View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21073_low_7 (Length: 223)

Name: NF21073_low_7
Description: NF21073
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21073_low_7
NF21073_low_7
[»] chr2 (25 HSPs)
chr2 (21-211)||(17471613-17471805)
chr2 (149-193)||(34080182-34080226)
chr2 (149-193)||(9671260-9671304)
chr2 (149-193)||(10543781-10543825)
chr2 (149-193)||(10546244-10546288)
chr2 (149-193)||(14530401-14530445)
chr2 (151-193)||(14444809-14444851)
chr2 (150-195)||(3633719-3633764)
chr2 (149-193)||(8455326-8455370)
chr2 (149-193)||(21779271-21779315)
chr2 (149-193)||(23488564-23488608)
chr2 (148-192)||(24859997-24860041)
chr2 (153-193)||(34766336-34766376)
chr2 (149-193)||(40579759-40579803)
chr2 (149-193)||(41409943-41409987)
chr2 (150-193)||(5841111-5841154)
chr2 (149-187)||(124924-124962)
chr2 (151-193)||(8575976-8576018)
chr2 (148-190)||(11514519-11514561)
chr2 (151-193)||(14544147-14544189)
chr2 (149-187)||(22371199-22371237)
chr2 (152-193)||(24890492-24890533)
chr2 (149-193)||(25079727-25079771)
chr2 (149-193)||(36871573-36871616)
chr2 (149-193)||(44643604-44643648)
[»] chr8 (28 HSPs)
chr8 (149-193)||(20284079-20284123)
chr8 (149-193)||(21070707-21070751)
chr8 (149-195)||(39461004-39461050)
chr8 (149-193)||(16013537-16013581)
chr8 (149-193)||(7136537-7136581)
chr8 (149-193)||(12625971-12626015)
chr8 (149-193)||(12670260-12670304)
chr8 (153-193)||(18595919-18595959)
chr8 (149-193)||(26102598-26102642)
chr8 (149-193)||(27507991-27508035)
chr8 (153-193)||(28817640-28817680)
chr8 (149-193)||(30454107-30454151)
chr8 (149-193)||(35261760-35261804)
chr8 (149-193)||(44530230-44530274)
chr8 (149-188)||(27468102-27468141)
chr8 (151-193)||(8897776-8897818)
chr8 (149-187)||(18164770-18164808)
chr8 (151-193)||(29877175-29877217)
chr8 (151-193)||(36720877-36720919)
chr8 (149-190)||(16225105-16225146)
chr8 (149-193)||(2677621-2677665)
chr8 (149-193)||(6760905-6760949)
chr8 (149-193)||(13160782-13160826)
chr8 (163-195)||(20869524-20869556)
chr8 (149-193)||(20870006-20870050)
chr8 (149-193)||(25250605-25250649)
chr8 (149-193)||(28407484-28407528)
chr8 (149-193)||(45071345-45071389)
[»] chr4 (36 HSPs)
chr4 (149-211)||(20639668-20639730)
chr4 (149-193)||(23501870-23501914)
chr4 (149-193)||(32484314-32484358)
chr4 (149-193)||(38755918-38755962)
chr4 (149-193)||(40553947-40553991)
chr4 (149-193)||(44363140-44363184)
chr4 (152-195)||(30639458-30639501)
chr4 (149-192)||(50555666-50555709)
chr4 (151-193)||(30690188-30690230)
chr4 (150-192)||(54730334-54730376)
chr4 (146-191)||(51865045-51865090)
chr4 (149-193)||(11394933-11394977)
chr4 (149-193)||(11404660-11404704)
chr4 (149-193)||(20225063-20225107)
chr4 (149-193)||(20225157-20225201)
chr4 (149-193)||(25629130-25629174)
chr4 (149-193)||(29207908-29207952)
chr4 (153-193)||(33836501-33836541)
chr4 (149-189)||(35532077-35532117)
chr4 (149-193)||(38786690-38786734)
chr4 (149-192)||(11054158-11054201)
chr4 (149-192)||(16408611-16408654)
chr4 (152-211)||(20908649-20908708)
chr4 (150-193)||(30352591-30352634)
chr4 (149-211)||(54175127-54175190)
chr4 (155-193)||(14983915-14983953)
chr4 (148-190)||(40915912-40915954)
chr4 (152-193)||(5648339-5648380)
chr4 (149-193)||(6430636-6430680)
chr4 (153-193)||(8820589-8820629)
chr4 (148-192)||(10277766-10277810)
chr4 (153-193)||(20405170-20405210)
chr4 (149-193)||(21647047-21647091)
chr4 (149-193)||(25388257-25388301)
chr4 (149-193)||(35567251-35567295)
chr4 (153-193)||(47482864-47482904)
[»] chr5 (25 HSPs)
chr5 (148-193)||(25622541-25622586)
chr5 (149-193)||(8169994-8170038)
chr5 (149-193)||(16957395-16957439)
chr5 (149-193)||(38879664-38879708)
chr5 (150-193)||(12006339-12006382)
chr5 (151-195)||(7097772-7097816)
chr5 (142-190)||(13774949-13774997)
chr5 (149-193)||(16028634-16028678)
chr5 (149-193)||(24448971-24449015)
chr5 (149-193)||(32703503-32703547)
chr5 (149-193)||(43574687-43574731)
chr5 (150-193)||(21784343-21784386)
chr5 (158-211)||(10306493-10306546)
chr5 (149-202)||(10943855-10943907)
chr5 (152-193)||(19142956-19142997)
chr5 (149-190)||(32354211-32354252)
chr5 (149-193)||(4619114-4619158)
chr5 (149-193)||(7368477-7368521)
chr5 (149-193)||(13801777-13801821)
chr5 (149-193)||(16880657-16880701)
chr5 (149-193)||(30877574-30877618)
chr5 (149-193)||(34154824-34154868)
chr5 (149-193)||(39801597-39801641)
chr5 (149-193)||(41014399-41014443)
chr5 (149-193)||(43334286-43334329)
[»] chr1 (29 HSPs)
chr1 (148-193)||(27474384-27474429)
chr1 (149-193)||(4349742-4349786)
chr1 (149-193)||(4587573-4587617)
chr1 (149-193)||(50606507-50606551)
chr1 (149-190)||(14617145-14617186)
chr1 (149-193)||(18944749-18944794)
chr1 (142-191)||(19701677-19701726)
chr1 (146-195)||(25554749-25554798)
chr1 (148-193)||(35253196-35253241)
chr1 (148-193)||(42304216-42304261)
chr1 (149-193)||(10668331-10668375)
chr1 (149-193)||(34725108-34725152)
chr1 (149-193)||(35005229-35005273)
chr1 (149-193)||(45402200-45402244)
chr1 (149-193)||(46247963-46248007)
chr1 (149-193)||(46991908-46991952)
chr1 (150-193)||(6925204-6925247)
chr1 (150-193)||(30395737-30395780)
chr1 (142-193)||(33594134-33594185)
chr1 (149-191)||(9939570-9939612)
chr1 (149-195)||(23796567-23796613)
chr1 (152-193)||(12126850-12126891)
chr1 (149-193)||(10378745-10378789)
chr1 (149-193)||(18741967-18742011)
chr1 (149-193)||(19414541-19414585)
chr1 (149-193)||(20004100-20004144)
chr1 (153-193)||(27201753-27201793)
chr1 (149-193)||(30555219-30555263)
chr1 (151-211)||(45264411-45264471)
[»] scaffold0057 (3 HSPs)
scaffold0057 (149-193)||(46912-46956)
scaffold0057 (153-211)||(46721-46779)
scaffold0057 (153-193)||(24786-24826)
[»] chr6 (13 HSPs)
chr6 (149-193)||(29355865-29355909)
chr6 (149-193)||(12221924-12221969)
chr6 (149-202)||(26097230-26097283)
chr6 (149-193)||(1347043-1347087)
chr6 (149-193)||(1354767-1354811)
chr6 (149-193)||(6808476-6808520)
chr6 (149-193)||(12892090-12892134)
chr6 (149-193)||(14975100-14975144)
chr6 (150-193)||(23930138-23930181)
chr6 (149-192)||(25557805-25557848)
chr6 (149-191)||(10734915-10734957)
chr6 (149-193)||(11395842-11395886)
chr6 (149-193)||(12885994-12886038)
[»] chr3 (29 HSPs)
chr3 (149-193)||(13628800-13628844)
chr3 (149-193)||(40272822-40272866)
chr3 (149-193)||(54484794-54484838)
chr3 (149-203)||(516505-516559)
chr3 (149-202)||(1217182-1217235)
chr3 (149-193)||(353359-353403)
chr3 (149-193)||(10484626-10484670)
chr3 (149-193)||(13730612-13730656)
chr3 (149-193)||(24851311-24851355)
chr3 (149-193)||(30452898-30452942)
chr3 (149-193)||(34771374-34771418)
chr3 (149-193)||(39203617-39203661)
chr3 (149-193)||(45948848-45948892)
chr3 (151-206)||(54374357-54374412)
chr3 (149-211)||(829452-829514)
chr3 (149-191)||(5173729-5173771)
chr3 (149-187)||(47624208-47624246)
chr3 (152-193)||(29366733-29366774)
chr3 (149-193)||(46421044-46421089)
chr3 (150-202)||(6411833-6411885)
chr3 (149-193)||(14987062-14987106)
chr3 (149-193)||(15797323-15797367)
chr3 (149-193)||(22122927-22122971)
chr3 (149-193)||(22609868-22609912)
chr3 (149-193)||(25517180-25517224)
chr3 (149-189)||(31592954-31592994)
chr3 (149-193)||(45786224-45786268)
chr3 (149-193)||(49013483-49013527)
chr3 (149-189)||(52926229-52926269)
[»] chr7 (18 HSPs)
chr7 (143-193)||(21566517-21566567)
chr7 (151-192)||(45018935-45018976)
chr7 (149-193)||(2541029-2541073)
chr7 (149-193)||(7879719-7879763)
chr7 (149-193)||(21172019-21172063)
chr7 (149-193)||(32758340-32758384)
chr7 (149-193)||(35334826-35334870)
chr7 (149-193)||(42391110-42391154)
chr7 (149-193)||(42805607-42805651)
chr7 (149-193)||(48735132-48735176)
chr7 (151-190)||(42495874-42495913)
