View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21075_low_8 (Length: 249)

Name: NF21075_low_8
Description: NF21075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21075_low_8
NF21075_low_8
[»] chr3 (44 HSPs)
chr3 (7-240)||(9710888-9711121)
chr3 (9-160)||(46492346-46492497)
chr3 (9-160)||(51618074-51618222)
chr3 (9-127)||(35414812-35414930)
chr3 (9-160)||(2379075-2379223)
chr3 (9-160)||(2571293-2571443)
chr3 (9-132)||(33474476-33474599)
chr3 (6-138)||(23803046-23803178)
chr3 (9-147)||(10307804-10307941)
chr3 (33-160)||(8497447-8497577)
chr3 (9-160)||(12515477-12515627)
chr3 (9-160)||(50204427-50204578)
chr3 (17-160)||(54527717-54527860)
chr3 (10-160)||(11610939-11611088)
chr3 (9-160)||(13495318-13495469)
chr3 (9-165)||(31318658-31318816)
chr3 (9-160)||(42180076-42180227)
chr3 (9-160)||(51567823-51567972)
chr3 (16-147)||(23638059-23638190)
chr3 (9-160)||(38389471-38389622)
chr3 (9-147)||(16875028-16875165)
chr3 (9-134)||(2566536-2566657)
chr3 (9-160)||(8165670-8165821)
chr3 (9-160)||(20938081-20938232)
chr3 (9-59)||(3863454-3863504)
chr3 (9-159)||(40497073-40497222)
chr3 (98-160)||(46845532-46845594)
chr3 (93-154)||(47386952-47387014)
chr3 (98-159)||(24569329-24569390)
chr3 (9-74)||(46845146-46845211)
chr3 (17-138)||(51401486-51401607)
chr3 (33-141)||(1569217-1569325)
chr3 (9-53)||(40930182-40930226)
chr3 (197-240)||(3785858-3785901)
chr3 (9-56)||(25633126-25633173)
chr3 (25-152)||(38786343-38786468)
chr3 (9-59)||(11611101-11611151)
chr3 (98-160)||(24087008-24087070)
chr3 (9-59)||(29686445-29686495)
chr3 (119-160)||(35415134-35415175)
chr3 (9-138)||(38785926-38786055)
chr3 (99-160)||(51339276-51339337)
chr3 (9-45)||(23523085-23523121)
chr3 (16-80)||(45983610-45983674)
[»] chr1 (45 HSPs)
chr1 (9-160)||(36490803-36490954)
chr1 (9-160)||(23591722-23591873)
chr1 (9-160)||(7519999-7520151)
chr1 (9-160)||(23576417-23576567)
chr1 (9-159)||(13321901-13322051)
chr1 (9-159)||(38812765-38812915)
chr1 (16-160)||(22167359-22167503)
chr1 (9-160)||(1502723-1502873)
chr1 (17-157)||(19277815-19277948)
chr1 (9-160)||(41624854-41625004)
chr1 (9-160)||(30171903-30172054)
chr1 (9-160)||(30187444-30187595)
chr1 (9-159)||(51920434-51920584)
chr1 (16-129)||(6307558-6307670)
chr1 (9-74)||(25465268-25465333)
chr1 (9-160)||(6180210-6180361)
chr1 (9-160)||(6754496-6754646)
chr1 (9-160)||(30362998-30363149)
chr1 (9-160)||(39150330-39150480)
chr1 (9-157)||(35512752-35512900)
chr1 (9-160)||(313774-313924)
chr1 (9-159)||(17919479-17919628)
chr1 (23-113)||(29635765-29635855)
chr1 (63-160)||(34050340-34050437)
chr1 (9-137)||(9516628-9516756)
chr1 (16-163)||(23378512-23378661)
chr1 (9-160)||(34801992-34802142)
chr1 (33-116)||(52337834-52337917)
chr1 (9-59)||(6569988-6570038)
chr1 (22-160)||(7824874-7825012)
chr1 (18-147)||(8062242-8062370)
chr1 (38-163)||(39627603-39627728)
chr1 (9-74)||(41676563-41676628)
chr1 (99-160)||(44918049-44918110)
chr1 (9-53)||(5875218-5875262)
chr1 (107-159)||(28016101-28016153)
chr1 (98-152)||(2222327-2222380)
chr1 (98-160)||(11744920-11744982)
chr1 (98-160)||(25956673-25956735)
chr1 (17-147)||(39930812-39930941)
chr1 (107-160)||(22331647-22331700)
chr1 (63-159)||(26978072-26978169)
chr1 (71-131)||(33048177-33048237)
chr1 (9-53)||(39310789-39310833)
chr1 (96-160)||(40799348-40799412)
[»] scaffold0036 (1 HSPs)
scaffold0036 (9-160)||(94021-94172)
[»] chr2 (52 HSPs)
chr2 (9-160)||(15411625-15411776)
chr2 (9-147)||(24729580-24729718)
chr2 (23-137)||(40562094-40562208)
chr2 (47-157)||(2051641-2051751)
chr2 (9-160)||(5853466-5853619)
chr2 (9-160)||(16493535-16493688)
chr2 (9-160)||(22704559-22704712)
chr2 (9-160)||(5583561-5583711)
chr2 (17-160)||(25948061-25948206)
chr2 (9-160)||(34213952-34214105)
chr2 (33-153)||(11660946-11661065)
chr2 (9-157)||(45062225-45062373)
chr2 (9-160)||(19228450-19228600)
chr2 (9-160)||(20566020-20566171)
chr2 (9-147)||(7757789-7757926)
chr2 (9-160)||(14377449-14377599)
chr2 (9-160)||(23932589-23932740)
chr2 (9-160)||(27665047-27665197)
chr2 (9-84)||(29157832-29157907)
chr2 (9-160)||(38248423-38248572)
chr2 (9-160)||(43806384-43806535)
chr2 (9-162)||(9747339-9747492)
chr2 (9-129)||(9450312-9450432)
chr2 (9-160)||(7720139-7720290)
chr2 (9-160)||(16126562-16126712)
chr2 (11-160)||(16919159-16919307)
chr2 (23-131)||(37471757-37471865)
chr2 (21-131)||(13351226-13351335)
chr2 (17-141)||(4821320-4821443)
chr2 (9-113)||(35729188-35729292)
chr2 (9-80)||(4576329-4576400)
chr2 (9-160)||(12016691-12016841)
chr2 (17-160)||(22705479-22705621)
chr2 (9-160)||(25998005-25998156)
chr2 (9-80)||(26003349-26003420)
chr2 (17-131)||(15231884-15231998)
chr2 (98-160)||(43388858-43388920)
chr2 (23-96)||(17234955-17235028)
chr2 (9-50)||(43388484-43388525)
chr2 (9-53)||(8065254-8065298)
chr2 (64-168)||(27865873-27865976)
chr2 (41-116)||(2544245-2544320)
chr2 (9-156)||(29142102-29142249)
chr2 (107-161)||(40503082-40503136)
chr2 (111-160)||(3504494-3504543)
chr2 (33-158)||(36612758-36612883)
chr2 (33-158)||(36620609-36620734)
chr2 (99-160)||(39904140-39904201)
chr2 (9-45)||(6109528-6109564)
chr2 (16-56)||(8770896-8770936)
chr2 (9-45)||(11660897-11660933)
chr2 (89-157)||(39367086-39367154)
[»] chr7 (45 HSPs)
chr7 (9-160)||(8091315-8091466)
chr7 (9-160)||(25709402-25709553)
chr7 (23-164)||(47707901-47708045)
chr7 (9-160)||(46290035-46290185)
chr7 (9-160)||(33343013-33343163)
chr7 (9-134)||(34270312-34270436)
chr7 (16-157)||(26300600-26300739)
chr7 (16-160)||(36548470-36548613)
chr7 (9-160)||(4969797-4969948)
chr7 (9-160)||(9331986-9332136)
chr7 (9-160)||(19889365-19889515)
chr7 (9-160)||(45501483-45501634)
chr7 (9-159)||(23982758-23982908)
chr7 (16-129)||(7040262-7040374)
chr7 (64-160)||(19868138-19868234)
chr7 (9-160)||(7170027-7170177)
chr7 (9-160)||(24462958-24463108)
chr7 (9-160)||(39757113-39757263)
chr7 (9-160)||(5909285-5909435)
chr7 (88-159)||(38554263-38554334)
chr7 (9-102)||(33072063-33072156)
chr7 (9-137)||(7899489-7899617)
chr7 (9-160)||(12085934-12086084)
chr7 (9-80)||(26037197-26037268)
chr7 (98-157)||(38759975-38760034)
chr7 (9-59)||(3561881-3561931)
chr7 (94-160)||(39869147-39869213)
chr7 (9-74)||(18102233-18102298)
chr7 (16-160)||(3530124-3530267)
chr7 (20-147)||(384444-384570)
chr7 (9-52)||(820544-820587)
chr7 (9-52)||(22041729-22041772)
chr7 (9-148)||(28323172-28323310)
chr7 (9-80)||(29398137-29398208)
chr7 (9-160)||(29692543-29692694)
chr7 (64-126)||(2276733-2276795)
chr7 (102-160)||(24699160-24699217)
chr7 (198-240)||(28805193-28805235)
chr7 (98-160)||(31066828-31066890)
chr7 (107-160)||(39475872-39475926)
chr7 (27-118)||(41572285-41572372)
chr7 (9-55)||(42750412-42750458)
chr7 (22-131)||(12624690-12624798)
chr7 (9-61)||(5833478-5833530)
chr7 (63-131)||(11680075-11680143)
[»] chr4 (52 HSPs)
chr4 (9-131)||(34941331-34941453)
chr4 (2-168)||(24684852-24685019)
chr4 (9-160)||(27019284-27019435)
chr4 (9-160)||(51691366-51691516)
chr4 (9-132)||(4779439-4779562)
chr4 (34-173)||(13009783-13009922)
chr4 (9-160)||(17409848-17409999)
chr4 (17-160)||(19468218-19468361)
chr4 (17-160)||(19450911-19451054)
chr4 (9-160)||(39876855-39877005)
chr4 (9-160)||(52391322-52391473)
chr4 (18-160)||(2096895-2097037)
chr4 (9-160)||(9759145-9759295)
chr4 (9-160)||(16667387-16667538)
chr4 (9-160)||(23545500-23545651)
chr4 (9-160)||(50352327-50352477)
chr4 (9-168)||(33632206-33632364)
chr4 (17-160)||(40049583-40049725)
chr4 (9-160)||(49181096-49181247)
chr4 (20-128)||(55813920-55814028)
chr4 (17-157)||(24297399-24297539)
chr4 (9-160)||(47326895-47327046)
chr4 (9-160)||(47341691-47341842)
chr4 (16-122)||(10658427-10658533)
chr4 (16-122)||(10872572-10872678)
chr4 (20-138)||(16069221-16069339)
chr4 (19-148)||(37432879-37433008)
chr4 (9-160)||(23553594-23553745)
chr4 (9-81)||(49250338-49250410)
chr4 (9-144)||(4329635-4329769)
chr4 (9-80)||(18882270-18882341)
chr4 (17-148)||(23438192-23438322)
chr4 (112-159)||(25843316-25843363)
chr4 (9-160)||(54495640-54495791)
chr4 (98-160)||(8736902-8736964)
chr4 (9-59)||(29190819-29190869)
chr4 (9-59)||(35999950-36000000)
chr4 (9-59)||(48910805-48910855)
chr4 (67-160)||(6875525-6875618)
chr4 (40-125)||(33288267-33288352)
chr4 (51-144)||(54506463-54506556)
chr4 (99-147)||(36000032-36000080)
chr4 (16-148)||(41415567-41415698)
chr4 (9-59)||(49228779-49228829)
chr4 (17-50)||(13214427-13214460)
chr4 (9-74)||(23051385-23051450)
chr4 (108-160)||(3085376-3085428)
chr4 (9-53)||(3085801-3085845)
chr4 (99-163)||(10389360-10389424)
chr4 (9-45)||(27362530-27362566)
chr4 (88-160)||(42480004-42480076)
chr4 (99-147)||(48910894-48910942)
[»] chr8 (51 HSPs)
chr8 (9-160)||(3306058-3306208)
chr8 (9-160)||(40225990-40226143)
chr8 (9-164)||(5573308-5573461)
chr8 (9-157)||(22838252-22838400)
chr8 (9-160)||(2161412-2161562)
chr8 (16-160)||(35678285-35678428)
chr8 (9-160)||(12189591-12189742)
chr8 (9-160)||(12434019-12434170)
chr8 (9-160)||(14816129-14816279)
chr8 (9-160)||(14829461-14829611)
chr8 (16-159)||(36967080-36967223)
chr8 (9-160)||(8284571-8284723)
chr8 (16-160)||(9580119-9580263)
chr8 (9-160)||(26682092-26682243)
chr8 (9-160)||(12132007-12132158)
chr8 (9-147)||(13327944-13328081)
chr8 (21-101)||(297178-297258)
chr8 (88-160)||(37264525-37264597)
chr8 (9-160)||(38212947-38213099)
chr8 (9-160)||(20514657-20514808)
chr8 (9-160)||(26363993-26364143)
chr8 (9-160)||(38843728-38843879)
chr8 (17-163)||(16445747-16445892)
chr8 (9-82)||(15198903-15198976)
chr8 (9-157)||(6818044-6818192)
chr8 (16-144)||(9801709-9801836)
chr8 (9-121)||(28014861-28014973)
chr8 (9-157)||(44091346-44091493)
chr8 (9-160)||(7140462-7140612)
chr8 (99-158)||(9743888-9743947)
chr8 (93-168)||(12346022-12346097)
chr8 (9-160)||(39701806-39701956)
chr8 (21-160)||(45005994-45006132)
chr8 (9-121)||(27874684-27874796)
chr8 (9-160)||(10129128-10129278)
chr8 (98-152)||(6850669-6850723)
chr8 (9-59)||(18567419-18567469)
chr8 (9-54)||(13496712-13496757)
chr8 (9-74)||(14961666-14961731)
chr8 (33-121)||(35583430-35583517)
chr8 (88-160)||(44222516-44222587)
chr8 (9-144)||(4080397-4080531)
chr8 (98-157)||(10974646-10974705)
chr8 (9-148)||(39024860-39024998)
chr8 (98-160)||(33430205-33430267)
chr8 (98-156)||(34869614-34869672)
chr8 (25-152)||(39430517-39430645)
chr8 (119-160)||(7750692-7750733)
chr8 (100-160)||(40568337-40568398)
chr8 (99-159)||(8140593-8140653)
chr8 (9-53)||(32186317-32186361)
[»] chr6 (31 HSPs)
chr6 (9-160)||(30591166-30591317)
chr6 (30-168)||(30623342-30623480)
chr6 (9-144)||(14228129-14228263)
chr6 (9-144)||(28943772-28943906)
chr6 (9-160)||(34692378-34692529)
chr6 (13-160)||(1017785-1017932)
chr6 (9-160)||(10887053-10887204)
chr6 (9-160)||(17552590-17552740)
chr6 (9-160)||(31069585-31069735)
chr6 (17-160)||(33017749-33017891)
chr6 (9-160)||(6016880-6017031)
chr6 (9-160)||(8977469-8977620)
chr6 (9-131)||(31568163-31568284)
chr6 (16-113)||(23936386-23936483)
chr6 (20-135)||(28759028-28759142)
chr6 (9-56)||(29863305-29863352)
chr6 (9-78)||(3261184-3261253)
chr6 (16-153)||(17141306-17141443)
chr6 (88-157)||(29730305-29730374)
chr6 (9-160)||(18332691-18332842)
chr6 (9-59)||(2830684-2830734)
chr6 (9-59)||(3853068-3853118)
chr6 (98-160)||(24979241-24979303)
chr6 (99-160)||(2830773-2830834)
chr6 (9-138)||(17596388-17596516)
chr6 (99-160)||(22974665-22974726)
chr6 (99-160)||(23813675-23813736)
chr6 (17-130)||(30708045-30708158)
chr6 (9-53)||(13391806-13391850)
chr6 (10-50)||(20979106-20979146)
chr6 (9-81)||(31503845-31503917)
[»] chr5 (31 HSPs)
chr5 (9-160)||(30839806-30839956)
chr5 (9-160)||(36597604-36597754)
chr5 (18-160)||(18841717-18841859)
chr5 (16-160)||(24014698-24014841)
chr5 (9-160)||(2795548-2795698)
chr5 (9-160)||(3398244-3398395)
chr5 (9-160)||(11636756-11636906)
chr5 (9-147)||(6863594-6863731)
chr5 (9-152)||(15240953-15241096)
chr5 (9-160)||(40512976-40513126)
chr5 (33-134)||(18150464-18150565)
chr5 (17-134)||(40166332-40166448)
chr5 (9-160)||(8103583-8103733)
chr5 (9-160)||(11249961-11250110)
chr5 (9-59)||(30893754-30893804)
chr5 (9-147)||(32019987-32020125)
chr5 (94-163)||(5958211-5958280)
chr5 (17-111)||(23995427-23995523)
chr5 (33-157)||(26265071-26265197)
chr5 (9-59)||(4047537-4047587)
chr5 (9-131)||(31365953-31366074)
chr5 (9-147)||(31567494-31567632)
chr5 (16-74)||(35151329-35151387)
chr5 (107-163)||(11360207-11360264)
chr5 (99-160)||(11375984-11376045)
chr5 (99-160)||(28629903-28629964)
chr5 (16-160)||(34578036-34578179)
chr5 (9-136)||(15820274-15820401)
chr5 (98-159)||(26376661-26376722)
chr5 (16-80)||(36474639-36474703)
chr5 (16-56)||(41350330-41350370)
[»] scaffold0305 (2 HSPs)
scaffold0305 (20-160)||(17802-17943)
scaffold0305 (9-144)||(17999-18134)
[»] scaffold0061 (1 HSPs)
scaffold0061 (9-160)||(52782-52932)
[»] scaffold0017 (1 HSPs)
scaffold0017 (9-160)||(145702-145852)
[»] scaffold0073 (1 HSPs)
scaffold0073 (16-129)||(16545-16657)
[»] scaffold0128 (2 HSPs)
scaffold0128 (9-96)||(44297-44384)
scaffold0128 (118-160)||(44389-44431)
[»] scaffold0192 (1 HSPs)
scaffold0192 (9-79)||(13566-13636)
[»] scaffold0618 (1 HSPs)
scaffold0618 (9-157)||(8417-8564)
[»] scaffold0111 (2 HSPs)
scaffold0111 (9-160)||(37117-37268)
scaffold0111 (9-72)||(41094-41157)
[»] scaffold0011 (1 HSPs)
scaffold0011 (9-59)||(13210-13260)
[»] scaffold0006 (2 HSPs)
scaffold0006 (98-159)||(98874-98935)
scaffold0006 (98-159)||(108152-108213)
[»] scaffold0727 (1 HSPs)
scaffold0727 (9-160)||(5715-5866)
[»] scaffold0074 (1 HSPs)
scaffold0074 (9-56)||(45500-45547)
[»] scaffold0009 (1 HSPs)
scaffold0009 (99-144)||(43503-43548)
[»] scaffold0136 (1 HSPs)
scaffold0136 (16-56)||(1453-1493)


Alignment Details
Target: chr3 (Bit Score: 206; Significance: 1e-113; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 7 - 240
Target Start/End: Complemental strand, 9711121 - 9710888
Alignment:
Q  7 tctttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaatt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9711121 tctttctaacatgtgcaaatttgcatatgttaagaagttcaaaataatacattcgcattggaacttgtatattttgtaattaatacataaatttttaatt 9711022  T
Q  107 aataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtgtaacgttgttgtatactaatagcattgcccaaaaataagaataaag 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  9711021 aataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtgcaatgttgttgtatactaatagcattgcccaaaaataagaataaag 9710922  T
Q  207 attggtagaaacccttaatatgtaaacccctttg 240  Q
    |||||||||||||||||||||||| |||||||||    
T  9710921 attggtagaaacccttaatatgtacacccctttg 9710888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 46492346 - 46492497
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||||||||||||| || | |||||||| || ||| ||||||||| ||||||||||||||| |||||||| | |||| |||| |  ||||| ||    
T  46492346 tttctatcatgtgcaaattttcacacgttaagaaatttaaagtagtaactttgcattgaaacttgtacattttgtattaaatatataactcgttaataaa 46492445  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||||||||||||||||||||| | ||||||||| |||||||||||    
T  46492446 taattgttgtttttcaataaaaacttaccacttttagttgctttaacatgtg 46492497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 51618222 - 51618074
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| |||||||||||||  |||| ||||||| |||||| |||||||| |||||||| | |||| |||   ||||||| ||    
T  51618222 tttctatcatgtgcaaatttgcacatgttaagaagtttcaaattgtaactttgcattggaacttgtacattttgtattaaatatata---ttttaataaa 51618126  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||||||||| ||||||||| ||  |||||||||||||||||||||    
T  51618125 taattgttgtttttcagtaaaaacttgctgcttttagttgttttaacatgtg 51618074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 35414812 - 35414930
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||||||||||||| || |||||||||||||||||||||||||||   |||| || |||||||||||||| |||||| |||| |||| ||  ||    
T  35414812 tttctatcatgtgcaaatttacacatgttaagaagttcaaaatagtaactttatattggaagttgtatattttgtatttaatatataacttttgaacaaa 35414911  T
Q  109 taattgttgtttttcaata 127  Q
    |||||||||||||||||||    
T  35414912 taattgttgtttttcaata 35414930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 2379075 - 2379223
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||| | ||||||| || |||||| ||| || ||| || |||||| ||||| |||||||||||||||||| |||||| || | |||||||| ||    
T  2379075 tttctagcatctacaaatttacacatgttaggaaatttaaactaataactttgcattaaaacttgtatattttgtatttaatatatgactttttaataaa 2379174  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||   ||||| |||||||||||||||||| |||||||||||||||||||||    
T  2379175 taa---ttgttattcaataaaaacttactacttttagttgttttaacatgtg 2379223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 2571443 - 2571293
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||||||| |||||| |||||| | |||||||| | |||| |||| |||||  | ||    
T  2571443 tttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaa 2571344  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||  ||||||||||||||| ||| ||||||||   ||||||||||    
T  2571343 taattgttg-gtttcaataaaaacttgctacttttagttaccttaacatgtg 2571293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 33474476 - 33474599
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| | ||| | || || ||||||||| || || |||||||||| |||| |||| |||| ||| ||    
T  33474476 tttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaataaa 33474575  T
Q  109 taattgttgtttttcaataaaaac 132  Q
    ||||||||||||||||||||||||    
T  33474576 taattgttgtttttcaataaaaac 33474599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 23803046 - 23803178
Alignment:
Q  6 ctctttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaat 105  Q
    ||||||||| ||| |||||||||||| ||||||||||||| ||||||| || || |||||| |||||||||||||  || | |||| | || |||| |||    
T  23803046 ctctttctatcatatgcaaatttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgtatatttcatattaaatataaaacttttgaat 23803145  T
Q  106 taataattgttgtttttcaataaaaacttacta 138  Q
     ||||||||||||||||||| ||||| ||||||    
T  23803146 aaataattgttgtttttcaagaaaaagttacta 23803178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 10307941 - 10307804
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| |||||||||| || |||||||||| || |||||| |||||| | |||||||| | |||| |||| |||||  | ||    
T  10307941 tttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaaatttgcattggaacttgaacattttgtattaaatatataactttttgttaaa 10307842  T
Q  109 taattgttgtttttcaataaaaacttactagttttagtt 147  Q
    |||||||||  |||||||||||| || ||| ||||||||    
T  10307841 taattgttg-gtttcaataaaaatttgctacttttagtt 10307804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 160
Target Start/End: Original strand, 8497447 - 8497577
Alignment:
Q  33 atgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttttcaataaaaa- 131  Q
    ||||||| || || ||||| |||| || |||||||||||||||| |||| || |||||| |||| |||||||| | |||||||  ||||||||||||||     
T  8497447 atgttaaaaactttaaaattgtaattttgcattgaaacttgtatgttttatatttaataaataagtttttaataattaattgtaatttttcaataaaaaa 8497546  T
Q  132 --cttactagttttagttgttttaacatgtg 160  Q
      |||| || |||||||||||||||||||||    
T  8497547 gccttattacttttagttgttttaacatgtg 8497577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 12515477 - 12515627
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||| ||||||||| ||||||| || || ||||||||||||| |||| | |||||| | |||||||| | |||| |||| |||||  | ||    
T  12515477 tttctatcatgtgtaaatttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaatatataactttttgttaaa 12515576  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||| ||||||||||| ||| ||||||||   ||||||||||    
T  12515577 taattgttggtttt-aataaaaacttgctacttttagttaccttaacatgtg 12515627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 50204578 - 50204427
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||| || || | |||| ||| |||| ||||  || | |||| | || |||| |||  |    
T  50204578 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacctgtacatttaatattaaatataaaacttttgaatata 50204479  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||| |||| ||| ||||| |||||| | |||||||||||||||||||    
T  50204478 taattgttattttccaagaaaaaattactactattagttgttttaacatgtg 50204427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 160
Target Start/End: Original strand, 54527717 - 54527860
Alignment:
Q  17 atgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgtt 116  Q
    ||||||||||||||| |||||||||| || ||||||  || || | |||| |||||||| ||||  || | |||| | || |||| ||| ||||||||||    
T  54527717 atgtgcaaatttgcacatgttaagaaatttaaaatataaattttgtattggaacttgtacatttaatattaaatataaaacttttgaataaataattgtt 54527816  T
Q  117 gtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||| ||| ||||| |||||| | |||||||||||||||||||    
T  54527817 gttttccaagaaaaagttactactattagttgttttaacatgtg 54527860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 160
Target Start/End: Complemental strand, 11611088 - 11610939
Alignment:
Q  10 ttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaat 109  Q
    ||||| |||||||||||||||| ||| ||||||||| ||| ||||||||| |  ||| ||||||| | |||| || | ||||  | || ||||||| |||    
T  11611088 ttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgt-aacttttaataaat 11610990  T
Q  110 aattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||| |||||||| |||| |||||| |||||||||  ||||||||||    
T  11610989 aattgttggttttcaatgaaaagttactacttttagttgccttaacatgtg 11610939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 13495469 - 13495318
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||| ||||||||| ||| ||||||||| ||| |||||| || |  ||| |||||||  ||||| || | ||||  ||  |||||||| ||    
T  13495469 tttctatcatgtgaaaatttgcacatgataagaagtttaaagtagtaattttgacttggaacttgtgcattttatattaaatatgtaggtttttaataaa 13495370  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| ||||||||||||| |||||| ||||||||   ||||||||||    
T  13495369 taattgttgattttcaataaaaaattactacttttagttaccttaacatgtg 13495318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 165
Target Start/End: Complemental strand, 31318816 - 31318658
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||| ||||||||| ||||||||||||| || |||| || || |||||| |||||||| ||||  || | |||| | ||  ||| ||| ||    
T  31318816 tttctatcatgtgaaaatttgcacatgttaagaagtttaagatagaaattttgcattggaacttgtacatttaatattaaatataaaatctttgaataaa 31318717  T
Q  109 ta--attgttgtttttcaataaaaacttactagttttagttgttttaacatgtgtaacg 165  Q
