgaaacggaggg 42761741  T
Q  101 agta 104  Q
    ||||    
T  42761742 agta 42761745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 27334890 - 27334996
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||    
T  27334890 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtattttgaaacggaagg 27334989  T
Q  101 agtatta 107  Q
    |||||||    
T  27334990 agtatta 27334996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 6910436 - 6910331
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggga 101  Q
    |||||||||||||| ||||||||||||||| ||| || |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  6910436 taatatttgtatttatacattagttaaaaaatatggttaaagtaagtcaagtgaatagtgtacattgtaaaagttggacatgtattttgaaacgggggga 6910337  T
Q  102 gtatta 107  Q
    ||||||    
T  6910336 gtatta 6910331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 19823993 - 19823900
Alignment:
Q  11 tatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagta 104  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19823993 tatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggagggagta 19823900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 21797659 - 21797556
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| |||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  21797659 ctaatatttgtatttatacattagttaaaaagtatggtcaaaataaatcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggagag 21797560  T
Q  101 agta 104  Q
    ||||    
T  21797559 agta 21797556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 43467901 - 43468006
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||||||| | |||| ||||| ||||||||| ||| |||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||| |    
T  43467901 ctaatattagaatttatacatcagttaaaaagtatggtcaaagtaagtcaagtgaatagtacacattgcaaaaattggtcatgtattttgaaacggagag 43468000  T
Q  101 agtatt 106  Q
    ||||||    
T  43468001 agtatt 43468006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 21005396 - 21005292
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||| ||||| || |||| ||||||| ||| |||||||||||| ||||||||||||||| |||||||| ||| ||||||||||||||||||||||    
T  21005396 ctaatatttatatttatatattaattaaaaagtatggtcaaagtaagtgaagtgaatagtgcacgttgcaaaaattgaacatgtattttgaaacggaggg 21005297  T
Q  101 agtat 105  Q
    |||||    
T  21005296 agtat 21005292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 33415902 - 33415798
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||| | ||||  ||||||||||||| |||||||||||||||||||| |||||    
T  33415902 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaataaataacgcacattgcaaaaattggacatgtattttgaaacagaggg 33415803  T
Q  101 agtat 105  Q
    |||||    
T  33415802 agtat 33415798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 45613660 - 45613572
Alignment:
Q  17 tacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagtat 105  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  45613660 tacattagttaaaaagtatagtcaaagtaagtcaagtaaatagtgcacattgcaaaaattggacatgaattttgaaacggatggagtat 45613572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 54507744 - 54507641
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||| ||||||| ||||||||||||||| |||  ||||| |||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||     
T  54507744 ctaatatctgtatttatacattagttaaaaagtataatcaaaataagtcaagtgaatagtgcatattgcaaaaattggatatgtattttgaaacggagga 54507645  T
Q  101 agta 104  Q
    ||||    
T  54507644 agta 54507641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 33803625 - 33803532
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaat-tattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaa 93  Q
    ||||||||| ||||| |||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  33803625 ctaatatttatatttatacattagttaaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtattttgaaa 33803532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 36227648 - 36227544
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||| || |||| ||| ||||||||||||||| |||||||||| |||||||||| ||| ||||| ||||| ||||||||||    
T  36227648 ctaatatttgtatttatacattaattgaaaaatatggtcaaagtaagtcaaatgaatagtgcgcattgcaaaaattgaacatgcattttaaaacggaggg 36227549  T
Q  101 agtat 105  Q
    |||||    
T  36227548 agtat 36227544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 138 - 279
Target Start/End: Original strand, 26181909 - 26182051
Alignment:
Q  138 agttgagatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgat 237  Q
    |||||| |||||||||||||||||||||||| ||||||   |  || ||||||||| |||||||||||||   |||||||||||||||||||||||||||    
T  26181909 agttgacatcctctccatttacaattctctccatttccttcaaataaaaagataaaaacacaaaaaatcttataaatagtatacaataattaatgatgat 26182008  T
Q  238 gggactca---tttattgaaagcattcactttctcttttttgtgt 279  Q
    | ||| ||   ||| |||||||||||||  || ||||||||||||    
T  26182009 gtgacccatttttttttgaaagcattca--ttatcttttttgtgt 26182051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 43181514 - 43181618
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaat-tattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagg 99  Q
    ||||||||| ||||| |||||||||||||||  ||| |||||||||| |||||||||||||||||||| | ||| ||  ||||||||||| ||||||| |    
T  43181514 ctaatatttatatttatacattagttaaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattacgaaaattaaacatgtatttttaaacggatg 43181613  T
Q  100 gagta 104  Q
    |||||    
T  43181614 gagta 43181618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 32220930 - 32220860
Alignment:
Q  37 gtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagtatta 107  Q
    |||||||||||||||||||||||| |||||||||||| ||  ||||||||||| ||||||| |||||||||    
T  32220930 gtcaaagtaagtcaagtgaatagtacacattgcaaaaattaaacatgtattttaaaacggatggagtatta 32220860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 44561882 - 44561784
Alignment:
Q  6 atttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagta 104  Q
    |||||||||| ||  ||||||||||| ||| |||||||||||||| |||||||||||||||||||||  |   ||||||||||||||||| | ||||||    
T  44561882 atttgtatttatatgttagttaaaaagtatggtcaaagtaagtcatgtgaatagtgcacattgcaaacatgcaacatgtattttgaaacgaaaggagta 44561784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 38137927 - 38137855
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaa 73  Q
    ||||||||||||||| ||||||||||||||| ||| |||||| ||| ||||| |||||||||| |||||||||    
T  38137927 ctaatatttgtatttatacattagttaaaaaatatggtcaaaataaatcaagcgaatagtgcagattgcaaaa 38137855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 30213907 - 30213845
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgca 63  Q
    ||||||||||||||| || |||||||||||| ||| |||||| ||||||||||||||||||||    
T  30213907 ctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaagtgaatagtgca 30213845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 25527506 - 25527412
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggag 98  Q
    |||||||||||||| || || ||||||||| ||| ||| |||||||||| |||||||   |||||||||||| |  ||||||||||| |||||||||    
T  25527506 taatatttgtatttatatatcagttaaaaaatatggtcgaagtaagtcatgtgaata--tcacattgcaaaaatgcgacatgtatttcgaaacggag 25527412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 15332965 - 15333069
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||| |||||||||| || |||||||||||| | | ||||||| |||  | ||||||||||||||||| |||| |  |||||||||||| |||| || ||    
T  15332965 ctaacatttgtatttatatattagttaaaaaatttggtcaaagcaagctatgtgaatagtgcacattgtaaaattgcgacatgtattttaaaacagaagg 15333064  T
Q  101 agtat 105  Q
    |||||    
T  15333065 agtat 15333069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 41252922 - 41253024
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||| |||||||||| || |||||||||||| ||| || ||||||||  |  |||||||||||||||| |||| |  ||||| ||||||||||| || ||    
T  41252922 ctaacatttgtatttatatattagttaaaaaatatggttaaagtaagctatatgaatagtgcacattgtaaaattgcgacatatattttgaaacagatgg 41253021  T
Q  101 agt 103  Q
    |||    
T  41253022 agt 41253024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 29586254 - 29586330
Alignment:
Q  137 gagttgagatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaa 213  Q
    ||||| ||||| ||||||||||  |||||||| |||||  | ||||||| ||||||||||||||||||  |||||||    
T  29586254 gagttaagatcatctccatttattattctctccatttcatccatttagagagataaagacacaaaaaaattcgaaaa 29586330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 22786714 - 22786635
Alignment:
Q  20 attagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagg 99  Q
    |||||||||||| ||  |||||||||||  | ||||||||||||||||  |||| |  |||||||| |||||||||||||    
T  22786714 attagttaaaaaatagagtcaaagtaagctatgtgaatagtgcacattaaaaaattgcgacatgtagtttgaaacggagg 22786635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 106
Target Start/End: Original strand, 19912187 - 19912217
Alignment:
Q  76 tggacatgtattttgaaacggagggagtatt 106  Q
    |||||||||||||||||||||||||||||||    
T  19912187 tggacatgtattttgaaacggagggagtatt 19912217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 22782349 - 22782271
Alignment:
Q  21 ttagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagg 99  Q
    ||||||||||| ||  |||||||||||  | ||||||||||||||||  |||| |  |||||||| |||||||||||||    
T  22782349 ttagttaaaaaatagagtcaaagtaagctatgtgaatagtgcacattaaaaaattgcgacatgtagtttgaaacggagg 22782271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 105
Target Start/End: Complemental strand, 27010503 - 27010473
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtat 105  Q
    |||||||||||||||||||||||||||||||    
T  27010503 ttggacatgtattttgaaacggagggagtat 27010473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 106
Target Start/End: Original strand, 38806354 - 38806384
Alignment:
Q  76 tggacatgtattttgaaacggagggagtatt 106  Q
    |||||||||||||||||||||||||||||||    
T  38806354 tggacatgtattttgaaacggagggagtatt 38806384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 42049858 - 42049784
Alignment:
Q  27 aaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggga 101  Q
    ||||| ||| ||||||||| |||| || ||| ||||||||||||||| |  | ||||||||||| ||||||||||    
T  42049858 aaaaaatatagtcaaagtatgtcatgtaaattgtgcacattgcaaaaatgcggcatgtattttggaacggaggga 42049784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 215
Target Start/End: Original strand, 48950537 - 48950615
Alignment:
Q  137 gagttgagatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaata 215  Q
    |||||||||||||||||||||| | |  |||| |||||  | ||||| ||||||||| | ||||||||||| |||||||    
T  48950537 gagttgagatcctctccatttaaactcttctctatttcatccatttacaaagataaaaatacaaaaaatcttgaaaata 48950615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 198883 - 198850
Alignment:
Q  76 tggacatgtattttgaaacggagggagtattaaa 109  Q
    ||||||||||||||||||||||||||||| ||||    
T  198883 tggacatgtattttgaaacggagggagtaataaa 198850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 6910567 - 6910596
Alignment:
Q  75 ttggacatgtattttgaaacggagggagta 104  Q
    ||||||||||||||||||||||||||||||    
T  6910567 ttggacatgtattttgaaacggagggagta 6910596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Complemental strand, 12094610 - 12094581
Alignment:
Q  76 tggacatgtattttgaaacggagggagtat 105  Q
    ||||||||||||||||||||||||||||||    
T  12094610 tggacatgtattttgaaacggagggagtat 12094581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 13499364 - 13499331
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtattaa 108  Q
    ||||||||||||||||||| ||||||||||||||    
T  13499364 ttggacatgtattttgaaatggagggagtattaa 13499331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Original strand, 19241917 - 19241946
Alignment:
Q  76 tggacatgtattttgaaacggagggagtat 105  Q
    ||||||||||||||||||||||||||||||    
T  19241917 tggacatgtattttgaaacggagggagtat 19241946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 20765429 - 20765458
Alignment:
Q  75 ttggacatgtattttgaaacggagggagta 104  Q
    ||||||||||||||||||||||||||||||    
T  20765429 ttggacatgtattttgaaacggagggagta 20765458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Complemental strand, 29375166 - 29375137
Alignment:
Q  76 tggacatgtattttgaaacggagggagtat 105  Q
    ||||||||||||||||||||||||||||||    
T  29375166 tggacatgtattttgaaacggagggagtat 29375137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 34373703 - 34373638
Alignment:
Q  177 caatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggac 242  Q
    |||||| || ||||||||| ||||||||||| ||||| |||| |  ||||||||||||| ||||||    
T  34373703 caatttggagagataaagagacaaaaaatcttgaaaaaagtaaaatataattaatgatggtgggac 34373638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 34373788 - 34373853
Alignment:
Q  177 caatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggac 242  Q
    |||||| || ||||||||||||| ||||||| ||||| |||| |  ||||||||||||| ||||||    
T  34373788 caatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggac 34373853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Complemental strand, 42761512 - 42761483
Alignment:
Q  75 ttggacatgtattttgaaacggagggagta 104  Q
    ||||||||||||||||||||||||||||||    
T  42761512 ttggacatgtattttgaaacggagggagta 42761483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 43093026 - 43092981
Alignment:
Q  188 gataaagacacaaaaaatctcgaaaatagtatacaataattaatga 233  Q
    |||||||||||||||| | | ||||| |||||||||||||||||||    
T  43093026 gataaagacacaaaaatttttgaaaagagtatacaataattaatga 43092981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3430433 - 3430521
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtatttt 89  Q
    ||||||||| ||||  || |||||||||||| ||| |||||||||||| |  | |||||||||||||| |||| |   |||||||||||    
T  3430433 ctaatatttttattaatatattagttaaaaaatatggtcaaagtaagttatataaatagtgcacattgtaaaattgcaacatgtatttt 3430521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 27033608 - 27033672
Alignment:
Q  177 caatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatggga 241  Q
    |||||| || ||||||||||||| ||||||| ||||| |||| |  ||||||||||||| |||||    
T  27033608 caatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtggga 27033672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 27813447 - 27813511
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcaca 65  Q
    |||| |||||||||| || |||||||||||| ||| |||||| ||||  | ||||||||||||||    
T  27813447 ctaacatttgtatttatatattagttaaaaaatatagtcaaaataagctatgtgaatagtgcaca 27813511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Complemental strand, 36881310 - 36881282
Alignment:
Q  76 tggacatgtattttgaaacggagggagta 104  Q
    |||||||||||||||||||||||||||||    
T  36881310 tggacatgtattttgaaacggagggagta 36881282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 2e-46; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 16778608 - 16778502
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16778608 ctaatatttgtatttatacattagttaaaaattatggtcaaagtaagccaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 16778509  T
Q  101 agtatta 107  Q
    |||||||    
T  16778508 agtatta 16778502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 47156130 - 47156021
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  47156130 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 47156031  T
Q  101 agtattaaaa 110  Q
    |||| |||||    
T  47156030 agtaataaaa 47156021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 28061674 - 28061778
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28061674 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 28061773  T
Q  101 agtat 105  Q
    |||||    
T  28061774 agtat 28061778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 36623411 - 36623308
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36623411 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 36623312  T
Q  101 agta 104  Q
    ||||    
T  36623311 agta 36623308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 38852006 - 38852110
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  38852006 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattggaaaaattggacatgtattttgaaacggaggg 38852105  T
Q  101 agtat 105  Q
    |||||    
T  38852106 agtat 38852110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 41898091 - 41897987
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| |||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  41898091 ctaatatttgtatttatatattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 41897992  T
Q  101 agtat 105  Q
    |||||    
T  41897991 agtat 41897987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 20885206 - 20885103
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||    
T  20885206 ctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtccacattgtaaaaattggacatgtattttgaaacggaggg 20885107  T
Q  101 agta 104  Q
    ||||    
T  20885106 agta 20885103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 40256160 - 40256063
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggag 98  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  40256160 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagagcacattgcaaaaattggacatgtattttgaaacggag 40256063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 32431517 - 32431620
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||| || ||||| |||||||||||||||||    
T  32431517 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaatttgacatatattttgaaacggaggg 32431616  T
Q  101 agta 104  Q
    ||||    
T  32431617 agta 32431620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 46322127 - 46322227
Alignment:
Q  4 atatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagt 103  Q
    |||||||||||  ||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||    
T  46322127 atatttgtattgatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttgaaatggagggagt 46322226  T
Q  104 a 104  Q
    |    
T  46322227 a 46322227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 7457881 - 7457983
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||| ||    
T  7457881 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagt-aagtgaatagtgcacattgcaaaacttagacatgtattttgaaacggatgg 7457979  T
Q  101 agta 104  Q
    ||||    
T  7457980 agta 7457983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 40090077 - 40090180
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| |||||||||||||||||||||||||||||||| |||| |||||||| |||||| ||||||||||    
T  40090077 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgaaaaaattggacatatattttaaaacggaggg 40090176  T
Q  101 agta 104  Q
    ||||    
T  40090177 agta 40090180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 42890502 - 42890605
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| |||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  42890502 ctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaaatgaatagtgcacattgcaaaaattggacatgtattttgaaacggatgg 42890601  T
Q  101 agta 104  Q
    ||||    
T  42890602 agta 42890605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 48602539 - 48602436
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||| |||||||||||||||| |||| |||| |||||||||||||||||||||    
T  48602539 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattggaaaaattgggcatgtattttgaaacggaggg 48602440  T
Q  101 agta 104  Q
    ||||    
T  48602439 agta 48602436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 25566707 - 25566811
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||  ||||||||||| ||| ||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |    
T  25566707 ctaatatttgtatta-tacattagttagaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtattttgaaacggagag 25566805  T
Q  101 agtatt 106  Q
    ||||||    
T  25566806 agtatt 25566811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 36585212 - 36585109
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| |||||||||| |||| ||| || ||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||     
T  36585212 ctaatatttgtatttatacattagtttaaaagtatggtaaaaataagtcaagtgaatagtgcacattgcaaaaattggatatgtattttgaaacggagga 36585113  T
Q  101 agta 104  Q
    ||||    
T  36585112 agta 36585109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 42877489 - 42877386
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||| ||||| ||||||||||||||| ||| |||||||||||| || | ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  42877489 ctaatatttttatttatacattagttaaaaagtatggtcaaagtaagttaaattaatagtgcacattacaaaatttggacatgtattttgaaacggaggg 42877390  T
Q  101 agta 104  Q
    ||||    
T  42877389 agta 42877386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 44732115 - 44732010
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||| | || |    
T  44732115 ctaatatttgtatttatacattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtattttaaaatgaagtg 44732016  T
Q  101 agtatt 106  Q
    ||||||    
T  44732015 agtatt 44732010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 8683921 - 8683818
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| |||||||||||||||||||||| |||||||| ||||| ||||||||||||||| ||||| | ||    
T  8683921 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacatttcaaaaattggacatgtattttaaaacgaatgg 8683822  T
Q  101 agta 104  Q
    ||||    
T  8683821 agta 8683818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 39130085 - 39130188
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||| ||  | ||||||||| ||||||| ||    
T  39130085 ctaatatttgtatttatacattagttaaaaaatatggtcaaagaaagtcaagtgaatagtgcacattgcaaaaattaaagatgtattttaaaacggatgg 39130184  T
Q  101 agta 104  Q
    ||||    
T  39130185 agta 39130188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 7439006 - 7438908
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagg 99  Q
    ||||||||||||||| ||||||||||||||| ||| |||||| ||||||||||||||| |||| ||||||||| || ||||||||||||||||| ||||    
T  7439006 ctaatatttgtatttatacattagttaaaaagtatggtcaaaataagtcaagtgaataatgcatattgcaaaaattagacatgtattttgaaacagagg 7438908  T

