View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21074_low_16 (Length: 383)
Name: NF21074_low_16
Description: NF21074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21074_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 10 - 367
Target Start/End: Original strand, 25953922 - 25954282
Alignment:
| Q |
10 |
attattctactgaaaaaatcattgttataccaaaatgatattttaaggattttgacgatat--gtgtaatgaatgggacatatgaaaaggaatatttttt |
107 |
Q |
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| T |
25953922 |
attattctattgaaaaaatcattgttataccaaaatgatattttaaggatttt-acgatatatgtgtaatgaatgggacaaatgaaaaggaatatttttt |
25954020 |
T |
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| Q |
108 |
g--gttgtaaattgagtatcatccgcacgcgtaattgtagagactaatttctcgagttttttgtgatccaattgggcagcaaactctccctaaattaaaa |
205 |
Q |
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| T |
25954021 |
tttgttgtaaattgagtatcatctgcacgcacaattgtagagactaatctttcgagttttttgtgatccaattcggcggcaaactctccctaaattagaa |
25954120 |
T |
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| Q |
206 |
gagacacatgttatctaatctaaacattgttaaatagatgaagaaaaagattaaacaaaattcgttaattaaagaaaccacatcaaatctgtgagcacaa |
305 |
Q |
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|||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
25954121 |
gagatacatgttatctgatctaaacattgttgaatagatgaagaaaaagattaaacaaaattcgttaattaaaaaaaccacatcaaatctgtgagcacaa |
25954220 |
T |
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| Q |
306 |
tggagagcaaagataagcagggcacaaaccacgtatataaaatgagttaacattgaactctc |
367 |
Q |
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| T |
25954221 |
tggagagcaaagataagctgggcacaaaccacgtatataaaatgagttaacattaaactctc |
25954282 |
T |
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