    ||  ||||||||||||||| ||||| |||| | | ||||||||||||||||||| ||||    
T  31318716 tataattgttgtttttcaagaaaaaattaccactattagttgttttaacatgtgcaacg 31318658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 42180227 - 42180076
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||| ||||||||| ||||||||||||| ||||||  || || | |||| |||||||| ||||  || | |||| | || |||| ||| ||    
T  42180227 tttctatcatgtgtaaatttgcacatgttaagaagtttaaaataaaaattttgtattggaacttgtacatttaatattaaatataaaacttttaaataaa 42180128  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||| | ||||| ||| ||||| |||||| | |||||||||||||||||||    
T  42180127 taattatagttttccaagaaaaagttactactattagttgttttaacatgtg 42180076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 51567823 - 51567972
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| |||||   ||||| ||||||| || || | ||||||||||||| ||||  || | |||| | || |||| ||| ||    
T  51567823 tttctatcatgtgcaaatttgcacatgtt---aagtttaaaatagaaattttgtattgaaacttgtacatttactattaaatataaaacttttgaataaa 51567919  T
Q  109 taattgttgtttttcaa-taaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||||||| |||  ||||| |||||| | |||||||||||||||||||    
T  51567920 taattgttgttttccaagaaaaaagttactactattagttgttttaacatgtg 51567972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 23638059 - 23638190
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgt 115  Q
    |||| ||||||||||| |||||||||| || ||||| |||| || |  ||||||||||| |||||| || | |||| | || |||||| | ||||||||     
T  23638059 catgagcaaatttgcacatgttaagaaatttaaaatggtaagttagtcttgaaacttgtgtattttatattaaatatacaactttttattaaataattga 23638158  T
Q  116 tgtttttcaataaaaacttactagttttagtt 147  Q
    |||||||||||| ||| |||||| ||| ||||    
T  23638159 tgtttttcaatagaaagttactactttaagtt 23638190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 38389622 - 38389471
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||| | |||| || |  ||| |||||||  ||||  || | ||||  ||  |||||||| ||    
T  38389622 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaa 38389523  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||| | ||||||||||||||||| |||||| |||||| | | ||||||||||    
T  38389522 taagttttgtttttcaataaaaaattactacttttagatatcttaacatgtg 38389471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 16875028 - 16875165
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| | |||||||||||||| ||||||||||||| ||| |||||||||    ||||||||||| | |||| || | ||||  | |  ||||||| ||    
T  16875028 tttctatcgtgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatatgt-agcttttaatcaa 16875126  T
Q  109 taattgttgtttttcaataaaaacttactagttttagtt 147  Q
     |||||||| ||||||||||||| |||||| ||||||||    
T  16875127 caattgttggttttcaataaaaaattactacttttagtt 16875165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 2566657 - 2566536
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||||||||||||| || ||||||  || || |||||||||| || | ||||||||||||| |||||||| | |    ||||  |||| || ||    
T  2566657 tttctatcatgtgcaaatttacacatgttagaaaatttaaaatagtaattttgtattgaaacttgtacattttgtattga----ataacattttgataaa 2566562  T
Q  109 taattgttgtttttcaataaaaactt 134  Q
    ||||| ||||||||||||||||||||    
T  2566561 taattcttgtttttcaataaaaactt 2566536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 8165821 - 8165670
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaa-tttttaatta 107  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||  || || | |||| |||||||| ||||  | |||||  | |||| ||||  || |    
T  8165821 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatataaattttgtattggaacttgtacatttaat-attaactcttaaacttttgtataa 8165723  T
Q  108 ataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||| |||||||| ||| ||||| |||||| | ||||||||||||| |||||    
T  8165722 ataatcgttgttttccaaaaaaaagttactattattagttgttttaaaatgtg 8165670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 20938232 - 20938081
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacat-aaatttttaatta 107  Q
    |||||| |||||||||||||||| ||| ||||||||| ||| ||||||||| |  ||| ||||||| | ||||   ||||| | ||  |||||||||| |    
T  20938232 tttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtttttttatattaa-atatgtaatttttaatca 20938134  T
Q  108 ataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||  ||||||||||||| ||| || ||||||||   ||||||||||    
T  20938133 ataattgttagttttcaataaaaagttattacttttagttaccttaacatgtg 20938081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 3863504 - 3863454
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaactt 59  Q
    |||||| |||||||||||||||| ||||||||||||| ||| |||||||||    
T  3863504 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactt 3863454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 40497222 - 40497073
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||| ||||||||| ||| |||||||||    ||  |||||||  ||||| || | | ||  || ||||||||| |     
T  40497222 tttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttagaacttgtgcattttatattaactatgtagatttttaataat 40497123  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgt 159  Q
    |||||||||  |||||||||||| |||||| |||||||||  |||||||||    
T  40497122 taattgttg-atttcaataaaaagttactacttttagttgccttaacatgt 40497073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 46845532 - 46845594
Alignment:
Q  98 tttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||| ||||||||||| ||||||||||||| || ||| ||||||||| ||||| |||||    
T  46845532 tttttaataaataattgttgattttcaataaaaaatttctacttttagttgctttaagatgtg 46845594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 154
Target Start/End: Complemental strand, 47387014 - 47386952
Alignment:
Q  93 ataaatttttaattaataattgttgttttt-caataaaaacttactagttttagttgttttaa 154  Q
    |||| |||||||| |||||||||| ||||| |||||||||||||||| ||||||||| |||||    
T  47387014 ataactttttaataaataattgtttttttttcaataaaaacttactacttttagttgctttaa 47386952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 24569329 - 24569390
Alignment:
Q  98 tttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgt 159  Q
    |||||||| |||||||| |||||||||||||||| ||| || || ||||||| |||||||||    
T  24569329 tttttaataaataattgatgtttttcaataaaaagttattatttgtagttgtcttaacatgt 24569390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 46845146 - 46845211
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgt 74  Q
    |||||| |||||||||||||| | ||||||||||||||||||  |||  || ||||||||||||||    
T  46845146 tttctatcatgtgcaaatttgtacatgttaagaagttcaaaagggtatgtttgcattgaaacttgt 46845211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 51401607 - 51401486
Alignment:
Q  17 atgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgtt 116  Q
    |||| |||||||||| ||||||||||||| ||||||| || || | |||| |||||||| ||||  || | |||| | ||| ||  ||| ||||||||||    
T  51401607 atgtacaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaaaattcaaataaataattgtt 51401508  T
Q  117 gtttttcaataaaaacttacta 138  Q
    ||||| ||| ||||| ||||||    
T  51401507 gttttccaaaaaaaagttacta 51401486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 141
Target Start/End: Original strand, 1569217 - 1569325
Alignment:
Q  33 atgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttttcaataaaaac 132  Q
    ||||||||||||| |||||| |||||| | |||| |||||||  ||||| || |  |||  ||| ||| |||| ||| |||||||||||| ||||||||     
T  1569217 atgttaagaagtttaaaataataactttgtattggaacttgttcattttatattagatatgtaactttctaataaattattgttgttttttaataaaaaa 1569316  T
Q  133 ttactagtt 141  Q
    |||||||||    
T  1569317 ttactagtt 1569325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 40930226 - 40930182
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatag 53  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||    
T  40930226 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatag 40930182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 3785858 - 3785901
Alignment:
Q  197 aagaataaagattggtagaaacccttaatatgtaaacccctttg 240  Q
    ||||||||||||||||||| ||||||||| |||| |||||||||    
T  3785858 aagaataaagattggtagacacccttaatgtgtacacccctttg 3785901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 25633173 - 25633126
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaa 56  Q
    |||||| |||||||||||||| |  |||||||||||||||||||||||    
T  25633173 tttctatcatgtgcaaatttgaacttgttaagaagttcaaaatagtaa 25633126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 152
Target Start/End: Original strand, 38786343 - 38786468
Alignment:
Q  25 atttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttttca 124  Q
    ||||||| ||||||||||||| |||||||||| || |  |||||| ||||  ||||| || | |||   ||  |||||||| |||||||||| |||| ||    
T  38786343 atttgcacatgttaagaagtttaaaatagtaattttgatttgaaatttgtggattttatactaaatgtgtat-tttttaataaataattgttatttt-ca 38786440  T
Q  125 ataaaaacttactagttttagttgtttt 152  Q
    ||||||| |||||| |||||||||||||    
T  38786441 ataaaaaattactatttttagttgtttt 38786468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 11611151 - 11611101
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaactt 59  Q
    |||||| |||||||||||||||| ||| ||||||||| ||| |||||||||    
T  11611151 tttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactt 11611101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 160
Target Start/End: Complemental strand, 24087070 - 24087008
Alignment:
Q  98 tttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||| ||| |||||||||||||||| || ||||| |||||| | ||||||||||||| |||||    
T  24087070 ttttgaataaataattgttgttttttaagaaaaatttactactgttagttgttttaagatgtg 24087008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 29686495 - 29686445
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaactt 59  Q
    |||||| |||||||||||||||| ||| ||||||||| ||| |||||||||    
T  29686495 tttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactt 29686445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 35415134 - 35415175
Alignment:
Q  119 ttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||| |||| |||||||||| |||||||||||||||||||||    
T  35415134 ttttgaatacaaacttactatttttagttgttttaacatgtg 35415175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 38786055 - 38785926
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||| | |||| ||||||  ||||||||||| ||||||| || || | |||| ||||||||  |||| || | |||| | || |||  ||| ||    
T  38786055 tttctatcatatccaaacttgcatgagttaagaagtttaaaatagaaattttgtattggaacttgtacgttttatattaaatataaaactttcaaataaa 38785956  T
Q  109 taattgttgtttttcaataaaaacttacta 138  Q
    ||||||||||||||||| ||||| ||||||    
T  38785955 taattgttgtttttcaaaaaaaaattacta 38785926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 51339276 - 51339337
Alignment:
Q  99 ttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||| ||||||||||| |||||||| |||| |||||| ||||||||   ||||||||||    
T  51339276 ttttaatcaataattgttggttttcaatgaaaaattactatttttagttaccttaacatgtg 51339337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 23523121 - 23523085
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagtt 45  Q
    |||||| |||||||||||||||| |||||||||||||    
T  23523121 tttctatcatgtgcaaatttgcacatgttaagaagtt 23523085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 45983674 - 45983610
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattt 80  Q
    |||||||||||||||| | ||||||||||| ||||||| || ||   ||||||||||||| ||||    
T  45983674 catgtgcaaatttgcacaggttaagaagtttaaaatagaaattttatattgaaacttgtacattt 45983610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 36490954 - 36490803
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||| ||||||||||| ||||||||||||| ||||||||||||| |||||| |||||||| |||||||| |||||| |||| |||||||| ||    
T  36490954 tttctatcatgagcaaatttgcacatgttaagaagtttaaaatagtaactttgcattggaacttgtacattttgtatttaatatataactttttaataaa 36490855  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||||||||||||||||||||||| ||||| ||| |||||||||||    
T  36490854 taattgttgtttttcaataaaaacttactacttttaattgctttaacatgtg 36490803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 23591873 - 23591722
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| |||||||||| ||  |||||  ||||| |||||| |||||||| |||||||| | |||| |||| |||||||| ||    
T  23591873 tttctatcatgtgcaaatttgcacatgttaagaaattttaaataacaactttgcattggaacttgtacattttgtattaaatatataactttttaataaa 23591774  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||| ||| |||||||||||||||||||| ||||||||| |||||||||||    
T  23591773 taattattgattttcaataaaaacttactaattttagttgctttaacatgtg 23591722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 7519999 - 7520151
Alignment:
Q  9 tttctaacatgtgcaaa-tttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaatta 107  Q
    |||||| |||||||||| ||| || ||||||||||||| ||||||  ||||| ||||||||| ||||| |||||||| |||||| ||||  ||||||| |    
T  7519999 tttctatcatgtgcaaaattttcacatgttaagaagtttaaaataacaactttgcattgaaatttgtacattttgtatttaatatataacattttaataa 7520098  T
Q  108 ataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||| | || ||||| |||||||| |||||| ||||||||| |||||||||||    
T  7520099 ataagtattattttttaataaaaatttactacttttagttgctttaacatgtg 7520151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 23576417 - 23576567
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||||||| ||||||||||||| | |||||||| | |||| |||| |||||  | ||    
T  23576417 tttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtattaaatatataactttttgttaaa 23576516  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||  |||||||||||||||  || ||||||||   ||||||||||    
T  23576517 taattgttg-gtttcaataaaaacttgttacttttagttaccttaacatgtg 23576567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 13322051 - 13321901
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||||||||||||||||| ||||||| || || | |||| || ||||| ||||  || | |||| | || |||| ||  ||    
T  13322051 tttctatcatgtgcaaatttgcatatgttaagaagtttaaaatagaaattttgtattggaatttgtacatttaatattaaatataaaacttttgaaaaaa 13321952  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgt 159  Q
    ||||||||||||||||| ||||| |||||| | ||||||||||||||||||    
T  13321951 taattgttgtttttcaagaaaaagttactactattagttgttttaacatgt 13321901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 38812915 - 38812765
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||||||||||| || ||   ||||||||||||| ||||  || | |||| | || |||| ||| ||    
T  38812915 tttctatcatgtgcaaatttgcacatgttaagaagttcaaaatagaaattttatattgaaacttgtacatttaatattaaatataaaacttttgaataaa 38812816  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgt 159  Q
    |||||||||||||  || ||||| |||||| | ||||||||||||||||||    
T  38812815 taattgttgttttctaagaaaaagttactactattagttgttttaacatgt 38812765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 22167503 - 22167359
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgt 115  Q
    |||||||||||||||| ||| ||||||||| ||||||| ||||| | |||| |||||||| ||||  || | |||| | |  |||| ||| |||||||||    
T  22167503 catgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatataaattttttgaataaataattgt 22167404  T
Q  116 tgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||| ||||| |||||| | |||||||||||||||||||    
T  22167403 tgtttttcaagaaaaagttactactattagttgttttaacatgtg 22167359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 1502723 - 1502873
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||||||| |||||| || ||| | |||||||| | |||| |||| |||||  | ||    
T  1502723 tttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgaacattttgtattaaatatataactttttgttaaa 1502822  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| ||||||||||||| || ||| ||||||||   ||||||||||    
T  1502823 taattgttg-ttttcaataaaaatttgctacttttagttaccttaacatgtg 1502873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 19277948 - 19277815
Alignment:
Q  17 atgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgtt 116  Q
    ||||||||||||  | ||||| ||||||| |||||||||| || |||||| ||| ||||||||||||| ||||        |||||||| ||||||||||    
T  19277948 atgtgcaaattttaacatgttcagaagtttaaaatagtaattttgcattggaacgtgtatattttgtatttaac-------tttttaataaataattgtt 19277856  T
Q  117 gtttttcaataaaaacttactagttttagttgttttaacat 157  Q
    |||||||||||||||||||||| | || |||||||||||||    
T  19277855 gtttttcaataaaaacttactactctttgttgttttaacat 19277815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 41625004 - 41624854
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||||||| ||||||||| ||| ||||||||| |  ||| |||||||  ||||| || | | ||  || ||||||||| |     
T  41625004 tttctatcatgtgcaaatttgcatatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaataat 41624905  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||  |||||||||||| |||||| ||||||||| |||||||||||    
T  41624904 taattgttg-gtttcaataaaaagttactatttttagttgctttaacatgtg 41624854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 30172054 - 30171903
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||| | ||||||| |  ||| |||||||  ||||  || | ||||  ||  |||||||| ||    
T  30172054 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaa 30171955  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||| | ||||||||||||||||| |||||| |||||| ||| ||||||||||    
T  30171954 taagttttgtttttcaataaaaaattactacttttagatgtcttaacatgtg 30171903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 30187595 - 30187444
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||| | ||||||| |  ||| |||||||  ||||  || | ||||  ||  |||||||| ||    
T  30187595 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaa 30187496  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||| | ||||||||||||||||| |||||| |||||| ||| ||||||||||    
T  30187495 taagttttgtttttcaataaaaaattactacttttagatgtcttaacatgtg 30187444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 159
Target Start/End: Original strand, 51920434 - 51920584
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||| || || ||||||| || ||   ||| ||| ||||||||||  || | |||| | || |||| ||| ||    
T  51920434 tttctatcatgtgcaaatttgcacatgttaataaatttaaaatagaaattttatattaaaatttgtatatttaatattaaatataaaacttttgaataaa 51920533  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgt 159  Q
    ||||||||||||||||| ||||| |||||| | ||| ||||||||||||||    
T  51920534 taattgttgtttttcaaaaaaaaattactactattaattgttttaacatgt 51920584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 6307670 - 6307558
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgt 115  Q
    |||||||||||||||| ||||||||||||| ||| || ||  || |  ||| ||||||| |||||| || |||||| ||||||||||||| |||||||||    
T  6307670 catgtgcaaatttgcacatgttaagaagtttaaagtaatatgtttgatttggaacttgtgtattttcta-ttaatatataaatttttaataaataattgt 6307572  T
Q  116 tgtttttcaataaa 129  Q
    |||||| |||||||    
T  6307571 tgttttccaataaa 6307558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 25465333 - 25465268
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgt 74  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||| || |||||| |||||||    
T  25465333 tttctatcatgtgcaaatttgcacatgttaagaagttcaaaatagtaaatttgcattggaacttgt 25465268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 6180361 - 6180210
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||| || ||   |||| |||||||| ||||  || | |||| | || |||| ||| ||    
T  6180361 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgtacatttaatattaaatataaaacttttaaataaa 6180262  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||| |  |||| ||| ||||| |||||| | |||||||||||||||||||    
T  6180261 taattataattttccaagaaaaagttactactattagttgttttaacatgtg 6180210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 6754646 - 6754496
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||| ||||||||| ||| ||||||||| |  ||| |||||||  ||||| || | | ||  || ||||||||| |     
T  6754646 tttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaataat 6754547  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||  |||||||||||| |||||| |||||||||  ||||||||||    
T  6754546 taattgttg-gtttcaataaaaagttactatttttagttgccttaacatgtg 6754496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 30362998 - 30363149
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||| ||| || || ||||||||||||| |  ||| |||||||  ||||| || | ||||  ||  |||||||| |     
T  30362998 tttctatcatgtgcaaatttgcacatgataacaaatttaaaatagtaactttgacttggaacttgtgcattttatattaaatatgtaggtttttaataat 30363097  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| ||||||||||||| |||||| ||||||| |  ||||||||||    
T  30363098 taattgttggttttcaataaaaagttactatttttagtagccttaacatgtg 30363149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 39150330 - 39150480
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||| ||||||||| ||| ||||||||| |  ||| || |||| | |||| || | ||||  ||| |||| ||| ||    
T  39150330 tttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatatgtaactttt-aataaa 39150428  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||||||| |||| |||||| |||||||||  ||||||||||    
T  39150429 taattgttggttttcaatgaaaagttactacttttagttgccttaacatgtg 39150480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 157
Target Start/End: Complemental strand, 35512900 - 35512752
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||| || ||   |||| |||||| | ||||  || | |||| | || |||| |||  |    
T  35512900 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgcacatttaatattaaatataaaacttttgaatata 35512801  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacat 157  Q
    ||| ||||||||| ||| ||||| |||||| | ||||||||||||||||    
T  35512800 taaatgttgttttccaagaaaaagttactactattagttgttttaacat 35512752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 313924 - 313774
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||| |||||||||    ||| ||||||| | |||| || | ||||  | |  ||||||| ||    
T  313924 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgt-agcttttaatcaa 313826  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||||||| |||| |||||| ||||||||   ||||||||||    
T  313825 taattgttggttttcaatcaaaaattactacttttagttaccttaacatgtg 313774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 17919628 - 17919479
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||  ||||||||| ||| ||||||||| |  ||| || |||| | |||| || | ||||  ||| |||| ||| ||    
