View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21074_low_1 (Length: 2112)
Name: NF21074_low_1
Description: NF21074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21074_low_1 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 1243; Significance: 0; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 1243; E-Value: 0
Query Start/End: Original strand, 15 - 1379
Target Start/End: Original strand, 5620843 - 5622206
Alignment:
| Q |
15 |
aatatggtgttggttcttgtggtccccgtgggttttatggaacaattggtaaggcttgatcttaaggtttgtttttgaggaaatacttgttccctttacc |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5620843 |
aatatggtgttggttcttgtggtccccgtgggttttatggaacaattggtaaggcttgatcttaaggtttgtttttgaggaaatacttgttccctttacc |
5620942 |
T |
|
| Q |
115 |
ttatgatgcttttcttcttccgagatgtccatcttgactgtgaagggagaatatcaaagtttttaggaacacctgattcaattctctactcttatggact |
214 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5620943 |
ttatgatgcttttcttcttcccagatgtccatcttgactgtgaagggagaatatcaaagtttttaggaacacctgattcaattctctactcttatggact |
5621042 |
T |
|
| Q |
215 |
ttccaccatgttcagtgctattcctgctttctctaaaaaaggcgatataattgtagcgtaagtatgcataacttgtctttaagtatctactatggaatct |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5621043 |
ttccaccatgttcagtgctattcctgctttctctaaaaaaggcgatataattgtagcgtaagtatgcataacttgtctttaagtatctactatggaatct |
5621142 |
T |
|
| Q |
315 |
ttttcaatttttcgtcagnnnnnnnngtccgatgacattacactggccattgataaccagataccacatgtagaactatattattggttttactttcctc |
414 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
5621143 |
ttttcaatttttcgtcagttttttttgtccgatgacattatactggccattgataaccagataccacatgtagaactatattattggttttacttacctc |
5621242 |
T |
|
| Q |
415 |
tttattaaaatggtgtaaaga-tgatccaaattcatctccatcaactttatatttcaaaatttagcgaacttaagtcacttgtaccagctgatcaatgga |
513 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5621243 |
tttattaaaatggtgtaaagaatgatccaaattcatctccatcaactttatatttcaaaatttagcgaacttaagtcacttgtaccagctgatcaatgga |
5621342 |
T |
|
| Q |
514 |
ggtgttgtttatataaatctggtgttttaagctggttcagttttcatacataaatttatatcttttaacagggatgagggagtccgctggggaatacaga |
613 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
5621343 |
ggtgttgtttatataaatctggtgttttaagctggttcagtt--catacataaatttatatcttttaacagggatgagggagtccactggggaatacaga |
5621440 |
T |
|
| Q |
614 |
atggcctttatctttctagaagcacagtggtatattttaagcacaataacatggattctttaagagaaactttagagaacattacttccaaatataagag |
713 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
5621441 |
atggcctttatctttctagaagcacagtggtatattttaagcacaataacatggattctttaagagaaactttagagaacattacttccatatataagag |
5621540 |
T |
|
| Q |
714 |
gaccaagaatttgaggcgttatattgtcattgaagctctctaccaggtagatctcgtcgttcatgcatgctgttttatttactttacacatctgtaccgt |
813 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
5621541 |
gaccaagaatttgaggcgttatattgtcattgaagctctctaccaggtagatctcatcgttcatgcatgctgttatatttactttacacatctgtactgt |
5621640 |
T |
|
| Q |
814 |
gcttccaatggagcgcgtacaacatttaggtttaaaatcaaagagctataccaattgcttgcttcttgcaacttgtggtatcggtaaattgtactatatg |
913 |
Q |
| |
|
||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5621641 |
gcttctgatggagcgtgtacaacatttaggtataaaatcaaagagctataccaattgcttgcttcttgcaacttgtggtatcggtaaattgtactatatg |
5621740 |
T |
|
| Q |
914 |
aactactatttctgcagagatattacagtaattagaaaatgaaatttgaatatgtatttatgaaggattgtagtaaacactttgagtctgttggtgttgc |
1013 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
5621741 |
aactactatttctgctgagatattacagtaattagcaaatgaaatttgaatatgtatttatgaaggattgtagtaaacactttgagtctgttggcgttgc |
5621840 |
T |
|
| Q |
1014 |
tgttatattggtgtctattgcgatgttgttccttaaaaaagtattactaatctgctacttgccctggttttctcaaccattaagttgtaatagttatttt |
1113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5621841 |
tgttatattggtgtctattgcgatgttgttccttaaaagagtattgctaatctgctacttgccctggttttctcaaccattaagttgtaatagttatttt |
5621940 |
T |
|
| Q |
1114 |
ttctgtagttgtcatactaacgacatctattatgctcataatatgccttacctgctgcatgcaaactaaaattgcttgatcagtaactattgacaattgt |