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Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 46479932 - 46479838
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacg 95  Q
    ||||||||||||||| ||||||||||||||||| | |||||||||||||||| ||||||||||||||| |||| ||  |||||||||||||||||    
T  46479932 ctaatatttgtatttatacattagttaaaaattttggtcaaagtaagtcaagcgaatagtgcacattgtaaaaattaaacatgtattttgaaacg 46479838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 3851176 - 3851084
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacgga 97  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||   |||||||||||||| |||||||| |||||||| |||||    
T  3851176 taatatttgtatttatacattagttaaaaagtattgtcaaagtaagtcaagtgaa---tgcacattgcaaaaattggacatatattttgagacgga 3851084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 6174939 - 6174843
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacgga 97  Q
    ||||| ||||||||| ||||||||||||||| ||| |||| |||||||||| |||||||||||| |||||||| |||||||| ||||||||||||||    
T  6174939 ctaatgtttgtatttatacattagttaaaaaatatggtcacagtaagtcaaatgaatagtgcaccttgcaaaaattggacatatattttgaaacgga 6174843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 30342177 - 30342081
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacgga 97  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||| ||||||||||| |||||||||||||| |||  |||||||||| |||||||    
T  30342177 ctaatatttgtatttatacattagttaaaaagtatagtcaaagtaaatcaagtgaataatgcacattgcaaaaattgatcatgtattttaaaacgga 30342081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 35117228 - 35117125
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||| ||||| |||||||||||||| | || ||||||||||||||||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||    
T  35117228 ctaatatttatatttatacattagttaaaagt-atggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattgaacaggtattttaaaacggaggg 35117130  T
Q  101 agtat 105  Q
    |||||    
T  35117129 agtat 35117125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 41088689 - 41088587
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggga 101  Q
    ||||||||| |||| ||||||||||||||| ||| ||||||||||||||  |||| |||||| |||| |||| ||||||||||||||||||| |||||||    
T  41088689 taatatttgcatttatacattagttaaaaaatatggtcaaagtaagtcagatgaacagtgcatattgtaaaatttggacatgtattttgaaatggaggga 41088590  T
Q  102 gta 104  Q
    |||    
T  41088589 gta 41088587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 11502739 - 11502832
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaac 94  Q
    ||||||||||||||| ||||||||||||||| |||  ||||||||||| |||| |||| |||||||| ||||| ||||||||||||||||||||    
T  11502739 ctaatatttgtatttatacattagttaaaaagtatgatcaaagtaagttaagtcaataatgcacattacaaaaattggacatgtattttgaaac 11502832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 249
Target Start/End: Original strand, 40019605 - 40019710
Alignment:
Q  143 agatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggac 242  Q
    ||||||||||| ||||||||| ||||||||||| | |||| || ||||||| ||||||||||||| ||||| |||||| | |||||||||||| ||||||    
T  40019605 agatcctctcc-tttacaattgtctcaatttcctccatttggagagataaaaacacaaaaaatcttgaaaaaagtataaagtaattaatgatggtgggac 40019703  T
Q  243 tcattta 249  Q
    |||||||    
T  40019704 tcattta 40019710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 46103529 - 46103625
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||       ||||||| |||| ||||||||||||||||||||||||||    
T  46103529 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtg-------cacattgtaaaaattggacatgtattttgaaacggaggg 46103621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 6766709 - 6766814
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||| ||||| |||| ||||||||||||||| ||| |||||| ||||| | ||||||| |||| |||| |||| |  |||||||||||||||||||||||    
T  6766709 ctaacatttgcatttatacattagttaaaaaatatggtcaaaataagttatgtgaataatgcagattgtaaaattgcgacatgtattttgaaacggaggg 6766808  T
Q  101 agtatt 106  Q
    ||||||    
T  6766809 agtatt 6766814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 7169228 - 7169133
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacgga 97  Q
    |||||||||||||| || |||||||||||| ||| |||||||||| ||| |||||||   |||||||||||| |  ||||||||||||||||||||    
T  7169228 taatatttgtatttatatattagttaaaaaatatagtcaaagtaaatcatgtgaatatgacacattgcaaaattatgacatgtattttgaaacgga 7169133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 41134647 - 41134745
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| |||||||||||     ||| ||||||||||||||| |||||||| ||||||| |||| ||| ||||||||||| ||||||| ||    
T  41134647 ctaatatttgtatttatacattagtta-----tatggtcaaagtaagtcaaatgaatagtacacattgtaaaaattgaacatgtattttaaaacggatgg 41134741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 2198704 - 2198601
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggga 101  Q
    |||||||||||||| ||||||||||||||| |||  ||||| ||| |||  |||||||| |||||||||||  ||  |||| |||||| |||||||||||    
T  2198704 taatatttgtatttatacattagttaaaaagtatgttcaaaataaatcagatgaatagtacacattgcaaatattacacatctattttaaaacggaggga 2198605  T
Q  102 gtat 105  Q
    ||||    
T  2198604 gtat 2198601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 36341703 - 36341620
Alignment:
Q  21 ttagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagta 104  Q
    ||||||||||| ||| || ||| ||||||| |||||||||||||||||||||| |  |||||||||||||||||| | ||||||    
T  36341703 ttagttaaaaagtatcgttaaattaagtcatgtgaatagtgcacattgcaaaaatgcgacatgtattttgaaacgaatggagta 36341620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 5788536 - 5788629
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaac 94  Q
    ||||||||||||||| ||||||||| ||||| |||  | |||||||||||| |||||||||| |||  ||||| || |||||||||||| ||||    
T  5788536 ctaatatttgtatttatacattagtaaaaaagtatgattaaagtaagtcaattgaatagtgctcatcacaaaaattagacatgtatttttaaac 5788629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 42662284 - 42662185
Alignment:
Q  6 atttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagtat 105  Q
    |||||||||| || |||||||||||| ||| |||||||||||  | ||||||| | |||||||||||| |  |||||||||||||||||||| | |||||    
T  42662284 atttgtatttatatattagttaaaaagtatggtcaaagtaaga-atgtgaataatacacattgcaaaattgcgacatgtattttgaaacggaagaagtat 42662186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 35570239 - 35570316
Alignment:
Q  27 aaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagta 104  Q
    ||||| ||| ||||||||||||   ||||||||||||||||| |||| |  ||||||||||||||||||||| |||||    
T  35570239 aaaaaatatggtcaaagtaagttttgtgaatagtgcacattgtaaaattgcgacatgtattttgaaacggagtgagta 35570316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 26161699 - 26161599
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || ||||||||||||  || |||||| ||| ||| ||||||||||| ||||  | || |  |||||||||||||||| ||||||    
T  26161699 ctaatatttgtatttatatattagttaaaaagcatggtcaaaataaatcatgtgaatagtgcgcattatacaaatgtgacatgtattttgaaatggaggg 26161600  T
Q  101 a 101  Q
    |    
T  26161599 a 26161599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 27045567 - 27045663
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacgga 97  Q
    |||| |||||||||| || |||||||||||| ||| ||||||||||  || |||||||||  |||||| |||| |   |||||||||||||||||||    
T  27045567 ctaacatttgtatttatatattagttaaaaaatatggtcaaagtaaaccatgtgaatagtatacattgtaaaattgcaacatgtattttgaaacgga 27045663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 4131668 - 4131758
Alignment:
Q  7 tttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacgga 97  Q
    ||||||||| || |||||||||||| ||| || ||||||||| | |||||||||  |||||| |||| |  ||||| ||||||||||||||    
T  4131668 tttgtatttatatattagttaaaaaatatggttaaagtaagttatgtgaatagtatacattgtaaaattgcgacatatattttgaaacgga 4131758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 25566577 - 25566543
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtattaaa 109  Q
    |||||||||||||||||||||||||||||||||||    
T  25566577 ttggacatgtattttgaaacggagggagtattaaa 25566543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 45331992 - 45331915
Alignment:
Q  24 gttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagta 104  Q
    |||||||| ||| ||||||||||||||  |||||| |||| ||||||||| |   |||||| |||||||||||||||||||    
T  45331992 gttaaaaaatatggtcaaagtaagtcatatgaataatgcatattgcaaaaat---acatgtgttttgaaacggagggagta 45331915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 49110634 - 49110732
Alignment:
Q  6 atttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagta 104  Q
    |||||||||  || |||||||||||| ||| |||||||||| |||  |||||||| ||||||  |||| |  |||||||||||| ||||||| ||||||    
T  49110634 atttgtattaatatattagttaaaaaatatggtcaaagtaaatcatttgaatagtacacattataaaattgtgacatgtattttaaaacggatggagta 49110732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 5529114 - 5529018
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacgga 97  Q
    |||| |||| ||||| || |||||||||||| ||| |||||| |||   | || ||||||| |||||| |||| | |||||||||||||||||||||    
T  5529114 ctaacatttttatttgtatattagttaaaaaatatagtcaaaataatctacgtaaatagtgtacattgtaaaattaggacatgtattttgaaacgga 5529018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 25060158 - 25060190
Alignment:
Q  76 tggacatgtattttgaaacggagggagtattaa 108  Q
    |||||||||||||||||||||||||||||||||    
T  25060158 tggacatgtattttgaaacggagggagtattaa 25060190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 28061544 - 28061512
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtatta 107  Q
    |||||||||||||||||||||||||||||||||    
T  28061544 ttggacatgtattttgaaacggagggagtatta 28061512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 41898221 - 41898253
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtatta 107  Q
    |||||||||||||||||||||||||||||||||    
T  41898221 ttggacatgtattttgaaacggagggagtatta 41898253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 47156260 - 47156292
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtatta 107  Q
    |||||||||||||||||||||||||||||||||    
T  47156260 ttggacatgtattttgaaacggagggagtatta 47156292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 3785623 - 3785520
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||| |||||||||| || |||||||||||| ||| ||||||||||   |  ||||||||||| ||||  ||| |  || |||||||||||||||||||     
T  3785623 ctaacatttgtatttatatattagttaaaaaatatggtcaaagtaaactatatgaatagtgcatattgtgaaattatgatatgtattttgaaacggagga 3785524  T
Q  101 agta 104  Q
    ||||    
T  3785523 agta 3785520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 107
Target Start/End: Complemental strand, 27813839 - 27813808
Alignment:
Q  76 tggacatgtattttgaaacggagggagtatta 107  Q
    ||||||||||||||||||||||||||||||||    
T  27813839 tggacatgtattttgaaacggagggagtatta 27813808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Complemental strand, 10981536 - 10981507
Alignment:
Q  76 tggacatgtattttgaaacggagggagtat 105  Q
    ||||||||||||||||||||||||||||||    
T  10981536 tggacatgtattttgaaacggagggagtat 10981507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 21151109 - 21151174
Alignment:
Q  177 caatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggac 242  Q
    |||||| || ||||||||||||| ||||||| ||||| |||| |  ||||||||||||| ||||||    
T  21151109 caatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggac 21151174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 36623541 - 36623570
Alignment:
Q  75 ttggacatgtattttgaaacggagggagta 104  Q
    ||||||||||||||||||||||||||||||    
T  36623541 ttggacatgtattttgaaacggagggagta 36623570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Complemental strand, 46103399 - 46103370
Alignment:
Q  75 ttggacatgtattttgaaacggagggagta 104  Q
    ||||||||||||||||||||||||||||||    
T  46103399 ttggacatgtattttgaaacggagggagta 46103370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 4705432 - 4705380
Alignment:
Q  210 aaaatagtatacaataattaatgatgatgggactcatttattgaaagcattca 262  Q
    |||| ||||||||||| ||||||||| ||| ||| ||||||| ||||||||||    
T  4705432 aaaagagtatacaatagttaatgatggtggaacttatttattaaaagcattca 4705380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 249
Target Start/End: Original strand, 7362525 - 7362597
Alignment:
Q  177 caatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggactcattta 249  Q
    |||||| || ||||||||||||| ||||||| ||||| |||| |  ||||||||||||| ||| || ||||||    
T  7362525 caatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaacccattta 7362597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 23707582 - 23707614
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaatt 33  Q
    ||||||||||||||| |||||||||||||||||    
T  23707582 ctaatatttgtatttatacattagttaaaaatt 23707614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 45260545 - 45260481
Alignment:
Q  177 caatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatggga 241  Q
    |||||| || ||||||||||||| |||||||  |||| |||| |  |||||||||||||||||||    
T  45260545 caatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatgatggga 45260481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 103
Target Start/End: Original strand, 48602669 - 48602697
Alignment:
Q  75 ttggacatgtattttgaaacggagggagt 103  Q
    |||||||||||||||||||||||||||||    
T  48602669 ttggacatgtattttgaaacggagggagt 48602697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 100806 - 100910
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  100806 ctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtcaagtgaatagtgcacattgcaaaagttgaacatgtattttgaaacggaggg 100905  T
Q  101 agtat 105  Q
    |||||    
T  100906 agtat 100910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Complemental strand, 100676 - 100647
Alignment:
Q  75 ttggacatgtattttgaaacggagggagta 104  Q
    ||||||||||||||||||||||||||||||    
T  100676 ttggacatgtattttgaaacggagggagta 100647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 4e-44; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 32671919 - 32671813
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32671919 ctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 32671820  T
Q  101 agtatta 107  Q
    |||||||    
T  32671819 agtatta 32671813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 4148034 - 4147928
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  4148034 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttgaaacggaggg 4147935  T
Q  101 agtatta 107  Q
    |||||||    
T  4147934 agtatta 4147928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 18668847 - 18668951
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18668847 ctaatatttgtatttatacattagttaaaaaatatggtcaaagcaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 18668946  T
Q  101 agtat 105  Q
    |||||    
T  18668947 agtat 18668951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 32414838 - 32414946
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  32414838 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgaaaaaattggacatgtattttgaaacggaggg 32414937  T
Q  101 agtattaaa 109  Q
    |||||||||    
T  32414938 agtattaaa 32414946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 19088117 - 19088221
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| | | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19088117 ctaatatttgtatttatatattagttaaaaagtttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 19088216  T
Q  101 agtat 105  Q
    |||||    
T  19088217 agtat 19088221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 22054875 - 22054772
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |    
T  22054875 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattggacatgtattttgaaacggagag 22054776  T
Q  101 agta 104  Q
    ||||    
T  22054775 agta 22054772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 24624100 - 24624203
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  24624100 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtattttgaaacggaggg 24624199  T
Q  101 agta 104  Q
    ||||    
T  24624200 agta 24624203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 17213943 - 17214051
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||| || |||||||||||||||| ||||||    
T  17213943 ctaatatttgtatttataaattagttaaaaagtatagtcaaagtaagtcaaatgaatagtgcacattgcaaaaattagacatgtattttgaaatggaggg 17214042  T
Q  101 agtattaaa 109  Q
    |||||||||    
T  17214043 agtattaaa 17214051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 6563329 - 6563226
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  6563329 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaattgaacatgtattttgaaacggaggg 6563230  T
Q  101 agta 104  Q
    ||||    
T  6563229 agta 6563226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 20226457 - 20226564
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||  ||||    
T  20226457 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattgtacatgtattttgaaacataggg 20226556  T
Q  101 agtattaa 108  Q
    ||||||||    
T  20226557 agtattaa 20226564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 22120441 - 22120548
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||  ||||    
T  22120441 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattgtacatgtattttgaaacataggg 22120540  T
Q  101 agtattaa 108  Q
    ||||||||    
T  22120541 agtattaa 22120548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 17257810 - 17257915
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| || ||    
T  17257810 ctaatatttgtatttgtacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattagacatgtattttgaaacagatgg 17257909  T
Q  101 agtatt 106  Q
    ||||||    
T  17257910 agtatt 17257915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 25475977 - 25476075
Alignment:
Q  11 tatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagtattaaa 109  Q
    ||||| ||||||||||||||| ||  |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  25475977 tatttatacattagttaaaaagtaaggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttgaaacggagggagtaataaa 25476075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 31569185 - 31569280
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacgg 96  Q
    ||||||||||||||| ||||||| | ||||| ||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  31569185 ctaatatttgtatttatacattaataaaaaagtatagtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttgaaacgg 31569280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 3989423 - 3989518
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacgga 97  Q
    |||||| ||||||||  |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  3989423 ctaatagttgtattta-acattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgtaacgga 3989518  T