T  17919628 tttctatcatgtgcaaatttgcacataataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatatgtaactttt-aataaa 17919530  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgt 159  Q
    ||||||||| |||||||| |||| |||||| |||||||||  |||||||||    
T  17919529 taattgttggttttcaatgaaaagttactacttttagttgccttaacatgt 17919479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 29635765 - 29635855
Alignment:
Q  23 aaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataatt 113  Q
    ||||||| | ||||||| || || |||||||||||||   |||||||||||||||||||||| |||| | |||| |||||||| |||||||    
T  29635765 aaatttgtacatgttaaaaaatttaaaatagtaactttatattgaaacttgtatattttgtatttaacatataactttttaataaataatt 29635855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 160
Target Start/End: Original strand, 34050340 - 34050437
Alignment:
Q  63 attgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||| || ||||| || |||||| |||| ||||| || |||||||||||||||||||||| || ||  || |||| |||| |||||||||||    
T  34050340 attgaaacttttacattttatatttaatatataattttttgataaataattgttgtttttcaataataatttgttacttttggttgctttaacatgtg 34050437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 9516756 - 9516628
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||| ||||||||| |||||||||| || ||||| |||| ||    ||  ||||||| |||||| || | |||| |||| |||||||| ||    
T  9516756 tttctatcatgtgtaaatttgcacatgttaagaaatttaaaatggtaagtttctcttataacttgtgtattttatattaaatatataactttttaataaa 9516657  T
Q  109 taattgttgtttttcaataaaaacttact 137  Q
    |||||| ||||||||||| |||| |||||    
T  9516656 taattggtgtttttcaatgaaaagttact 9516628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 23378512 - 23378661
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaataca---taaatttttaattaataat 112  Q
    ||||| |||||||| | |||||||||| ||||||||||||| || | ||||  | ||||| ||||| || | |||| |   ||| |||||||  ||||||    
T  23378512 catgtacaaatttgaacatgttaagaatttcaaaatagtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataat 23378611  T
Q  113 tgttgtttttcaataaaaacttactagttttagttgttttaacatgtgtaa 163  Q
    |||| |||| ||||||||| ||| || |||||||||||||||||| |||||    
T  23378612 tgttatttt-caataaaaagttattaattttagttgttttaacatatgtaa 23378661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 34802142 - 34801992
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||||| |||| || |   || |||||||  ||||  || | ||||  ||  |||||||| ||    
T  34802142 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatggtaattttg-tctggaacttgtgcatttcatattaaatatgtagttttttaataaa 34802044  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||| | ||||||||||||||||| |||||| |||||| | | ||||||||||    
T  34802043 taagttttgtttttcaataaaaaattactacttttagatatcttaacatgtg 34801992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 52337917 - 52337834
Alignment:
Q  33 atgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgtt 116  Q
    ||||||||||||| |||||||||| |  |||||| ||||| | |||||| || | |||| ||||||||||||| ||||||||||    
T  52337917 atgttaagaagtttaaaatagtaaatatgcattgcaacttatgtattttatattaaatatataaatttttaataaataattgtt 52337834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 6569988 - 6570038
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaactt 59  Q
    |||||| |||||||||||||||| ||||||||||||| ||| |||||||||    
T  6569988 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactt 6570038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 160
Target Start/End: Original strand, 7824874 - 7825012
Alignment:
Q  22 caaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttt 121  Q
    |||||||||| ||||||| ||||| ||||||  || || | | ||||| ||||| ||||  || | |||| | || |||| ||| ||||||||| |||||    
T  7824874 caaatttgcacatgttaaaaagtttaaaataaaaattttgtaatgaaatttgtacatttaatattaaatataaaacttttgaataaataattgtggtttt 7824973  T
Q  122 tcaataaaaacttactagttttagttgttttaacatgtg 160  Q
     ||| ||||| |||||| | |||||||||||||||||||    
T  7824974 ccaagaaaaagttactactattagttgttttaacatgtg 7825012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 8062370 - 8062242
Alignment:
Q  18 tgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttg 117  Q
    |||||||||||||| ||||||| ||||| ||| |||||||||    |||||| || | | |||| || | |||| |||  |||||||| |||||||||||    
T  8062370 tgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttaatttgaaatttatgttttttatattaaatatatag-tttttaatcaataattgttg 8062272  T
Q  118 tttttcaataaaaacttactagttttagtt 147  Q
     |||||||| |||| |||||| ||||||||    
T  8062271 attttcaatgaaaagttactacttttagtt 8062242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 163
Target Start/End: Original strand, 39627603 - 39627728
Alignment:
Q  38 aagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttttcaataaaaacttact 137  Q
    ||||||||||||||||||| || | |||| |||||||  ||||| || | ||||  ||| |||| ||| | | |||||||||||||||| |||| || ||    
T  39627603 aagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaacttttcaataagtgattgttgtttttcaattaaaagttgct 39627702  T
Q  138 agttttagttgttttaacatgtgtaa 163  Q
    | ||||||||   |||||||||||||    
T  39627703 atttttagtttccttaacatgtgtaa 39627728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 41676563 - 41676628
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgt 74  Q
    |||||| |||||||||||||||| |||||||||| ||||||||| ||| || | ||| ||||||||    
T  41676563 tttctatcatgtgcaaatttgcacatgttaagaaattcaaaataataattttgtattaaaacttgt 41676628  T

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Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 44918110 - 44918049
Alignment:
Q  99 ttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||| ||||||||||| ||||||||||||| |||||| ||||||||   ||||||||||    
T  44918110 ttttaatcaataattgttgattttcaataaaaatttactacttttagttaccttaacatgtg 44918049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 5875218 - 5875262
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatag 53  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||    
T  5875218 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatag 5875262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 28016153 - 28016101
Alignment:
Q  107 aataattgttgtttttcaataaaaacttactagttttagttgttttaacatgt 159  Q
    ||||||||||||||| ||| ||||| |||||| | ||||||||||||||||||    
T  28016153 aataattgttgttttccaagaaaaagttactactattagttgttttaacatgt 28016101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 2222327 - 2222380
Alignment:
Q  98 tttttaattaataattgttgtttttcaataaaaacttactagttttagttgtttt 152  Q
    |||||||| ||||||| |||||||||||| |||| |||||| |||||||||||||    
T  2222327 tttttaataaataattattgtttttcaat-aaaagttactacttttagttgtttt 2222380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 11744920 - 11744982
Alignment:
Q  98 tttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||| ||||||||||||||||||||||||| ||  || ||||| ||  |||||||||||    
T  11744920 tttttaataaataattgttgtttttcaataaaaagtttatacttttaatttctttaacatgtg 11744982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 160
Target Start/End: Complemental strand, 25956735 - 25956673
Alignment:
Q  98 tttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||| ||| ||||||||||||||||||| ||||| ||| || | ||||||||||||| |||||    
T  25956735 ttttaaataaataattgttgtttttcaagaaaaagttattattattagttgttttaatatgtg 25956673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 147
Target Start/End: Original strand, 39930812 - 39930941
Alignment:
Q  17 atgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgtt 116  Q
    ||||||||||||||| ||| ||||||||| ||| |||||||||    ||||||||||||| |||| || |  |||  | | |||||||| ||||||| ||    
T  39930812 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttgaaacttgtattttttatattatatatgt-agtttttaataaataattatt 39930910  T
Q  117 gtttttcaataaaaacttactagttttagtt 147  Q
      |||||||| |||| |||||| ||||||||    
T  39930911 tgttttcaatgaaaaattactacttttagtt 39930941  T

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Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 22331700 - 22331647
Alignment:
Q  107 aataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||||||||||||| ||||| |||||| | |||| | ||||||||||||    
T  22331700 aataattgttgtttttcaagaaaaagttactactattagatattttaacatgtg 22331647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 159
Target Start/End: Complemental strand, 26978169 - 26978072
Alignment:
Q  63 attgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgt-ttttcaataaaaacttactagttttagttgttttaacatgt 159  Q
    ||||||||||||||||||  || | |||| | || |||| ||| |||||||||||| |||| || ||||| || ||| | ||||||||||||||||||    
T  26978169 attgaaacttgtatatttaatattaaatataaaatttttgaataaataattgttgtttttttaagaaaaagttgctactattagttgttttaacatgt 26978072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 33048177 - 33048237
Alignment:
Q  71 ttgtatattttgtaattaatacataaatttttaattaataattgttgtttttcaataaaaa 131  Q
    ||||||||||| || | |||| |||| |||||||| |||||||||| ||||| ||||||||    
T  33048177 ttgtatattttatattaaatatataactttttaataaataattgttattttttaataaaaa 33048237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 39310789 - 39310833
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatag 53  Q
    |||||| |||||||||||||||| ||||||| ||||| |||||||    
T  39310789 tttctatcatgtgcaaatttgcacatgttaaaaagtttaaaatag 39310833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 40799348 - 40799412
Alignment:
Q  96 aatttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||| ||||||| || |||||||||||||| ||  || ||||||||| | |||||||||    
T  40799348 aatttttaataaataatttttatttttcaataaaaagttcatacttttagttgctctaacatgtg 40799412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 94021 - 94172
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||||||||||||||||||||||||||||||  ||||| ||||||  ||||| ||||| || |||||||| | |||| |||  |||||||| ||    
T  94021 tttctatcatgtgcaaatttgcatatgttaagaagttttaaatactaactttacattggaacttatacattttgtattaaatatatagttttttaataaa 94120  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||| ||  |||||||||||||||||||| ||||||||| |||||||||||    
T  94121 taattattagttttcaataaaaacttactacttttagttgatttaacatgtg 94172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 7e-33; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 15411625 - 15411776
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |  |||||||||||  ||||| || | ||||  ||  |||||||| ||    
T  15411625 tttctaacatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaatatgtagctttttaataaa 15411724  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    | ||||||||||||||||||||| |||||| ||||||||  |||||||||||    
T  15411725 ttattgttgtttttcaataaaaaattactacttttagttactttaacatgtg 15411776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 24729580 - 24729718
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||||||| |||||| || |||||||||||||| | | ||||||| |||||||| ||    
T  24729580 tttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgtatattttgtattaattacataactttttaataaa 24729679  T
Q  109 taattgttgtttttcaataaaaacttactagttttagtt 147  Q
    ||||| ||  ||||||||||||| |||||| ||||||||    
T  24729680 taattatttattttcaataaaaatttactatttttagtt 24729718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 40562094 - 40562208
Alignment:
Q  23 aaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgttttt 122  Q
    ||||||||| ||||||| ||||| |||||| |||||| |||||||||||| ||||||||||| |||||| |||| | |||||| ||||||||||| ||||    
T  40562094 aaatttgcacatgttaaaaagtttaaaatattaactttgcattgaaacttttatattttgtatttaatatataactctttaataaataattgttgatttt 40562193  T
Q  123 caataaaaacttact 137  Q
    |||||||||||||||    
T  40562194 caataaaaacttact 40562208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 157
Target Start/End: Complemental strand, 2051751 - 2051641
Alignment:
Q  47 aaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttttcaataaaaacttactagttttagt 146  Q
    ||||||||||||  ||||||| |||| |||||||| || | ||||  |||||||||||| |||||||||||||||||||||||||||| ||| |||||||    
T  2051751 aaaatagtaactatgcattgatacttatatattttatattaaatatttaaatttttaataaataattgttgtttttcaataaaaacttgctaattttagt 2051652  T
Q  147 tgttttaacat 157  Q
    |||||||||||    
T  2051651 tgttttaacat 2051641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 5853466 - 5853619
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| | ||| | || || ||||||||| || || |||||||||| |||| |||| |||| ||| ||    
T  5853466 tttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaataaa 5853565  T
Q  109 taattgttgtttttcaataaaa--acttactagttttagttgttttaacatgtg 160  Q
    ||||||||||||||||||||||  ||| |||| ||||| ||| |||||||||||    
T  5853566 taattgttgtttttcaataaaaacactaactacttttaattgctttaacatgtg 5853619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 16493535 - 16493688
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| | ||| | || || ||||||||| || || |||||||||| |||| |||| |||| ||| ||    
T  16493535 tttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaataaa 16493634  T
Q  109 taattgttgtttttcaataaaaac--ttactagttttagttgttttaacatgtg 160  Q
    ||||||||||||||||||||||||  | |||| ||||| ||| |||||||||||    
T  16493635 taattgttgtttttcaataaaaacattaactacttttaattgctttaacatgtg 16493688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 22704712 - 22704559
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| || |||||||||| | ||| | || || ||||||||| || || |||||||||| |||| |||| |||| ||| ||    
T  22704712 tttctatcatgtgcaaatttgcacatcttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaataaa 22704613  T
Q  109 taattgttgtttttcaataaaa--acttactagttttagttgttttaacatgtg 160  Q
    ||||||||||||||||||||||  ||| |||| ||||| ||| |||||||||||    
T  22704612 taattgttgtttttcaataaaaacactaactacttttaattgctttaacatgtg 22704559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 5583561 - 5583711
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||| ||||||||||| |||||||||| || ||||||||||||| |||||| |||||| | |||||||| | |||| |||| |||||  | ||    
T  5583561 tttctatcatgcgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaa 5583660  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||  ||||||||||||||| ||| ||||||||   ||||||||||    
T  5583661 taattgttg-gtttcaataaaaacttgctacttttagttaccttaacatgtg 5583711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 160
Target Start/End: Complemental strand, 25948206 - 25948061
Alignment:
Q  17 atgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgtt 116  Q
    ||||||||||||||| |||||||||| || | ||| | || || ||||||||| || || |||||||||| |||| |||| |||| ||| ||||||||||    
T  25948206 atgtgcaaatttgcacatgttaagaaatttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaataaataattgtt 25948107  T
Q  117 gtttttcaataaaaa--cttactagttttagttgttttaacatgtg 160  Q
    |||||||||||||||  || |||| ||||| ||| |||||||||||    
T  25948106 gtttttcaataaaaacgctaactacttttaattgctttaacatgtg 25948061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 34213952 - 34214105
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaa--tacataaatttttaatt 106  Q
    |||||| | |||||||||||||| |||||||||| || |||||||||| ||  ||||| |||||| | ||||| || | ||  || |||| ||||||       
T  34213952 tttctatcgtgtgcaaatttgcacatgttaagaaatttaaaatagtaatttttcattggaacttgaacattttttattaaaaatatataactttttataa 34214051  T
Q  107 aataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  34214052 aataattgttggttttcaataaaaacttactatttttagttgctttaacatgtg 34214105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 11660946 - 11661065
Alignment:
Q  33 atgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttttcaataaaaac 132  Q
    |||||||||||||  |||||||||||| |||||| ||||||||||||||||| | |||  |||| |||||||| |||||||||| || |||||||||||     
T  11660946 atgttaagaagttttaaatagtaactttgcattggaacttgtatattttgtattaaatgtataactttttaataaataattgtt-ttattcaataaaaat 11661044  T
Q  133 ttactagttttagttgtttta 153  Q
    || ||| ||||||||| ||||    
T  11661045 ttgctacttttagttgcttta 11661065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 157
Target Start/End: Complemental strand, 45062373 - 45062225
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| || ||||||||||||||||||||||||    ||| |||||||  ||||| || | || |  ||| |||||||| ||    
T  45062373 tttctatcatgtgcaaatttgcacatattaagaagttcaaaatagtaactttattttggaacttgtgcattttatattaaacatgtaactttttaataaa 45062274  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacat 157  Q
    ||||| |||||||| |||||||| |||| | ||||| ||||||||||||    
T  45062273 taatttttgttttttaataaaaagttaccacttttaattgttttaacat 45062225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 19228600 - 19228450
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||| ||||||||| |  ||| ||||||| | ||||||| | ||||  | || ||||||| ||    
T  19228600 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgt-aacttttaatcaa 19228502  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||||||| |||| |||||| ||||||||   ||||||||||    
T  19228501 taattgttggttttcaatgaaaagttactacttttagttaccttaacatgtg 19228450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 20566020 - 20566171
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||||||||||||| || ||||||||||||| ||| || ||  || | |||| ||||||| |||||| || | |||| ||||  ||||||| ||    
T  20566020 tttctatcatgtgcaaatttacacatgttaagaagtttaaagtattatgtttgtattggaacttgtgtattttttattaaatagataatattttaataaa 20566119  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||||||||||||||| | || ||| ||||||||  |||||||||||    
T  20566120 taattgttgtttttcaataaatagttgctatttttagttactttaacatgtg 20566171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 7757789 - 7757926
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||||||||||||| || |||||||||| || ||||||||||||| |||||| |||||| | |||||||| | |||| |||| |||||  | ||    
T  7757789 tttctatcatgtgcaaatttacacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaa 7757888  T
Q  109 taattgttgtttttcaataaaaacttactagttttagtt 147  Q
    ||||||||| |||| |||||||||||  || ||||||||    
T  7757889 taattgttggtttt-aataaaaacttgttacttttagtt 7757926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 14377599 - 14377449
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||| | ||| ||||||||| ||| ||||||||| |  ||||||||||| | |||| || | ||||  ||| |||| ||  ||    
T  14377599 tttctatcatgtgcaaatttgtacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtaactttt-aacaaa 14377501  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| ||||||||||||| |||||| |||||||||  ||||||||||    
T  14377500 taattgttggttttcaataaaaagttactacttttagttgccttaacatgtg 14377449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 23932740 - 23932589
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||||||  | | || | |||||||  ||||| || | | || | || |||||||| ||    
T  23932740 tttctatcatgtgcaaatttgcatatattaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataaaactttttaataaa 23932641  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||| |||||||||  ||| |||||| ||||||||  |||||||||||    
T  23932640 taattgttctttttcaatgtaaagttactatttttagttcctttaacatgtg 23932589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 27665047 - 27665197
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||| ||||||||| ||| ||||||||| |  ||| ||||||| | |||| || | ||||  | || ||||||| ||    
T  27665047 tttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgt-aacttttaataaa 27665145  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||||||| |||| |||||| |||||||||  ||||||||||    
T  27665146 taattgttggttttcaatgaaaagttactacttttagttgccttaacatgtg 27665197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 29157832 - 29157907
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgta 84  Q
    |||||| |||||||||||||||| |||||||||| ||  |||||||||||| |||||| |||||||||||||||||    
T  29157832 tttctatcatgtgcaaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgtatattttgta 29157907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 38248423 - 38248572
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| |||||||||| || |||||||||| ||  ||||| |||||| | |||||||| | |||| |||| |||||  | ||    
T  38248423 tttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaattttacattggaacttgaacattttgtattaaatatataattttttgttaaa 38248522  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||| ||||||||||| ||| ||||||||   ||||||||||    
T  38248523 taattgttggtttt-aataaaaacttgcta-ttttagttaccttaacatgtg 38248572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 43806535 - 43806384
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| | |||| ||||||||| ||||||| ||||| ||||||| || || | ||||||||||||| ||||  || | |||| | || |||| ||| ||    
T  43806535 tttctatcgtgtgtaaatttgcacatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaacttttgaataaa 43806436  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||||||| ||| ||||| |||||| | ||| |||||||||||||||    
T  43806435 taattgttgttttccaagaaaaagttactactattaattgttttaacatgtg 43806384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 162
Target Start/End: Complemental strand, 9747492 - 9747339
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||||||||||||| || ||||||||||||| |||||||||| || |  ||| |||||||  ||||| || | ||||  ||  ||||| |  ||    
T  9747492 tttctatcatgtgcaaattttcacatgttaagaagtttaaaatagtaattttgtcttggaacttgttcattttatattaaatatgtagcttttttacaaa 9747393  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtgta 162  Q
    || |||||||||||||||||| | |||||| ||||||||  |||||||||||||    
T  9747392 tagttgttgtttttcaataaatagttactacttttagttaatttaacatgtgta 9747339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 129
Target Start/End: Complemental strand, 9450432 - 9450312
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||||||||||| |||| |||||||||| || ||| |||||  || | |||| || |||| |||||| || | |||| |||| |||||||| ||    
T  9450432 tttctatcatgtgcaaatctgcacatgttaagaaatttaaagtagtatgtttgtattggaatttgtgtattttctattaaatatataattttttaataaa 9450333  T
Q  109 taattgttgtttttcaataaa 129  Q
    |||||||||||||||||||||    
T  9450332 taattgttgtttttcaataaa 9450312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 7720290 - 7720139
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||||||||||||||||  |||||| ||||| || |||| || || | |||| ||| |||| | || ||| | ||||   || |||| ||| ||    
T  7720290 tttctatcatgtgcaaatttgcacgtgttaaaaagtttaagatagaaattttgtattggaacgtgtacacttagtattaaatattaaacttttgaataaa 7720191  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||||||||||| ||||| |||||| | |||||||||||||||||||    