chr7 (148-202)||(38262205-38262259)
chr7 (152-193)||(10693086-10693127)
chr7 (152-193)||(18512466-18512507)
chr7 (149-193)||(18747568-18747612)
chr7 (149-193)||(27889326-27889370)
chr7 (149-193)||(31591119-31591163)
chr7 (149-193)||(47716542-47716586)
[»] scaffold0311 (1 HSPs)
scaffold0311 (152-193)||(10891-10932)
[»] scaffold0180 (1 HSPs)
scaffold0180 (148-193)||(24142-24187)
[»] scaffold0168 (1 HSPs)
scaffold0168 (149-193)||(30658-30702)
[»] scaffold0015 (1 HSPs)
scaffold0015 (149-193)||(48644-48688)
[»] scaffold1176 (1 HSPs)
scaffold1176 (151-202)||(1599-1650)
[»] scaffold0018 (1 HSPs)
scaffold0018 (151-192)||(72879-72920)
[»] scaffold0258 (1 HSPs)
scaffold0258 (149-193)||(13034-13078)


Alignment Details
Target: chr2 (Bit Score: 166; Significance: 5e-89; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 21 - 211
Target Start/End: Complemental strand, 17471805 - 17471613
Alignment:
Q  21 tatgcttcattcacctttcaaatttctgaattgcttgctctttaccaagtaagtattaagcacttatagatggtat--gctgttaataataaaagatgaa 118  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  17471805 tatgcttccttcacctttcaaatttctgaattgcttgctctttaccaagtaagtattaagcacttatagatggtatatgctgttaataataaaagatgaa 17471706  T
Q  119 agaaagttaaagtactttcataggggtagtccggtgcactaaaactcccgcataggcagggtccgggaaggggtctcgtcattttggtatatt 211  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  17471705 agaaagttaaagtaatttcataggggtagtccggtgcactaaaactcccgcataggcagggtcagggaaggggtctcatcattttggtatatt 17471613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 34080226 - 34080182
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  34080226 ccggtgcactaaaactcccgcatatgcagggtccgggaaggggtc 34080182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 9671304 - 9671260
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  9671304 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 9671260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 10543825 - 10543781
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  10543825 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 10543781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 10546288 - 10546244
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  10546288 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 10546244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 14530445 - 14530401
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  14530445 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 14530401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 14444851 - 14444809
Alignment:
Q  151 ggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  14444851 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 14444809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 3633719 - 3633764
Alignment:
Q  150 cggtgcactaaaactcccgcataggcagggtccgggaaggggtctc 195  Q
    |||||||||||| |||||||||| || |||||||||||||||||||    
T  3633719 cggtgcactaaagctcccgcatatgcggggtccgggaaggggtctc 3633764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 8455326 - 8455370
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||    
T  8455326 ccggtgcactaaagctccggcatacgcagggtccgggaaggggtc 8455370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 21779271 - 21779315
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  21779271 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtc 21779315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 23488608 - 23488564
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| ||| |||||| ||||||||||||||||||||    
T  23488608 ccggtgcactaaagctctcgcatacgcagggtccgggaaggggtc 23488564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 24859997 - 24860041
Alignment:
Q  148 tccggtgcactaaaactcccgcataggcagggtccgggaaggggt 192  Q
    |||||||||||||| |||||||||| |||||||||| ||||||||    
T  24859997 tccggtgcactaaagctcccgcatacgcagggtccgagaaggggt 24860041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 34766376 - 34766336
Alignment:
Q  153 tgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  34766376 tgcactaaagctcccgcatacgcagggtccgggaaggggtc 34766336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 40579759 - 40579803
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||    
T  40579759 ccggtgcactaaagctcccgcatactcagggtccgggaaggggtc 40579803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 41409987 - 41409943
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||| || |||||||||| ||||||||||||||||||||    
T  41409987 ccggtgcactgaagctcccgcatatgcagggtccgggaaggggtc 41409943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 193
Target Start/End: Complemental strand, 5841154 - 5841111
Alignment:
Q  150 cggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||||| |||||||||| || |||||||||||||||||    
T  5841154 cggtgcactaaagctcccgcatatgcggggtccgggaaggggtc 5841111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 187
Target Start/End: Original strand, 124924 - 124962
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaa 187  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  124924 ccggtgcactaaagctcccgcatacgcagggtccgggaa 124962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 8576018 - 8575976
Alignment:
Q  151 ggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||    
T  8576018 ggtgcactaaagctcccacatacgcagggtccgggaaggggtc 8575976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 190
Target Start/End: Complemental strand, 11514561 - 11514519
Alignment:
Q  148 tccggtgcactaaaactcccgcataggcagggtccgggaaggg 190  Q
    |||||||||||||| |||||||||| |||||||| ||||||||    
T  11514561 tccggtgcactaaagctcccgcatacgcagggtctgggaaggg 11514519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 14544189 - 14544147
Alignment:
Q  151 ggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| |||||||||| ||||||||| ||||||||||    
T  14544189 ggtgcactaaagctcccgcatacgcagggtcccggaaggggtc 14544147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 187
Target Start/End: Complemental strand, 22371237 - 22371199
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaa 187  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  22371237 ccggtgcactaaagctcccgcatacgcagggtccgggaa 22371199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 24890533 - 24890492
Alignment:
Q  152 gtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||| |||| ||||| ||||||||||||||||||||    
T  24890533 gtgcactaaagctcctgcatacgcagggtccgggaaggggtc 24890492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 25079727 - 25079771
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||  ||||| ||||||||||||||||||||    
T  25079727 ccggtgcactaaagctcttgcatacgcagggtccgggaaggggtc 25079771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 36871616 - 36871573
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||||    
T  36871616 ccggtgcactaaagctcccgcatacgca-ggtccgggaaggggtc 36871573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 44643648 - 44643604
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||  |||||||||| |||||||| |||||||||||    
T  44643648 ccggtgcactaaggctcccgcatacgcagggtctgggaaggggtc 44643604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 20284079 - 20284123
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  20284079 ccggtgcactaaaactcccgcatacgcagggtccgggaaggggtc 20284123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 21070707 - 21070751
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  21070707 ccggtgcactaaaactcccgcatacgcagggtccgggaaggggtc 21070751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 39461004 - 39461050
