View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21074_high_29 (Length: 242)
Name: NF21074_high_29
Description: NF21074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21074_high_29 |
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Alignment Details
Target: chr3 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 44093572 - 44093797
Alignment:
| Q |
1 |
tacacccaggataaaagcaacatataaaatggcaaccaacttggtgctnnnnnnntcatcccatgtaatctaacacataattttcattctagaataatat |
100 |
Q |
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| T |
44093572 |
tacacccaggataaaagcaacatataaaatggcaaccaacttggtgctaaaaaaatcatcccatgtaatctaacacataattttcattctagaataatat |
44093671 |
T |
|
| Q |
101 |
gacatcaaaacttaagtgtgtcatcaattaatttaataaaacttcaatgaaatgtagatcagtgaatcatggattcagctcctctaaataaggaagccat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44093672 |
gacatcaaaacttaagtgtgtcatcaattaatttaataaaatttcaatgaaatgtagatcagtgaatcatggattcagctcctctaaataaggaagccat |
44093771 |
T |
|
| Q |
201 |
tttagagtctaaagtcagtattaatt |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
44093772 |
tttagagtctaaagtcagtattaatt |
44093797 |
T |
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