T  7720190 taattgttgtttttcaaaaaaaagttactactattagttgttttaacatgtg 7720139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 16126562 - 16126712
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||| |||||||||    ||||||||||| | |||| || | ||||  | |  ||||||| ||    
T  16126562 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatatgt-agcttttaatcaa 16126660  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||||||| |||| |||||| ||||||||   ||||||||||    
T  16126661 taattgttggttttcaatgaaaaattactacttttagttaccttaacatgtg 16126712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 16919159 - 16919307
Alignment:
Q  11 tctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaata 110  Q
    |||| |||||||||||||||| || |||| ||||| ||| ||||||||| |  ||||||||||| | |||| || | ||||  | || ||||||| ||||    
T  16919159 tctatcatgtgcaaatttgcacatattaacaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgt-aacttttaatcaata 16919257  T
Q  111 attgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||| ||||||| ||||| |||||| ||||||||   ||||||||||    
T  16919258 attgttggttttcaacaaaaagttactacttttagttaccttaacatgtg 16919307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 37471757 - 37471865
Alignment:
Q  23 aaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgttttt 122  Q
    ||||||||| ||||||||||||| ||||||||||||| |  |||||||||||  ||||| || | ||||  ||  |||||||| ||| |||||||| |||    
T  37471757 aaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaatatgtagttttttaataaattattgttgtcttt 37471856  T
Q  123 caataaaaa 131  Q
    |||||||||    
T  37471857 caataaaaa 37471865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 13351226 - 13351335
Alignment:
Q  21 gcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgttt 120  Q
    ||||||||||| ||||||||||||| ||| ||||||||| |  ||  ||||||| | |||| || ||||||  | || ||||||||||||||||||| ||    
T  13351226 gcaaatttgcacatgttaagaagtttaaagtagtaactttgacttagaacttgtgttttttatatttaatatgt-aacttttaattaataattgttgatt 13351324  T
Q  121 ttcaataaaaa 131  Q
    |||||||||||    
T  13351325 ttcaataaaaa 13351335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 4821443 - 4821320
Alignment:
Q  17 atgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgtt 116  Q
    ||||||||||||||| ||| ||||||||| ||| ||||||||| |  ||||||||||| | |||| || | ||||  | |  ||||||| ||||||||||    
T  4821443 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgatttgaaacttgtgttttttatattaaatatgt-agcttttaataaataattgtt 4821345  T
Q  117 gtttttcaataaaaacttactagtt 141  Q
    | |||||||| |||| |||||||||    
T  4821344 ggttttcaatgaaaagttactagtt 4821320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 35729292 - 35729188
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||||||||| |||||||||| ||||| ||||||| ||| ||| || ||   |||| ||||||| |||||| || | |||| ||||||||||||| ||    
T  35729292 tttctaacatgtacaaatttgcacatgttgagaagtttaaagtagcaaatttatattggaacttgtgtattttatagtaaatatataaatttttaataaa 35729193  T
Q  109 taatt 113  Q
    |||||    
T  35729192 taatt 35729188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 4576329 - 4576400
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattt 80  Q
    |||||| |||||||||||| |||||||||||||| || ||||||| || || | ||||||||||||| ||||    
T  4576329 tttctatcatgtgcaaattcgcatatgttaagaaatttaaaatagaaattttgtattgaaacttgtacattt 4576400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 12016841 - 12016691
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| || |||||||||| ||| |||||| ||    ||| ||||||| | |||| || | ||||  ||  |||| ||| ||    
T  12016841 tttctatcatgtgcaaatttgcacatattaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtagctttt-aatcaa 12016743  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| ||||||||||||| |||||| ||||||||   ||||||||||    
T  12016742 taattgttggttttcaataaaaagttactacttttagttaccttaacatgtg 12016691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 160
Target Start/End: Complemental strand, 22705621 - 22705479
Alignment:
Q  17 atgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgtt 116  Q
    ||||||||||||||| || |||||||||| ||| |||||| ||    ||||||||||| | |||| || | ||||  ||| |||  ||||||||||||||    
T  22705621 atgtgcaaatttgcacattttaagaagtttaaagtagtaattttaacttgaaacttgtgttttttatattaaatatgtaacttta-aattaataattgtt 22705523  T
Q  117 gtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    | |||||||| |||| |||||| ||||||||   ||||||||||    
T  22705522 ggttttcaatgaaaagttactacttttagttaccttaacatgtg 22705479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 25998005 - 25998156
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| || |||||||||||||| |||||| ||  | |||| | ||| || |||||| |||||||  ||||  |||| ||||  ||  |||||||| ||    
T  25998005 tttctatcacgtgcaaatttgcatgtgttaaaaaaattaaaaaattaattttgcattggaacttgttcatttaataataaatatgtatctttttaataaa 25998104  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||||||||||||||||| ||   | ||||||||  |||||||||||    
T  25998105 taattgttgtttttcaataaaaagttttcacttttagttactttaacatgtg 25998156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 26003349 - 26003420
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattt 80  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||| || || | ||||||| ||||| ||||    
T  26003349 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaatttgtacattt 26003420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 15231998 - 15231884
Alignment:
Q  17 atgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgtt 116  Q
    ||||||||||||||| ||||||||||||| ||| | ||||||| |  || ||||||||  ||||  || | ||||  ||| |||||||| ||||| | ||    
T  15231998 atgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttaaaacttgtgcatttcatattaaatatgtaactttttaataaataagtttt 15231899  T
Q  117 gtttttcaataaaaa 131  Q
    |||||||||||||||    
T  15231898 gtttttcaataaaaa 15231884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 43388858 - 43388920
Alignment:
Q  98 tttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||| ||||||||||| ||||||||||||| || ||| ||||||||| ||||| |||||    
T  43388858 tttttaataaataattgttgattttcaataaaaaatttctacttttagttgctttaagatgtg 43388920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 17234955 - 17235028
Alignment:
Q  23 aaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataa 96  Q
    ||||||||| |||||||||| || |||||||||| || | |||| || |||||||||||||| |||||| ||||    
T  17234955 aaatttgcacatgttaagaaatttaaaatagtaattttgtattggaatttgtatattttgtatttaatatataa 17235028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 43388484 - 43388525
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaa 50  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  43388484 tttctatcatgtgcaaatttgcacatgttaagaagttcaaaa 43388525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 8065298 - 8065254
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatag 53  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||    
T  8065298 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatag 8065254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 27865873 - 27865976
Alignment:
Q  64 ttgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtgtaa 163  Q
    |||||||||||||| |||  ||| |||| || | |||||||| | | ||||||||||||||||||||| ||| || ||||||||  |||||||| || ||    
T  27865873 ttgaaacttgtatacttttcaataaatatatcagtttttaataattgattgttgtttttcaataaaaa-ttattacttttagtttctttaacatatgcaa 27865971  T
Q  164 cgttg 168  Q
    |||||    
T  27865972 cgttg 27865976  T

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Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 2544245 - 2544320
Alignment:
Q  41 aagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgtt 116  Q
    |||||||||||||||| || | ||| |||||||| |||||| || |||||  |||| |||||||| ||||||||||    
T  2544245 aagttcaaaatagtaagtttgtattaaaacttgtgtattttatatttaatgtataattttttaataaataattgtt 2544320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 29142249 - 29142102
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||||||||||||| || ||||| ||||||| || |||| || || | |||  |||||||| ||||  || | |||| | || |||| ||| |     
T  29142249 tttctatcatgtgcaaatttacacatgtttagaagtttaatatagaaattttgtattttaacttgtacatttaatattaaatataaaatttttgaataag 29142150  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaaca 156  Q
    ||||||||||||||||| ||||| |||||| | |||||| ||| ||||    
T  29142149 taattgttgtttttcaagaaaaagttactactattagttttttgaaca 29142102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 40503082 - 40503136
Alignment:
Q  107 aataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtgt 161  Q
    ||||||||||| ||||||||||||||||  || ||||| ||||||||| ||||||    
T  40503082 aataattgttggttttcaataaaaacttgttacttttaattgttttaatatgtgt 40503136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 3504543 - 3504494
Alignment:
Q  111 attgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||| |||||||||||||| |||||| ||| ||||| |||||||||||    
T  3504543 attgttatttttcaataaaaagttactactttcagttgctttaacatgtg 3504494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 158
Target Start/End: Original strand, 36612758 - 36612883
Alignment:
Q  33 atgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttttcaataaaaac 132  Q
    ||||||||||||| ||||||  || || | ||| ||||||||| ||||  || | |||| | || |||| ||| ||||| ||||||||| ||| |||||     
T  36612758 atgttaagaagtttaaaataaaaattttgtattaaaacttgtacatttaatattaaatataaaacttttgaataaataaatgttgttttccaaaaaaaag 36612857  T
Q  133 ttactagttttagttgttttaacatg 158  Q
    |||||| | |||||| ||||||||||    
T  36612858 ttactactattagttattttaacatg 36612883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 158
Target Start/End: Original strand, 36620609 - 36620734
Alignment:
Q  33 atgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttttcaataaaaac 132  Q
    ||||||||||||| ||||||  || || | ||| ||||||||| ||||  || | |||| | || |||| ||| ||||| ||||||||| ||| |||||     
T  36620609 atgttaagaagtttaaaataaaaattttgtattaaaacttgtacatttaatattaaatataaaacttttgaataaataaatgttgttttccaaaaaaaag 36620708  T
Q  133 ttactagttttagttgttttaacatg 158  Q
    |||||| | |||||| ||||||||||    
T  36620709 ttactactattagttattttaacatg 36620734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 39904140 - 39904201
Alignment:
Q  99 ttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||| ||||||||||| |||||||| |||| |||||| ||||||||   ||||||||||    
T  39904140 ttttaatcaataattgttgattttcaatgaaaagttactacttttagttaccttaacatgtg 39904201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 6109564 - 6109528
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagtt 45  Q
    |||||| |||||||||||||||| |||||||||||||    
T  6109564 tttctatcatgtgcaaatttgcacatgttaagaagtt 6109528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 8770896 - 8770936
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaa 56  Q
    |||||||||||||||| ||||||||||||| ||| ||||||    
T  8770896 catgtgcaaatttgcacatgttaagaagtttaaagtagtaa 8770936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 11660897 - 11660933
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagtt 45  Q
    |||||| |||||||||||||||| |||||||||||||    
T  11660897 tttctatcatgtgcaaatttgcacatgttaagaagtt 11660933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 39367154 - 39367086
Alignment:
Q  89 atacataaatttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacat 157  Q
    |||||||| |||||||| ||||||| ||| ||||||||||||  ||  || ||||||||| ||||||||    
T  39367154 atacataactttttaataaataattattgattttcaataaaattttgttaattttagttgctttaacat 39367086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 8091315 - 8091466
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||||||||||||| || ||||||||||||| ||||||||||||| |||||| ||||| || |||||||  | |||| |||| |||||||| ||    
T  8091315 tttctatcatgtgcaaatttacacatgttaagaagtttaaaatagtaactttgcattgtaacttttacattttgtgttaaatatataactttttaataaa 8091414  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||| ||| ||||||||||||| || ||| ||||||||| ||| |||||||    
T  8091415 taattattgattttcaataaaaatttgctacttttagttgctttgacatgtg 8091466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 25709402 - 25709553
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||||||||| | |||| |||||||  ||||  || | ||||  ||  |||||||| ||    
T  25709402 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtattggaacttgttcatttcatattaaataggtagctttttaataaa 25709501  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    | |||||||||| |||||||||| |||||| ||||||||| |||||||||||    
T  25709502 ttattgttgtttatcaataaaaaattactacttttagttgatttaacatgtg 25709553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 47707901 - 47708045
Alignment:
Q  23 aaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgttttt 122  Q
    |||||| |||||||||||||||| |||||||||| || | |||||||||| || |||||||| | |||| |||| |||||||| ||||||||||||||||    
T  47707901 aaattttcatatgttaagaagtttaaaatagtaattttgaattgaaacttatacattttgtattaaatatataactttttaataaataattgttgttttt 47708000  T
Q  123 caataaaaacttactagttt---tagttgttttaacatgtgtaac 164  Q
    | |||||| |||  || |||   ||||||||||||||||||||||    
T  47708001 ccataaaatcttgttacttttagtagttgttttaacatgtgtaac 47708045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 46290185 - 46290035
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||||||| |||||| |||||| | |||||||| | |||| |||| |||||  | ||    
T  46290185 tttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaa 46290086  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||  ||||||||||||||| ||| ||||||||   ||||||||||    
T  46290085 taattgttg-gtttcaataaaaacttgctacttttagttaccttaacatgtg 46290035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 33343163 - 33343013
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||||||| | |||| |||||| | |||||||| | |||| |||| |||||  | ||    
T  33343163 tttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgtattggaacttgaacattttgtattaaatatataactttttgttaaa 33343064  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||  ||||||||||||||| ||| ||||||||   ||||||||||    
T  33343063 taattgttg-gtttcaataaaaacttgctacttttagttaccttaacatgtg 33343013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 34270436 - 34270312
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||||||| |||||| |||||| | |||||||| | |||| |||| |||||  | ||    
T  34270436 tttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaa 34270337  T
Q  109 taattgttgtttttcaataaaaactt 134  Q
    |||||||||  |||||||||||||||    
T  34270336 taattgttg-gtttcaataaaaactt 34270312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 157
Target Start/End: Complemental strand, 26300739 - 26300600
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgt 115  Q
    ||||| |||||||||| ||||||| ||||| ||||||||||||| | |||||||||||||||||||||| | |||  |||| |||||||| | |  || |    
T  26300739 catgtacaaatttgcacatgttaaaaagtttaaaatagtaactttgaattgaaacttgtatattttgtattaaatgtataactttttaataatt--tttt 26300642  T
Q  116 tgtttttcaataaaaacttactagttttagttgttttaacat 157  Q
    | |||||||||| | | ||| || ||||||||||||||||||    
T  26300641 tttttttcaatacagaattaatacttttagttgttttaacat 26300600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 160
Target Start/End: Original strand, 36548470 - 36548613
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgt 115  Q
    |||||||||||||||| ||||||||||||| ||| ||||||||| |  || ||| |||||| |||| || | ||||  ||| | |||||| |||||||||    
T  36548470 catgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttaaaatttgtattttttatattaaatatgtaa-tatttaatcaataattgt 36548568  T
Q  116 tgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    || ||||||||||||| |||||| ||||||||   ||||||||||    
T  36548569 tggttttcaataaaaaattactacttttagttcccttaacatgtg 36548613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 4969948 - 4969797
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||| || || | |||| |||||||| ||||  || | |||| | || |||| ||| ||    
T  4969948 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttaaataaa 4969849  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||| | ||||| ||| |||||  ||||| | |||||||||||||||||||    
T  4969848 taattatagttttccaagaaaaagctactactattagttgttttaacatgtg 4969797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 9332136 - 9331986
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||| ||||||||| |  ||||||||||| | |||| || | ||||  | ||  |||||| ||    
T  9332136 tttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatatgt-aacatttaatcaa 9332038  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||||||| |||| |||||| ||||||||   ||||||||||    
T  9332037 taattgttgattttcaatgaaaagttactacttttagttaccttaacatgtg 9331986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 19889515 - 19889365
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||| ||||||||| ||| ||||||||| |  ||| ||||||| | |||| || | ||||  | || ||||||| ||    
T  19889515 tttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgt-aacttttaataaa 19889417  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||||||| |||| |||||| |||||||||  ||||||||||    
T  19889416 taattgttggttttcaatgaaaagttactacttttagttgccttaacatgtg 19889365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 45501634 - 45501483
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| || |||||||||| ||||||| || || | |||| |||||||| ||||  || | |||| | || | || ||| ||    
T  45501634 tttctatcatgtgcaaatttgcacatcttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaactgttgaataaa 45501535  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||||||| || ||||| |||||| | |||||| ||||||||||||    
T  45501534 taattgttgttttttaagaaaaagttactactattagttattttaacatgtg 45501483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 159
Target Start/End: Original strand, 23982758 - 23982908
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| | |||||||| || ||| ||||||||| |  ||| ||||||| |||||| || | ||||  ||| |||||||| |     
T  23982758 tttctatcatgtgcaaatttgcacacgttaagaaatttaaagtagtaactttgacttggaacttgtgtattttatattaaatatttaagtttttaataat 23982857  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgt 159  Q
    ||||||||| |||| ||| |||| |||||| |||||||||  |||||||||    
T  23982858 taattgttggttttgaatgaaaagttactacttttagttgccttaacatgt 23982908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 7040262 - 7040374
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgt 115  Q
    |||||||||||||||| ||||||||||||| ||| || ||  || |  ||| ||||||| |||||| || |||||| ||||||||||||| |||||||||    
T  7040262 catgtgcaaatttgcacatgttaagaagtttaaagtactatgtttgatttggaacttgtgtattttcta-ttaatatataaatttttaataaataattgt 7040360  T
Q  116 tgtttttcaataaa 129  Q
    |||||| |||||||    
T  7040361 tgttttccaataaa 7040374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 160
Target Start/End: Complemental strand, 19868234 - 19868138
Alignment:
Q  64 ttgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||||| |||||| || | |||| |||| ||||| || |||||||| ||||||||||| |||| |||||| |||||||||| ||||||||||    
T  19868234 ttgaaacttgtgtattttatattaaatatataactttttgataaataattggtgtttttcaatgaaaatttactacttttagttgtcttaacatgtg 19868138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 7170177 - 7170027
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||| ||||||||| ||| ||||||||| |  ||| |||||||  ||||| || | | ||  || ||||||||| |     
T  7170177 tttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaataat 7170078  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||  |||||||||||| |||||| |||||||||  ||||||||||    
T  7170077 taattgttg-gtttcaataaaaagttactatttttagttgccttaacatgtg 7170027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 24462958 - 24463108
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| |||||| |||||| |  || ||  ||||| ||||| || | ||||  ||  |||||||| ||    
T  24462958 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaataataactttgacttaaagtttgtacattttatattaaatatgtagttttttaataaa 24463057  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    || |||||| |||||||||| || |||||| |||||||||  ||||||||||    
T  24463058 tacttgttg-ttttcaataagaaattactacttttagttgccttaacatgtg 24463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 39757113 - 39757263
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||||||||    |||||| |||| | |||| || | ||||  | |  ||||||| ||    
T  39757113 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttaacttgaaatttgtgttttttatattaaatatgt-agcttttaatcaa 39757211  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||||||| |||| |||||| ||||||||   ||||||||||    
T  39757212 taattgttgattttcaatgaaaaattactacttttagttaccttaacatgtg 39757263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 5909285 - 5909435
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||| ||||||||| ||| ||||||||| ||| ||||||||| |  ||||||||||| | |||| || | ||||  | |  ||||||| ||    
T  5909285 tttctatcatgtgtaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgt-agcttttaataaa 5909383  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||||||| |||| |||||  |||||||||  ||||||||||    
T  5909384 taattgttggttttcaatgaaaagttactgcttttagttgccttaacatgtg 5909435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 88 - 159
Target Start/End: Complemental strand, 38554334 - 38554263
Alignment:
Q  88 aatacataaatttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgt 159  Q
    |||| |||||||||||||  |||||||||||||||||||||||| |||| | ||||||||  ||||||||||    
T  38554334 aatatataaatttttaatatataattgttgtttttcaataaaaatttacgatttttagttagtttaacatgt 38554263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 33072156 - 33072063
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaattttt 102  Q
    |||||| |||||||||||||| | |||||||||| || ||||||||||||| |||||| || ||| | |||||||| | |||| |||| |||||    
T  33072156 tttctatcatgtgcaaatttgtacatgttaagaaatttaaaatagtaactttgcattggaatttgaacattttgtattaaatatataacttttt 33072063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 7899489 - 7899617
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||| || || ||||| |||| || |  ||  |||||||||||||| || | |||| ||||  ||||||| ||    