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtctc 195  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  39461004 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctc 39461050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 16013581 - 16013537
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||    
T  16013581 ccggtgcactaaagctcccgcataggcagggtctgggaaggggtc 16013537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 7136537 - 7136581
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| || |||||||||||||||||    
T  7136537 ccggtgcactaaagctcccgcatatgcggggtccgggaaggggtc 7136581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 12626015 - 12625971
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||    
T  12626015 ccggtgcactaaagctcccgcatacgcagggtccgggagggggtc 12625971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 12670260 - 12670304
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  12670260 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtc 12670304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 18595959 - 18595919
Alignment:
Q  153 tgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  18595959 tgcactaaaactcccgcatacacagggtccgggaaggggtc 18595919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 26102642 - 26102598
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  26102642 ccggtgcactagagctcccgcataagcagggtccgggaaggggtc 26102598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 27508035 - 27507991
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||    
T  27508035 ccggtgcactaaagctcccgcatacgcagggttcgggaaggggtc 27507991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 28817640 - 28817680
Alignment:
Q  153 tgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  28817640 tgcactaaagctcccgcatacgcagggtccgggaaggggtc 28817680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 30454107 - 30454151
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  30454107 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtc 30454151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 35261804 - 35261760
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||    
T  35261804 ccggtgcactaaagctcccgcatacgcagggtccaggaaggggtc 35261760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 44530274 - 44530230
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||    
T  44530274 ccggtgcactaaagctcccgcatacgcagggtccaggaaggggtc 44530230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 27468102 - 27468141
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaag 188  Q
    ||||||||||||| |||||||||| |||||||||||||||    
T  27468102 ccggtgcactaaagctcccgcatacgcagggtccgggaag 27468141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 8897776 - 8897818
Alignment:
Q  151 ggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||| |||| |||||||||| ||||||||||||||||||||    
T  8897776 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtc 8897818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 187
Target Start/End: Original strand, 18164770 - 18164808
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaa 187  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  18164770 ccggtgcactaaagctcccgcatacgcagggtccgggaa 18164808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 29877217 - 29877175
Alignment:
Q  151 ggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||  |||||||||| ||||||||||||||||||||    
T  29877217 ggtgcactaacgctcccgcatacgcagggtccgggaaggggtc 29877175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 36720919 - 36720877
Alignment:
Q  151 ggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| || ||||||| ||||||||||||||||||||    
T  36720919 ggtgcactaaagcttccgcatacgcagggtccgggaaggggtc 36720877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 190
Target Start/End: Complemental strand, 16225146 - 16225105
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggg 190  Q
    ||||||||||||| |||||||||| || ||||||||||||||    
T  16225146 ccggtgcactaaagctcccgcatatgcggggtccgggaaggg 16225105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 2677665 - 2677621
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||||||||  ||||||| |||||||||| |||||||||    
T  2677665 ccggtgcactaaaacatccgcatacgcagggtccgagaaggggtc 2677621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 6760949 - 6760905
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| || ||||||| |||||||||    
T  6760949 ccggtgcactaaagctcccgcatatgcggggtccgagaaggggtc 6760905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 13160826 - 13160782
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||| ||||| || |||||||||| ||||||||||||||||||||    
T  13160826 ccggcgcactgaagctcccgcatacgcagggtccgggaaggggtc 13160782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 20869524 - 20869556
Alignment:
Q  163 ctcccgcataggcagggtccgggaaggggtctc 195  Q
    |||||||||| ||||||||||||||||||||||    
T  20869524 ctcccgcatatgcagggtccgggaaggggtctc 20869556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 20870050 - 20870006
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| || |||||| ||||||||||    
T  20870050 ccggtgcactaaagctcccgcatatgcggggtcctggaaggggtc 20870006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 25250649 - 25250605
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| || |||| ||||||||||||    
T  25250649 ccggtgcactaaatctcccgcatatgcggggttcgggaaggggtc 25250605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 28407528 - 28407484
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||| |||| |||||||||| | ||||||||||||||||||    
T  28407528 ccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtc 28407484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 45071389 - 45071345
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||| || |||||||||| ||| ||||||||||||||||    
T  45071389 ccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtc 45071345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 20639668 - 20639730
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtctcgtcattttggtatatt 211  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| |  ||||||||| ||||    
T  20639668 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtatt 20639730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 23501914 - 23501870
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  23501914 ccggtgcactaaagctcccgcatatgcagggtccgggaaggggtc 23501870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 32484358 - 32484314
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  32484358 ccggtgcactaaagctcccgcatatgcagggtccgggaaggggtc 32484314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 38755918 - 38755962
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  38755918 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 38755962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 40553947 - 40553991
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  40553947 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 40553991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 44363140 - 44363184
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  44363140 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 44363184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 195
Target Start/End: Complemental strand, 30639501 - 30639458
Alignment:
Q  152 gtgcactaaaactcccgcataggcagggtccgggaaggggtctc 195  Q
    |||||||||| |||||||||| ||||||||||||||||||||||    
T  30639501 gtgcactaaagctcccgcatatgcagggtccgggaaggggtctc 30639458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 50555666 - 50555709