1213 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5621941 |
ttctgtagttgtcatactaacaacatctattatgctcataatatgccttacctgctgcatgcaaactaaaattgcttgatcagtaactattgacaattgt |
5622040 |
T |
|
| Q |
1214 |
ttcctcgacattttttcagaactctggccaaatagcacccttagatgagatcattaaattgaaggaaaaatatcgttttcgtattttactggatgagagc |
1313 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
5622041 |
ttcctcgacattttttcagaactctggccaaatagcacccttagatgagatcattaaattgaaggaaaaatattgttttcgtattttactggatgagagc |
5622140 |
T |
|
| Q |
1314 |
aactcatttggtgtgcttggaagttctggaagagatctcactgaacactatggagttccagtatgt |
1379 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
5622141 |
aactcatttggtgtgcttggaagttctggaagaggtctcactgaacactatggagttccagtatgt |
5622206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 625; E-Value: 0
Query Start/End: Original strand, 1434 - 2101
Target Start/End: Original strand, 5638469 - 5639137
Alignment:
| Q |
1434 |
aaataaattttaaattgtacttctgtttatgattagtggttgtgtgctgcaggttgataagttagatcttataactgctgctatgggacatgcactggcc |
1533 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5638469 |
aaataaattttaaattgtacttctgtttatgattagtggttgtgtgctgcaggttgataagttagatcttataactgctgctatgggacatgcactggcc |
5638568 |
T |
|
| Q |
1534 |
acagaaggaggattctgcacgggaagtgcaagagttatagatcaccaagtatggtagtgtcatatgtgatactgttcataaccttcttggatttccatgt |
1633 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5638569 |
acagaaggaggattctgcacgggaagtgcaagagttatagatcaccaagtatggtagtgtcatatgtgatactgttcataaccttcttggatttccatgt |
5638668 |
T |
|
| Q |
1634 |
atactgaaacactaaaagagaagaaagattgtaaatgtggaaattaagaatttacttcctccaaactcaaatttaagtnnnnnnnntagtcatggtttgt |
1733 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
5638669 |
atactgaaacactaaaagagaagaaagattgtaaatgtggaaattaagaatttacttcctccaaactcaaatttaagtaaaaaaaatagtcatggtttgt |
5638768 |
T |
|
| Q |
1734 |
ggtccataatatataagaaaattctaattaattttactggattactgttatatttcaattagtgttaaacaccactcaattaatgctctcatgaaacaag |
1833 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5638769 |
ggtccataatatataagaaaattctaattaattttactggattactgttatatttcaattagtgttaaacaccactcaattaatgctctcatgaaacaag |
5638868 |
T |
|
| Q |
1834 |
tttcaaaggaaatttagtga-gagaatgatagttcggagaatgcaattttcttattgcaccaagaaaaataagcaagcttaactaatattcttacttagt |
1932 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
5638869 |
tttcaaaggaaatttagtgaagagaatgatagttcggagaatgcaattttcttattgcaccaagaaaaataagcaaggttaactaatattcttaattagt |
5638968 |
T |
|
| Q |
1933 |
acgtatttagttaattttacttaaatttgagttcagagggagtgtttttcacggaacttctttcattttttcccccacgtttccttcattaatacctgaa |
2032 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5638969 |
acgtatttagttaattttacttaaatttgagttcggagggagtgtttttcacggaacttctttcattttttcccccacgtttccttcattaatacctgaa |
5639068 |
T |
|
| Q |
2033 |
tttgcaggtctgaactataaaatttgcatgataaagcgatgtgcataaccaagtgattggttgatgatg |
2101 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5639069 |
tttgcaggtctgaactataaaatttgcatgataaagcgatgtgcataaccaagtgattggttgatgatg |
5639137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 55; E-Value: 9e-22
Query Start/End: Original strand, 2015 - 2081
Target Start/End: Original strand, 22965261 - 22965327
Alignment:
| Q |
2015 |
ccttcattaatacctgaatttgcaggtctgaactataaaatttgcatgataaagcgatgtgcataac |
2081 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
22965261 |
ccttcattaatacctgaatttgcaggtccgaactataaaatttgcatgattaagtgatgtgcataac |
22965327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1372 - 1413
Target Start/End: Original strand, 5638407 - 5638448
Alignment:
| Q |
1372 |
cagtatgtactaaaaagttctatttgggcgtgggtgtgtata |
1413 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
5638407 |
cagtatgtactgaaaagttctatttgggcgtgggtgtgtata |
5638448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 136; Significance: 4e-70; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 136; E-Value: 4e-70
Query Start/End: Original strand, 15 - 288