T  7899489 tttctatcatgtgcaaatttgcacatgttaaaaaatttaaaatggtaagtttgtcttataacttgtatattttatattaaatatataacattttaataaa 7899588  T
Q  109 taattgttgtttttcaataaaaacttact 137  Q
    | |||| ||||||||||| |||| |||||    
T  7899589 ttattggtgtttttcaatgaaaaattact 7899617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 12085934 - 12086084
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||  ||||||||| |||  ||||| || |  ||||||||||| | |||| || | ||||  | || ||||||| ||    
T  12085934 tttctatcatgtgcaaatttgcacataataagaagtttaaataagtaattttgacttgaaacttgtgttttttatattaaata-tttaacttttaataaa 12086032  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||||||  |||| |||||| |||||||||  ||||||||||    
T  12086033 taattgttgattttcaacgaaaagttactacttttagttgccttaacatgtg 12086084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 26037268 - 26037197
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattt 80  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||| || || | |||| |||||||| ||||    
T  26037268 tttctatcatgtgcaaatttgcagatgttaagaagtttaaaatagaaattttgtattggaacttgtacattt 26037197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 38760034 - 38759975
Alignment:
Q  98 tttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacat 157  Q
    |||| ||| ||||||||||||||||||| ||||| |||||| | ||||||||||||||||    
T  38760034 ttttgaataaataattgttgtttttcaaaaaaaagttactattattagttgttttaacat 38759975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 3561881 - 3561931
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaactt 59  Q
    |||||| |||||||||||||||| ||||||||||||| ||| |||||||||    
T  3561881 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactt 3561931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 39869213 - 39869147
Alignment:
Q  94 taaatttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||||| | ||||||||| |||||||| |||| |||||| ||||||||  |||||||||||    
T  39869213 taaatttttaataattaattgttggttttcaatgaaaagttactatttttagtttctttaacatgtg 39869147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 18102233 - 18102298
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgt 74  Q
    |||||| |||||||||||||||| ||||||||||||| ||| || |||||| |  |||||||||||    
T  18102233 tttctatcatgtgcaaatttgcacatgttaagaagtttaaattaataactttgacttgaaacttgt 18102298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 160
Target Start/End: Original strand, 3530124 - 3530267
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgt 115  Q
    ||||||||||||| || || |||||| ||| | |||||||| ||   ||||||| ||||  ||||| ||   |||| |||| |||||||| |||||||||    
T  3530124 catgtgcaaatttacacatattaagacgtttagaatagtaagtttttattgaaatttgtgcattttatatcaaatatataattttttaataaataattgt 3530223  T
Q  116 tgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    || ||||||||||||| ||| || | ||| ||| |||||||||||    
T  3530224 tg-ttttcaataaaaaattattattcttaattgctttaacatgtg 3530267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 384444 - 384570
Alignment:
Q  20 tgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtt 119  Q
    |||||||||||| ||||||||||||| ||| |||||||||    ||| ||||||| | |||| || | ||||  ||  |||| ||| ||||||||||| |    
T  384444 tgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgttttttttatattaaatatgtagctttt-aatcaataattgttgat 384542  T
Q  120 tttcaataaaaacttactagttttagtt 147  Q
    ||||||| |||| |||||| ||||||||    
T  384543 tttcaatgaaaagttactacttttagtt 384570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 820544 - 820587
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaata 52  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||    
T  820544 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaata 820587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 22041729 - 22041772
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaata 52  Q
    |||||| ||||||||||||||||  |||||||||||||||||||    
T  22041729 tttctatcatgtgcaaatttgcacttgttaagaagttcaaaata 22041772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 28323310 - 28323172
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||| |||||| || ||||||| || || |||||| ||| ||   |||  ||||| || ||||| || |||||| |||| |||||||| ||    
T  28323310 tttctatcatgtgtaaatttacacatgttaaaaaatttaaaataataattttatattagaacttatacattttatatttaatatataattttttaataaa 28323211  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttg 148  Q
     ||| | ||||||| ||||||||||| |||||||||||||    
T  28323210 aaatcgctgttttt-aataaaaacttgctagttttagttg 28323172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 29398137 - 29398208
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattt 80  Q
    |||||| ||||| |||||||||| ||||||||||||| ||||||| || || | |||| |||||||| ||||    
T  29398137 tttctatcatgttcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacattt 29398208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 29692543 - 29692694
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||| | ||||||||||||| ||||||| || || | ||| ||||||| | | ||  ||   |  | | || |||| ||| ||    
T  29692543 tttctatcatgtgcaaatttgtacatgttaagaagtttaaaatagaaatttggtattaaaacttgcacaattaatatcaaggataaaacttttgaataaa 29692642  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||||||| ||| ||||| ||| || | |||||||||||||||||||    
T  29692643 taattgttgttttccaagaaaaaattaatattattagttgttttaacatgtg 29692694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 2276795 - 2276733
Alignment:
Q  64 ttgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttttcaat 126  Q
    ||||||||||| |||||| || | |||| |||| |||||||| |||||||| |||||||||||    
T  2276795 ttgaaacttgtgtattttatattaaatagataactttttaataaataattggtgtttttcaat 2276733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 24699217 - 24699160
Alignment:
Q  102 taattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||| |||||||||||||||||||| |||| |||||| ||||||| || ||||||||||    
T  24699217 taataaataattgttgtttttcaatgaaaagttacta-ttttagtagtcttaacatgtg 24699160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 240
Target Start/End: Complemental strand, 28805235 - 28805193
Alignment:
Q  198 agaataaagattggtagaaacccttaatatgtaaacccctttg 240  Q
    |||||||||||||||||| ||||||||| |||| |||||||||    
T  28805235 agaataaagattggtagacacccttaatgtgtatacccctttg 28805193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 31066828 - 31066890
Alignment:
Q  98 tttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||| |||| || |||||||| |||||||| |||||| ||||| || ||||||||||||    
T  31066828 tttttaataaatagttcttgttttttaataaaaagttactacttttacttattttaacatgtg 31066890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 39475926 - 39475872
Alignment:
Q  107 aataattgttgtttttcaataaaaac-ttactagttttagttgttttaacatgtg 160  Q
    ||||||||||||||||||| |||||  |||||| | |||||||||||||||||||    
T  39475926 aataattgttgtttttcaaaaaaaaagttactactattagttgttttaacatgtg 39475872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 41572372 - 41572285
Alignment:
Q  27 ttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgt 118  Q
    ||||| ||||||| ||||| ||||||||||||| ||||    |||| ||||||||||| | |||| |||| ||| |||| ||||||||||||    
T  41572372 ttgcacatgttaaaaagtttaaaatagtaactttgcat----acttatatattttgtattaaatatataactttctaataaataattgttgt 41572285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 42750458 - 42750412
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagta 55  Q
    |||||| ||| |||||||||||||||||||||||||| ||| |||||    
T  42750458 tttctatcatatgcaaatttgcatatgttaagaagtttaaagtagta 42750412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 12624798 - 12624690
Alignment:
Q  22 caaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttt 121  Q
    |||||||||| |||||||||| || ||||| |||| || |  || |||||||| |||||| || | |||| | || |||||||| |||||||| | ||||    
T  12624798 caaatttgcacatgttaagaaatttaaaatggtaagtttgtctt-aaacttgtgtattttatattaaatatacaagtttttaataaataattgatatttt 12624700  T
Q  122 tcaataaaaa 131  Q
    ||||||||||    
T  12624699 tcaataaaaa 12624690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 5833530 - 5833478
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcg 61  Q
    |||||| |||||||||||||||| ||||||| ||||| |||  ||||||||||    
T  5833530 tttctatcatgtgcaaatttgcacatgttaaaaagtttaaagcagtaacttcg 5833478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 131
Target Start/End: Original strand, 11680075 - 11680143
Alignment:
Q  63 attgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttttcaataaaaa 131  Q
    ||||||| || || ||||| || | |||| |||| |||||||| |||||||||||||||||||| ||||    
T  11680075 attgaaatttttacattttatattaaatatataactttttaataaataattgttgtttttcaattaaaa 11680143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 7e-30; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 131
Target Start/End: Complemental strand, 34941453 - 34941331
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||||||| |||||||| ||| ||||||||| |||||||||| || |||||| |||||||| |||||||| |||||| |||| |||||||| ||    
T  34941453 tttctatcatgtgcgaatttgcacatgataagaagtttaaaatagtaattttgcattggaacttgtacattttgtatttaatatataactttttaataaa 34941354  T
Q  109 taattgttgtttttcaataaaaa 131  Q
    || ||||||||||||||||||||    
T  34941353 tagttgttgtttttcaataaaaa 34941331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 168
Target Start/End: Complemental strand, 24685019 - 24684852
Alignment:
Q  2 ttttctctttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttt 101  Q
    |||| |||||||| |||||||||||||||| ||||||||||||| ||||||| || || |||||| |||||||| ||||  || | |||| | || ||||    
T  24685019 ttttgtctttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgtacatttaatattaaatataaaactttt 24684920  T
Q  102 taattaataattgttgtttttc-aataaaaacttactagttttagttgttttaacatgtgtaacgttg 168  Q
     ||| ||||||||||||||| | || ||||| |||||| | |||||||||||||||||||||| ||||    
T  24684919 gaataaataattgttgttttccaaaaaaaaagttactactattagttgttttaacatgtgtaatgttg 24684852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 27019435 - 27019284
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||||||||||| ||||| ||||||| || || | ||||||||||||| ||||  || | |||| | || |||| ||| ||    
T  27019435 tttctatcatgtgcaaatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaacttttgaataaa 27019336  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||||||| ||| ||||| |||||| | |||||||||||||||||||    
T  27019335 taattgttgttttccaagaaaaagttactactattagttgttttaacatgtg 27019284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 51691516 - 51691366
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||| ||||||||| |||||||||| ||  |||||||||||| |||||| ||||||||||||||| | | |||| |||  |||||||| ||    
T  51691516 tttctatcatgtgtaaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgtatattttgaattaaatatatagctttttaataaa 51691417  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||| ||  ||||||||||| |||||||| ||||||||| |||||||||||    
T  51691416 taattattagttttcaataaagacttacta-ttttagttgctttaacatgtg 51691366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 4779439 - 4779562
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| | ||| | || || ||||||||| || || |||||||||| |||| |||| |||| ||| ||    
T  4779439 tttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaataaa 4779538  T
Q  109 taattgttgtttttcaataaaaac 132  Q
    ||||||||||||||||||||||||    
T  4779539 taattgttgtttttcaataaaaac 4779562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 173
Target Start/End: Original strand, 13009783 - 13009922
Alignment:
Q  34 tgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttttcaataaaaact 133  Q
    ||||||||||||  |||||| |||||| ||||| ||||||||||||||||| | |||| |||  |||||| | ||||||| ||  |||||||||||||||    
T  13009783 tgttaagaagttttaaatagcaacttcacattggaacttgtatattttgtattaaatatatagctttttagtaaataattattagttttcaataaaaact 13009882  T
Q  134 tactagttttagttgttttaacatgtgtaacgttgttgta 173  Q
    || || |||||||||||||||||| || || |||||||||    
T  13009883 taatacttttagttgttttaacatatgcaatgttgttgta 13009922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 17409999 - 17409848
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||| ||||||||| ||||||| ||||| | |||| |||||||| ||||  || | |||| | |  |||| ||| ||    
T  17409999 tttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatataaattttttgaataaa 17409900  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||||||||||| ||||| |||||| | |||||||||||||||||||    
T  17409899 taattgttgtttttcaagaaaaagttactactattagttgttttaacatgtg 17409848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 160
Target Start/End: Complemental strand, 19468361 - 19468218
Alignment:
Q  17 atgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgtt 116  Q
    ||||||||||||||| ||||||||||||| ||||||| || || | ||||||||||||| ||||  || | |||| | || |||| ||| ||||||||||    
T  19468361 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaacttttgaataaataattgtt 19468262  T
Q  117 gtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||| ||| ||||| |||||| | |||||||||||||||||||    
T  19468261 gttttccaagaaaaagttactactattagttgttttaacatgtg 19468218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 160
Target Start/End: Original strand, 19450911 - 19451054
Alignment:
Q  17 atgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgtt 116  Q
    ||||||||||||||| ||||||||||||| ||||||| || || | |||| |||||||| ||||  || | |||| | || |||| ||| ||||||||||    
T  19450911 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttgaataaataattgtt 19451010  T
Q  117 gtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||| ||| ||||| |||||| | |||||||||||||||||||    
T  19451011 gttttccaagaaaaagttactactattagttgttttaacatgtg 19451054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 39877005 - 39876855
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||| ||||||||| |||||||||| || ||||||||||||| |||||| |||||| | ||||||||   |||| |||| |||||  | ||    
T  39877005 tttctatcatgtgtaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtatcaaatatataactttttgttaaa 39876906  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||  ||||||||||||||||||| ||||||||   ||||||||||    
T  39876905 taattgttg-gtttcaataaaaacttactacttttagttaccttaacatgtg 39876855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 52391473 - 52391322
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||| ||||||||| ||||||||||||| ||||||| || || | |||| |||||||| ||||  || | |||| | || |||| ||| ||    
T  52391473 tttctatcatgtgtaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttgaataaa 52391374  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||||||||||| ||||| |||||| | |||||| ||||||||||||    
T  52391373 taattgttgtttttcaaaaaaaagttactactattagttattttaacatgtg 52391322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 160
Target Start/End: Complemental strand, 2097037 - 2096895
Alignment:
Q  18 tgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttg 117  Q
    |||| ||||||||| ||||||||||||||||||| |||| || | |||| |||||||  ||||| || | |||| |||| |||||||| |||||||||||    
T  2097037 tgtgaaaatttgcacatgttaagaagttcaaaatggtaagtttgtattggaacttgtgcattttatattaaatatataactttttaataaataattgttg 2096938  T
Q  118 tttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||||||| ||   | ||||||||| |||||| ||||    
T  2096937 tttttcaataaaaagttgtcacttttagttgatttaacttgtg 2096895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 9759145 - 9759295
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||||| |||||||||| |||||||||| || ||||||||||||| |||||| || ||| | |||||||| | |||| |||| |||||  | ||    
T  9759145 tttctatcatgtacaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaagttgaacattttgtattaaatatataactttttgttaaa 9759244  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||  ||||||||||||||| ||| ||||||||   ||||||||||    
T  9759245 taattgttg-gtttcaataaaaacttgctacttttagttaccttaacatgtg 9759295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 16667387 - 16667538
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| |||||  ||| ||    ||||||||||| |||||| || | ||||  ||  |||||||| ||    
T  16667387 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatgataattttaacttgaaacttgtgtattttatattaaatatgtagctttttaataaa 16667486  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||| |||||||||||||| |||| |||||| |||||| ||| ||||||||||    
T  16667487 taagtgttgtttttcaatgaaaaattactacttttagatgtcttaacatgtg 16667538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 23545651 - 23545500
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||| ||||| ||||||  || || | |||| || ||||| ||||  || | |||| | || |||| ||| ||    
T  23545651 tttctatcatgtgcaaatttgcacatgttaataagtttaaaatataaattttgtattggaaattgtacatttaatattaaatataaaacttttgaataaa 23545552  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||||||||||| ||||| |||||| | |||||||||||||||||||    
T  23545551 taattgttgtttttcaagaaaaaattactactattagttgttttaacatgtg 23545500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 50352477 - 50352327
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||| |||||||||||| |||||||||| || |||||||||| || |||||| |||||| | |||||||| | |||| |||| |||||  | ||    
T  50352477 tttctatcatatgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaacttgaacattttgtattaaatatataactttttgttaaa 50352378  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||  ||||||||||||||| ||| ||||||||   ||||||||||    
T  50352377 taattgttg-gtttcaataaaaacttgctacttttagttaccttaacatgtg 50352327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 33632206 - 33632364
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||||||| |||||||| ||||||| ||||| ||||||| || ||   ||||||||||||| ||||  || | |||| | || |||| ||| ||    
T  33632206 tttctatcatgtgcgaatttgcacatgttaaaaagtttaaaatagaaatttat-attgaaacttgtacatttaatattaaatataaaacttttgaataaa 33632304  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtgtaacgttg 168  Q
    ||||||||||||||||| ||||| |||||| | ||||||||||| |||||| ||| ||||    
T  33632305 taattgttgtttttcaaaaaaaagttactactattagttgtttttacatgtataatgttg 33632364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 160
Target Start/End: Complemental strand, 40049725 - 40049583
Alignment:
Q  17 atgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgtt 116  Q
    ||||||||||||||| |||||||||| || |||||||||| || |||||| |||||  | ||||| || | |||| |||| |||||  | ||||||||||    
T  40049725 atgtgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaactttaacattttttattaaatatataattttttgttaaataattgtt 40049626  T
Q  117 gtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |  |||| |||||||||||||| ||||||||  |||||||||||    
T  40049625 g-gtttctataaaaacttactacttttagttactttaacatgtg 40049583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 49181247 - 49181096
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||||||||||||||||  ||||||||||||||||||||||| || | |||| |||||||  ||||| || | ||||  ||| |||| ||| ||    
T  49181247 tttctatcatgtgcaaatttgcacctgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaacttttcaataaa 49181148  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    | |||||||||||||||| |||  || ||| ||||||||   ||||||||||    
T  49181147 tgattgttgtttttcaattaaaggttgctacttttagtttccttaacatgtg 49181096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 55814028 - 55813920
Alignment:
Q  20 tgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtt 119  Q
    |||||||||||| ||||||| ||||| |||||| ||| || | ||||||| ||||| ||| |||| | |||| |||| |||||||| ||||||||||| |    
T  55814028 tgcaaatttgcacatgttaaaaagtttaaaataataattttgtattgaaatttgtacattctgtattaaatatataactttttaataaataattgttgat 55813929  T
Q  120 tttcaataa 128  Q
    |||||||||    
T  55813928 tttcaataa 55813920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 24297539 - 24297399
Alignment:
Q  17 atgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgtt 116  Q
    ||||| ||||||||| ||||||||||| | ||||||  || ||   ||| ||| ||||| ||||  ||||||||| | || |||| ||| ||||||||||    
T  24297539 atgtgtaaatttgcacatgttaagaagattaaaataaaaaatttatattaaaatttgtacatttaataattaatataaaacttttaaataaataattgtt 24297440  T
Q  117 gtttttcaataaaaacttactagttttagttgttttaacat 157  Q
    ||||||||| ||||| |||||| | ||| ||||||||||||    
T  24297439 gtttttcaaaaaaaaattactactattaattgttttaacat 24297399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 47326895 - 47327046
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||| | ||||||| |  ||| ||||| |  ||||  || | ||||  ||  |||||||| ||    
T  47326895 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaatatgtagttttttaataaa 47326994  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||| | |||||||||||| |||| |||||| |||||| ||| ||||||||||    
T  47326995 taagttttgtttttcaatgaaaaattactacttttagatgtcttaacatgtg 47327046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 47341691 - 47341842
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||| | ||||||| |  ||| ||||| |  ||||  || | ||||  ||  |||||||| ||    
T  47341691 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaatatgtagttttttaataaa 47341790  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||| | |||||||||||| |||| |||||| |||||| ||| ||||||||||    
T  47341791 taagttttgtttttcaatgaaaaattactacttttagatgtcttaacatgtg 47341842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 10658427 - 10658533
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgt 115  Q
    ||||||| |||||||| ||||||| || || |||||||||||||  |||||||||||| | |||||||| | |||| |||| |||||  | |||||||||    
T  10658427 catgtgctaatttgcacatgttaaaaaatttaaaatagtaactttacattgaaacttgaacattttgtattaaatatataactttttgttaaataattgt 10658526  T
Q  116 tgttttt 122  Q
    | |||||    
T  10658527 ttttttt 10658533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 10872572 - 10872678
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgt 115  Q
    ||||||| |||||||| ||||||| || || |||||||||||||  |||||||||||| | |||||||| | |||| |||| |||||  | |||||||||    
T  10872572 catgtgctaatttgcacatgttaaaaaatttaaaatagtaactttacattgaaacttgaacattttgtattaaatatataactttttgttaaataattgt 10872671  T
Q  116 tgttttt 122  Q
    | |||||    
T  10872672 ttttttt 10872678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 16069221 - 16069339
Alignment:
Q  20 tgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtt 119  Q
    |||||||||||| |||||||||||||  |||||| |  || | ||||||| ||||| ||||  || | |||| | |  |||||||| |||||||||||||    