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggt 192  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  50555666 ccggtgcactaaaactcctgcatacgcagggtccgggaaggggt 50555709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 30690188 - 30690230
Alignment:
Q  151 ggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  30690188 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 30690230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 54730376 - 54730334
Alignment:
Q  150 cggtgcactaaaactcccgcataggcagggtccgggaaggggt 192  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  54730376 cggtgcactaaagctcccgcatacgcagggtccgggaaggggt 54730334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 51865045 - 51865090
Alignment:
Q  146 agtccggtgcactaaaactcccgcataggcagggtccgggaagggg 191  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||    
T  51865045 agtccggtgcaataaagctcccgcatacgcagggtccgggaagggg 51865090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 11394977 - 11394933
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||    
T  11394977 ccggtgcactaaagctcccgcatacgcagggtccggaaaggggtc 11394933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 11404704 - 11404660
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||    
T  11404704 ccggtgcactaaagctcccgcatacgcagggtccggaaaggggtc 11404660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 20225107 - 20225063
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  20225107 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtc 20225063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 20225201 - 20225157
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| || |||||||||||||||||    
T  20225201 ccggtgcactaaagctcccgcatatgcggggtccgggaaggggtc 20225157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 25629174 - 25629130
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||    
T  25629174 ccggtgcactaaagctcccgcatatgtagggtccgggaaggggtc 25629130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 29207908 - 29207952
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  29207908 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtc 29207952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 33836501 - 33836541
Alignment:
Q  153 tgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  33836501 tgcactaaagctcccgcatacgcagggtccgggaaggggtc 33836541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 35532117 - 35532077
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaagg 189  Q
    ||||||||||||| |||||||||| ||||||||||||||||    
T  35532117 ccggtgcactaaagctcccgcatacgcagggtccgggaagg 35532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 38786734 - 38786690
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  38786734 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtc 38786690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 11054158 - 11054201
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggt 192  Q
    ||||||||||| | |||||||||| |||||||||||||||||||    
T  11054158 ccggtgcactagagctcccgcatatgcagggtccgggaaggggt 11054201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 16408611 - 16408654
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggt 192  Q
    ||||||||||||| |||||||||| || ||||||||||||||||    
T  16408611 ccggtgcactaaagctcccgcatatgcggggtccgggaaggggt 16408654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 211
Target Start/End: Original strand, 20908649 - 20908708
Alignment:
Q  152 gtgcactaaaactcccgcataggcagggtccgggaaggggtctcgtcattttggtatatt 211  Q
    |||||||||| |||||||||| ||||||| |||||||||||| |  ||||||||| ||||    
T  20908649 gtgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgtatt 20908708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 30352591 - 30352634
Alignment:
Q  150 cggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||||| |||||||||| |||||||||| |||||||||    
T  30352591 cggtgcactaaagctcccgcatacgcagggtccgagaaggggtc 30352634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 54175190 - 54175127
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtcc-gggaaggggtctcgtcattttggtatatt 211  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||| |  ||||||||| ||||    
T  54175190 ccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttggtgtatt 54175127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 14983953 - 14983915
Alignment:
Q  155 cactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  14983953 cactaaagctcccgcatacgcagggtccgggaaggggtc 14983915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 190
Target Start/End: Complemental strand, 40915954 - 40915912
Alignment:
Q  148 tccggtgcactaaaactcccgcataggcagggtccgggaaggg 190  Q
    ||||||||||| || |||||||||| |||||||||||||||||    
T  40915954 tccggtgcactgaagctcccgcatacgcagggtccgggaaggg 40915912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 5648380 - 5648339
Alignment:
Q  152 gtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||| || |||||||||| ||||||||||||||||||||    
T  5648380 gtgcactgaagctcccgcatacgcagggtccgggaaggggtc 5648339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 6430636 - 6430680
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||| ||||| |||||||||| ||||||||||||||| ||||    
T  6430636 ccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtc 6430680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 8820629 - 8820589
Alignment:
Q  153 tgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||| |||||||| |||||||||||    
T  8820629 tgcactaaaactctcgcatacgcagggtctgggaaggggtc 8820589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 10277766 - 10277810
Alignment:
Q  148 tccggtgcactaaaactcccgcataggcagggtccgggaaggggt 192  Q
    |||||| ||||| |||||||||||| |||||||| ||||||||||    
T  10277766 tccggttcactagaactcccgcatatgcagggtctgggaaggggt 10277810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 20405210 - 20405170
Alignment:
Q  153 tgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||| |||||||||| || |||||||||||||||||    
T  20405210 tgcactaaagctcccgcatatgcggggtccgggaaggggtc 20405170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 21647091 - 21647047
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| || ||||| |||||||||||    
T  21647091 ccggtgcactaaagctcccgcatatgcggggtctgggaaggggtc 21647047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 25388301 - 25388257
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||  ||||| ||||||||||||||||||||    
T  25388301 ccggtgcactaaagctcatgcatacgcagggtccgggaaggggtc 25388257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 35567295 - 35567251
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||| | ||||||| ||||||||||||    
T  35567295 ccggtgcactaaagctcccgcagacgcagggttcgggaaggggtc 35567251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 47482864 - 47482904
Alignment:
Q  153 tgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||| ||| |||||||||| ||||||||||||||||||||    
T  47482864 tgcaccaaagctcccgcatacgcagggtccgggaaggggtc 47482904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 193
Target Start/End: Complemental strand, 25622586 - 25622541
Alignment:
Q  148 tccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||    
T  25622586 tccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 25622541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 8169994 - 8170038
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  8169994 ccggtgcactgaaactcccgcatatgcagggtccgggaaggggtc 8170038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 16957439 - 16957395