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Target: chr6; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 15383089 - 15383185
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacgga 97  Q
    ||||||||||||||| || |||||||||||| ||| || |||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||    
T  15383089 ctaatatttgtatttatagattagttaaaaagtatggttaaagtaagtcaaatgaataatgcacattgcaaaaattggacatgtattttgaaacgga 15383185  T

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Target: chr6; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 20437175 - 20437279
Alignment:
Q  4 atatttgtatttctacattagttaaaaat-tattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggag 102  Q
    |||||||||||| |||||||||||||||  |||  |||||||||||||||||||||||||||||||||||| || |||||||||||  ||||||| ||||    
T  20437175 atatttgtatttatacattagttaaaaaaatatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtatttgaaaacggatggag 20437274  T
Q  103 tatta 107  Q
    |||||    
T  20437275 tatta 20437279  T

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Target: chr6; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 28477856 - 28477764
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaa 93  Q
    ||||||||||||||| || |||||||||||||||| ||||||| |||||| ||||||||| |||||||||||| |  ||||||||||||||||    
T  28477856 ctaatatttgtatttatatattagttaaaaattatggtcaaagcaagtcatgtgaatagtacacattgcaaaattgtgacatgtattttgaaa 28477764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 29790309 - 29790205
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||||||| ||| |||||||||| |||||||||  ||||||||||| |  ||||||||||||||||| || ||    
T  29790309 ctaatatttgtatttatatattagttaaaaattatggtccaagtaagtcatgtgaatagtatacattgcaaaattgcgacatgtattttgaaacagatgg 29790210  T
Q  101 agtat 105  Q
    |||||    
T  29790209 agtat 29790205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 1040926 - 1040855
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaa 73  Q
    |||||||||||||| ||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||    
T  1040926 taatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgcaaaa 1040855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 10520570 - 10520468
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggga 101  Q
    |||||| ||||||| |||||||||||| |  ||| ||||||||||||||| |||||| | |||||||||||| ||| ||||||||||||||||||| |||    
T  10520570 taatatctgtatttatacattagttaataggtatggtcaaagtaagtcaaatgaataatacacattgcaaaaattgaacatgtattttgaaacggaagga 10520471  T
Q  102 gta 104  Q
    |||    
T  10520470 gta 10520468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 29693982 - 29693894
Alignment:
Q  5 tatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaa 93  Q
    ||||||||||| || |||||||||||||||| ||||||| |||||| ||||||||| |||||||||||| |  ||||||||||||||||    
T  29693982 tatttgtatttatatattagttaaaaattatggtcaaagcaagtcatgtgaatagtacacattgcaaaattgtgacatgtattttgaaa 29693894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 21540789 - 21540880
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaa 93  Q
    |||||||||||||| || | ||||| |||| ||| ||||||||||||||| |||||||||||||||| |||| ||  |||||||||||||||    
T  21540789 taatatttgtatttataaactagtttaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaattaaacatgtattttgaaa 21540880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 15337591 - 15337484
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| |||||||||||| | ||||||| |||| |||| |||| |  || |||||||||||||| || |     
T  15337591 ctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaataatgcatattgtaaaattgtgaaatgtattttgaaacagatga 15337492  T
Q  101 agtattaa 108  Q
    ||||||||    
T  15337491 agtattaa 15337484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 24955555 - 24955654
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| | ||||||||||||| |||  ||||| ||||||||||||||| |||||||| ||||| || |      ||||||||||||||||    
T  24955555 ctaatatttgtatttattcattagttaaaaaatatgatcaaaataagtcaagtgaataatgcacattacaaaaattag------attttgaaacggaggg 24955648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 255
Target Start/End: Original strand, 236071 - 236183
Alignment:
Q  144 gatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaa--atctcgaaaatagtatacaataattaatgatgatggga 241  Q
    ||||||||||||||||||||||||  |||| |   ||||  ||||||||| | |||||||  |||  ||||| ||||||||||| ||||||||| |||||    
T  236071 gatcctctccatttacaattctcttcattttcttcatttgaaaagataaacaaacaaaaagaatcctgaaaa-agtatacaatagttaatgatggtggga 236169  T
Q  242 ctcatttattgaaa 255  Q
    ||||||||||||||    
T  236170 ctcatttattgaaa 236183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 16193052 - 16193101
Alignment:
Q  56 atagtgcacattgcaaaagttggacatgtattttgaaacggagggagtat 105  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||||||||    
T  16193052 atagtgcacattgcaaaaattggacatgtattttaaaatggagggagtat 16193101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 18668717 - 18668681
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtattaaaat 111  Q
    |||||||||||||||||||||||||||||||||||||    
T  18668717 ttggacatgtattttgaaacggagggagtattaaaat 18668681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 1249298 - 1249199
Alignment:
Q  143 agatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggac 242  Q
    ||||||||||||||||    | |||| |||||  |||||| |||||||||||||||| ||||||| ||||| |||| |  ||||||||||||| ||||||    
T  1249298 agatcctctccatttatgtgtttctccatttcttcaatttggaaagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggac 1249199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 109
Target Start/End: Original strand, 32420748 - 32420787
Alignment:
Q  70 aaaagttggacatgtattttgaaacggagggagtattaaa 109  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  32420748 aaaaattggacatgtattttgaaacggagggagtattaaa 32420787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 19240753 - 19240823
Alignment:
Q  3 aatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaa 73  Q
    ||||||||||||| || |||||||||||| ||| |||||| ||||| | |||||||||  |||||||||||    
T  19240753 aatatttgtatttatatattagttaaaaaatatggtcaaaataagttatgtgaatagtatacattgcaaaa 19240823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 31869811 - 31869714
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggag 98  Q
    |||| |||||||||| || ||||||||||||  || |||||||||| | | | |||||||| |||||| ||||    |||||||||||||||||||||    
T  31869811 ctaacatttgtatttatatattagttaaaaaaaatggtcaaagtaaattatgggaatagtgtacattgtaaaatcgcgacatgtattttgaaacggag 31869714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 12226078 - 12225986
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaa 93  Q
    ||||||||| ||||| ||||||||||||||| |||  ||||| |||||| ||||||||| || |||   |||| || || |||||||||||||    
T  12226078 ctaatatttatatttatacattagttaaaaagtatgatcaaaataagtccagtgaatagcgcgcatcataaaaattagatatgtattttgaaa 12225986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 109
Target Start/End: Original strand, 19996742 - 19996773
Alignment:
Q  78 gacatgtattttgaaacggagggagtattaaa 109  Q
    ||||||||||||||||||||||||||||||||    
T  19996742 gacatgtattttgaaacggagggagtattaaa 19996773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 4440953 - 4440851
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||| |||||||||| ||  |||  |||||| ||| |||||||||||| |  ||||||||||||||| ||||| |   |||| ||||||||||||||| |    
T  4440953 ctaacatttgtatttatatgttacctaaaaagtatggtcaaagtaagttatatgaatagtgcacattacaaaaatgcaacatatattttgaaacggagag 4440854  T
Q  101 agt 103  Q
    |||    
T  4440853 agt 4440851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 4804372 - 4804470
Alignment:
Q  144 gatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggac 242  Q
    ||||||||||||||| |  | |||| |||||  |||||| || ||||||||||||| ||||| | ||||| |||| |  ||||||||||||| ||||||    
T  4804372 gatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggac 4804470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 7162008 - 7162106
Alignment:
Q  144 gatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggac 242  Q
    ||||||||| ||||||   | |||| |||||  |||||| || ||||||||||||| ||||||| ||||| |||| |  ||||||||||||| ||||||    
T  7162008 gatcctctctatttacgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggac 7162106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 106
Target Start/End: Original strand, 15064943 - 15064973
Alignment:
Q  76 tggacatgtattttgaaacggagggagtatt 106  Q
    |||||||||||||||||||||||||||||||    
T  15064943 tggacatgtattttgaaacggagggagtatt 15064973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 105
Target Start/End: Complemental strand, 19087987 - 19087957
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtat 105  Q
    |||||||||||||||||||||||||||||||    
T  19087987 ttggacatgtattttgaaacggagggagtat 19087957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 105
Target Start/End: Complemental strand, 20437046 - 20437016
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtat 105  Q
    |||||||||||||||||||||||||||||||    
T  20437046 ttggacatgtattttgaaacggagggagtat 20437016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 105
Target Start/End: Complemental strand, 24623970 - 24623940
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtat 105  Q
    |||||||||||||||||||||||||||||||    
T  24623970 ttggacatgtattttgaaacggagggagtat 24623940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Complemental strand, 1605607 - 1605578
Alignment:
Q  76 tggacatgtattttgaaacggagggagtat 105  Q
    ||||||||||||||||||||||||||||||    
T  1605607 tggacatgtattttgaaacggagggagtat 1605578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Complemental strand, 7761329 - 7761300
Alignment:
Q  76 tggacatgtattttgaaacggagggagtat 105  Q
    ||||||||||||||||||||||||||||||    
T  7761329 tggacatgtattttgaaacggagggagtat 7761300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Complemental strand, 19996350 - 19996321
Alignment:
Q  76 tggacatgtattttgaaacggagggagtat 105  Q
    ||||||||||||||||||||||||||||||    
T  19996350 tggacatgtattttgaaacggagggagtat 19996321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 22055005 - 22055034
Alignment:
Q  75 ttggacatgtattttgaaacggagggagta 104  Q
    ||||||||||||||||||||||||||||||    
T  22055005 ttggacatgtattttgaaacggagggagta 22055034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Complemental strand, 29260220 - 29260191
Alignment:
Q  76 tggacatgtattttgaaacggagggagtat 105  Q
    ||||||||||||||||||||||||||||||    
T  29260220 tggacatgtattttgaaacggagggagtat 29260191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Complemental strand, 8626510 - 8626482
Alignment:
Q  76 tggacatgtattttgaaacggagggagta 104  Q
    |||||||||||||||||||||||||||||    
T  8626510 tggacatgtattttgaaacggagggagta 8626482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 2e-43; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 42587407 - 42587512
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42587407 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 42587506  T
Q  101 agtatt 106  Q
    ||||||    
T  42587507 agtatt 42587512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 623279 - 623171
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  623279 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 623180  T
Q  101 agtattaaa 109  Q
    |||||||||    
T  623179 agtattaaa 623171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 616886 - 616779
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  616886 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 616787  T
Q  101 agtattaa 108  Q
    ||||||||    
T  616786 agtattaa 616779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 32998553 - 32998448
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32998553 ctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 32998454  T
Q  101 agtatt 106  Q
     |||||    
T  32998453 tgtatt 32998448  T