T  16069221 tgcaaatttgcacatgttaagaagttttaaatagaatttttgtattgaaatttgtacatttaatattaaatataaatttttttaataaataattgttgtt 16069320  T
Q  120 tttcaataaaaacttacta 138  Q
    |||||||||||| ||||||    
T  16069321 tttcaataaaaaattacta 16069339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 37432879 - 37433008
Alignment:
Q  19 gtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgt 118  Q
    ||||||| ||||||||||||||||||| ||||||  || || | ||||||| ||||| ||||  || | |||| | || |||| ||| ||||||||||||    
T  37432879 gtgcaaacttgcatatgttaagaagtttaaaataaaaattttgtattgaaatttgtacatttaatactaaatataaaatttttaaataaataattgttgt 37432978  T
Q  119 ttttcaataaaaacttactagttttagttg 148  Q
    ||||||| | ||| |||||| | |||||||    
T  37432979 ttttcaaaacaaagttactactattagttg 37433008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 23553745 - 23553594
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||| ||||| ||| |||||||||    || ||| |||||| |||| || | ||||  | | |||||||| ||    
T  23553745 tttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttaacttaaaatttgtattttttatattaaatatgt-agtttttaatcaa 23553647  T
Q  109 taattgttgtttttcaat-aaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||||||| ||||| |||||| ||||||||   ||||||||||    
T  23553646 taattgttggttttcaataaaaaaattactatttttagttaccttaacatgtg 23553594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 49250338 - 49250410
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatatttt 81  Q
    |||||||||||||||||||||||||||||||||| || ||| ||| || ||   |||||||||||| ||||||    
T  49250338 tttctaacatgtgcaaatttgcatatgttaagaaatttaaagtagcaagtttatattgaaacttgtgtatttt 49250410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 4329769 - 4329635
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||||||||||| ||||| ||| ||||||||| |  |||||| || | | |||| || | ||||  | || ||||||| ||    
T  4329769 tttctatcatgtgcaaatttgcatatgttaaaaagtttaaagtagtaactttgacttgaaatttatgttttttatattaaatatgt-aacttttaatcaa 4329671  T
Q  109 taattgttgtttttcaataaaaacttactagtttta 144  Q
    |||| |||| |||||||| |||| |||||| |||||    
T  4329670 taatcgttggttttcaattaaaaattactactttta 4329635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 18882270 - 18882341
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattt 80  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||| || || | |||| |||||||| ||||    
T  18882270 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacattt 18882341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 23438322 - 23438192
Alignment:
Q  17 atgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgtt 116  Q
    ||||||||||||||| ||||| |||| || ||||||||||||| |  |||||||||||  ||||| || | ||||  |    ||||||| ||| ||||||    
T  23438322 atgtgcaaatttgcacatgttgagaattttaaaatagtaactttgttttgaaacttgttcattttata-taaatatgttgccttttaataaattattgtt 23438224  T
Q  117 gtttttcaataaaaacttactagttttagttg 148  Q
    ||||||||||||||| ||||||  ||||||||    
T  23438223 gtttttcaataaaaagttactacatttagttg 23438192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 159
Target Start/End: Complemental strand, 25843363 - 25843316
Alignment:
Q  112 ttgttgtttttcaataaaaacttactagttttagttgttttaacatgt 159  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  25843363 ttgttgtttttcaataaaaagttactacttttagttgctttaacatgt 25843316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 54495640 - 54495791
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||| | |||||||    ||| |||||||  ||||  || | ||||  ||  |||||||| ||    
T  54495640 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttaacttggaacttgtgcatttcatattaaatatgtagctttttaataaa 54495739  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||| | ||||||||||| ||||| |||||| |||||| | | ||||||||||    
T  54495740 taagttttgtttttcaaaaaaaaattactacttttagatatcttaacatgtg 54495791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 8736902 - 8736964
Alignment:
Q  98 tttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||| ||||| | ||||||||||||||||| |||||| |||||| ||| ||||||||||    
T  8736902 tttttaataaataagttttgtttttcaataaaaaattactacttttagatgtcttaacatgtg 8736964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 29190819 - 29190869
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaactt 59  Q
    |||||| |||||||||||||||| ||||||||||||| ||| |||||||||    
T  29190819 tttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactt 29190869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 35999950 - 36000000
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaactt 59  Q
    |||||| |||||||||||||||| ||||||||||||| ||| |||||||||    
T  35999950 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactt 36000000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 48910805 - 48910855
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaactt 59  Q
    |||||| ||| |||||||||||||||||||||||||| ||| |||||||||    
T  48910805 tttctatcatatgcaaatttgcatatgttaagaagtttaaagtagtaactt 48910855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 6875618 - 6875525
Alignment:
Q  67 aaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||| |||||| || | |||  |||| |||| ||| |||||||| | |||| ||||||||  |||||| |||||||||||||||||||||    
T  6875618 aaacttgtgtattttatattaaatttataacttttcaataaataattgatattttccaataaaatattactatttttagttgttttaacatgtg 6875525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 33288352 - 33288267
Alignment:
Q  40 gaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttttcaa 125  Q
    |||||| |||||||||| ||   ||| ||||||||| |||||||| | ||||||||| |||||||  ||||||||||| |||||||    
T  33288352 gaagtttaaaatagtaaatttatattaaaacttgtacattttgtattaaatacataattttttaacaaataattgttggttttcaa 33288267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 144
Target Start/End: Original strand, 54506463 - 54506556
Alignment:
Q  51 tagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttttcaataaaaacttactagtttta 144  Q
    |||||| || |||||||||| ||||||||||||| | |||| | || |||||||  ||| ||||||||| ||||||||| |||| ||| |||||    
T  54506463 tagtaagtttgcattgaaacatgtatattttgtattaaatatacaattttttaacaaatgattgttgttcttcaataaatacttgctattttta 54506556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 36000032 - 36000080
Alignment:
Q  99 ttttaattaataattgttgtttttcaataaaaacttactagttttagtt 147  Q
    ||||||| ||||||||||| ||||||||||||| |||||| ||||||||    
T  36000032 ttttaatcaataattgttggttttcaataaaaagttactacttttagtt 36000080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 41415567 - 41415698
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgt 115  Q
    |||||||||||||||| ||| ||| ||||| ||| ||||||||| |  |||||| |||| | |||| || | ||||  ||  |||| ||| |||||||||    
T  41415567 catgtgcaaatttgcacatgataataagtttaaagtagtaactttgacttgaaatttgtgttttttatattaaatatgtagctttt-aataaataattgt 41415665  T
Q  116 tgtttttcaataaaaacttactagttttagttg 148  Q
    || |||||||| |||| |||||| |||||||||    
T  41415666 tgattttcaattaaaagttactacttttagttg 41415698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 49228829 - 49228779
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaactt 59  Q
    |||||| ||||||||||||||||  |||||||||||| ||| |||||||||    
T  49228829 tttctatcatgtgcaaatttgcacgtgttaagaagtttaaattagtaactt 49228779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 50
Target Start/End: Original strand, 13214427 - 13214460
Alignment:
Q  17 atgtgcaaatttgcatatgttaagaagttcaaaa 50  Q
    ||||||||||||||| ||||||||||||||||||    
T  13214427 atgtgcaaatttgcacatgttaagaagttcaaaa 13214460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 23051385 - 23051450
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgt 74  Q
    |||||| |||||||||||||||| ||| |||||| || ||| ||||||||| |  |||||||||||    
T  23051385 tttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgt 23051450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 3085428 - 3085376
Alignment:
Q  108 ataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||||||| ||||| |||||| | ||| |||||||||||||||    
T  3085428 ataattgttatttttcaagaaaaaattactactattaattgttttaacatgtg 3085376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 3085845 - 3085801
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatag 53  Q
    |||||| |||||||||||||||| || |||||||||| |||||||    
T  3085845 tttctatcatgtgcaaatttgcacattttaagaagtttaaaatag 3085801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 10389360 - 10389424
Alignment:
Q  99 ttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtgtaa 163  Q
    ||||||| ||||||||||| |||||||| |||| ||| || ||||||||  | ||||||||||||    
T  10389360 ttttaatcaataattgttggttttcaattaaaagttaatacttttagttactataacatgtgtaa 10389424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 27362566 - 27362530
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagtt 45  Q
    |||||| |||||||||||||||| |||||||||||||    
T  27362566 tttctatcatgtgcaaatttgcacatgttaagaagtt 27362530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 42480004 - 42480076
Alignment:
Q  88 aatacataaatttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||| |||| |||||||| |||||||| |||||||||||||||  || ||| | ||||||| ||||| |||||    
T  42480004 aatatataactttttaataaataattgatgtttttcaataaaatgttgctactcttagttgctttaagatgtg 42480076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 48910894 - 48910942
Alignment:
Q  99 ttttaattaataattgttgtttttcaataaaaacttactagttttagtt 147  Q
    ||||||| ||||||||||  ||||||||||||| |||||| ||||||||    
T  48910894 ttttaatcaataattgttaattttcaataaaaaattactacttttagtt 48910942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 3306058 - 3306208
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||||||| ||||||||||||| | ||||||||   |||| |||| |||||  | ||    
T  3306058 tttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtatcaaatatataactttttgttaaa 3306157  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||  ||||||||||||||||||| ||||||||   ||||||||||    
T  3306158 taattgttg-gtttcaataaaaacttactacttttagttaccttaacatgtg 3306208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 40225990 - 40226143
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| | ||| | || || ||||||||| || || |||||||||| |||| |||| |||| ||| ||    
T  40225990 tttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaataaa 40226089  T
Q  109 taattgttgtttttcaataaaa--acttactagttttagttgttttaacatgtg 160  Q
    ||||||||||||||||||||||  ||| |||| ||||| ||| |||||||||||    
T  40226090 taattgttgtttttcaataaaaacactaactacttttaattgctttaacatgtg 40226143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 5573461 - 5573308
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||| | ||||||||||||| |||||| ||  || |||||  ||||| || |||||||| |  ||| |||| |||||||| ||    
T  5573461 tttctatcatgtgcaaatttgtacatgttaagaagtttaaaataatacttttgcattagaacttatacattttgtatt--atatataactttttaataaa 5573364  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtgtaac 164  Q
    | ||||||||||||||||||||||||  || |||||||| ||||||||||||||||    
T  5573363 tgattgttgtttttcaataaaaacttgttatttttagttattttaacatgtgtaac 5573308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 157
Target Start/End: Complemental strand, 22838400 - 22838252
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||  |||||  |||| ||||||||||| |  ||| |  |||  ||| |||||||| ||    
T  22838400 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaataaaaactttacattaaaacttgtatagtacgtactatatatgtaattttttaataaa 22838301  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacat 157  Q
    ||||||||| |||| ||||||||||| ||||||| ||||| ||||||||    
T  22838300 taattgttgatttttaataaaaactttctagtttaagttgctttaacat 22838252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 2161562 - 2161412
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||||||| |||||| |||||| | |||||| | | |||| |||| |||||  | ||    
T  2161562 tttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgaattaaatatataactttttgttaaa 2161463  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||  ||||||||||||||| ||| ||||||||   ||||||||||    
T  2161462 taattgttg-gtttcaataaaaacttgctacttttagttaccttaacatgtg 2161412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 160
Target Start/End: Original strand, 35678285 - 35678428
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgt 115  Q
    |||||||||||||||| ||| ||||||||| ||| ||||||||| |  ||||||||||| |||||  || | ||||  |||||||||||| | |||||||    
T  35678285 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgtattta-tattaaatatgtaaatttttaataattaattgt 35678383  T
Q  116 tgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    || |||||||| |||| |||||| ||||||||  |||||||||||    
T  35678384 tggttttcaatgaaaagttactacttttagtttctttaacatgtg 35678428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 12189591 - 12189742
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||| ||||||||| ||||||| |||||   |||| |||||||| ||||  || | |||| | |  |||| ||| ||    
T  12189591 tttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatataaattttttgaataaa 12189690  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||||||||||| ||||| ||| || | |||||||||||||||||||    
T  12189691 taattgttgtttttcaagaaaaagttaatactcttagttgttttaacatgtg 12189742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 12434019 - 12434170
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||| ||||||||| ||||||| |||||   |||| |||||||| ||||  || | |||| | |  |||| ||| ||    
T  12434019 tttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatataaattttttgaataaa 12434118  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||||||||||| ||||| ||| || | |||||||||||||||||||    
T  12434119 taattgttgtttttcaagaaaaagttaatactcttagttgttttaacatgtg 12434170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 14816129 - 14816279
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||| |||||| || ||| ||||||||| |  || |||||||| |||||  || | ||||  |||||||||||| |     
T  14816129 tttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgtgtattta-tattaaatatgtaaatttttaataat 14816227  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| ||||||||||||| |||||| ||||||||  |||||||||||    
T  14816228 taattgttggttttcaataaaaagttactacttttagtttctttaacatgtg 14816279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 14829611 - 14829461
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||| |||||| || ||| ||||||||| |  || |||||||| |||||  || | ||||  |||||||||||| |     
T  14829611 tttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgtgtattta-tattaaatatgtaaatttttaataat 14829513  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| ||||||||||||| |||||| ||||||||  |||||||||||    
T  14829512 taattgttggttttcaataaaaagttactacttttagtttctttaacatgtg 14829461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 159
Target Start/End: Original strand, 36967080 - 36967223
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgt 115  Q
    |||||||||||||||| ||||||||||||| ||||||| ||||| | ||||||||||| | ||||  || | |||| | || |||| |||  ||||||||    
T  36967080 catgtgcaaatttgcacatgttaagaagtttaaaatagaaactttgtattgaaacttgcacatttaatattaaatataaaacttttgaatatataattgt 36967179  T
Q  116 tgtttttcaataaaaacttactagttttagttgttttaacatgt 159  Q
    |||||| ||| ||||| |||||| | |||||||| |||||||||    
T  36967180 tgttttccaagaaaaagttactactattagttgtcttaacatgt 36967223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 8284571 - 8284723
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaa-tttttaatta 107  Q
    |||||| |||||||||||||| | ||||||||||||| ||| ||| |||||||  ||| ||||||| |||||| || | ||||  |    |||||||| |    
T  8284571 tttctatcatgtgcaaatttgtacatgttaagaagtttaaattagcaacttcgacttggaacttgtgtattttatattaaataggtggtctttttaataa 8284670  T
Q  108 ataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| ||||| |||||||| |||||| ||||||||| |||||||||||    
T  8284671 ataattgttcttttttaataaaaagttactacttttagttgctttaacatgtg 8284723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 160
Target Start/End: Original strand, 9580119 - 9580263
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgt 115  Q
    ||||||||||||| || ||||||||||||| ||||||| || || | ||||||||||||| ||||  || | |||| |    |||| ||| |||||||||    
T  9580119 catgtgcaaatttacacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataatttttttgaataaataattgt 9580218  T
Q  116 tgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||| ||| ||||| |||||| | |||||||||||||||||||    
T  9580219 tgttttccaagaaaaagttactactattagttgttttaacatgtg 9580263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 26682243 - 26682092
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| |||||||||| || ||| ||||||||| |  ||| |||||||  ||||| || | |||   ||  |||||||| ||    
T  26682243 tttctatcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatgtgtagctttttaataaa 26682144  T
Q  109 taattgttgtttttcaataaaaac-ttactagttttagttgttttaacatgtg 160  Q
    ||||||||||||| |||||||||  |||||| |||||||||||||||||||||    
T  26682143 taattgttgtttt-caataaaaaaattactacttttagttgttttaacatgtg 26682092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 12132158 - 12132007
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||| |||||| ||||| |||||||||| || ||| |||||| || | |||| |||||| | ||||| || | |||| |||| |||||||| ||    
T  12132158 tttctatcatctgcaaacttgcacatgttaagaaatttaaagtagtaagtttgtattggaacttgaacattttatattaaatatataactttttaataaa 12132059  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    || |||| ||||||||||||||| || ||| ||||||||  |||||||||||    
T  12132058 tacttgtggtttttcaataaaaagttgctacttttagtttctttaacatgtg 12132007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 13327944 - 13328081
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||| ||||||||| |  ||||||||||| | |||| || | ||||  | ||  |||||| ||    
T  13327944 tttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatatgt-aacatttaatcaa 13328042  T
Q  109 taattgttgtttttcaataaaaacttactagttttagtt 147  Q
    ||||||||| |||||||| |||| |||||| ||||||||    
T  13328043 taattgttggttttcaatgaaaagttactacttttagtt 13328081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 297258 - 297178
Alignment:
Q  21 gcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttt 101  Q
    ||||||||||| ||||||||||||| |||||| |||||| | ||||||||||||| |||||||| |||||| |||| ||||    
T  297258 gcaaatttgcacatgttaagaagtttaaaataataactttgtattgaaacttgtacattttgtatttaatatataactttt 297178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 37264597 - 37264525
Alignment:
Q  88 aatacataaatttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||||||| ||||||| ||| |||||||||| || |||||| |||||||||||||||||||||    
T  37264597 aatacataactttttaataaataattattgattttcaataacaatttactacttttagttgttttaacatgtg 37264525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 38212947 - 38213099
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||| || ||   ||||||||||||| || |  || | |||| | || |||| ||| ||    
T  38212947 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattgaaacttgtacatgtaatattaaatataaaacttttaaatgaa 38213046  T
Q  109 taattgttgtttttcaataaaa-acttactagttttagttgttttaacatgtg 160  Q
    |||||| |||||||||| |||| | |||| | | |||||||||||||||||||    
T  38213047 taattgctgtttttcaaaaaaacagttaccactattagttgttttaacatgtg 38213099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 20514808 - 20514657
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||| ||||||| | |||||||| || ||||| |||| || |  ||| |||||||| ||||| || | |||| |||| |||||||| ||    
T  20514808 tttctatcatgtgcatatttgcacaggttaagaaatttaaaatggtaagtttgtcttggaacttgtacattttatattaaatatataactttttaataaa 20514709  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||| | ||||||||||| || |||||| ||| ||||| |||| ||||||    
T  20514708 taattggtatttttcaataagaaattactactttaagttgctttaccatgtg 20514657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 26363993 - 26364143
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||  |||||||||| || ||||||||||||| |||||| |||||| | ||||| || | | |  |||| |||||  | ||    
T  26363993 tttctatcatgtgcaaatttgcgcatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttctattaattgtataactttttgttaaa 26364092  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||| ||||||||||| ||| ||||||||   ||||||||||    
T  26364093 taattgttgatttt-aataaaaactttctacttttagttaccttaacatgtg 26364143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 38843879 - 38843728
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||| ||||||||| ||| ||||||||| ||||||  || ||   |||| |||||||| ||||  || | |||| | || |||| ||| ||    
T  38843879 tttctatcatgtgtaaatttgcacatgctaagaagtttaaaatataaattttttattggaacttgtacatttaatattaaatataaaacttttgaataaa 38843780  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||||||| ||| ||||| |||||| | |||||||||||||||||||    
T  38843779 taattgttgttttccaagaaaaagttactactattagttgttttaacatgtg 38843728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 16445747 - 16445892
Alignment:
Q  17 atgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgtt 116  Q
    ||||||||||||||| || |||||||||| ||||||| || || | |||| |||| ||| ||||  || | |||| | || |||| ||| ||||||||||    
T  16445747 atgtgcaaatttgcacatattaagaagtttaaaatagaaattttgtattggaact-gtacatttaatattaaatataaaacttttgaataaataattgtt 16445845  T
Q  117 gtttttcaataaaaacttactagttttagttgttttaacatgtgtaa 163  Q
    ||||| ||| ||||| |||||| | |||||||||||||||| |||||    
T  16445846 gttttccaagaaaaagttactactattagttgttttaacatatgtaa 16445892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 15198903 - 15198976
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttg 82  Q
    |||||| |||||||||||||||| ||||||| || ||  |||||||||||| |||||| |||||||||||||||    
T  15198903 tttctatcatgtgcaaatttgcacatgttaaaaaattttaaatagtaactttgcattgtaacttgtatattttg 15198976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 157
Target Start/End: Complemental strand, 6818192 - 6818044
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||| | ||||||||||||| ||||||||||  | | || | |||||||  ||||| || | | || | || |||||||| ||    
T  6818192 tttctatcatgtgcaaatttgtacatgttaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataaaactttttaataaa 6818093  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacat 157  Q
    |||||||| |||||||||  ||| |||||| ||||||||  ||||||||    