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  16957439 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 16957395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 38879708 - 38879664
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  38879708 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 38879664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 12006339 - 12006382
Alignment:
Q  150 cggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||||| ||||||||||||||||||| |||||||||||    
T  12006339 cggtgcactaaagctcccgcataggcagggtctgggaaggggtc 12006382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 195
Target Start/End: Original strand, 7097772 - 7097816
Alignment:
Q  151 ggtgcactaaaactcccgcataggcagggtccgggaaggggtctc 195  Q
    ||||||||||| |||||||||| ||||||| ||||||||||||||    
T  7097772 ggtgcactaaagctcccgcatacgcagggttcgggaaggggtctc 7097816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 13774997 - 13774949
Alignment:
Q  142 gggtagtccggtgcactaaaactcccgcataggcagggtccgggaaggg 190  Q
    |||||| ||||||||||||| |||||||||| ||||||||||| |||||    
T  13774997 gggtagcccggtgcactaaagctcccgcatacgcagggtccggaaaggg 13774949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 16028634 - 16028678
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  16028634 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtc 16028678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 24449015 - 24448971
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||    
T  24449015 ccggtgcactaaagctcctgcatacgcagggtccgggaaggggtc 24448971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 32703547 - 32703503
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  32703547 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtc 32703503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 43574731 - 43574687
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||    
T  43574731 ccggtgctctaaagctcccgcatacgcagggtccgggaaggggtc 43574687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 21784343 - 21784386
Alignment:
Q  150 cggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||||| |||||||||| ||||||||||| ||||||||    
T  21784343 cggtgcactaaacctcccgcatacgcagggtccggaaaggggtc 21784386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 10306493 - 10306546
Alignment:
Q  158 taaaactcccgcataggcagggtccgggaaggggtctcgtcattttggtatatt 211  Q
    |||| |||||||||| |||||||||||||||||||| |  ||||||||| ||||    
T  10306493 taaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtatt 10306546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 10943855 - 10943907
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtctcgtcattt 202  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||| ||| ||||    
T  10943855 ccggtgcactaaagctcccgcattg-cagggtccgggaaggggtcccgttattt 10943907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 19142956 - 19142997
Alignment:
Q  152 gtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||| |||||||||| ||| ||||||||||||||||    
T  19142956 gtgcactaaatctcccgcatacgcatggtccgggaaggggtc 19142997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 190
Target Start/End: Complemental strand, 32354252 - 32354211
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggg 190  Q
    ||||||||||||| ||||||||||  ||||||||||||||||    
T  32354252 ccggtgcactaaagctcccgcatacacagggtccgggaaggg 32354211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 4619114 - 4619158
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| ||| |||||| || |||||||||||||||||    
T  4619114 ccggtgcactaaagctctcgcatatgcggggtccgggaaggggtc 4619158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 7368521 - 7368477
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | ||||| |||| ||||||||||||||||||||    
T  7368521 ccggtgcactagagctcccacatatgcagggtccgggaaggggtc 7368477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 13801777 - 13801821
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| ||| |||||| || |||||||||||||||||    
T  13801777 ccggtgcactaaagctctcgcatatgcggggtccgggaaggggtc 13801821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 16880657 - 16880701
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||| ||||||||||| ||||    
T  16880657 ccggtgcactaaagctcccgcatacgcatggtccgggaagtggtc 16880701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 30877574 - 30877618
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | ||||| |||| ||||||||||||||||||||    
T  30877574 ccggtgcactagagctcccacatatgcagggtccgggaaggggtc 30877618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 34154824 - 34154868
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | || ||||||| ||||||||||||||||||||    
T  34154824 ccggtgcactagagctaccgcatatgcagggtccgggaaggggtc 34154868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 39801641 - 39801597
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| | |||||| |||||||||||    
T  39801641 ccggtgcactaaagctcccgcatacgtagggtctgggaaggggtc 39801597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 41014443 - 41014399
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| || |||||| ||||||||||    
T  41014443 ccggtgcactaaagctcccgcatatgcggggtccaggaaggggtc 41014399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 43334329 - 43334286
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| ||||||||| | |||||||||||||||||||    
T  43334329 ccggtgcactaaagctcccgcatcg-cagggtccgggaaggggtc 43334286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 193
Target Start/End: Complemental strand, 27474429 - 27474384
Alignment:
Q  148 tccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||    
T  27474429 tccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 27474384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 4349786 - 4349742
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  4349786 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 4349742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 4587573 - 4587617
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||| || |||||||||||||||||||||||||||||||    
T  4587573 ccggtgcactgaagctcccgcataggcagggtccgggaaggggtc 4587617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 50606551 - 50606507
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  50606551 ccggtgcactaaagctcccgcatatgcagggtccgggaaggggtc 50606507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 190
Target Start/End: Complemental strand, 14617186 - 14617145
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggg 190  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  14617186 ccggtgcactaaagctcccgcatatgcagggtccgggaaggg 14617145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 18944794 - 18944749
Alignment:
Q  149 ccggtgcactaaaa-ctcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||    
T  18944794 ccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtc 18944749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 19701726 - 19701677
Alignment:
Q  142 gggtagtccggtgcactaaaactcccgcataggcagggtccgggaagggg 191  Q
    |||||| | ||||||||||| |||||||||| ||||||||||||||||||    
T  19701726 gggtagcctggtgcactaaagctcccgcatacgcagggtccgggaagggg 19701677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 25554749 - 25554798
Alignment:
Q  146 agtccggtgcactaaaactcccgcataggcagggtccgggaaggggtctc 195  Q
    |||||||||||||||  |||||||||| ||||||| ||||||||||||||    
T  25554749 agtccggtgcactaatgctcccgcatacgcagggttcgggaaggggtctc 25554798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 35253196 - 35253241
Alignment:
Q  148 tccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||||| | |||||||||| ||||||||||||||||||||    
T  35253196 tccggtgcactagagctcccgcatatgcagggtccgggaaggggtc 35253241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 42304216 - 42304261
Alignment:
Q  148 tccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||||||| ||||| |||| ||||||||||||||||||||    
T  42304216 tccggtgcactaaagctcccacatacgcagggtccgggaaggggtc 42304261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 10668375 - 10668331
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||    
T  10668375 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggtc 10668331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 34725108 - 34725152
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  34725108 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtc 34725152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 35005273 - 35005229
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||    
T  35005273 ccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtc 35005229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 45402244 - 45402200
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| |||||||| |||||||||||    
T  45402244 ccggtgcactaaagctcccgcatacgcagggtctgggaaggggtc 45402200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 46247963 - 46248007
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||||    
T  46247963 ccggtacactaaagctcccgcatacgcagggtccgggaaggggtc 46248007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 46991952 - 46991908
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||||    
T  46991952 ccggtgcactaaagctcccacatacgcagggtccgggaaggggtc 46991908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 193
Target Start/End: Complemental strand, 6925247 - 6925204
Alignment:
Q  150 cggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||||| |||||||||| |||||| |||||||||||||    
T  6925247 cggtgcactaaagctcccgcatacgcagggaccgggaaggggtc 6925204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 30395737 - 30395780
Alignment:
Q  150 cggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||||| |||||||||| || |||||||||||||||||    
T  30395737 cggtgcactaaagctcccgcatatgcggggtccgggaaggggtc 30395780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 33594134 - 33594185
Alignment:
Q  142 gggtagtccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||| || |||||||||| |||||||||| |||||||| |||||||||||    
T  33594134 gggtagcccagtgcactaaagctcccgcatacgcagggtctgggaaggggtc 33594185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 9939612 - 9939570
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaagggg 191  Q
    ||||||||||||| |||||||||| |||||||||| |||||||    
T  9939612 ccggtgcactaaagctcccgcatacgcagggtccgagaagggg 9939570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 23796613 - 23796567
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtctc 195  Q
    ||||||||||||| |||| ||||| |||||||| |||||||||||||    
T  23796613 ccggtgcactaaagctccagcatatgcagggtctgggaaggggtctc 23796567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 12126850 - 12126891
Alignment:
Q  152 gtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||| | |||||||||| ||||||||||||||||||||    
T  12126850 gtgcactacagctcccgcatatgcagggtccgggaaggggtc 12126891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 10378745 - 10378789
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| |||||||||  |||||||||    
T  10378745 ccggtgcactaaagctcccgcatatgcagggtccaagaaggggtc 10378789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 18741967 - 18742011
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| ||| |||||| |||||||| |||||||||||    
T  18741967 ccggtgcactaaagctctcgcatacgcagggtctgggaaggggtc 18742011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 19414585 - 19414541
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||||||| ||||||||||||    
T  19414585 ccggtgcactagagctcccgcatatgcagggtacgggaaggggtc 19414541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 20004100 - 20004144
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| || ||||| |||||||||||    
T  20004100 ccggtgcactaaagctcccgcatatgcggggtctgggaaggggtc 20004144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 27201793 - 27201753
Alignment:
Q  153 tgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||| |||||||||| ||| ||||||||||||||||    
T  27201793 tgcactaaagctcccgcatacgcaaggtccgggaaggggtc 27201753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 30555263 - 30555219
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| ||| |||||| |||||||||| |||||||||    
T  30555263 ccggtgcactaaagctctcgcatacgcagggtccgtgaaggggtc 30555219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 45264411 - 45264471
Alignment:
Q  151 ggtgcactaaaactcccgcataggcagggtccgggaaggggtctcgtcattttggtatatt 211  Q
    ||||||||||| |||||||||| |||||||| | ||||||||| |  ||||||||| ||||    
T  45264411 ggtgcactaaagctcccgcatatgcagggtctgagaaggggtcccaccattttggtgtatt 45264471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 46956 - 46912
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  46956 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 46912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 46721 - 46779
Alignment:
Q  153 tgcactaaaactcccgcataggcagggtccgggaaggggtctcgtcattttggtatatt 211  Q
    |||| |||| |||||||||| |||||||| ||||||||||| |  ||||||||||||||    
T  46721 tgcattaaagctcccgcatacgcagggtctgggaaggggtcccaccattttggtatatt 46779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 24786 - 24826
Alignment:
Q  153 tgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||| |||||||||| ||||||| ||||||||||||    
T  24786 tgcactaaagctcccgcatacgcagggttcgggaaggggtc 24826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 29355865 - 29355909
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  29355865 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 29355909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 12221924 - 12221969
Alignment:
Q  149 ccggtgcactaaaa-ctcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||    
T  12221924 ccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtc 12221969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 26097283 - 26097230
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtctcgtcattt 202  Q
    ||||||||||| | |||||||||| |||||||||||||||||||| | ||||||    
T  26097283 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttcattt 26097230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 1347087 - 1347043
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  1347087 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtc 1347043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 1354767 - 1354811
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  1354767 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtc 1354811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 6808520 - 6808476
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||    
T  6808520 ccggtgcactaaagctcccgcatacacagggtccgggaaggggtc 6808476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 12892134 - 12892090
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| || |||||||||||||||||    
T  12892134 ccggtgcactaaagctcccgcatatgcggggtccgggaaggggtc 12892090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 14975100 - 14975144
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||||||||||||||||| || |||| ||||||||||||    
T  14975100 ccggtgcactaaaactcccgcatatgcggggttcgggaaggggtc 14975144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 23930138 - 23930181