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Target: chr8; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 14237383 - 14237280
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  14237383 ctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggagga 14237284  T
Q  101 agta 104  Q
    ||||    
T  14237283 agta 14237280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 18044528 - 18044425
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  18044528 ctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggatgg 18044429  T
Q  101 agta 104  Q
    ||||    
T  18044428 agta 18044425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 3100654 - 3100754
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  3100654 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtaaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 3100753  T
Q  101 a 101  Q
    |    
T  3100754 a 3100754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 132120 - 132017
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||    
T  132120 ctaatatttgtatttatacattagttaaaaaatatgatcaaagtaagtcaagtgaatagtgcacgttgcaaaaagtggacatgtattttgaaacggaggg 132021  T
Q  101 agta 104  Q
    ||||    
T  132020 agta 132017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 5878419 - 5878317
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||    
T  5878419 ctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaa-atggacatgtatttggaaacggaggg 5878321  T
Q  101 agta 104  Q
    ||||    
T  5878320 agta 5878317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 8394449 - 8394346
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||||||||||| || ||||||||||||||| | | ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  8394449 ctaatatttgtacttatacattagttaaaaaatttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtattttgaaacggaggg 8394350  T
Q  101 agta 104  Q
    ||||    
T  8394349 agta 8394346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 40494487 - 40494384
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |    
T  40494487 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattggaaaaattggacatgtattttgaaacggagag 40494388  T
Q  101 agta 104  Q
    ||||    
T  40494387 agta 40494384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 41263913 - 41263810
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||| |    
T  41263913 ctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggatatgtattttgaaatggagag 41263814  T
Q  101 agta 104  Q
    ||||    
T  41263813 agta 41263810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 24524202 - 24524100
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggga 101  Q
    |||||||||||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||| |||    
T  24524202 taatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaatttgaacatgtattttgaaacggaagga 24524103  T
Q  102 gta 104  Q
    |||    
T  24524102 gta 24524100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 35403618 - 35403512
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggga 101  Q
    |||||| ||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| | |    
T  35403618 taatatctgtatttatacattagttaaaaagtatggtcaaagtatgtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggatgaa 35403519  T
Q  102 gtattaa 108  Q
    |||||||    
T  35403518 gtattaa 35403512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 4270252 - 4270349
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagg 99  Q
    |||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||    
T  4270252 taatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatgtattttaaaacggagg 4270349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 22489433 - 22489539
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| || |||||| ||||| ||||||| ||    
T  22489433 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgcattttaaaacggatgg 22489532  T
Q  101 agtatta 107  Q
    | |||||    
T  22489533 aatatta 22489539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 2766207 - 2766304
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggag 98  Q
    ||||||||| ||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  2766207 ctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaattggatatgtattttgaaacggag 2766304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 13216880 - 13216972
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaa 93  Q
    ||||||||| ||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  13216880 ctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtattttgaaa 13216972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 36642017 - 36642121
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattg-tcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagg 99  Q
    ||||||||||||||| || || ||||||||| || || |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  36642017 ctaatatttgtatttatatataagttaaaaagtaatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtattttgaaacggagg 36642116  T
Q  100 gagta 104  Q
    |||||    
T  36642117 gagta 36642121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 38957273 - 38957177
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacgga 97  Q
    ||||||||||||||| ||| ||||||||||| ||| |||||||||| |||||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  38957273 ctaatatttgtatttatacgttagttaaaaaatatggtcaaagtaaatcaagttaatagtgcacattgcaaaaattggacatatattttgaaacgga 38957177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 36167179 - 36167075
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||| ||||| |||  ||||||||||||||||||||||| |||||||||||| |   ||||||||||| ||||||||||    
T  36167179 ctaatatttgtatttatacattagtgaaaaagtataatcaaagtaagtcaagtgaatagtacacattgcaaaaatgatacatgtattttaaaacggaggg 36167080  T
Q  101 agtat 105  Q
    |||||    
T  36167079 agtat 36167075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 105
Target Start/End: Original strand, 13217219 - 13217284
Alignment:
Q  40 aaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagtat 105  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||    
T  13217219 aaagtaagtcaagtgaatagtgtacattgcaaaaattggacatgtattttgaaacggaaggagtat 13217284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 33700232 - 33700338
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttg-gacatgtattttgaaacggagg 99  Q
    |||| |||||||||| || |||||||||||| ||| |||||||||||  | ||||||||||| ||||| |||  ||| ||||||||||||||||||||||    
T  33700232 ctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagctatgtgaatagtgcgcattgtaaattttgcgacatgtattttgaaacggagg 33700331  T
Q  100 gagtatt 106  Q
    |||||||    
T  33700332 gagtatt 33700338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 11637885 - 11637792
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaac 94  Q
    |||||| |||||||| |||| |||||||||| ||  |||||| ||||||||||||||||||||||||| |||| ||||||||  ||||||||||    
T  11637885 ctaatacttgtatttatacactagttaaaaagtacggtcaaaataagtcaagtgaatagtgcacattgtaaaaattggacatacattttgaaac 11637792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 105
Target Start/End: Original strand, 6414130 - 6414228
Alignment:
Q  7 tttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagtat 105  Q
    |||| |||| || |||| ||||||| ||| |||||||||||||| |||||||||||||||||||||| |  ||||| |||||| ||||||| |||||||    
T  6414130 tttgcatttatatattatttaaaaagtatggtcaaagtaagtcatgtgaatagtgcacattgcaaaaatgtgacatttattttaaaacggatggagtat 6414228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 38497147 - 38497085
Alignment:
Q  40 aaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggag 102  Q
    ||||||||||||||||||||||||||||| |||| ||| |||| |||||| ||||||||||||    
T  38497147 aaagtaagtcaagtgaatagtgcacattgtaaaaattgaacatatattttaaaacggagggag 38497085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 13585955 - 13586053
Alignment:
Q  163 tctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggactcatttattgaaagcattc 261  Q
    |||||| |||||| | ||||  ||||||||||| |||| |||| | ||||| |||| |||||||||||||||| | | ||| |||||||||||||||||    
T  13585955 tctctccatttcctccatttgaaaagataaagatacaataaatttagaaaagagtacacaataattaatgatggtagaacttatttattgaaagcattc 13586053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 3370420 - 3370487
Alignment:
Q  6 atttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaa 73  Q
    |||||||||| || |||| ||||||| ||| |||||||||||||| ||||| ||| ||||||||||||    
T  3370420 atttgtatttatatattaattaaaaaatatggtcaaagtaagtcatgtgaacagtccacattgcaaaa 3370487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 617016 - 617048
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtatta 107  Q
    |||||||||||||||||||||||||||||||||    
T  617016 ttggacatgtattttgaaacggagggagtatta 617048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 623409 - 623441
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtatta 107  Q
    |||||||||||||||||||||||||||||||||    
T  623409 ttggacatgtattttgaaacggagggagtatta 623441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 44517769 - 44517697
Alignment:
Q  188 gataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggactcatttattgaaagcatt 260  Q
    |||| ||||||||||||||| |||||  |||||||||||||||||||  ||| || ||||| |||||| ||||    
T  44517769 gatatagacacaaaaaatcttgaaaagtgtatacaataattaatgattgtggaacccattttttgaaaacatt 44517697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 5173353 - 5173282
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaa 73  Q
    |||||||||||||| || |||||||||| | |||  ||||||||| |||  |||||||| ||||||||||||    
T  5173353 taatatttgtatttatatattagttaaataatatgatcaaagtaaatcatatgaatagtacacattgcaaaa 5173282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 2766077 - 2766043
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtattaaa 109  Q
    ||||||||||||||||||||||||| |||||||||    
T  2766077 ttggacatgtattttgaaacggaggaagtattaaa 2766043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 106
Target Start/End: Original strand, 40058552 - 40058582
Alignment:
Q  76 tggacatgtattttgaaacggagggagtatt 106  Q
    |||||||||||||||||||||||||||||||    
T  40058552 tggacatgtattttgaaacggagggagtatt 40058582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 105
Target Start/End: Original strand, 40494617 - 40494647
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtat 105  Q
    |||||||||||||||||||||||||||||||    
T  40494617 ttggacatgtattttgaaacggagggagtat 40494647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 5878549 - 5878582
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtattaa 108  Q
    ||||||||| ||||||||||||||||||||||||    
T  5878549 ttggacatgcattttgaaacggagggagtattaa 5878582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Original strand, 8697923 - 8697952
Alignment:
Q  76 tggacatgtattttgaaacggagggagtat 105  Q
    ||||||||||||||||||||||||||||||    
T  8697923 tggacatgtattttgaaacggagggagtat 8697952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 14237513 - 14237542
Alignment:
Q  75 ttggacatgtattttgaaacggagggagta 104  Q
    ||||||||||||||||||||||||||||||    
T  14237513 ttggacatgtattttgaaacggagggagta 14237542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 30426787 - 30426722
Alignment:
Q  177 caatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggac 242  Q
    |||||| || ||||||||||||| ||||||| ||||| |||| |  ||||||||||||| ||||||    
T  30426787 caatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggac 30426722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Original strand, 40918978 - 40919007
Alignment:
Q  76 tggacatgtattttgaaacggagggagtat 105  Q
    ||||||||||||||||||||||||||||||    
T  40918978 tggacatgtattttgaaacggagggagtat 40919007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Original strand, 41307986 - 41308015
Alignment:
Q  76 tggacatgtattttgaaacggagggagtat 105  Q
    ||||||||||||||||||||||||||||||    
T  41307986 tggacatgtattttgaaacggagggagtat 41308015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 2540180 - 2540212
Alignment:
Q  76 tggacatgtattttgaaacggagggagtattaa 108  Q
    |||||||||||||||||||||||| ||||||||    
T  2540180 tggacatgtattttgaaacggaggaagtattaa 2540212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 103
Target Start/End: Complemental strand, 3100520 - 3100492
Alignment:
Q  75 ttggacatgtattttgaaacggagggagt 103  Q
    |||||||||||||||||||||||||||||    
T  3100520 ttggacatgtattttgaaacggagggagt 3100492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Complemental strand, 3585479 - 3585451
Alignment:
Q  76 tggacatgtattttgaaacggagggagta 104  Q
    |||||||||||||||||||||||||||||    
T  3585479 tggacatgtattttgaaacggagggagta 3585451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 18090431 - 18090332
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||| |||| ||||| || |||||||||||| |||  ||||| |||||||  | |||||||||||||| |||| || |||||||| ||| ||||| ||||    
T  18090431 ctaacatttatatttatatattagttaaaaaatatgatcaaa-taagtcatataaatagtgcacattgaaaaaattcgacatgtaatttaaaacgaaggg 18090333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Complemental strand, 27035025 - 27034997
Alignment:
Q  76 tggacatgtattttgaaacggagggagta 104  Q
    |||||||||||||||||||||||||||||    
T  27035025 tggacatgtattttgaaacggagggagta 27034997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Complemental strand, 36068108 - 36068080
Alignment:
Q  76 tggacatgtattttgaaacggagggagta 104  Q
    |||||||||||||||||||||||||||||    
T  36068108 tggacatgtattttgaaacggagggagta 36068080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Complemental strand, 37345599 - 37345571
Alignment:
Q  76 tggacatgtattttgaaacggagggagta 104  Q
    |||||||||||||||||||||||||||||    
T  37345599 tggacatgtattttgaaacggagggagta 37345571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Original strand, 40486478 - 40486506
Alignment:
Q  76 tggacatgtattttgaaacggagggagta 104  Q
    |||||||||||||||||||||||||||||    
T  40486478 tggacatgtattttgaaacggagggagta 40486506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Original strand, 43275646 - 43275674
Alignment:
Q  76 tggacatgtattttgaaacggagggagta 104  Q
    |||||||||||||||||||||||||||||    
T  43275646 tggacatgtattttgaaacggagggagta 43275674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Original strand, 45278726 - 45278754
Alignment:
Q  76 tggacatgtattttgaaacggagggagta 104  Q
    |||||||||||||||||||||||||||||    
T  45278726 tggacatgtattttgaaacggagggagta 45278754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 6e-43; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 39358249 - 39358145
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  39358249 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 39358150  T
Q  101 agtat 105  Q
    |||||    
T  39358149 agtat 39358145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 2183116 - 2183222
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2183116 ctaatatttgtattcatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 2183215  T
Q  101 agtatta 107  Q
    |||||||    
T  2183216 agtatta 2183222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 19141225 - 19141330
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19141225 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 19141324  T
Q  101 agtatt 106  Q
    ||||||    
T  19141325 agtatt 19141330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 8042181 - 8042284
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8042181 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 8042280  T
Q  101 agta 104  Q
    ||||    
T  8042281 agta 8042284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 5405099 - 5404998
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5405099 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 5405000  T
Q  101 ag 102  Q
    ||    
T  5404999 ag 5404998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 7608152 - 7608049
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  7608152 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggatgg 7608053  T
Q  101 agta 104  Q
    ||||    
T  7608052 agta 7608049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 44365260 - 44365157
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |    
T  44365260 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattggacatgtattttgaaacggagag 44365161  T
Q  101 agta 104  Q
    ||||    
T  44365160 agta 44365157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 6223169 - 6223073
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacgga 97  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  6223169 ctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtattttgaaacgga 6223073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 11841752 - 11841841
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttg 90  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  11841752 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattggacatgtattttg 11841841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 33607476 - 33607377
Alignment:
Q  4 atatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagt 103  Q
    |||||||||||| ||||||||||||||| |||  |||||||||||||| |||||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  33607476 atatttgtatttatacattagttaaaaagtataatcaaagtaagtcaaatgaatagtgcacattgtaaaaattggacatgtattttgaaa-ggagggagt 33607378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 19262783 - 19262680
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| |||||||||||| || | |||||||||||||| |||| |||||||||||||||||||||||||     
T  19262783 ctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagttaaataaatagtgcacattgaaaaaattggacatgtattttgaaacggagga 19262684  T
Q  101 agta 104  Q
    ||||    
T  19262683 agta 19262680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 7799950 - 7799847
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||| |||||||||| || |||||||||||| ||  |||||||||||||| |||||||||||||||||||||| |  |||||||||||||||||| ||||    
T  7799950 ctaacatttgtatttatatattagttaaaaagtagggtcaaagtaagtcatgtgaatagtgcacattgcaaaaatgcgacatgtattttgaaacgtaggg 7799851  T
Q  101 agta 104  Q
    ||||    
T  7799850 agta 7799847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 36072277 - 36072185
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaa 93  Q
    ||||||||| ||||| ||||||||||||||| |||  |||||||||||||| ||||||||||| |||| |||| |||||||||||||||||||    
T  36072277 ctaatatttatatttatacattagttaaaaaatatgatcaaagtaagtcaaatgaatagtgcatattgtaaaaattggacatgtattttgaaa 36072185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 6591217 - 6591101
Alignment:
Q  140 ttgagatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgg 239  Q
    ||||||||||||||||||| |||| |||  |||||| | ||||  ||| ||||||||||||||||||| ||||| | ||||||||| ||||||||| |||    
T  6591217 ttgagatcctctccatttataattatcttcatttcctccatttgaaaatataaagacacaaaaaatcttgaaaagaatatacaatagttaatgatggtgg 6591118  T
Q  240 gactcatttattgaaag 256  Q
    | | |||||||||||||    
T  6591117 gtcccatttattgaaag 6591101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 32774693 - 32774597
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggag 98  Q
    |||||||| ||| | || |||||||||||| ||| ||||||||||||||||| |||||||||||||  |||| ||| ||||||||||||||||||||    
T  32774693 taatatttatatgtatatattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattataaaacttgaacatgtattttgaaacggag 32774597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 36719502 - 36719581
Alignment:
Q  25 ttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagtat 105  Q
    ||||||| ||| ||||||||||||||||||||||||||   |||||||| ||||||||||| ||||||||||| |||||||    
T  36719502 ttaaaaagtatggtcaaagtaagtcaagtgaatagtgcttgttgcaaaaattggacatgta-tttgaaacggaaggagtat 36719581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 9006943 - 9007049
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||| |||||||||| || |||||||||||| ||| |||||||||||  |  |||||| ||||||||| |||| |  |||||||||||||||| ||| ||    
T  9006943 ctaacatttgtatttataaattagttaaaaaatatggtcaaagtaagctacatgaataatgcacattgtaaaattgcgacatgtattttgaaatggatgg 9007042  T
Q  101 agtatta 107  Q
    |||||||    
T  9007043 agtatta 9007049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13125304 - 13125362
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatag 59  Q
    ||||||||||||||| ||||||||||||||| ||| || ||||||||||||||||||||    
T  13125304 ctaatatttgtatttatacattagttaaaaaatatggtgaaagtaagtcaagtgaatag 13125362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 44644972 - 44644905
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgc 69  Q
    |||||||| ||||| || |||||||||||| ||| ||||||||||| ||| |||||||||||||||||    
T  44644972 taatatttatatttatatattagttaaaaagtatggtcaaagtaagacaattgaatagtgcacattgc 44644905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 11931794 - 11931701
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaac 94  Q
    |||| |||||||||| || |||||||||||| ||| |||||||||||| |  |||||| |||| |||| |||| |  |||||||||||||||||    
T  11931794 ctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagttatatgaataatgcatattgtaaaattgcgacatgtattttgaaac 11931701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 43444699 - 43444791
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaa 93  Q
    |||| |||||||||| || |||||||||||| ||| ||||||| || | | ||||||| ||||||||| |||| |  ||||||||||||||||    
T  43444699 ctaacatttgtatttatatattagttaaaaaatatggtcaaagaaaattatgtgaataatgcacattgtaaaattgcgacatgtattttgaaa 43444791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 24252063 - 24251956
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||| |||||||||| || |||||||||||| ||| |||||| ||||| | ||||||| | || |||| |||| |  || ||||||||||||||||| |     
T  24252063 ctaacatttgtatttatatattagttaaaaaatatggtcaaaataagttatgtgaataatacatattgtaaaattgtgaaatgtattttgaaacggatga 24251964  T
Q  101 agtattaa 108  Q
    ||||||||    
T  24251963 agtattaa 24251956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 22839107 - 22839157
Alignment:
Q  22 tagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaa 72  Q
    |||||||||| ||| |||||||||||| | |||||||||||||||||||||    
T  22839107 tagttaaaaaatatggtcaaagtaagttatgtgaatagtgcacattgcaaa 22839157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 42133855 - 42133749
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||| |||||||||| || |||||||||||| |||  |||||||||   |  |||||||||||||||  |||| |  |||||||||||||||| | ||||    
T  42133855 ctaacatttgtatttatatattagttaaaaaatatgatcaaagtaaactatatgaatagtgcacattttaaaattacgacatgtattttgaaatgaaggg 42133756  T
Q  101 agtatta 107  Q
    |||||||    
T  42133755 agtatta 42133749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 286
Target Start/End: Complemental strand, 36758815 - 36758722
Alignment:
Q  188 gataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggactcatttattgaaagcattcactttctcttttttgtgttcatctc 286  Q
    ||||||||||||| |||| | |||||| |||||||| ||||||||||| || ||  ||||||||| ||||||||| |||   |||||| ||||||||||    
T  36758815 gataaagacacaacaaattttgaaaattgtatacaacaattaatgatggtgaga--catttattggaagcattcatttt---ttttttttgttcatctc 36758722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 5405229 - 5405261
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtatta 107  Q
    |||||||||||||||||||||||||||||||||    
T  5405229 ttggacatgtattttgaaacggagggagtatta 5405261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 7608282 - 7608314
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtatta 107  Q
    |||||||||||||||||||||||||||||||||    
T  7608282 ttggacatgtattttgaaacggagggagtatta 7608314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 13598523 - 13598440
Alignment:
Q  22 tagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagtatt 106  Q
    |||||||||| ||| ||||||||||||||  |||||||||||||||| |||| |   |||| |||||| ||||||||| ||||||    
T  13598523 tagttaaaaagtatggtcaaagtaagtcatatgaatagtgcacattg-aaaaatgcaacatatattttaaaacggaggaagtatt 13598440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 19141095 - 19141063
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtatta 107  Q
    |||||||||||||||||||||||||||||||||    
T  19141095 ttggacatgtattttgaaacggagggagtatta 19141063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 9172311 - 9172358
Alignment:
Q  7 tttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtg 54  Q
    ||||||||| ||||||||||||||| ||| |||||||||||| |||||    
T  9172311 tttgtatttatacattagttaaaaaatatggtcaaagtaagtgaagtg 9172358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 13238604 - 13238703
Alignment:
Q  143 agatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggac 242  Q
    ||||||||||||||||    | ||||||||||  |||||| || ||||||||||||| ||||||| ||||| | || |  ||||||||||||| ||||||    
T  13238604 agatcctctccatttatgcgtttctcaatttcttcaatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggtgggac 13238703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 106
Target Start/End: Complemental strand, 3518936 - 3518906
Alignment:
Q  76 tggacatgtattttgaaacggagggagtatt 106  Q
    |||||||||||||||||||||||||||||||    
T  3518936 tggacatgtattttgaaacggagggagtatt 3518906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 35316749 - 35316847
Alignment:
Q  144 gatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggac 242  Q
    ||||||||||||||||   | |||| |||||  |||||| || ||||||||||| | ||||||| ||||| |||| |  ||||||||||||| ||||||    
T  35316749 gatcctctccatttacgtgtttctccatttcttcaatttggagagataaagacatataaaatcttgaaaaaagtaaaatataattaatgatggtgggac 35316847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Complemental strand, 11841622 - 11841593
Alignment:
Q  75 ttggacatgtattttgaaacggagggagta 104  Q
    ||||||||||||||||||||||||||||||    
T  11841622 ttggacatgtattttgaaacggagggagta 11841593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Original strand, 12969988 - 12970017
Alignment:
Q  76 tggacatgtattttgaaacggagggagtat 105  Q
    ||||||||||||||||||||||||||||||    
T  12969988 tggacatgtattttgaaacggagggagtat 12970017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 44365390 - 44365419
Alignment:
Q  75 ttggacatgtattttgaaacggagggagta 104  Q
    ||||||||||||||||||||||||||||||    
T  44365390 ttggacatgtattttgaaacggagggagta 44365419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 112
Target Start/End: Original strand, 441411 - 441439
Alignment:
Q  84 tattttgaaacggagggagtattaaaata 112  Q
    |||||||||||||||||||||||||||||    
T  441411 tattttgaaacggagggagtattaaaata 441439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Complemental strand, 1102531 - 1102503
Alignment:
Q  76 tggacatgtattttgaaacggagggagta 104  Q
    |||||||||||||||||||||||||||||    
T  1102531 tggacatgtattttgaaacggagggagta 1102503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16865157 - 16865069
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtatttt 89  Q
    |||| |||||||||| ||  ||||||||||| ||| ||||||||||||||  |||||| || | |||| |||| |  ||||||||||||    
T  16865157 ctaacatttgtatttatatgttagttaaaaagtatcgtcaaagtaagtcatatgaatattgtatattgtaaaaatgcgacatgtatttt 16865069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Original strand, 34224403 - 34224431
Alignment:
Q  76 tggacatgtattttgaaacggagggagta 104  Q
    |||||||||||||||||||||||||||||    
T  34224403 tggacatgtattttgaaacggagggagta 34224431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 6e-43; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 30701821 - 30701717
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  30701821 ctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatgtattttgaaacggaggg 30701722  T
Q  101 agtat 105  Q
    |||||    
T  30701721 agtat 30701717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 6402569 - 6402677
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6402569 ctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 6402668  T
Q  101 agtattaaa 109  Q
    |||||||||    
T  6402669 agtattaaa 6402677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 16120599 - 16120702
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  16120599 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttgaaacggaggg 16120698  T
Q  101 agta 104  Q
    ||||    
T  16120699 agta 16120702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 36399201 - 36399098
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  36399201 ctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggatgg 36399102  T
Q  101 agta 104  Q
    ||||    
T  36399101 agta 36399098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 52024129 - 52024023
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||| ||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  52024129 ctaatatttatatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgcaaaaattgaacatgtattttgaaacggaggg 52024030  T
Q  101 agtatta 107  Q
    |||||||    
T  52024029 agtatta 52024023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 6766475 - 6766371
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  6766475 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtattttgaaacggaggg 6766376  T
Q  101 agtat 105  Q
    |||||    
T  6766375 agtat 6766371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 11641226 - 11641330
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  11641226 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaatggaggg 11641325  T
Q  101 agtat 105  Q
    |||||    
T  11641326 agtat 11641330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 30003636 - 30003532
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||    
T  30003636 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatgtattttgaaacggatgg 30003537  T
Q  101 agtat 105  Q
    |||||    
T  30003536 agtat 30003532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 40771931 - 40772035
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  40771931 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgtaaaaattggacatgtattttgaaacggaggg 40772030  T
Q  101 agtat 105  Q
    |||||    
T  40772031 agtat 40772035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 42788703 - 42788809
Alignment:
Q  3 aatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggag 102  Q
    ||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||| ||||||||    
T  42788703 aatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatatattttgaaatggagggag 42788802  T
Q  103 tattaaa 109  Q
    |||||||    
T  42788803 tattaaa 42788809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 17306057 - 17305952
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||| ||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  17306057 ctaatatttgtatttatatattaattaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttaaaacggaggg 17305958  T
Q  101 agtatt 106  Q
    ||||||    
T  17305957 agtatt 17305952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 36757645 - 36757749
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||    
T  36757645 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaatggatgg 36757744  T
Q  101 agtat 105  Q
    |||||    
T  36757745 agtat 36757749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 24321364 - 24321258
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattatt--gtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggag 98  Q
    ||||||||||||||| |||||||||||||||||||   |||||||||| |||||||||||||||||||||||||| || |||||||||||| ||||||||    
T  24321364 ctaatatttgtatttatacattagttaaaaattatatggtcaaagtaaatcaagtgaatagtgcacattgcaaaaattcgacatgtattttaaaacggag 24321265  T
Q  99 ggagtat 105  Q
    |||||||    
T  24321264 ggagtat 24321258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 40977647 - 40977746
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||| ||||||||||||||| |||||||||||| |||||||||||||||| |||||||||    
T  40977647 ctaatatttgtatttatacattagttaaaaagtatggtcaaagttagtcaagtgaatagtacacattgcaaaaattggacatgtattttgcaacggaggg 40977746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 27292743 - 27292642
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||| ||||||||||| ||| |||||||||| |||||||||||||||| ||||||||| |||||||| |||||||||||||||||    
T  27292743 ctaatatttgtatttatactttagttaaaaagtatagtcaaagtaaatcaagtgaatagtgcagattgcaaaaattggacatatattttgaaacggaggg 27292644  T
Q  101 ag 102  Q
    ||    
T  27292643 ag 27292642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 26910178 - 26910079
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggga 101  Q
    |||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||  ||||||||||| ||| |||||||    
T  26910178 taatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattatacatgtattttaaaatggaggga 26910079  T

