View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21074_high_30 (Length: 238)
Name: NF21074_high_30
Description: NF21074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21074_high_30 |
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Alignment Details
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 2610896 - 2610696
Alignment:
| Q |
22 |
gctaacaaattaattctaacatcaagtgtttgaagtgaaacactcaaacgaatttgagaatattttaattaattttttcttttaaaaaggacatgctaac |
121 |
Q |
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| T |
2610896 |
gctaacaaattaattctaacatcaagtgtttgaagtgaaacactcaaacgaatttgagaatattttaattaaatttttcttttaaaaaggacatgctaac |
2610797 |
T |
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| Q |
122 |
ctaataatctactataaagctagcatatcacaacaatagtgaagtttttgaaaaaagcatctaaggtttaattttgaaagagcaaaataagcacaaataa |
221 |
Q |
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| T |
2610796 |
ctaataatctactataaagctagcatatcacaacaatagtgaagtttttgaaaaaagcatctaaggtttaattttgaaagagcaaaataagcacaaataa |
2610697 |
T |
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| Q |
222 |
g |
222 |
Q |
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| T |
2610696 |
g |
2610696 |
T |
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