Alignment:
Q  150 cggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||||| |||||||||| |||||||||| |||||||||    
T  23930138 cggtgcactaaagctcccgcataagcagggtccgtgaaggggtc 23930181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 25557848 - 25557805
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggt 192  Q
    ||||||||||| | |||||||||| |||||||||||||||||||    
T  25557848 ccggtgcactagagctcccgcatatgcagggtccgggaaggggt 25557805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 10734915 - 10734957
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaagggg 191  Q
    |||||| |||||| |||||||||| ||||||||||||||||||    
T  10734915 ccggtggactaaagctcccgcatacgcagggtccgggaagggg 10734957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 11395886 - 11395842
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||| |||||| |||||||||| ||||| ||||||||||||||    
T  11395886 ccggtggactaaagctcccgcatacgcaggatccgggaaggggtc 11395842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 12886038 - 12885994
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| ||||| |||| |||||||| |||||||||||    
T  12886038 ccggtgcactaaagctcccacatacgcagggtctgggaaggggtc 12885994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000005; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 13628800 - 13628844
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  13628800 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 13628844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 40272822 - 40272866
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  40272822 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 40272866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 54484838 - 54484794
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  54484838 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 54484794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 516559 - 516505
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtctcgtcatttt 203  Q
    ||||||||||||| |||||||||| |||||||| ||||||||||| || ||||||    
T  516559 ccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccatttt 516505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 1217235 - 1217182
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtctcgtcattt 202  Q
    ||||||||||| | |||||||||| |||||||||||||||||||| || |||||    
T  1217235 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccattt 1217182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 353359 - 353403
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| || |||||||||||||||||    
T  353359 ccggtgcactaaagctcccgcatatgcggggtccgggaaggggtc 353403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 10484626 - 10484670
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||    
T  10484626 ccggtgcactaaagctcccgcatacgcagggtccaggaaggggtc 10484670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 13730612 - 13730656
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| || |||||||||||||||||    
T  13730612 ccggtgcactaaagctcccgcatatgcggggtccgggaaggggtc 13730656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 24851311 - 24851355
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||||    
T  24851311 ccggtgcactaaagctcccgcatatgcaggatccgggaaggggtc 24851355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 30452942 - 30452898
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  30452942 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtc 30452898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 34771374 - 34771418
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  34771374 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtc 34771418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 39203661 - 39203617
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||||    
T  39203661 ccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtc 39203617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 45948848 - 45948892
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| |||||||||| |||||||||    
T  45948848 ccggtgcactaaagctcccgcatacgcagggtccgagaaggggtc 45948892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 54374357 - 54374412
Alignment:
Q  151 ggtgcactaaaactcccgcataggcagggtccgggaaggggtctcgtcattttggt 206  Q
    |||| |||||| |||||||||| |||||||||||||||||||| |  |||||||||    
T  54374357 ggtgaactaaagctcccgcatatgcagggtccgggaaggggtcccaccattttggt 54374412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 829452 - 829514
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtctcgtcattttggtatatt 211  Q
    ||||||||||||| |||| ||||| ||||||| |||||||||||| |  ||||||||| ||||    
T  829452 ccggtgcactaaagctcctgcatacgcagggttcgggaaggggtcccaccattttggtgtatt 829514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 5173729 - 5173771
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaagggg 191  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||    
T  5173729 ccggtgcactaaagctcccgcatacgcaaggtccgggaagggg 5173771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 187
Target Start/End: Complemental strand, 47624246 - 47624208
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaa 187  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  47624246 ccggtgcactaaagctcccgcatacgcagggtccgggaa 47624208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 29366733 - 29366774
Alignment:
Q  152 gtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||| ||||| |||| ||||||||||||||||||||    
T  29366733 gtgcactaaagctcccacatacgcagggtccgggaaggggtc 29366774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 46421044 - 46421089
Alignment:
Q  149 ccggtgcactaaaa-ctcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||    
T  46421044 ccggtgcacttaaagctcccgcatacgcagggtccgggaaggggtc 46421089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 6411833 - 6411885
Alignment:
Q  150 cggtgcactaaaactcccgcataggcagggtccgggaaggggtctcgtcattt 202  Q
    |||||||||||| |||||||||| ||| |||| ||||||||||| | ||||||    
T  6411833 cggtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatcattt 6411885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 14987106 - 14987062
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||| |||||||||| |||||    
T  14987106 ccggtgcactaaagctcccgcatatgcaaggtccgggaatgggtc 14987062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 15797367 - 15797323
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | ||||| |||| ||||||||||||||||||||    
T  15797367 ccggtgcactagagctcccacatatgcagggtccgggaaggggtc 15797323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 22122927 - 22122971
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | ||| |||||| ||||||||||||||||||||    
T  22122927 ccggtgcactagagctctcgcatatgcagggtccgggaaggggtc 22122971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 22609912 - 22609868
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||| || |||||||||| ||| ||||||||||||||||    
T  22609912 ccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtc 22609868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 25517180 - 25517224
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||| ||||| ||||| ||||||||||||||    
T  25517180 ccggtgcactaaagctccagcatacgcaggatccgggaaggggtc 25517224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 31592994 - 31592954
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaagg 189  Q
    ||||||||||| | |||||||||| ||||||||||||||||    
T  31592994 ccggtgcactagagctcccgcatatgcagggtccgggaagg 31592954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 45786224 - 45786268