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Target: chr1; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 9342804 - 9342907
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| |||  |||||||||||||||||||||  ||||||||||||| || ||||||| |||||||||||| ||    
T  9342804 ctaatatttgtatttatacattagttaaaaaatatgatcaaagtaagtcaagtgaataacgcacattgcaaaaattagacatgttttttgaaacggatgg 9342903  T
Q  101 agta 104  Q
    ||||    
T  9342904 agta 9342907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 42735324 - 42735432
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaat---tattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacgga 97  Q
    ||||||||||||||| || ||||||||||||    ||| ||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||    
T  42735324 ctaatatttgtatttatatattagttaaaaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaataattgaacatgtattttgaaacgga 42735423  T
Q  98 gggagtatt 106  Q
     ||||||||    
T  42735424 tggagtatt 42735432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 4302221 - 4302115
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||| ||||| |||||||||||||||  ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||| | |||||||| |    
T  4302221 ctaatatttatatttatacattagttaaaaaacattatcaaagtaagtcaagtaaatagtgtacattgcaaaaattgaacatgtattataaaacggagcg 4302122  T
Q  101 agtatta 107  Q
    |||||||    
T  4302121 agtatta 4302115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 15912495 - 15912585
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttga 91  Q
    |||||||||||||||  | || | | ||||| ||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  15912495 ctaatatttgtatttaaaaataaataaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtattttga 15912585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 277
Target Start/End: Complemental strand, 49384810 - 49384678
Alignment:
Q  143 agatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggac 242  Q
    |||||||||| ||||| ||||||||| |||||| | ||||| | |||||| |||||||||  ||| ||||| |||||| | ||||||||||||  |||||    
T  49384810 agatcctctctatttataattctctccatttcctccatttaaagagataaggacacaaaa--tcttgaaaaaagtataaagtaattaatgatggagggac 49384713  T
Q  243 tcatttattgaaagcattcactttctcttttttgt 277  Q
    ||||||| | |||  ||||||| ||||||||||||    
T  49384712 tcatttaattaaaatattcactatctcttttttgt 49384678  T

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Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 42367459 - 42367513
Alignment:
Q  5 tatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatag 59  Q
    ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||    
T  42367459 tatttgtatttatacattagttaaaaattatgatcaaagtaagtcaagtgaatag 42367513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 44644514 - 44644618
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||| |||||||||| || ||| |||||||| |||  ||||||||||||| ||||||| | ||||||| |||| |  |||||||||||| ||| ||||||    
T  44644514 ctaacatttgtatttatatatttgttaaaaaatatgatcaaagtaagtcatgtgaataatacacattgaaaaaatgcgacatgtattttaaaatggaggg 44644613  T
Q  101 agtat 105  Q
    |||||    
T  44644614 agtat 44644618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 48375105 - 48375018
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattt 88  Q
    ||||||||||||||| || |||||||||||| |||  ||||| ||||| ||||||||| || ||||||||||| ||| |||| |||||    
T  48375105 ctaatatttgtatttataaattagttaaaaaatatgatcaaaataagttaagtgaataatgtacattgcaaaaattgaacatatattt 48375018  T