T  6818092 taattgttctttttcaatgtaaagttactatttttagttcctttaacat 6818044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 9801836 - 9801709
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgt 115  Q
    |||||||||||||||| ||||||||||||| ||| ||||||||| |  ||||||||| | | | || || | |||| || || ||||||| |||||||||    
T  9801836 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttgaaacttatgtttgttatattaaatatat-aacttttaatcaataattgt 9801738  T
Q  116 tgtttttcaataaaaacttactagtttta 144  Q
    || |||||||| |||| |||||| |||||    
T  9801737 tgattttcaatgaaaagttactactttta 9801709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 28014861 - 28014973
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||| || || | |||| |||||||| ||||  || | |||| | || |||| ||| ||    
T  28014861 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttgaataaa 28014960  T
Q  109 taattgttgtttt 121  Q
    |||||||||||||    
T  28014961 taattgttgtttt 28014973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 157
Target Start/End: Complemental strand, 44091493 - 44091346
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||| |||||||||||||||||||| || ||| ||||||||| |  ||  |||||||  ||||| || | |||   ||  |||||||| ||    
T  44091493 tttctatcatgtgtaaatttgcatatgttaagaaatttaaagtagtaactttgatttagaacttgtgcattttatattaaatttgtagttttttaataaa 44091394  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacat 157  Q
    ||||||||||||| ||||||||| ||| || |||| |||||||||||||    
T  44091393 taattgttgtttt-caataaaaaattaatacttttcgttgttttaacat 44091346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 7140462 - 7140612
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| || |||||||||| ||| |||||| ||    ||| ||||||| | |||| || | ||||  ||  |||||||| ||    
T  7140462 tttctatcatgtgcaaatttgcacatattaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtag-tttttaatcaa 7140560  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| ||||||||||||| |||||| ||||||||   ||||||||||    
T  7140561 taattgttggttttcaataaaaagttactacttttagttaccttaacatgtg 7140612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 9743947 - 9743888
Alignment:
Q  99 ttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatg 158  Q
    ||||||| ||||||||||| ||||||||||||| |||||| |||||||||| ||||||||    
T  9743947 ttttaataaataattgttggttttcaataaaaaattactacttttagttgtcttaacatg 9743888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 93 - 168
Target Start/End: Complemental strand, 12346097 - 12346022
Alignment:
Q  93 ataaatttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtgtaacgttg 168  Q
    |||| |||| ||| ||||||||||||||||||| ||||| |||||| | ||| |||||||||||||||||| ||||    
T  12346097 ataagttttgaataaataattgttgtttttcaagaaaaagttactactattaattgttttaacatgtgtaatgttg 12346022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 39701806 - 39701956
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||| ||||| ||| ||||||||| |  |||||| |||| | |||| || | ||||  | || |||||||||     
T  39701806 tttctatcatgtgcaaatttgcacatgttaacaagtttaaagtagtaactttgacttgaaatttgtgttttttatattaaatatgt-aacttttaattag 39701904  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||||||  |||| |||||| ||||||||   ||||||||||    
T  39701905 taattgttggttttcaacgaaaagttactacttttagttaccttaacatgtg 39701956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 160
Target Start/End: Complemental strand, 45006132 - 45005994
Alignment:
Q  21 gcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgttt 120  Q
    ||||||||||| ||||||||||||| ||||||| || || | |||| ||| |||| || |  || | |||| | || |||| ||| ||||||||||||||    
T  45006132 gcaaatttgcacatgttaagaagtttaaaatag-aattttgtattggaacatgtacatctaatattaaatataaaacttttgaataaataattgttgttt 45006034  T
Q  121 ttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    | ||| ||||| |||||| | |||||||||||||||||||    
T  45006033 tccaagaaaaagttactactattagttgttttaacatgtg 45005994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 27874684 - 27874796
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||  || || | |||| |||||||| ||||  || | |||| | || |||| ||| ||    
T  27874684 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatacaaattttgtattggaacttgtacatttaatattaaatataaaacttttgaataaa 27874783  T
Q  109 taattgttgtttt 121  Q
    |||||||||||||    
T  27874784 taattgttgtttt 27874796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 10129278 - 10129128
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||| |||||| ||    ||| ||||||| | |||| || | ||||  | |  ||||||| ||    
T  10129278 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgt-agcttttaatcaa 10129180  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||||||| |||| |||||| ||||||||   ||||||||||    
T  10129179 taattgttggttttcaatgaaaaattactaattttagttaccttaacatgtg 10129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 6850669 - 6850723
Alignment:
Q  98 tttttaattaataattgttgtttttcaataaaaacttactagttttagttgtttt 152  Q
    |||| ||| ||||||||||||||||||||||||| |||||| | |||||||||||    
T  6850669 ttttgaataaataattgttgtttttcaataaaaagttactactattagttgtttt 6850723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 18567419 - 18567469
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaactt 59  Q
    |||||| |||||||||||||||| ||||||||||||| ||| |||||||||    
T  18567419 tttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactt 18567469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 13496712 - 13496757
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagt 54  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||||    
T  13496712 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagt 13496757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 14961666 - 14961731
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgt 74  Q
    |||||| |||||||||||||||| ||| ||||||||| |||||||||| || | |||| |||||||    
T  14961666 tttctatcatgtgcaaatttgcacatgctaagaagtttaaaatagtaattttgtattggaacttgt 14961731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 35583517 - 35583430
Alignment:
Q  33 atgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttt 121  Q
    |||| |||||||| |||||| ||| ||  ||||||||||||| ||||||||| | |||| || |||||||||  |||||||||||||||    
T  35583517 atgtgaagaagtttaaaatattaagtttacattgaaacttgtgtattttgtattaaatatat-aatttttaacaaataattgttgtttt 35583430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 44222516 - 44222587
Alignment:
Q  88 aatacataaatttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||| ||| ||||||||| |||||||||||||||| ||||||||  |  |||||||||||| |||||||||||    
T  44222516 aatatatacatttttaataaataattgttgttttt-aataaaaagatgttagttttagttgctttaacatgtg 44222587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 4080397 - 4080531
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||| |||||| || ||| ||||||||| |  |||||||||||  | ||| || | ||||  |||||||||| | |     
T  4080397 tttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaat 4080495  T
Q  109 taattgttgtttttcaataaaaacttactagtttta 144  Q
    ||||||||  |||||||| |||| |||||| |||||    
T  4080496 taattgttagttttcaatgaaaagttactactttta 4080531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 10974646 - 10974705
Alignment:
Q  98 tttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacat 157  Q
    |||||||| |||| || ||||||||||||||||  |||||| ||||||||| ||||||||    
T  10974646 tttttaataaatagttattgtttttcaataaaatgttactacttttagttgctttaacat 10974705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 39024860 - 39024998
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||| ||||||||| ||| ||||||||| |  ||| || ||||  ||||| || | | ||  || ||||||||| |     
T  39024860 tttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgcattttatattaactatgtagatttttaataat 39024959  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttg 148  Q
    |||||||||  |||||||||||| ||| || |||||||||    
T  39024960 taattgttg-gtttcaataaaaagttattacttttagttg 39024998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 33430205 - 33430267
Alignment:
Q  98 tttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||| |||||||||||||||||||| || ||||| ||| || | ||||||||||||| |||||    
T  33430205 ttttgaattaataattgttgttttttaagaaaaagttattactattagttgttttaatatgtg 33430267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 34869614 - 34869672
Alignment:
Q  98 tttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaaca 156  Q
    |||| ||| |||||||||||||||| || ||||| |||||| | |||||||||||||||    
T  34869614 ttttgaataaataattgttgtttttgaagaaaaagttactattattagttgttttaaca 34869672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 152
Target Start/End: Complemental strand, 39430645 - 39430517
Alignment:
Q  25 atttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattg--ttgttttt 122  Q
    ||||||| ||||||| |||||  ||||||||||||   ||| ||| || |||||||| || | |||  || |||||||||| ||||||||  || |||||    
T  39430645 atttgcacatgttaaaaagttttaaatagtaactttatattaaaatttatatattttatattaaatgtat-aatttttaataaataattgtttttttttt 39430547  T
Q  123 caataaaaacttactagttttagttgtttt 152  Q
    |||| ||||||||||| |||||||| ||||    
T  39430546 caatcaaaacttactacttttagttttttt 39430517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 7750733 - 7750692
Alignment:
Q  119 ttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||||||| || ||| |||||||||||||||||||||    
T  7750733 ttttcaataaaaagttgctacttttagttgttttaacatgtg 7750692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 40568398 - 40568337
Alignment:
Q  100 tttaattaataattgttgtttttc-aataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||| ||| ||||||||||||  |||||||| |||| | |||||||||||||||||||||    
T  40568398 tttaataaatgattgttgtttttttaataaaaagttacaacttttagttgttttaacatgtg 40568337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 8140653 - 8140593
Alignment:
Q  99 ttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgt 159  Q
    ||||||| ||||||||||| |||||||| |||| | |||| |||||||||  |||||||||    
T  8140653 ttttaataaataattgttggttttcaatgaaaaatcactacttttagttgccttaacatgt 8140593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 32186361 - 32186317
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatag 53  Q
    |||||| | |||||||||||||||||||||| ||||| |||||||    
T  32186361 tttctatcgtgtgcaaatttgcatatgttaataagtttaaaatag 32186317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 4e-28; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 30591166 - 30591317
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||||||||||||| || |||||||||||||  |||| |||| || |||||| ||||||||||||||||| | |||  |||| ||||| || ||    
T  30591166 tttctatcatgtgcaaatttacacatgttaagaagttttaaatggtaattttgcattgtaacttgtatattttgtattaaatgtataactttttgataaa 30591265  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||  |||||||||||||||||||||  ||||||||  ||||||||||    
T  30591266 taattgtattttttcaataaaaacttactacatttagttgcgttaacatgtg 30591317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 168
Target Start/End: Complemental strand, 30623480 - 30623342
Alignment:
Q  30 catatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttttcaataaa 129  Q
    |||||||||||||||| ||||||| || || | ||||||||||||| ||||  || | |||| | || |||| ||| ||||||||||||||||||| |||    
T  30623480 catatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttgatattaaatataaaacttttgaataaataattgttgtttttcaagaaa 30623381  T
Q  130 aacttactagttttagttgttttaacatgtgtaacgttg 168  Q
    || |||||| | |||||||||||||||||||||| ||||    
T  30623380 aagttactactattagttgttttaacatgtgtaatgttg 30623342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 14228129 - 14228263
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||||||| |||||| |||||| | |||||||| | |||| |||| |||||  | ||    
T  14228129 tttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaa 14228228  T
Q  109 taattgttgtttttcaataaaaacttactagtttta 144  Q
    |||||||||  ||||||||||||||| ||| |||||    
T  14228229 taattgttg-gtttcaataaaaacttgctactttta 14228263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 28943772 - 28943906
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||||||| |||||| |||||| | |||||||| | |||| |||| |||||  | ||    
T  28943772 tttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaa 28943871  T
Q  109 taattgttgtttttcaataaaaacttactagtttta 144  Q
    |||||||||  ||||||||||||||| ||| |||||    
T  28943872 taattgttg-gtttcaataaaaacttgctactttta 28943906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 34692529 - 34692378
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||| || || | |||| |||||||| ||||  || | |||| | || |||| ||| ||    
T  34692529 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttaaataaa 34692430  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||| | ||||| ||| ||||| |||||| | |||||||||||||||||||    
T  34692429 taattatagttttccaagaaaaagttactactattagttgttttaacatgtg 34692378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 1017785 - 1017932
Alignment:
Q  13 taacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataat 112  Q
    ||||||||| |||||| || ||||||||||||| ||| ||||||||| |  |||||| ||||  ||||| || | ||||  |||||||||||| ||||||    
T  1017785 taacatgtgtaaatttacacatgttaagaagtttaaagtagtaactttgacttgaaagttgtgcattttatattaaatatgtaaatttttaataaataat 1017884  T
Q  113 tgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||| |||||||  |||| |||||| |||||||| ||| | ||||||    
T  1017885 tgttggttttcaacgaaaagttactacttttagttatttaatcatgtg 1017932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 10887204 - 10887053
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||| | |||| || |  ||| ||||||| |||||| || | ||||  ||  |||||||| ||    
T  10887204 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgatttggaacttgtgtattttatattaaatatgtagctttttaataaa 10887105  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||| | ||||||||||||||||| |||||| |||||| | | ||||||||||    
T  10887104 taagttttgtttttcaataaaaaattactacttttagatatcttaacatgtg 10887053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 17552590 - 17552740
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| |||||||||| || |||||||||| |  |||||| |||||| | |||||||| | |||| |||| |||||  | ||    
T  17552590 tttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaattatgcattggaacttgaacattttgtattaaatatataattttttgttaaa 17552689  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||  |||| |||||||||| ||| ||||||||   ||||||||||    
T  17552690 taattgttg-gtttcgataaaaacttgctacttttagttaccttaacatgtg 17552740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 31069585 - 31069735
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||||||||||||| || ||||||||||||| ||| ||||||||| |  ||| ||||||| | |||| || | ||||  |||  ||| ||| ||    
T  31069585 tttctatcatgtgcaaatttacacatgttaagaagtttaaattagtaactttgacttggaacttgtgttttttatattaaatatgtaacattt-aatcaa 31069683  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||||||||||||||||||| ||||||||   ||||||||||    
T  31069684 taattgttggttttcaataaaaacttactacttttagttaccttaacatgtg 31069735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 160
Target Start/End: Complemental strand, 33017891 - 33017749
Alignment:
Q  17 atgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgtt 116  Q
    ||||||||||||||| ||||||| || || ||||||||||||| |||| | |||||| | |||||||| | |||| |||| |||||  | ||||||||||    
T  33017891 atgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaatatataactttttgttaaataattgtt 33017792  T
Q  117 gtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    | |||| ||||||||||| ||| ||||||||   ||||||||||    
T  33017791 ggtttt-aataaaaacttgctaattttagttaccttaacatgtg 33017749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 6017031 - 6016880
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||| ||||| ||| | ||||||| |  ||| |||||||  ||||  || | |||| |||| |||||||  ||    
T  6017031 tttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatataactttttaaaaaa 6016932  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||| |||||||||||||| |||| |||||| |||||| ||| ||| ||||||    
T  6016931 taagtgttgtttttcaatgaaaagttactacttttagatgtcttaccatgtg 6016880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 8977469 - 8977620
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||| |||||||||  ||||||||||||||||||||||| || | |||| |||||||  ||||| || | ||||  ||| |||| ||| ||    
T  8977469 tttctatcatgtgtaaatttgcacttgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaacttttcaataaa 8977568  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    | |||||||||||||||| |||  || ||| ||||||||   ||||||||||    
T  8977569 tgattgttgtttttcaattaaaggttgctacttttagtttccttaacatgtg 8977620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 131
Target Start/End: Complemental strand, 31568284 - 31568163
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||| ||||| ||| ||||||||| |  ||||||||||| | |||| |||| ||||  ||  |||| || |||    
T  31568284 tttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttgatttgaaacttgtgttttttataataaatatgtagcttttgaa-taa 31568186  T
Q  109 taattgttgtttttcaataaaaa 131  Q
     |||||||| |||||||||||||    
T  31568185 aaattgttgattttcaataaaaa 31568163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 23936386 - 23936483
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataatt 113  Q
    |||||||||||||||| ||||||| ||||| || ||||||||||    ||| |||||||| ||||| || | ||||||||| |||||||| |||||||    
T  23936386 catgtgcaaatttgcacatgttaacaagtttaacatagtaactttcttttggaacttgtacattttatattaaatacataactttttaataaataatt 23936483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 28759028 - 28759142
Alignment:
Q  20 tgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtt 119  Q
    |||||||||||| |||||||||||||   |||| |||||| ||||| ||| |||||||||||||| | |||  || || ||||||| |||||||| | ||    
T  28759028 tgcaaatttgcacatgttaagaagttttgaataataactttgcattaaaagttgtatattttgtattaaatgtat-aacttttaataaataattgatttt 28759126  T
Q  120 tttcaataaaaactta 135  Q
      ||||||||||||||    
T  28759127 cgtcaataaaaactta 28759142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 29863305 - 29863352
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaa 56  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  29863305 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaa 29863352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 3261253 - 3261184
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatat 78  Q
    |||||| ||||||||||||| || ||||||| ||||| ||||||| ||||| |||||  |||||||||||    
T  3261253 tttctatcatgtgcaaatttacacatgttaaaaagtttaaaatagaaactttgcattagaacttgtatat 3261184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 153
Target Start/End: Complemental strand, 17141443 - 17141306
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgt 115  Q
    |||||||||||||||||||||||||| ||| || ||||||| || |  ||  ||||||   ||||| || | ||||  ||  |||||||| ||| |||||    
T  17141443 catgtgcaaatttgcatatgttaagatgtttaagatagtaattttgtcttagaacttgctcattttatattaaatatgtagctttttaataaattattgt 17141344  T
Q  116 tgtttttcaataaaaacttactagttttagttgtttta 153  Q
    ||||||| |||||||| | |||| ||||| ||||||||    
T  17141343 tgttttttaataaaaagtaactacttttaattgtttta 17141306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 29730374 - 29730305
Alignment:
Q  88 aatacataaatttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacat 157  Q
    |||| |||| |||||||| ||||| ||||||||||||||||||||||| || ||||| | | ||||||||    
T  29730374 aatatataactttttaataaataactgttgtttttcaataaaaacttattaattttaatagctttaacat 29730305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 18332691 - 18332842
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||||||||||||| || ||||||||||||| ||| |  ||| || |  ||| ||||| |  ||||  || | |||| |||  |||||||| ||    
T  18332691 tttctatcatgtgcaaattttcacatgttaagaagtttaaagtgataattttgacttggaacttatgcatttcatattaaatatatagctttttaataaa 18332790  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||| | ||||||||||||||||| |||||| |||||| | | ||||||||||    
T  18332791 taagttttgtttttcaataaaaaattactacttttagatatcttaacatgtg 18332842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 2830684 - 2830734
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaactt 59  Q
    |||||| ||||| |||||||||| ||||||||||||| |||||| ||||||    
T  2830684 tttctatcatgtacaaatttgcacatgttaagaagtttaaaataataactt 2830734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 3853118 - 3853068
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaactt 59  Q
    |||||| |||||||||||||||| |||||||||| || ||| |||||||||    
T  3853118 tttctatcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactt 3853068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 24979241 - 24979303
Alignment:
Q  98 tttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||| ||| |||||| || ||||||||| ||||| |||||| | |||||||||||||||||||    
T  24979241 ttttgaataaataatcgtcgtttttcaagaaaaagttactattattagttgttttaacatgtg 24979303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 2830773 - 2830834
Alignment:
Q  99 ttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||| ||||||||||| |||||||| |||| |||||| ||||||||   ||||||||||    
T  2830773 ttttaatcaataattgttggttttcaatgaaaagttactacttttagttaccttaacatgtg 2830834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 17596516 - 17596388
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||| | ||| ||||||||| ||| ||||||||| |  ||| |||||||  ||||| || | | ||  || ||||||||| |     
T  17596516 tttctatcatgtgcaaatttgtacatgataagaagtttaaagtagtaactttgatttggaacttgtgcattttatattaactatgtagatttttaataat 17596417  T
Q  109 taattgttgtttttcaataaaaacttacta 138  Q
    |||||||||  |||||||||||| ||||||    
T  17596416 taattgttg-gtttcaataaaaagttacta 17596388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 22974665 - 22974726
Alignment:
Q  99 ttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||| ||||||||||| |||||||| |||| |||||| ||||||||   ||||||||||    
T  22974665 ttttaatcaataattgttgattttcaatgaaaagttactacttttagttaccttaacatgtg 22974726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 23813736 - 23813675
Alignment:
Q  99 ttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||| ||||||||||| |||||||| |||| |||||| ||||||||   ||||||||||    