Target Start/End: Complemental strand, 30635898 - 30635631
Alignment:
| Q |
15 |
aatatggtgttggttcttgtggtccccgtgggttttatggaacaattggtaaggcttga-tcttaaggtttgtttttgaggaaatacttgttccctttac |
113 |
Q |
| |
|
|||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||| | | |||| |||||||||||||||||| | ||||| ||| |
|
|
| T |
30635898 |
aatatggtgttggttcatgtggcccccgtggattttatggaacaattggtaaggctttaatattaaagtttgtttttgaggaaatgcatgttctctt--- |
30635802 |
T |
|
| Q |
114 |
cttatgatgcttttcttcttccgagatgtccatcttgactgtgaagggagaatatcaaagtttttaggaacacctgattcaattctctactcttatggac |
213 |
Q |
| |
|
||||| |||||| | | |||||| |||||||||||||||| |||||| |||| ||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
30635801 |
---atgatacttttccctgtgc-agatgtacatcttgactgtgaagcaagaatagcaaaatttttaggaacgcctgattcaattctatactcttatggac |
30635706 |
T |
|
| Q |
214 |
tttccaccatgttcagtgctattcctgctttctctaaaaaaggcgatataattgtagcgtaagtatgcataactt |
288 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
30635705 |
tttccaccatgttcagtgctattcctgctttttctaaaaaaggagatataattgtggcgtaagtatgcataactt |
30635631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 131; E-Value: 4e-67
Query Start/End: Original strand, 1227 - 1381
Target Start/End: Complemental strand, 30634741 - 30634587
Alignment:
| Q |
1227 |
tttcagaactctggccaaatagcacccttagatgagatcattaaattgaaggaaaaatatcgttttcgtattttactggatgagagcaactcatttggtg |
1326 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30634741 |
tttcagaattctggtcaaatagcacccttagatgatatcattaaattgaaggaaaaatatcggtttcgtattttactggatgagagcaactcatttggtg |
30634642 |
T |
|
| Q |
1327 |
tgcttggaagttctggaagagatctcactgaacactatggagttccagtatgtac |
1381 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
30634641 |
tgcttggaagttctggaagaggtctcactgaacactacggagttccagtatgtac |
30634587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 123; E-Value: 2e-62
Query Start/End: Original strand, 555 - 765
Target Start/End: Complemental strand, 30635428 - 30635218
Alignment:
| Q |
555 |
tttcatacataaatttatatcttttaacagggatgagggagtccgctggggaatacagaatggcctttatctttctagaagcacagtggtatattttaag |
654 |
Q |
| |
|
||||||| |||| ||| ||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| || || ||||||||| |
|
|
| T |
30635428 |
tttcatatataattttgtattttttaacagggatgaaggagtccactggggaatacagaatggcctttatctttctagaagcactgtcgtgtattttaag |
30635329 |
T |
|
| Q |
655 |
cacaataacatggattctttaagagaaactttagagaacattacttccaaatataagaggaccaagaatttgaggcgttatattgtcattgaagctctct |
754 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||| ||||||| || |||||| |||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
30635328 |
cacaatgacatggattctttagaagaaactttagagaagcttacttctaagtataagcacaccaagaatttgaggcgttatattgttgtcgaagctctct |
30635229 |
T |
|
| Q |
755 |
accaggtagat |
765 |
Q |
| |
|
||||||||||| |
|
|
| T |
30635228 |
accaggtagat |
30635218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 112; E-Value: 9e-56
Query Start/End: Original strand, 1469 - 1642
Target Start/End: Complemental strand, 30634501 - 30634326
Alignment:
| Q |
1469 |
gtggttgtgtgctgcaggttgataagttagatcttataactgctgctatgggacatgcactggccacagaaggaggattctgcacgggaagtgcaagagt |
1568 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
30634501 |
gtggtcgtgtgctgcaggttgagaagttagatcttataactgctgctatgggacatgcattggccacagaaggaggattctgcaccggaagtgcaagagt |
30634402 |
T |
|
| Q |
1569 |
tatagatcaccaagtatggtagtgtcatatgtgatactg-ttcat-aaccttcttggatttccatgtatactgaaa |
1642 |
Q |
| |
|
|||||||||||| ||||||||||||||| ||| |||||| ||||| |||| ||| |||||||| || |||||||| |
|
|
| T |
30634401 |
tatagatcaccaggtatggtagtgtcatttgtaatactgattcataaaccaacttagatttccaagtgtactgaaa |
30634326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 133; Significance: 3e-68; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 133; E-Value: 3e-68
Query Start/End: Original strand, 15 - 288
Target Start/End: Complemental strand, 21424698 - 21424432
Alignment:
| Q |
15 |