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Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 28030840 - 28030934
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacg 95  Q
    |||| |||||||||| ||  ||||||||||| ||| |||||| ||||||| || |||| |||||||||||||| |   |||||||||||||||||    
T  28030840 ctaacatttgtatttatatgttagttaaaaagtatggtcaaaataagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacg 28030934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 15382585 - 15382682
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggag 98  Q
    ||||||||||||||| || |||| |||||||   | |||| ||||||| | |||||||||| |||||| |||| |  |||||||||||||||||||||    
T  15382585 ctaatatttgtatttatatattatttaaaaaaattggtcagagtaagttatgtgaatagtgtacattgtaaaattgcgacatgtattttgaaacggag 15382682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 44647872 - 44647976
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||| |||||||||| || ||| |||||||| |||  ||||| ||||||| ||||||| | ||||||| |||| |  |||||||||||| ||| ||||||    
T  44647872 ctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaataatacacattgaaaaaatgcgacatgtattttaaaatggaggg 44647971  T
Q  101 agtat 105  Q
    |||||    
T  44647972 agtat 44647976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 37335999 - 37336074
Alignment:
Q  161 attctctcaatttccgcaatttagaaagataaagacacaaaaaatctcg-aaaatagtatacaataattaatgatg 235  Q
    |||||||  |||||| ||||||||||||| ||||||| ||||||||| | |||| |||||||||| ||||||||||    
T  37335999 attctctttatttcctcaatttagaaagacaaagacaaaaaaaatcttgaaaaagagtatacaatgattaatgatg 37336074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 38153441 - 38153528
Alignment:
Q  6 atttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaa 93  Q
    |||||||||| ||  ||||||||||| ||| || | ||||||||| ||||||||||||||||  |||| |  ||||||||||||||||    
T  38153441 atttgtatttatatgttagttaaaaagtatggtaacagtaagtcatgtgaatagtgcacattataaaaatgcgacatgtattttgaaa 38153528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 245
Target Start/End: Complemental strand, 12381061 - 12380960
Alignment:
Q  144 gatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggact 243  Q
    |||||||||||||||    | |||| |||||  |||||| || ||||||||||||| ||||||| ||||| |||| |  ||||||||||||| |||||||    
T  12381061 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggact 12380962  T
Q  244 ca 245  Q
    ||    
T  12380961 ca 12380960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 245
Target Start/End: Complemental strand, 12385128 - 12385027
Alignment:
Q  144 gatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggact 243  Q
    |||||||||||||||    | |||| |||||  |||||| || ||||||||||||| ||||||| ||||| |||| |  ||||||||||||| |||||||    
T  12385128 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggact 12385029  T
Q  244 ca 245  Q
    ||    
T  12385028 ca 12385027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 3485371 - 3485459
Alignment:
Q  6 atttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaac 94  Q
    |||||||||| || |||||||||||| |||  ||||||||||| | | |||||||||| |||| |||| |  |||||||||||| ||||    
T  3485371 atttgtatttatatattagttaaaaaatatgatcaaagtaagttatgcgaatagtgcatattgtaaaattacgacatgtattttaaaac 3485459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 27984658 - 27984555
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||| |||||||||  || ||||||||||||| || |||||||||||  | ||||||||||||  ||| |||| |  |||||||||||| ||||||| ||    
T  27984658 ctaacatttgtattcgtatattagttaaaaat-atggtcaaagtaagcaatgtgaatagtgcatgttgtaaaattgtgacatgtattttaaaacggatgg 27984560  T
Q  101 agtat 105  Q
    |||||    
T  27984559 agtat 27984555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 30385304 - 30385392
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtatttt 89  Q
    |||| |||||||||| || |||||||||||| ||| ||||||||||   | ||||||||||||||||  |||| |  ||||||||||||    
T  30385304 ctaacatttgtatttatatattagttaaaaaatatggtcaaagtaaactatgtgaatagtgcacattataaaattgcgacatgtatttt 30385392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 44227876 - 44227844
Alignment:
Q  76 tggacatgtattttgaaacggagggagtattaa 108  Q
    |||||||||||||||||||||||||||||||||    
T  44227876 tggacatgtattttgaaacggagggagtattaa 44227844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 286
Target Start/End: Complemental strand, 5803907 - 5803769
Alignment:
Q  148 ctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggactcatt 247  Q
    ||||| ||||| ||||||||| |||| | | ||||||  |||||||||||||||| ||||  |||| | |||| |||||||||||| | || ||| ||||    
T  5803907 ctctcaatttataattctctccattttctctatttagtgagataaagacacaaaatatctttaaaaaaatataaaataattaatgaaggtgagacccatt 5803808  T
Q  248 t-attgaaagcattcactttctcttttttgtgttcatctc 286  Q
    | ||||||| |||| | | |||||||||||| || |||||    
T  5803807 taattgaaa-catttagtatctcttttttgtatttatctc 5803769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 106
Target Start/End: Original strand, 36399331 - 36399362
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtatt 106  Q
    ||||||||||||||||||||||||||||||||    
T  36399331 ttggacatgtattttgaaacggagggagtatt 36399362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 107
Target Start/End: Original strand, 41959822 - 41959853
Alignment:
Q  76 tggacatgtattttgaaacggagggagtatta 107  Q
    ||||||||||||||||||||||||||||||||    
T  41959822 tggacatgtattttgaaacggagggagtatta 41959853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 242
Target Start/End: Complemental strand, 5047539 - 5047434
Alignment:
Q  136 tgagttgagatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatg 235  Q
    |||||| ||||||||||||||||  | | |||| |||||  | ||||||| |||||||| |||||||||  | ||||| | |||| ||||||||||||||    
T  5047539 tgagttaagatcctctccatttattactatctccatttcttccatttagagagataaaggcacaaaaaagtttgaaaa-aatataaaataattaatgatg 5047441  T
Q  236 atgggac 242  Q
     ||||||    
T  5047440 gtgggac 5047434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 7841828 - 7841762
Alignment:
Q  177 caatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggact 243  Q
    |||||| || ||||||||||||| ||||||| ||||| |||| |  ||||||||||||| |||||||    
T  7841828 caatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggact 7841762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 106
Target Start/End: Complemental strand, 9588698 - 9588668
Alignment:
Q  76 tggacatgtattttgaaacggagggagtatt 106  Q
    |||||||||||||||||||||||||||||||    
T  9588698 tggacatgtattttgaaacggagggagtatt 9588668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 105
Target Start/End: Complemental strand, 11641096 - 11641066
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtat 105  Q
    |||||||||||||||||||||||||||||||    
T  11641096 ttggacatgtattttgaaacggagggagtat 11641066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 25170955 - 25170880
Alignment:
Q  26 taaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagt 103  Q
    |||||| ||| ||||||||||||||||  |||||||| |||| || || || |||||||||||| ||||| |||||||    
T  25170955 taaaaaatatggtcaaagtaagtcaag--aatagtgcgcattacagaaattagacatgtattttaaaacgaagggagt 25170880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 105
Target Start/End: Complemental strand, 36757515 - 36757485
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtat 105  Q
    |||||||||||||||||||||||||||||||    
T  36757515 ttggacatgtattttgaaacggagggagtat 36757485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 105
Target Start/End: Complemental strand, 40771801 - 40771771
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtat 105  Q
    |||||||||||||||||||||||||||||||    
T  40771801 ttggacatgtattttgaaacggagggagtat 40771771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 284361 - 284328
Alignment:
Q  76 tggacatgtattttgaaacggagggagtattaaa 109  Q
    ||||||||||||||||||||||||||||| ||||    
T  284361 tggacatgtattttgaaacggagggagtaataaa 284328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Complemental strand, 3943088 - 3943059
Alignment:
Q  76 tggacatgtattttgaaacggagggagtat 105  Q
    ||||||||||||||||||||||||||||||    
T  3943088 tggacatgtattttgaaacggagggagtat 3943059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 3943776 - 3943809
Alignment:
Q  76 tggacatgtattttgaaacggagggagtattaaa 109  Q
    ||||||||||||||||||||||||||||| ||||    
T  3943776 tggacatgtattttgaaacggagggagtactaaa 3943809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 12151724 - 12151789
Alignment:
Q  177 caatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggac 242  Q
    |||||| || ||||||||||||| ||||||| ||||| |||| |  ||||||||||||| ||||||    
T  12151724 caatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggac 12151789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 52024259 - 52024288
Alignment:
Q  75 ttggacatgtattttgaaacggagggagta 104  Q
    ||||||||||||||||||||||||||||||    
T  52024259 ttggacatgtattttgaaacggagggagta 52024288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 19711891 - 19711951
Alignment:
Q  45 aagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagtat 105  Q
    |||||| || |||||||||| |||||||| |  || |||||||||||||| ||||||||||    
T  19711891 aagtcacgtaaatagtgcacgttgcaaaaatgcgatatgtattttgaaacagagggagtat 19711951  T

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Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Original strand, 23045528 - 23045556
Alignment:
Q  76 tggacatgtattttgaaacggagggagta 104  Q
    |||||||||||||||||||||||||||||    
T  23045528 tggacatgtattttgaaacggagggagta 23045556  T

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Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Original strand, 24772154 - 24772182
Alignment:
Q  76 tggacatgtattttgaaacggagggagta 104  Q
    |||||||||||||||||||||||||||||    
T  24772154 tggacatgtattttgaaacggagggagta 24772182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 34635005 - 34634914
Alignment:
Q  6 atttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttg-gacatgtattttgaaacgga 97  Q
    |||||||||| || |||||||||||| |||| ||||| ||||| | ||||| | | |||||||| ||||||| ||||| ||||| ||||||||    
T  34635005 atttgtatttatatattagttaaaaaatattatcaaaataagttatgtgaaaacttcacattgc-aaagttgcgacatttatttagaaacgga 34634914  T

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Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Complemental strand, 41959106 - 41959078
Alignment:
Q  76 tggacatgtattttgaaacggagggagta 104  Q
    |||||||||||||||||||||||||||||    
T  41959106 tggacatgtattttgaaacggagggagta 41959078  T

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Target: chr5 (Bit Score: 86; Significance: 4e-41; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 8086190 - 8086295
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggga 101  Q
    |||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8086190 taatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggga 8086289  T
Q  102 gtatta 107  Q
    ||||||    
T  8086290 gtatta 8086295  T

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Target: chr5; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 978180 - 978077
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  978180 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 978081  T
Q  101 agta 104  Q
    ||||    
T  978080 agta 978077  T

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Target: chr5; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 40156301 - 40156198
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40156301 ctaatatttgtatttatacattaattaaaaattatggtaaaagtaagtcaagtgaatagtgcacattgcaaaagttggatatgtattttgaaacggaggg 40156202  T
Q  101 agta 104  Q
    ||||    
T  40156201 agta 40156198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 33387323 - 33387217
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  33387323 ctaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttaaaatggaggg 33387224  T
Q  101 agtatta 107  Q
    |||||||    
T  33387223 agtatta 33387217  T

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Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 14634316 - 14634414
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagg 99  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  14634316 ctaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgactagtgcacattgcaaaaattggacatgtattttgaaacggagg 14634414  T

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Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 33587629 - 33587734
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggga 101  Q
    |||||||||||||| || |||||||||||| ||| ||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||| || |||    
T  33587629 taatatttgtatttatagattagttaaaaaatatggtcaaagtaagtcaaatgaataatgcacattgcaaaaattggacatgtattttgaaacagatgga 33587728  T
Q  102 gtatta 107  Q
    ||||||    
T  33587729 gtatta 33587734  T

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Target: chr5; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 18094240 - 18094344
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| |||  | ||||||||| ||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  18094240 ctaatatttgtatttatacattagttaaaaagtataattaaagtaagttaagtgaataatgcacattgcaaaaattgaacatgtattttgaaacggaggg 18094339  T
Q  101 agtat 105  Q
    |||||    
T  18094340 agtat 18094344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 9502786 - 9502889
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||| ||  ||||||||||| ||||||||||    
T  9502786 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattaaacatgtattttaaaacggaggg 9502885  T
Q  101 agta 104  Q
    ||||    
T  9502886 agta 9502889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 11251217 - 11251126
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaa 92  Q
    ||||||||||||||| ||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  11251217 ctaatatttgtatttatacattagttaaaaagtatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaa 11251126  T

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Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 34112064 - 34111961
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggga 101  Q
    |||||||||||||| || |||||| ||||| ||| |||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||| ||    
T  34112064 taatatttgtatttatagattagtaaaaaaatatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaactagacatgtattttgaaacggagaga 34111965  T
Q  102 gtat 105  Q
    ||||    
T  34111964 gtat 34111961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 3472436 - 3472530
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacg 95  Q
    ||||||||||||||| | ||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||    
T  3472436 ctaatatttgtatttattcattagttaaaaaatatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaattgaacatgtattttgaaacg 3472530  T

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Target: chr5; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 30355033 - 30355137
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||  ||| || ||||||| |||||||||||||||| ||||||||| |||||||||||||||||||| |||||    
T  30355033 ctaatatttgtatttatatattagttaaaatgtatggttaaagtaaatcaagtgaatagtgcatattgcaaaaattggacatgtattttgaaac-gaggg 30355131  T
Q  101 agtatt 106  Q
    ||||||    
T  30355132 agtatt 30355137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 24992297 - 24992400
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| |||||||||||  | ||||||||||||||||| |||| |  |||||||||||||||||||||||    
T  24992297 ctaatatttgtatttataaattagttaaaaaatatggtcaaagtaagctatgtgaatagtgcacattgtaaaactatgacatgtattttgaaacggaggg 24992396  T
Q  101 agta 104  Q
    ||||    
T  24992397 agta 24992400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 11785891 - 11785991
Alignment:
Q  7 tttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagtatt 106  Q
    ||||||||| ||||||||||||||| |||  ||||||||||||||||||||||| |||||||||||| ||  ||||||||||||||| | || |||||||    
T  11785891 tttgtatttatacattagttaaaaagtatgatcaaagtaagtcaagtgaatagtacacattgcaaaaattaaacatgtattttgaaatgaagagagtatt 11785990  T
Q  107 a 107  Q
    |    
T  11785991 a 11785991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 38916409 - 38916513
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||| |||||||||| ||  ||||||||||| ||| ||||||| |||||| |||||||||||| | ||||||| |  |||||||||||||||||||||||    
T  38916409 ctaacatttgtatttatatgttagttaaaaagtatggtcaaagcaagtcatgtgaatagtgcatactgcaaaaatgcgacatgtattttgaaacggaggg 38916508  T
Q  101 agtat 105  Q
    |||||    
T  38916509 agtat 38916513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 9050763 - 9050827
Alignment:
Q  40 aaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagta 104  Q
    ||||||||| ||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  9050763 aaagtaagttaagtgaatagtgcacgttgcaaaaattgaacatgtattttgaaacggagggagta 9050827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 7224268 - 7224165
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||| ||| ||| ||||||||||||||| | |||||| ||||||||||||  || ||||||||||| ||||  ||||    
T  7224268 ctaatatttgtatttataaattagttagaaagtatggtcaaagtaagtcaattaaatagtacacattgcaaaaaatgaacatgtattttaaaacataggg 7224169  T
Q  101 agta 104  Q
    ||||    
T  7224168 agta 7224165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 24916405 - 24916510
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaat--tattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggag 98  Q
    ||||||||||||||| || ||||||||||||   ||| |||||||||||  | ||||||||| ||||||| |||| |  ||||||||||||||||||||     
T  24916405 ctaatatttgtatttataaattagttaaaaaaaatatggtcaaagtaagctatgtgaatagtacacattgtaaaattgtgacatgtattttgaaacggat 24916504  T
Q  99 ggagta 104  Q
    ||||||    
T  24916505 ggagta 24916510  T