T  23813736 ttttaatcaataattgttgattttcaatgaaaagttactacttttagttaccttaacatgtg 23813675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 30708158 - 30708045
Alignment:
Q  17 atgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgtt 116  Q
    ||||| ||||| ||||  ||||||||||| || ||||||| ||  ||||  ||||| |||||||| || | |||| |||| ||||||||  |||||||||    
T  30708158 atgtgtaaattcgcattcgttaagaagtttaacatagtaatttttcattttaacttatatattttttattaaatatataactttttaatggataattgtt 30708059  T
Q  117 gtttttcaataaaa 130  Q
    |||||  |||||||    
T  30708058 gttttcaaataaaa 30708045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 13391850 - 13391806
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatag 53  Q
    |||||| |||||||||||||||  ||||||||||||| |||||||    
T  13391850 tttctatcatgtgcaaatttgcgcatgttaagaagtttaaaatag 13391806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 20979146 - 20979106
Alignment:
Q  10 ttctaacatgtgcaaatttgcatatgttaagaagttcaaaa 50  Q
    ||||| |||||||||||||||| ||||||||||||| ||||    
T  20979146 ttctatcatgtgcaaatttgcacatgttaagaagtttaaaa 20979106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 31503917 - 31503845
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatatttt 81  Q
    ||||||| ||||||||||||||| |||||||||| || ||| |||||| ||   |||| ||||||| ||||||    
T  31503917 tttctaatatgtgcaaatttgcacatgttaagaaatttaaagtagtaagtttatattggaacttgtgtatttt 31503845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 30839956 - 30839806
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||||||| |||||| |||||| | |||||||| | |||| |||| |||||  | ||    
T  30839956 tttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaa 30839857  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||  ||||||||||||||| ||| ||||||||   ||||||||||    
T  30839856 taattgttg-gtttcaataaaaacttgctacttttagttaccttaacatgtg 30839806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 36597754 - 36597604
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||||||| |||||| |||||| | |||||||| | |||| |||| |||||  | ||    
T  36597754 tttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaa 36597655  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||  |||||||||||| || ||| ||||||||   ||||||||||    
T  36597654 taattgttg-gtttcaataaaaatttgctacttttagttaccttaacatgtg 36597604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 160
Target Start/End: Original strand, 18841717 - 18841859
Alignment:
Q  18 tgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttg 117  Q
    |||||||||||||||||||||| ||||| ||||||| || || | ||||||| ||||| ||||  || | |||| | || |||| ||| |||||||||||    
T  18841717 tgtgcaaatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaatttgtacatttaatattaaatataaaacttttgaataaataattgttg 18841816  T
Q  118 tttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||| ||| ||||| |||||| | |||||||||||||||||||    
T  18841817 ttttccaaaaaaaagttactactattagttgttttaacatgtg 18841859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 160
Target Start/End: Original strand, 24014698 - 24014841
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgt 115  Q
    |||||| ||||||||| ||||||| |||||  ||||||||||||| ||||||||||||||||||||||| | |||| |||  |||||  | ||| ||| |    
T  24014698 catgtgaaaatttgcacatgttaaaaagttttaaatagtaacttcacattgaaacttgtatattttgtattaaatatatatctttttggtaaat-attat 24014796  T
Q  116 tgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |  |||| |||||||||||  || |||||||||||||||||||||    
T  24014797 tagttttgaataaaaactttatacttttagttgttttaacatgtg 24014841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 2795698 - 2795548
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||| ||||||||| |  ||| ||||||| | ||||||| | ||||  | || ||||||| ||    
T  2795698 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgt-aacttttaatcaa 2795600  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||||||| |||| |||||| ||||||||   ||||||||||    
T  2795599 taattgttggttttcaatgaaaagttactacttttagttaccttaacatgtg 2795548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 3398395 - 3398244
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||| || || | |||| |||||||| ||||  || | |||| | || |||| ||| ||    
T  3398395 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttaaataaa 3398296  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||| | ||||| ||| ||||| |||||| | |||||||||||||||||||    
T  3398295 taattatagttttccaagaaaaagttactactattagttgttttaacatgtg 3398244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 11636906 - 11636756
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||| ||||||||| ||| ||||||||| |  |||||||||||  ||||  || | ||||  |||||||||||| |     
T  11636906 tttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttaataat 11636808  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||||||| |||| |||||| ||||||||  |||||||||||    
T  11636807 taattgttggttttcaatgaaaagttactacttttagtttctttaacatgtg 11636756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 6863731 - 6863594
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||| || || |||||||||||||   |||| |||||| | |||||||| | |||| |||| |||||| | ||    
T  6863731 tttctatcatgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttatattggaacttgaacattttgtattaaatatataactttttattaaa 6863632  T
Q  109 taattgttgtttttcaataaaaacttactagttttagtt 147  Q
    |||||||||  ||||||||||||||| ||| ||||||||    
T  6863631 taattgttg-gtttcaataaaaacttgctacttttagtt 6863594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 15240953 - 15241096
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||| | ||||||| |||||||||||| ||| || | ||||||| ||||  || || || | |||| |||| |||||||| ||    
T  15240953 tttctatcatgtgcaaatttgtacatgttaaaaagttcaaaatattaaatttgtattgaaatttgtgcatgttatattaaatatataattttttaataaa 15241052  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgtttt 152  Q
    |||||||||||||||||| |||   ||||| |||||||| ||||    
T  15241053 taattgttgtttttcaatgaaatgatactatttttagttttttt 15241096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 40513126 - 40512976
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||||| |||||||||| ||||||| || || ||||||||||||| |||||| || ||| ||||||||||   |||| |||| |||||  | ||    
T  40513126 tttctatcatgtacaaatttgcacatgttaaaaaatttaaaatagtaactttgcattggaatttgaatattttgtatcaaatatataactttttgttaaa 40513027  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||  ||||||||||||||||||| || |||||   ||||||||||    
T  40513026 taattgttg-atttcaataaaaacttactacttctagttaccttaacatgtg 40512976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 134
Target Start/End: Complemental strand, 18150565 - 18150464
Alignment:
Q  33 atgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttttcaataaaaac 132  Q
    ||||||||||||| |||||||||| || || ||  ||||||||||||||||| | |||| ||||  ||||||| |||||||| |||| ||||||||||||    
T  18150565 atgttaagaagtttaaaatagtaattttgcgttagaacttgtatattttgtattaaatatataacattttaataaataattggtgttattcaataaaaac 18150466  T
Q  133 tt 134  Q
    ||    
T  18150465 tt 18150464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 40166448 - 40166332
Alignment:
Q  17 atgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgtt 116  Q
    ||||||||||||||| ||||||| || |  ||| ||| ||||  | ||||||||||||| |||||||| | |||| |||| ||||| || ||||||||||    
T  40166448 atgtgcaaatttgca-atgttaataaatctaaattagcaactatgtattgaaacttgtacattttgtattaaatatataactttttgataaataattgtt 40166350  T
Q  117 gtttttcaataaaaactt 134  Q
    ||||||||||||||||||    
T  40166349 gtttttcaataaaaactt 40166332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 8103583 - 8103733
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||| ||||||||| ||| ||||||||| |  ||| |||||||  ||||| || | | ||  || ||||||||| |     
T  8103583 tttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaataat 8103682  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||  |||||||||||| |||||| |||||||||  ||||||||||    
T  8103683 taattgttg-gtttcaataaaaagttactatttttagttgccttaacatgtg 8103733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 11249961 - 11250110
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||||| |||||||| | || ||| |||| | ||||||||||||| |||||||||| |||| |||||||| | || | |||| || ||| | ||    
T  11249961 tttctatcatgtacaaatttgtacatatta-gaagattaaaatagtaactttgcattgaaacatgtacattttgtattaaacatataatttattactaaa 11250059  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||||| || || ||||||| ||| ||||||||| |||||||||||    
T  11250060 taattgttgtttatc-attaaaacttgctacttttagttgctttaacatgtg 11250110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 30893804 - 30893754
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaactt 59  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||||||||    
T  30893804 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactt 30893754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 32019987 - 32020125
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| |||||||||| || ||||| |||| || |  ||| ||||||| |||| | || | |||| |||| ||||| | |||    
T  32019987 tttctatcatgtgcaaatttgcacatgttaagaaatttaaaatggtaagtttgtcttggaacttgtgtattctatattaaatagataacttttttaataa 32020086  T
Q  109 taattgttgtttttcaataaaaacttactagttttagtt 147  Q
    |||| | ||||||||||  |||| ||||||| |||||||    
T  32020087 taatcggtgtttttcaaagaaaagttactagatttagtt 32020125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 5958211 - 5958280
Alignment:
Q  94 taaatttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtgtaa 163  Q
    |||||||||||| | ||||||||| |||||||| |||| |||||| ||||||||  ||||||||||||||    
T  5958211 taaatttttaataattaattgttgattttcaatgaaaaattactacttttagtttctttaacatgtgtaa 5958280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 23995427 - 23995523
Alignment:
Q  17 atgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaatta--atacataaatttttaattaataa 111  Q
    ||||||||||||| | ||||||||||||| |||||||||| ||   ||||||||||||| |||||||| | |  ||| |||| ||||||||||||||    
T  23995427 atgtgcaaatttgtacatgttaagaagtttaaaatagtaattttatattgaaacttgtacattttgtattaaatatatataactttttaattaataa 23995523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 157
Target Start/End: Original strand, 26265071 - 26265197
Alignment:
Q  33 atgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttttc--aataaaa 130  Q
    ||||||||||||| ||||||| |  || | ||||||||||||||||||  || | |||| | || |||| ||| |||||||||||||||||  ||  |||    
T  26265071 atgttaagaagtttaaaatagaagttttgtattgaaacttgtatatttaatattaaatataaaacttttaaataaataattgttgtttttcataaataaa 26265170  T
Q  131 acttactagttttagttgttttaacat 157  Q
    | |||||| | ||||||||||||||||    
T  26265171 agttactactattagttgttttaacat 26265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 4047587 - 4047537
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaactt 59  Q
    |||||| |||||||||||||||| ||||||||||||| ||| |||||||||    
T  4047587 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactt 4047537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 131
Target Start/End: Original strand, 31365953 - 31366074
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||| | ||||||||||||| ||| ||||||||| |  ||| ||||||| | |||| || | ||||  | ||  |||||| ||    
T  31365953 tttctatcatgtgcaaatttgtacatgttaagaagtttaaattagtaactttgacttggaacttgtgttttttatattaaatatgt-aacatttaatcaa 31366051  T
Q  109 taattgttgtttttcaataaaaa 131  Q
    ||||||||| |||||||||||||    
T  31366052 taattgttggttttcaataaaaa 31366074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 31567494 - 31567632
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||| |||||||||||| ||||||| || || ||||| |||| || |  |||||| ||||  ||||| || | ||||  ||  |||||||| ||    
T  31567494 tttctatcatatgcaaatttgcacatgttaaaaaatttaaaatggtaattttgtcttgaaatttgttcattttatattaaatatgtagttttttaatgaa 31567593  T
Q  109 taattgttgtttttcaataaaaacttactagttttagtt 147  Q
    ||||| ||||||||||||||||| |||||  ||||||||    
T  31567594 taattattgtttttcaataaaaagttactctttttagtt 31567632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 35151387 - 35151329
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgt 74  Q
    |||||||||||||||||||||||| ||||| |||||||||| ||  ||||| |||||||    
T  35151387 catgtgcaaatttgcatatgttaaaaagtttaaaatagtaaatttacattgtaacttgt 35151329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 11360264 - 11360207
Alignment:
Q  107 aataattgttgtttttcaataaaaac-ttactagttttagttgttttaacatgtgtaa 163  Q
    ||||||| |||||||| ||||||||  |||||| ||||||||||||||||||||||||    
T  11360264 aataattattgttttttaataaaaaaattactacttttagttgttttaacatgtgtaa 11360207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 11376045 - 11375984
Alignment:
Q  99 ttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||| ||||||| ||| |||||||| |||| |||||| ||||||||| |||||||||||    
T  11376045 ttttaataaataattattgattttcaatgaaaagttactacttttagttgctttaacatgtg 11375984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 28629964 - 28629903
Alignment:
Q  99 ttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||| ||||||||||| |||||||| |||| ||| || ||||||||| |||||||||||    
T  28629964 ttttaataaataattgttggttttcaatgaaaagttattatttttagttgctttaacatgtg 28629903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 34578179 - 34578036
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgt 115  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||    || |||||||||| |||| || | ||||  | |  ||||||| || ||||||    
T  34578179 catgtgcaaatttgcacatgttaaaaagtttaaaatagtaactttaacttaaaacttgtattttttatattaaatatgt-agcttttaatcaacaattgt 34578081  T
Q  116 tgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    || |||||||| |||| ||| || ||||||||   ||||||||||    
T  34578080 tgattttcaatgaaaaattattacttttagttaccttaacatgtg 34578036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 15820401 - 15820274
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||  |||||| || |||| ||||| ||||||||||||| || | ||||||| ||| | ||||| || | |||| |  |  ||||||| ||    
T  15820401 tttctatcatgtttaaatttacacatgtcaagaaattcaaaatagtaaatttgtattgaaatttgaacattttctattaaatataataccttttaataaa 15820302  T
Q  109 taattgttgtttttcaataaaaacttac 136  Q
    ||||| ||||||||||||||||| ||||    
T  15820301 taattattgtttttcaataaaaaattac 15820274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 26376661 - 26376722
Alignment:
Q  98 tttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgt 159  Q
    |||| ||| ||||||||||||||| ||| ||||| |||||| | ||| ||||||||||||||    
T  26376661 ttttgaataaataattgttgttttccaagaaaaagttactactattatttgttttaacatgt 26376722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 36474639 - 36474703
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattt 80  Q
    |||||||||| ||||| || |||| ||||| ||||||| || || | ||||||||||||||||||    
T  36474639 catgtgcaaaattgcacatattaaaaagtttaaaatagaaattttgtattgaaacttgtatattt 36474703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 41350370 - 41350330
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaa 56  Q
    |||||||||||||||| ||||||||||||| ||| ||||||    
T  41350370 catgtgcaaatttgcacatgttaagaagtttaaagtagtaa 41350330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 160
Target Start/End: Original strand, 17802 - 17943
Alignment:
Q  20 tgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgttgtt 119  Q
    |||||||||||| ||||||  ||||| |||||||||||||   |||| |||||||| |||||||| | || | ||||||||||||| |||||||||| ||    
T  17802 tgcaaatttgcacatgttattaagttaaaaatagtaactttatattggaacttgtacattttgtattaaagatataaatttttaataaataattgttatt 17901  T
Q  120 tttcaataaaaacttactagttttag-ttgttttaacatgtg 160  Q
    ||||||||||| |||  || |||||| ||| |||||||||||    
T  17902 tttcaataaaagcttgttacttttagtttgctttaacatgtg 17943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 17999 - 18134
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| ||| ||||||||||||  |||||| | |||||||||||||  || | |||| || ||||| ||||| || | |||| |||| ||| |||| ||    
T  17999 tttctatcatatgcaaatttgcacgtgttaaaatgttcaaaatagtatgtttgtattggaatttgtacattttatattaaatatataactttctaataaa 18098  T
Q  109 taattgttgtttttcaataaaaacttactagtttta 144  Q
    |||||||||||||| ||| || | |||||| |||||    
T  18099 taattgttgttttttaattaagagttactactttta 18134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 52782 - 52932
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||| ||||||||| |  ||| ||||||| | ||||||| | ||||  | || ||||||| ||    
T  52782 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgt-aacttttaatcaa 52880  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||||||| |||| |||||| ||||||||   ||||||||||    
T  52881 taattgttggttttcaatgaaaagttactacttttagttaccttaacatgtg 52932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 145852 - 145702
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||| ||||||||| |  ||| ||||||| | ||||||| | ||||  | || ||||||| ||    
T  145852 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgt-aacttttaatcaa 145754  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||||||| |||| |||||| ||||||||   ||||||||||    
T  145753 taattgttggttttcaatgaaaagttactacttttagttaccttaacatgtg 145702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 16545 - 16657
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaataattgt 115  Q
    |||||||||||||||| ||||||||||||| ||| || ||  || |  ||| ||||||| |||||| || |||||| ||||||||||||| |||||||||    
T  16545 catgtgcaaatttgcacatgttaagaagtttaaagtaatatgtttgatttggaacttgtgtattttcta-ttaatatataaatttttaataaataattgt 16643  T
Q  116 tgtttttcaataaa 129  Q
    |||||| |||||||    
T  16644 tgttttccaataaa 16657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 44297 - 44384
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataa 96  Q
    |||||| |||||||||||||||| || |||| ||||| ||||||  ||||| ||||||||||||||||||||| || |||||| ||||    
T  44297 tttctatcatgtgcaaatttgcacatattaaaaagtttaaaataacaactttgcattgaaacttgtatattttttatttaataaataa 44384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 160
Target Start/End: Original strand, 44389 - 44431
Alignment:
Q  118 tttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    |||||||||||||| |||||| ||||| |||||||||||||||    
T  44389 tttttcaataaaaatttactacttttaattgttttaacatgtg 44431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 13566 - 13636
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatatt 79  Q
    ||||||| ||||||||||||||| ||||||||||||| ||| |||||| || |||||||||||||| ||||    
T  13566 tttctaatatgtgcaaatttgcacatgttaagaagtttaaattagtaagtttgcattgaaacttgtgtatt 13636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 157
Target Start/End: Original strand, 8417 - 8564
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||| |||||||||||||||||||| || ||| ||||||||| |  ||  |||||||  ||||| || | |||   ||  |||||||| ||    
T  8417 tttctatcatgtgtaaatttgcatatgttaagaaatttaaagtagtaactttgatttagaacttgtgcattttatattaaatttgtagttttttaataaa 8516  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacat 157  Q
    ||||||||||||| ||||||||| ||| || |||| |||||||||||||    
T  8517 taattgttgtttt-caataaaaaattaatacttttcgttgttttaacat 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 37117 - 37268
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||||||||| ||| |  |||||| |  ||| |||||||  ||||  || | ||||  ||  |||||||| ||    
T  37117 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtgataactttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaa 37216  T
Q  109 taattgttgtttttcaataaaaacttactagttttagttgttttaacatgtg 160  Q
    ||| | ||||||||||||||||| |||||| |||||| | | ||||||||||    
T  37217 taagttttgtttttcaataaaaaattactacttttagatatcttaacatgtg 37268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 41157 - 41094
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaactt 72  Q
    |||||| |||||| ||||||| ||||||||||||||| |||||| ||| || | ||||||||||    
T  41157 tttctatcatgtgtaaatttgtatatgttaagaagtttaaaataataattttgtattgaaactt 41094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 13260 - 13210
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaactt 59  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||||||||    
T  13260 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactt 13210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 98874 - 98935
Alignment:
Q  98 tttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgt 159  Q
    ||||||||||||| |||||||||||||| | ||| |||||| |||||||||||||| |||||    
T  98874 tttttaattaatagttgttgtttttcaaaagaaagttactaattttagttgttttatcatgt 98935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 108152 - 108213
Alignment:
Q  98 tttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgt 159  Q
    ||||||||||||| |||||||||||||| | ||| |||||| |||||||||||||| |||||    
T  108152 tttttaattaatagttgttgtttttcaaaagaaagttactaattttagttgttttatcatgt 108213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 5866 - 5715
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaacttcgcattgaaacttgtatattttgtaattaatacataaatttttaattaa 108  Q
    |||||| |||||||||||||||| ||||||| ||||| ||| |||||||||    || ||| |||||| |||| || | ||||  | | |||||||| ||    
T  5866 tttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttaacttaaaatttgtattttttatattaaatatgt-agtttttaatcaa 5768  T
Q  109 taattgttgtttttcaat-aaaaacttactagttttagttgttttaacatgtg 160  Q
    ||||||||| |||||||| ||||| |||||| ||||||||   ||||||||||    
T  5767 taattgttggttttcaataaaaaaattactatttttagttaccttaacatgtg 5715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 45500 - 45547
Alignment:
Q  9 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaatagtaa 56  Q
    |||||| ||||||||||||| ||||||| |||||||| ||||||||||    
T  45500 tttctatcatgtgcaaatttacatatgtaaagaagtttaaaatagtaa 45547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 43548 - 43503
Alignment:
Q  99 ttttaattaataattgttgtttttcaataaaaacttactagtttta 144  Q
    ||||||||||||||||||| |||||||| |||| |||||| |||||    
T  43548 ttttaattaataattgttgattttcaatgaaaaattactactttta 43503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 1453 - 1493
Alignment:
Q  16 catgtgcaaatttgcatatgttaagaagttcaaaatagtaa 56  Q
    |||||||||||||||| ||||||||||||| |||| |||||    
T  1453 catgtgcaaatttgcacatgttaagaagtttaaaagagtaa 1493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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