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||| ||||  ||||||||||||||||||||    
T  45786224 ccggtgcactaaagctccagcattcgcagggtccgggaaggggtc 45786268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 49013483 - 49013527
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| ||||||| || || |||||||||||||||||    
T  49013483 ccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtc 49013527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 52926229 - 52926269
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaagg 189  Q
    ||||||| ||||| |||||||||| ||||||||||||||||    
T  52926229 ccggtgcgctaaagctcccgcatacgcagggtccgggaagg 52926269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000008; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 21566567 - 21566517
Alignment:
Q  143 ggtagtccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||| ||||||||||||| |||||||||| ||||||| ||||||||||||    
T  21566567 ggtagcccggtgcactaaagctcccgcatatgcagggttcgggaaggggtc 21566517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 45018935 - 45018976
Alignment:
Q  151 ggtgcactaaaactcccgcataggcagggtccgggaaggggt 192  Q
    ||||||||||| |||||||||| |||||||||||||||||||    
T  45018935 ggtgcactaaagctcccgcatacgcagggtccgggaaggggt 45018976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 2541029 - 2541073
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||    
T  2541029 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggtc 2541073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 7879763 - 7879719
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||| || |||||||||| ||||||||||||||||||||    
T  7879763 ccggtgcactgaagctcccgcatacgcagggtccgggaaggggtc 7879719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 21172019 - 21172063
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  21172019 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtc 21172063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 32758384 - 32758340
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  32758384 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtc 32758340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 35334826 - 35334870
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||    
T  35334826 ccggtgcactaaagctcctgcatacgcagggtccgggaaggggtc 35334870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 42391110 - 42391154
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  42391110 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtc 42391154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 42805651 - 42805607
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| || |||||||||||||||||    
T  42805651 ccggtgcactaaagctcccgcatatgcggggtccgggaaggggtc 42805607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 48735132 - 48735176
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  48735132 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtc 48735176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 42495874 - 42495913
Alignment:
Q  151 ggtgcactaaaactcccgcataggcagggtccgggaaggg 190  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  42495874 ggtgcactaaagctcccgcatacgcagggtccgggaaggg 42495913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 38262205 - 38262259
Alignment:
Q  148 tccggtgcactaaaactcccgcataggcagggtccgggaaggggtctcgtcattt 202  Q
    |||||||||||||| |||||||||| |||| || |||||||||||| | ||||||    
T  38262205 tccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcattt 38262259  T

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Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 10693086 - 10693127
Alignment:
Q  152 gtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||| | |||||||||| ||||||||||||||||||||    
T  10693086 gtgcactagagctcccgcatatgcagggtccgggaaggggtc 10693127  T

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Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 18512466 - 18512507
Alignment:
Q  152 gtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||| ||| |||||||||| ||||||||||||||||||||    
T  18512466 gtgcaccaaagctcccgcatacgcagggtccgggaaggggtc 18512507  T

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Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 18747612 - 18747568
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| |||||||||| ||||||| | ||||||||||    
T  18747612 ccggtgcactaaagctcccgcatacgcagggttcaggaaggggtc 18747568  T

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Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 27889326 - 27889370
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||| || ||| |||||||||| ||||||||||||||||||||    
T  27889326 ccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtc 27889370  T

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Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 31591119 - 31591163
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||| ||||||||||||||||    
T  31591119 ccggtgcactagagctcccgcatatgcaaggtccgggaaggggtc 31591163  T

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Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 47716586 - 47716542
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||| ||| |||||||||| || |||||||||||||||||    
T  47716586 ccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtc 47716542  T

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Target: scaffold0311 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 10932 - 10891
Alignment:
Q  152 gtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||| |||||||||| ||||||||||||||||||||    
T  10932 gtgcactaaagctcccgcatacgcagggtccgggaaggggtc 10891  T

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Target: scaffold0180 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 24142 - 24187
Alignment:
Q  148 tccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    |||||||||||| | |||||||||| ||||||||||||||||||||    
T  24142 tccggtgcactagagctcccgcatatgcagggtccgggaaggggtc 24187  T

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Target: scaffold0168 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 30702 - 30658
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  30702 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtc 30658  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 48644 - 48688
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  48644 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtc 48688  T

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Target: scaffold1176 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 1599 - 1650
Alignment:
Q  151 ggtgcactaaaactcccgcataggcagggtccgggaaggggtctcgtcattt 202  Q
    ||||||||||| |||||||||| || ||||||||||||||||| | ||||||    
T  1599 ggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatcattt 1650  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 72879 - 72920
Alignment:
Q  151 ggtgcactaaaactcccgcataggcagggtccgggaaggggt 192  Q
    ||||||||||| |||||||||| ||||| |||||||||||||    
T  72879 ggtgcactaaagctcccgcatacgcaggttccgggaaggggt 72920  T

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Target: scaffold0258 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 13034 - 13078
Alignment:
Q  149 ccggtgcactaaaactcccgcataggcagggtccgggaaggggtc 193  Q
    ||||||||||||| | |||||||| |||||||| |||||||||||    
T  13034 ccggtgcactaaagcccccgcatacgcagggtctgggaaggggtc 13078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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