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Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 3057333 - 3057441
Alignment:
Q  137 gagttgagatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatga 236  Q
    ||||| ||||| ||||||||||   |||||||| ||||  | |||| || ||||||||||||||||||  | ||||| |||||| |||||||||||||||    
T  3057333 gagttaagatcatctccatttatgtttctctcactttcttccattttgagagataaagacacaaaaaagtttgaaaaaagtataaaataattaatgatga 3057432  T
Q  237 tgggactca 245  Q
    ||| |||||    
T  3057433 tggaactca 3057441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 39776733 - 39776629
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||  ||||||||||| ||  |||||| ||||| | |||||||||| ||||||||||| |  || |||||||||||||  |||||    
T  39776733 ctaatatttgtatttatatgttagttaaaaagtacggtcaaaataagttatgtgaatagtgtacattgcaaaaatacgaaatgtattttgaaatcgaggg 39776634  T
Q  101 agtat 105  Q
    |||||    
T  39776633 agtat 39776629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 12007796 - 12007894
Alignment:
Q  6 atttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagta 104  Q
    |||||||||| || |||| ||||||| ||  |||||| ||||||| || ||||||||||| |  |||| |  |||||||||||||||||||||||||||    
T  12007796 atttgtatttatatattaattaaaaagtagggtcaaattaagtcatgtaaatagtgcacaatataaaaatgcgacatgtattttgaaacggagggagta 12007894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 12448275 - 12448333
Alignment:
Q  45 aagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagt 103  Q
    ||||||||||||||||||  ||| ||||| || ||||||||||||||||||||||||||    
T  12448275 aagtcaagtgaatagtgcgtattacaaaaattagacatgtattttgaaacggagggagt 12448333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 128140 - 128201
Alignment:
Q  143 agatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaa 204  Q
    ||||||||||||||||||||| |||| |||||| | ||||||| ||||||| ||||||||||    
T  128140 agatcctctccatttacaattgtctccatttcctccatttagagagataaaaacacaaaaaa 128201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 10696856 - 10696790
Alignment:
Q  38 tcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagta 104  Q
    |||||||||||||  |||||||||||||||||||||    ||| |||||||||||||||| ||||||    
T  10696856 tcaaagtaagtcatatgaatagtgcacattgcaaaatagcgacgtgtattttgaaacggatggagta 10696790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 9502656 - 9502623
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtattaa 108  Q
    ||||||||||||||||||||||||||||||||||    
T  9502656 ttggacatgtattttgaaacggagggagtattaa 9502623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 18598620 - 18598543
Alignment:
Q  28 aaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagtat 105  Q
    |||| ||| |||||||||| ||| || |||| |||||||||||||| |  ||||||||||||||||| || |||||||    
T  18598620 aaaagtatggtcaaagtaattcatgtcaataatgcacattgcaaaaatgcgacatgtattttgaaacagatggagtat 18598543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 20692551 - 20692653
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggga 101  Q
    |||||||||||||| ||  || |||||||| ||| |||||| || |||||||| ||| |||||||||||||| |  ||| |||||||| |||| ||| ||    
T  20692551 taatatttgtatttata--ttggttaaaaagtatggtcaaaatacgtcaagtggataatgcacattgcaaaaatgtgacgtgtattttaaaacagagaga 20692648  T
Q  102 gtatt 106  Q
    |||||    
T  20692649 gtatt 20692653  T

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Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 31197854 - 31197911
Alignment:
Q  6 atttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgca 63  Q
    |||||||||| ||  |||||||||||||||||||||||||||| | || |||||||||    
T  31197854 atttgtatttatattttagttaaaaattattgtcaaagtaagttaggtcaatagtgca 31197911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 32017316 - 32017217
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||| |||||||||| || |||||||||||| |||  ||||||||||| | ||||||| |||||||   |||| |  | |||||||||| ||||||||||    
T  32017316 ctaacatttgtatttatatattagttaaaaaatatgatcaaagtaagttatgtgaatattgcacatcataaaattgcgtcatgtattttaaaacggaggg 32017217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 32129768 - 32129670
Alignment:
Q  144 gatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggac 242  Q
    ||||||||||||||| |  | |||| |||||  |||||| || ||||||||||||| ||||| | ||||| |||| |  ||||||||||||| ||||||    
T  32129768 gatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggac 32129670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 978310 - 978339
Alignment:
Q  75 ttggacatgtattttgaaacggagggagta 104  Q
    ||||||||||||||||||||||||||||||    
T  978310 ttggacatgtattttgaaacggagggagta 978339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Complemental strand, 14634186 - 14634157
Alignment:
Q  75 ttggacatgtattttgaaacggagggagta 104  Q
    ||||||||||||||||||||||||||||||    
T  14634186 ttggacatgtattttgaaacggagggagta 14634157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27109791 - 27109735
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaata 58  Q
    ||||||||||||||| ||||||| ||||||| || | |||||||||||||| ||||||    
T  27109791 ctaatatttgtatttttacattaattaaaaagta-tatcaaagtaagtcaaatgaata 27109735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 27579589 - 27579681
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaac 94  Q
    |||| |||||||||| || |||||||||||| ||| || |||||||||| | |||||| | |||||  ||||| |  |||||||||||||||||    
T  27579589 ctaacatttgtatttatatattagttaaaaaatatagttaaagtaagtc-attgaataatacacatcacaaaaatgtgacatgtattttgaaac 27579681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 30720741 - 30720774
Alignment:
Q  76 tggacatgtattttgaaacggagggagtattaaa 109  Q
    ||||||||||||||||||||||||||||| ||||    
T  30720741 tggacatgtattttgaaacggagggagtaataaa 30720774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 33387452 - 33387481
Alignment:
Q  75 ttggacatgtattttgaaacggagggagta 104  Q
    ||||||||||||||||||||||||||||||    
T  33387452 ttggacatgtattttgaaacggagggagta 33387481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 35660727 - 35660662
Alignment:
Q  177 caatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggac 242  Q
    |||||| || ||||||||||||| ||||||| ||||| |||| |  ||||||||||||| ||||||    
T  35660727 caatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggac 35660662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 12456799 - 12456871
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaa 73  Q
    |||| |||||||||| || |||||||||||| |||  | ||||||||| | || |||||||||||||| ||||    
T  12456799 ctaacatttgtatttgtatattagttaaaaaatatgattaaagtaagttatgtaaatagtgcacattgtaaaa 12456871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Original strand, 12807102 - 12807130
Alignment:
Q  76 tggacatgtattttgaaacggagggagta 104  Q
    |||||||||||||||||||||||||||||    
T  12807102 tggacatgtattttgaaacggagggagta 12807130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Original strand, 15305237 - 15305265
Alignment:
Q  76 tggacatgtattttgaaacggagggagta 104  Q
    |||||||||||||||||||||||||||||    
T  15305237 tggacatgtattttgaaacggagggagta 15305265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Complemental strand, 25773677 - 25773649
Alignment:
Q  76 tggacatgtattttgaaacggagggagta 104  Q
    |||||||||||||||||||||||||||||    
T  25773677 tggacatgtattttgaaacggagggagta 25773649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 27762927 - 27762836
Alignment:
Q  143 agatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatg 235  Q
    |||||||||||||||| |||| | || |||||| | |||| || ||||||| | ||||||||||| | ||| | |||| ||||||||||||||    
T  27762927 agatcctctccatttataattgtttccatttccaccattttgagagataaaaatacaaaaaatcttggaaa-aatatataataattaatgatg 27762836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 4e-41; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 38416809 - 38416914
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  38416809 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 38416908  T
Q  101 agtatt 106  Q
    ||||||    
T  38416909 agtatt 38416914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 136 - 264
Target Start/End: Complemental strand, 33841963 - 33841835
Alignment:
Q  136 tgagttgagatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatg 235  Q
    |||||||||||||||| |||||||||||||||| |||||| | |||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  33841963 tgagttgagatcctcttcatttacaattctctccatttcctccatttggaaagataaagacacaaaaaatcttgaaaagagtatacaataattaatgatg 33841864  T
Q  236 atgggactcatttattgaaagcattcact 264  Q
     |||||| ||||||| |||| ||||||||    
T  33841863 gtgggacccatttatcgaaaccattcact 33841835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 26170089 - 26169986
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26170089 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggaggg 26169990  T
Q  101 agta 104  Q
    ||||    
T  26169989 agta 26169986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 47386445 - 47386549
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||    
T  47386445 ctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattccaaaaagtggacatgtattttgaaacggaggg 47386544  T
Q  101 agtat 105  Q
    |||||    
T  47386545 agtat 47386549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 2760886 - 2760989
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  2760886 ctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtattttgaaacggaggg 2760985  T
Q  101 agta 104  Q
    ||||    
T  2760986 agta 2760989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 35686475 - 35686373
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggga 101  Q
    |||||||||||||| ||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  35686475 taatatttgtatttatacattagttaaaaagtatggtcaaagtaagttaagtgaatagtgcacattgcaaaaattggacatgtattttgaaactgaggga 35686376  T
Q  102 gta 104  Q
    |||    
T  35686375 gta 35686373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 35381053 - 35381157
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||    
T  35381053 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaattggacatgtattttgaaacggaggg 35381152  T
Q  101 agtat 105  Q
    |||||    
T  35381153 agtat 35381157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 17610383 - 17610280
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| |||||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  17610383 ctaatatttgtatttatacattagctaaaaaatatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattggacatgtattttaaaacggaggg 17610284  T
Q  101 agta 104  Q
    ||||    
T  17610283 agta 17610280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 25296739 - 25296842
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||| |    
T  25296739 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagatatgtattttgaaacggagag 25296838  T
Q  101 agta 104  Q
    ||||    
T  25296839 agta 25296842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 29830446 - 29830343
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| |||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  29830446 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattaaaaaaattggacatgtattttgaaacggaggg 29830347  T
Q  101 agta 104  Q
    ||||    
T  29830346 agta 29830343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 44232236 - 44232339
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||    
T  44232236 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtattttgaaacggatgg 44232335  T
Q  101 agta 104  Q
    ||||    
T  44232336 agta 44232339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 54330849 - 54330952
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  54330849 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagcgcacattgcaaaaattggacatgtatttcgaaacggaggg 54330948  T
Q  101 agta 104  Q
    ||||    
T  54330949 agta 54330952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 55209733 - 55209836
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| |||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  55209733 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattggaaaaattggacatgtattttgaaacggaggg 55209832  T
Q  101 agta 104  Q
    ||||    
T  55209833 agta 55209836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 43967826 - 43967721
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||| ||    
T  43967826 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagttaatagtgcacattgcaaaaattgaacatgtattttgaaacggaagg 43967727  T
Q  101 agtatt 106  Q
    ||||||    
T  43967726 agtatt 43967721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 38716989 - 38716886
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||| |||||    
T  38716989 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaatt-aatagtgcacattgcaaaaattggacatgtattttgaaacagaggg 38716891  T
Q  101 agtat 105  Q
    |||||    
T  38716890 agtat 38716886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 55800937 - 55800837
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| | |||||| |||||||||||||    
T  55800937 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaagatgtatattgaaacggaggg 55800838  T
Q  101 a 101  Q
    |    
T  55800837 a 55800837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 12240337 - 12240430
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaac 94  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||    
T  12240337 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaattggacatgtattttgaaac 12240430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 31010317 - 31010214
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||| ||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||||||| ||||| ||||| |||||||||||||| |||||    
T  31010317 ctaatatttttatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattacaaaaattggatatgtattttgaaaccgaggg 31010218  T
Q  101 agta 104  Q
    ||||    
T  31010217 agta 31010214  T