aatatggtgttggttcttgtggtccccgtgggttttatggaacaattggtaaggcttga-tcttaaggtttgtttttgaggaaatacttgttccctttac |
113 |
Q |
| |
|
|||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||| | | |||| |||||||||||||||||| | ||||| ||| |
|
|
| T |
21424698 |
aatatggtgttggttcatgtggcccccgtggattttatggaacaattggtaaggctttaatattaaagtttgtttttgaggaaatgcatgttctctt--- |
21424602 |
T |
|
| Q |
114 |
cttatgatgcttttcttcttccgagatgtccatcttgactgtgaagggagaatatcaaagtttttaggaacacctgattcaattctctactcttatggac |
213 |
Q |
| |
|
||||| |||| | | | | |||||| |||||||||||||||| |||||| |||| |||||| |||| |||||||||||||| ||||||||||||| |
|
|
| T |
21424601 |
---atgatactttccctgtgc--agatgtacatcttgactgtgaagcaagaatagcaaaatttttacgaacgcctgattcaattctatactcttatggac |
21424507 |
T |
|
| Q |
214 |
tttccaccatgttcagtgctattcctgctttctctaaaaaaggcgatataattgtagcgtaagtatgcataactt |
288 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
21424506 |
tttccaccatgttcagtgctattcctgctttttctaaaaaaggagatataattgtggcgtaagtatgcataactt |
21424432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 131; E-Value: 4e-67
Query Start/End: Original strand, 1227 - 1381
Target Start/End: Complemental strand, 21423527 - 21423373
Alignment:
| Q |
1227 |
tttcagaactctggccaaatagcacccttagatgagatcattaaattgaaggaaaaatatcgttttcgtattttactggatgagagcaactcatttggtg |
1326 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
21423527 |
tttcagaattctggtcaaatagcacccttagatgatatcattaaattgaaggaaaaatatcggtttcgtattttactggatgagagcaactcatttggcg |
21423428 |
T |
|
| Q |
1327 |
tgcttggaagttctggaagagatctcactgaacactatggagttccagtatgtac |
1381 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
21423427 |
tgcttggaagttctggaagaggtctcactgaacactatggagttccagtatgtac |
21423373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 119; E-Value: 6e-60
Query Start/End: Original strand, 555 - 765
Target Start/End: Complemental strand, 21424229 - 21424019
Alignment:
| Q |
555 |
tttcatacataaatttatatcttttaacagggatgagggagtccgctggggaatacagaatggcctttatctttctagaagcacagtggtatattttaag |
654 |
Q |
| |
|
||||||| |||| ||| ||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| || || ||||||||| |
|
|
| T |
21424229 |
tttcatatataattttgtattttttaacagggatgaaggagtccactggggaatacagaatggcctttatctttctagaagcactgtcgtgtattttaag |
21424130 |
T |
|
| Q |
655 |
cacaataacatggattctttaagagaaactttagagaacattacttccaaatataagaggaccaagaatttgaggcgttatattgtcattgaagctctct |
754 |
Q |
| |
|
|||||| |||||||||||||| |||||| |||||||| ||| ||| ||||||||| |||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
21424129 |
cacaatgacatggattctttagaagaaacattagagaagcttagttctaaatataagcacaccaagaatttgaggcgttatattgttgtcgaagctctct |
21424030 |
T |
|
| Q |
755 |
accaggtagat |
765 |
Q |
| |
|
||||||||||| |
|
|
| T |
21424029 |
accaggtagat |
21424019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 106; E-Value: 3e-52
Query Start/End: Original strand, 1475 - 1596
Target Start/End: Complemental strand, 21423281 - 21423160
Alignment:
| Q |
1475 |
gtgtgctgcaggttgataagttagatcttataactgctgctatgggacatgcactggccacagaaggaggattctgcacgggaagtgcaagagttataga |
1574 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
21423281 |
gtgtgctgcaggttgagaagttagatcttataactgctgctatgggacatgcattggccacagaaggaggattctgcaccggaagtgcaagagttataga |
21423182 |
T |
|
| Q |
1575 |
tcaccaagtatggtagtgtcat |
1596 |
Q |
| |
|
|||||| ||||||||||||||| |
|
|
| T |
21423181 |
tcaccaggtatggtagtgtcat |
21423160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 53; Significance: 1e-20; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 2017 - 2081
Target Start/End: Complemental strand, 38954654 - 38954590
Alignment:
| Q |
2017 |
ttcattaatacctgaatttgcaggtctgaactataaaatttgcatgataaagcgatgtgcataac |
2081 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
38954654 |
ttcattaatacctgaatttgcaggtccaaactataaaatttgcatgattaagcgatgtgcataac |
38954590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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