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Target: chr4; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 55191927 - 55191827
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||||||||||||||  |||||| ||||||| ||| ||||||||||||||| ||||||||||||||||||||| ||| |||| |||||||||||||||||    
T  55191927 ctaatatttgtatttacacattaattaaaaagtatagtcaaagtaagtcaaatgaatagtgcacattgcaaaaattgaacatatattttgaaacggaggg 55191828  T
Q  101 a 101  Q
    |    
T  55191827 a 55191827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 12625354 - 12625260
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacg 95  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||  ||||||||||| ||||||||| ||| |||||||||||||||||    
T  12625354 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcagatgaatagtgcatattgcaaaaattgaacatgtattttgaaacg 12625260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 50205846 - 50205742
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||| ||||||||||||||| |||||  | |||||||||||||||||| | ||    
T  50205846 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattacaaaaacttgacatgtattttgaaacgaatgg 50205747  T
Q  101 agtat 105  Q
    |||||    
T  50205746 agtat 50205742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 26125811 - 26125708
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||| |||| |||| |||| ||| |  | |||||||||||||||||    
T  26125811 ctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaataatgcatattgtaaaaattgaatttatattttgaaacggaggg 26125712  T
Q  101 agta 104  Q
    ||||    
T  26125711 agta 26125708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 19433517 - 19433624
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattatt----gtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacgg 96  Q
    ||||||||||||||| |||| |||||||||| |||     |||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||| |    
T  19433517 ctaatatttgtatttatacaatagttaaaaagtatatatggtcaaagtaagtcaagtgaaaagtgcacattgcaaaaattgaacatgtattttgaaacag 19433616  T
Q  97 agggagta 104  Q
    ||||||||    
T  19433617 agggagta 19433624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 25918306 - 25918210
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacgga 97  Q
    ||||||||| ||||| |||||| |||||||| ||  |||||| ||| |||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  25918306 ctaatatttatatttatacattggttaaaaagtagggtcaaaataattcaagtgaatagtgcacattgcaaaaattggacatgtattttaaaacgga 25918210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 17446793 - 17446892
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggga 101  Q
    |||||||||||||| ||||||||||||||  ||| |||||||| |||||| |||||||||||||||| |||| |||||||| |||||| ||| |||||||    
T  17446793 taatatttgtatttatacattagttaaaatgtatggtcaaagttagtcaaatgaatagtgcacattgtaaaaattggacatatattttaaaatggaggga 17446892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 9029608 - 9029714
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaa---agttggacatgtattttgaaacgga 97  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||||| |||| |||||| || ||||||||   | ||||||||||||||| |||||||    
T  9029608 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagttaagtaaatagtacagattgcaaaattaattggacatgtattttaaaacgga 9029707  T
Q  98 gggagta 104  Q
     ||||||    
T  9029708 tggagta 9029714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 50620841 - 50620937
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacgga 97  Q
    |||||||| |||||| ||||||||||||||  ||| |||||||||||| |||||||||||||| ||||| ||| |||||||| |||||| |||||||    
T  50620841 ctaatattagtatttatacattagttaaaatgtatggtcaaagtaagttaagtgaatagtgcatattgctaaaattggacatatattttaaaacgga 50620937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 3037083 - 3036984
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||| |||||||||||||| ||||||||| ||||||| | || |  ||||||||||||||||| |||||    
T  3037083 ctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcatgtgaatagtacacattgtataattacgacatgtattttgaaacagaggg 3036984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 36523132 - 36523230
Alignment:
Q  6 atttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagta 104  Q
    |||||||||| || |||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |  ||||| |||||||||||||| ||||||    
T  36523132 atttgtatttatatattagttaaaaagtatagtcaaagtaagtcatgtaaatagtgcatattgcaaaaatgcgacatatattttgaaacggatggagta 36523230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 45291935 - 45291863
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaa 73  Q
    ||||||||||||||| || |||||||||||| |||  ||||||||||||||||||||||||||||||| ||||    
T  45291935 ctaatatttgtatttatatattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattggaaaa 45291863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 27407778 - 27407881
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| || |||||||||||| ||  |||||||||||| | ||||||||| |||| ||||||| |  | |||||||||||||| ||||||    
T  27407778 ctaatatttgtatttatatattagttaaaaagtagggtcaaagtaagttatgtgaatagttcacactgcaaaaatgcgtcatgtattttgaaatggaggg 27407877  T
Q  101 agta 104  Q
    ||||    
T  27407878 agta 27407881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 5428661 - 5428571
Alignment:
Q  21 ttagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagtattaaaat 111  Q
    ||||||||||| ||| ||||| |||||||| |||||||||||||||||| ||| |  ||||||||||||||||||||  ||||||| ||||    
T  5428661 ttagttaaaaagtatggtcaacgtaagtcatgtgaatagtgcacattgccaaaatgcgacatgtattttgaaacggatagagtatttaaat 5428571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 54610966 - 54610861
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaat-agtgcacattgcaaaagttggacatgtattttgaaacggagg 99  Q
    ||||||| ||||||| ||||||| ||||||| |||  | |||||||||||||||||| |||| ||||||||||| ||  |||| |||||||||||||||     
T  54610966 ctaatatctgtatttatacattaattaaaaaatatgattaaagtaagtcaagtgaataagtgtacattgcaaaaattaaacatatattttgaaacggaga 54610867  T
Q  100 gagtat 105  Q
    ||||||    
T  54610866 gagtat 54610861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19595808 - 19595736
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaa 73  Q
    ||||||||||||||| ||||||||||||| | ||| || |||||||||||||||||||||||| |||| ||||    
T  19595808 ctaatatttgtatttatacattagttaaagagtatggttaaagtaagtcaagtgaatagtgcatattgtaaaa 19595736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 279
Target Start/End: Complemental strand, 3281010 - 3280868
Alignment:
Q  137 gagttgagatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacaca-aaaaatctcgaaaatagtatacaataattaatgatg 235  Q
    ||||||| ||| ||| |||||| ||||||||  |||||| | ||||||||||||||| ||||| |||||||| |||||   |||||||||||||| ||      
T  3281010 gagttgaaatcatcttcatttataattctcttcatttcctccatttagaaagataaaaacacacaaaaatcttgaaaaatatatacaataattaacgaca 3280911  T
Q  236 atgggactcatttattgaaagcattcactttctcttttttgtgt 279  Q
    | | ||  ||||||||||||||||||||| ||| ||||||||||    
T  3280910 acgagatccatttattgaaagcattcactatct-ttttttgtgt 3280868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 39307799 - 39307696
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||| |||||||||| || |||||||||||| ||   ||||||||||||| |||||||| | | ||||||||| |  |||||||||||||||||||| ||    
T  39307799 ctaacatttgtatttatatattagttaaaaagtagcatcaaagtaagtcatgtgaatagggtatattgcaaaaatgcgacatgtattttgaaacggatgg 39307700  T
Q  101 agta 104  Q
    ||||    
T  39307699 agta 39307696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4467678 - 4467744
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacatt 67  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||| ||||||||| |||| ||||||||    
T  4467678 ctaatatttgtatttatacattagttaaaaagtatagtcaaagcaagtcaagtaaataatgcacatt 4467744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 34652208 - 34652303
Alignment:
Q  3 aatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggag 98  Q
    ||||||||||||| ||  ||||||||||| ||| ||| |||||||||  || |||||| |||||| ||||| |  |||||||||||||||||||||    
T  34652208 aatatttgtatttatatgttagttaaaaaatatggtcgaagtaagtcgtgtaaatagtacacattacaaaaatgtgacatgtattttgaaacggag 34652303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 18207191 - 18207093
Alignment:
Q  144 gatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggac 242  Q
    |||||||||||||||    | ||||||||||  |||||| |||||||||||||||| ||||||| |||||  ||| |  ||||||||||||||||||||    
T  18207191 gatcctctccatttatgtgtttctcaatttcttcaatttggaaagataaagacacataaaatcttgaaaaaggtaaaatataattaatgatgatgggac 18207093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 2571041 - 2571133
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaa 93  Q
    |||| |||||||||| || |||||||||||| ||| |||||| ||| ||| ||||||| ||||||||  |||| |  ||||||||||||||||    
T  2571041 ctaacatttgtatttatatattagttaaaaaatatagtcaaaataaatcatgtgaataatgcacattataaaaatgtgacatgtattttgaaa 2571133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 7614718 - 7614614
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||| |||||||||| || |||||||||||| ||| |||||| ||||||| |||| || |  | |||| |||| |  |||||||||||||||||||| ||    
T  7614718 ctaacatttgtatttatatattagttaaaaaatatggtcaaaataagtcatgtgattaatatatattgtaaaattacgacatgtattttgaaacggatgg 7614619  T
Q  101 agtat 105  Q
    |||||    
T  7614618 agtat 7614614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 37767117 - 37767221
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||| |||||||||| || ||  |||||||| ||| |||||||||||||| || ||||||||| ||| ||||| |  |||||  ||||| ||||||||||    
T  37767117 ctaacatttgtatttatatatacgttaaaaagtatagtcaaagtaagtcacgtaaatagtgcatatttcaaaattgcgacattcattttaaaacggaggg 37767216  T
Q  101 agtat 105  Q
    |||||    
T  37767217 agtat 37767221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 38721440 - 38721336
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||| |||||||||| || ||| |||||||| |||  ||||| ||||||| ||||||| | ||||||| |||| |  |||||||||||| ||| ||||||    
T  38721440 ctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaataatacacattgaaaaaatgcgacatgtattttaaaatggaggg 38721341  T
Q  101 agtat 105  Q
    |||||    
T  38721340 agtat 38721336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 19897723 - 19897634
Alignment:
Q  20 attagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagtattaaa 109  Q
    ||||||| |||| | | |||||||||||| | |||||||||| |||||| |||| |  |||| ||||||||||||| |||||||| ||||    
T  19897723 attagttcaaaaatgtggtcaaagtaagttatgtgaatagtgtacattgtaaaattgcgacaagtattttgaaacgaagggagtactaaa 19897634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 26170220 - 26170253
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtattaa 108  Q
    ||||||||||||||||||||||||||||||||||    
T  26170220 ttggacatgtattttgaaacggagggagtattaa 26170253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 29051782 - 29051681
Alignment:
Q  6 atttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagtat 105  Q
    |||||||||| || |||||||||||| ||| |||||||||||| | ||||||| || | |||| |||| |   ||||||||||| ||||||| | |||||    
T  29051782 atttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaataatgtatattgtaaaattgcaacatgtattttaaaacggatgtagtat 29051683  T
Q  106 ta 107  Q
    ||    
T  29051682 ta 29051681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 23360273 - 23360189
Alignment:
Q  6 atttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaa 93  Q
    |||||||||  || |||||||||||| ||  ||||||||||||||  ||||||||||| ||||||||| |  ||||||||||||||||    
T  23360273 atttgtattcatatattagttaaaaaatag-gtcaaagtaagtca--tgaatagtgcatattgcaaaaatgcgacatgtattttgaaa 23360189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 12153095 - 12153193
Alignment:
Q  144 gatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggac 242  Q
    |||||||||||||||    | |||| |||||  |||||| || ||||||||||||| ||||||| ||||| |||| |  ||||||||||||| ||||||    
T  12153095 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggac 12153193  T

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Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 45292065 - 45292099
Alignment:
Q  75 ttggacatgtattttgaaacggagggagtattaaa 109  Q
    |||||||||||||||||||||||||||||| ||||    
T  45292065 ttggacatgtattttgaaacggagggagtactaaa 45292099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 56558203 - 56558301
Alignment:
Q  144 gatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggac 242  Q
    ||||||||||||||| |  | |||| |||||  |||||| || ||||||||||||| ||||| | ||||| |||| |  ||||||||||||| ||||||    
T  56558203 gatcctctccatttatatgtttctctatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggac 56558301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Complemental strand, 2760759 - 2760730
Alignment:
Q  75 ttggacatgtattttgaaacggagggagta 104  Q
    ||||||||||||||||||||||||||||||    
T  2760759 ttggacatgtattttgaaacggagggagta 2760730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Complemental strand, 4467549 - 4467520
Alignment:
Q  75 ttggacatgtattttgaaacggagggagta 104  Q
    ||||||||||||||||||||||||||||||    
T  4467549 ttggacatgtattttgaaacggagggagta 4467520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Complemental strand, 12071589 - 12071560
Alignment:
Q  76 tggacatgtattttgaaacggagggagtat 105  Q
    ||||||||||||||||||||||||||||||    
T  12071589 tggacatgtattttgaaacggagggagtat 12071560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 12241526 - 12241461
Alignment:
Q  177 caatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggac 242  Q
    |||||| || ||||||||||||| ||||||| ||||| |||| |  ||||||||||||| ||||||    
T  12241526 caatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggac 12241461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Complemental strand, 14261072 - 14261043
Alignment:
Q  76 tggacatgtattttgaaacggagggagtat 105  Q
    ||||||||||||||||||||||||||||||    
T  14261072 tggacatgtattttgaaacggagggagtat 14261043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Complemental strand, 19433387 - 19433358
Alignment:
Q  75 ttggacatgtattttgaaacggagggagta 104  Q
    ||||||||||||||||||||||||||||||    
T  19433387 ttggacatgtattttgaaacggagggagta 19433358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Complemental strand, 21310453 - 21310424
Alignment:
Q  76 tggacatgtattttgaaacggagggagtat 105  Q
    ||||||||||||||||||||||||||||||    
T  21310453 tggacatgtattttgaaacggagggagtat 21310424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Complemental strand, 25704679 - 25704650
Alignment:
Q  76 tggacatgtattttgaaacggagggagtat 105  Q
    ||||||||||||||||||||||||||||||    
T  25704679 tggacatgtattttgaaacggagggagtat 25704650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Complemental strand, 38416679 - 38416650
Alignment:
Q  75 ttggacatgtattttgaaacggagggagta 104  Q
    ||||||||||||||||||||||||||||||    
T  38416679 ttggacatgtattttgaaacggagggagta 38416650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Original strand, 40122734 - 40122763
Alignment:
Q  76 tggacatgtattttgaaacggagggagtat 105  Q
    ||||||||||||||||||||||||||||||    
T  40122734 tggacatgtattttgaaacggagggagtat 40122763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Complemental strand, 44232106 - 44232077
Alignment:
Q  75 ttggacatgtattttgaaacggagggagta 104  Q
    ||||||||||||||||||||||||||||||    
T  44232106 ttggacatgtattttgaaacggagggagta 44232077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Complemental strand, 55209603 - 55209574
Alignment:
Q  75 ttggacatgtattttgaaacggagggagta 104  Q
    ||||||||||||||||||||||||||||||    
T  55209603 ttggacatgtattttgaaacggagggagta 55209574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 4404212 - 4404284
Alignment:
Q  132 attttgagttgagatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaa 204  Q
    |||||||||  ||||||||||||||||     ||||| |||||| | ||||||||||||||||||||| ||||    
T  4404212 attttgagtcaagatcctctccatttatttccctctccatttcctccatttagaaagataaagacacataaaa 4404284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 107
Target Start/End: Original strand, 12625488 - 12625516
Alignment:
Q  79 acatgtattttgaaacggagggagtatta 107  Q
    |||||||||||||||||||||||||||||    
T  12625488 acatgtattttgaaacggagggagtatta 12625516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Original strand, 34324832 - 34324860
Alignment:
Q  76 tggacatgtattttgaaacggagggagta 104  Q
    |||||||||||||||||||||||||||||    
T  34324832 tggacatgtattttgaaacggagggagta 34324860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 249
Target Start/End: Original strand, 39862474 - 39862546
Alignment:
Q  177 caatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggactcattta 249  Q
    |||||| || ||||||||||||| |||||||  |||| |||| |  ||||||||||||| ||| |||||||||    
T  39862474 caatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatggtggaactcattta 39862546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 161996 - 162102
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||    
T  161996 ctaatatttgtatttatacattagttaaaaagtatggtcaatgtaagtcaagtgaatagtgcacattacaaaaattagacatgtattttgaaacggaggg 162095  T
Q  101 agtatta 107  Q
    |||||||    
T  162096 agtatta 162102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 71063 - 70961
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||||||||| |||||||||||||||| || |||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  71063 ctaatatttgtatttatacattagttaaaaat-atggtcaaaataagtcaagtgaatagtgcatattgcaaaaattggacatgtattttgaaatggaggg 70965  T
Q  101 agta 104  Q
    ||||    
T  70964 agta 70961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 67929 - 68028
Alignment:
Q  2 taatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggga 101  Q
    |||||||||||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||| |||||    
T  67929 taatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacatttcaaaaattggacatgtattttgaaacgtaggga 68028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 13876 - 13982
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    ||||||||| ||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||  || |||||||||||| ||||||||||    
T  13876 ctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaatattagacatgtattttaaaacggaggg 13975  T
Q  101 agtatta 107  Q
    |||||||    
T  13976 agtatta 13982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 9433 - 9369
Alignment:
Q  43 gtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggagggagtatta 107  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  9433 gtaagtcaagtgaatagtgcacattgcaaaaattagacatgtattttgaaacggagggagtatta 9369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 28811 - 28916
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatag-tgcacattgcaaaagttggacatgta-ttttgaaacggag 98  Q
    ||||||||||||||| || |||||||||||| ||| |||||||||||  | |||||||| ||||||||| |||| |  |||||||| |||||||||||||    
T  28811 ctaatatttgtatttataaattagttaaaaaatatggtcaaagtaagctatgtgaatagttgcacattgtaaaactatgacatgtatttttgaaacggag 28910  T
Q  99 ggagta 104  Q
    ||||||    
T  28911 ggagta 28916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 8992 - 9099
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||| |||||||||| || |||||||||||| | | |||||||||||| | ||||||| |||| |||| |||| |  || ||||||| ||||||||| |     
T  8992 ctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaattgtgaaatgtattatgaaacggatga 9091  T
Q  101 agtattaa 108  Q
    ||||||||    
T  9092 agtattaa 9099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 243
Target Start/End: Original strand, 5534 - 5633
Alignment:
Q  144 gatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggact 243  Q
    |||||||||||||||  || ||||  |||||  | |||| || ||||||||||| ||| ||  | ||||| |||||| ||||||||||||||||||||||    
T  5534 gatcctctccatttatgatcctcttcatttcttccatttggagagataaagacataaagaagtttgaaaaaagtataaaataattaatgatgatgggact 5633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 138189 - 138296
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgcacattgcaaaagttggacatgtattttgaaacggaggg 100  Q
    |||| |||||||||| || |||||||||||| | | |||||||||||| | ||||||| |||| |||| |||| |  || ||||||| ||||| ||| |     
T  138189 ctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaattgtgaaatgtattatgaaagggatga 138288  T
Q  101 agtattaa 108  Q
    ||||||||    
T  138289 agtattaa 138296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 242
Target Start/End: Original strand, 13640 - 13718
Alignment:
Q  164 ctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggac 242  Q
    ||||| |||||  |||||| || ||||||||||||| ||||||| ||||| |||| |  ||||||||||||| ||||||    
T  13640 ctctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggac 13718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 207987 - 208085
Alignment:
Q  144 gatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggac 242  Q
    |||||||||||||||    | |||| |||||  |||||| || ||||||||||||| |||||||  |||| |||| |  ||||||||||||||||||||    
T  207987 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatgatgggac 208085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 1222 - 1161
Alignment:
Q  143 agatcctctccatttacaattctctcaatttccgcaatttagaaagataaagacacaaaaaa 204  Q
    ||||||||||||||||||||| |||| |||||| | | || || ||||||||| ||||||||    
T  1222 agatcctctccatttacaattgtctccatttcctccaatttgagagataaagatacaaaaaa 1161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4051 - 3990
Alignment:
Q  1 ctaatatttgtatttctacattagttaaaaattattgtcaaagtaagtcaagtgaatagtgc 62  Q
    |||| |||||||||| || |||||||||||| ||| |||||||||||  | |||||||||||    
T  4051 ctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagctatgtgaatagtgc 3990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 73958 - 73893
Alignment:
Q  177 caatttagaaagataaagacacaaaaaatctcgaaaatagtatacaataattaatgatgatgggac 242  Q
    ||||||||| ||||||| ||||| ||||||| ||||| | || |  ||||||||||||||||||||    
T  73958 caatttagagagataaaaacacataaaatcttgaaaaaaataaaatataattaatgatgatgggac 73893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Complemental strand, 23495 - 23467
Alignment:
Q  76 tggacatgtattttgaaacggagggagta 104  Q
    |||||||||||||||||||||||||||||    
T  23495 tggacatgtattttgaaacggagggagta 23467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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