View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21078_low_3 (Length: 618)

Name: NF21078_low_3
Description: NF21078
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21078_low_3
NF21078_low_3
[»] chr3 (1 HSPs)
chr3 (23-599)||(25518004-25518588)
[»] chr4 (7 HSPs)
chr4 (354-608)||(27521322-27521573)
chr4 (354-603)||(27461862-27462108)
chr4 (354-603)||(27482001-27482247)
chr4 (351-603)||(18985959-18986208)
chr4 (283-359)||(27461737-27461813)
chr4 (283-359)||(27481876-27481952)
chr4 (285-342)||(27521614-27521671)
[»] chr5 (12 HSPs)
chr5 (354-603)||(29568361-29568616)
chr5 (354-603)||(1758010-1758256)
chr5 (381-603)||(29168141-29168363)
chr5 (354-588)||(29569707-29569924)
chr5 (419-588)||(27918574-27918743)
chr5 (434-603)||(29425232-29425404)
chr5 (283-348)||(29166790-29166855)
chr5 (283-359)||(1757885-1757961)
chr5 (283-348)||(29425113-29425177)
chr5 (354-384)||(29425206-29425236)
chr5 (317-359)||(29568665-29568707)
chr5 (354-387)||(29166896-29166929)


Alignment Details
Target: chr3 (Bit Score: 482; Significance: 0; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 23 - 599
Target Start/End: Original strand, 25518004 - 25518588
Alignment:
Q  23 atcataatcttgtatactatgtagcattcaatgattattacaattttactctacaaaatcattagaattgagctaaaatttcaaacaatttacctttata 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25518004 atcataatcttgtatactatgtagcattcaatgattattacaattttactctacaaaatcattagaattgagctaaaatttcaaacaatttacctttata 25518103  T
Q  123 gaatttcttaaatttcaacatataagcttgatatgcaaaattgacatgttttacaatggtaacatttcttcataataaacaagatgagnnnnnnntatta 222  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       | |||    
T  25518104 gaatttcttaaatttcaacatataaccttgatatgcaaaattgacatgttttacaatggtaacatttcttcataataaacaagatgagaaaaaaatctta 25518203  T
Q  223 gaaaaataacaacaaaatttggatcttcttgaaagacaaattgtgcattctggattctcctatata--ctcaaaccttccctcttttttcacaactcttt 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  25518204 gaaaaataacaacaaaatttggatcttcttgaaagacaaattgtgcattctggattctcctatatatactcaaaccttccctcttttttcacaactcttt 25518303  T
Q  321 gccactcacacttgatttacaacaaaaat------tcaaattcaacaagaatccatgttgatccctcacaaacagaaacaatccatgattgttccaacat 414  Q
    |||||||||||||  ||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25518304 gccactcacacttactttacaacaaaaattcaaattcaaattcaacaagaatccatgttgatccctcacaaacagaaacaatccatgattattccaacat 25518403  T
Q  415 catcaatgcttgatcatcatcacactcacaacaactctgtcaaacgccgttcaccatcatcatcttctgctcaccaaccatcatccaagaagcattcttt 514  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25518404 catcaatgcttggtcatcatcacactcacaacaactctgtcaaacgccgttcaccatcatcatcttctcctcaccaaccatcatccaagaagcattcttt 25518503  T
Q  515 cgacgcaagcaatgtcacccgtaatggcttctccgccatcacacttcctttcagtctccgtggtaatgctcttcgccgctatgtc 599  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| ||||    
T  25518504 cgacgcaagcaatctcacccgtaatggcttctccgccattacacttcctttcagtcttcgtggtaatgctcttcgctgctgtgtc 25518588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 193; Significance: 1e-104; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 354 - 608
Target Start/End: Complemental strand, 27521573 - 27521322
Alignment:
Q  354 attcaacaagaatccatgttgatccctcacaaacagaaacaatccatgattgttccaacatcatcaatgcttgatcatcatcacactcacaacaactctg 453  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||||    
T  27521573 attcaacaagaatccatgttgatccctcacaaacagaaacaatccatgattattccaacatcatcaatgctt---catcatcacactcacaacaactctg 27521477  T
Q  454 tcaaacgccgttcaccatcatcatcttctgctcaccaaccatcatccaagaagcattctttcgacgcaagcaatgtcacccgtaatggcttctccgccat 553  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||    
T  27521476 tcaaacgccgttcaccatcatcatcatctgcccaccaaccatcatccaagaagcattcttttgacgcaagcaatctcacccgtaatggcttctctgccat 27521377  T
Q  554 cacacttcctttcagtctccgtggtaatgctcttcgccgctatgtctctgctcct 608  Q
     |||||||||||||||||||| || ||||||||| |||||| |||||||| ||||    
T  27521376 tacacttcctttcagtctccgcgggaatgctcttagccgctgtgtctctgatcct 27521322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 354 - 603
Target Start/End: Original strand, 27461862 - 27462108
Alignment:
Q  354 attcaacaagaatccatgttgatccctcacaaacagaaacaatccatgattgttccaacatcatcaatgcttgatcatcatcacactcacaacaactctg 453  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   ||||||||||||||||||||| |||    
T  27461862 attcaacaagaatccatgttgatccctcacaaacagaaacaatccatgattattccaacatcatcaatgctt---catcatcacactcacaacaacactg 27461958  T
Q  454 tcaaacgccgttcaccatcatcatcttctgctcaccaaccatcatccaagaagcattctttcgacgcaagcaatgtcacccgtaatggcttctccgccat 553  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||    
T  27461959 tcaaacgccgttcaccatcatcatcatcttatcaccaaccatcatccaagaagcattcttttgacgcaagcaatctcacccgtaatggcttctctgccat 27462058  T
Q  554 cacacttcctttcagtctccgtggtaatgctcttcgccgctatgtctctg 603  Q
     ||||||||||||||||||||||| ||||||||| |||||| ||||||||    
T  27462059 tacacttcctttcagtctccgtggaaatgctcttagccgctgtgtctctg 27462108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 354 - 603
Target Start/End: Original strand, 27482001 - 27482247
Alignment:
Q  354 attcaacaagaatccatgttgatccctcacaaacagaaacaatccatgattgttccaacatcatcaatgcttgatcatcatcacactcacaacaactctg 453  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |   ||||||||||||||||||||| |||    
T  27482001 attcaacaagaatccatgttgatccctcacaaacagaaacaatccatgattattccaacatcatcaatgcct---catcatcacactcacaacaacactg 27482097  T
Q  454 tcaaacgccgttcaccatcatcatcttctgctcaccaaccatcatccaagaagcattctttcgacgcaagcaatgtcacccgtaatggcttctccgccat 553  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||    
T  27482098 tcaaacgccgttcaccatcatcatcatcttatcaccaaccatcatccaagaagcattcttttgacgcaagcaatctcacccgtaatggcttctctgccat 27482197  T
Q  554 cacacttcctttcagtctccgtggtaatgctcttcgccgctatgtctctg 603  Q
     ||| |||||||||||||||| || ||||||||| |||||| ||||||||    
T  27482198 tacaattcctttcagtctccgcgggaatgctcttagccgctgtgtctctg 27482247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 351 - 603
Target Start/End: Original strand, 18985959 - 18986208
Alignment:
Q  351 caaattcaacaagaatccatgttgatccctcacaaacagaaacaatccatgattgttccaacatcatcaatgcttgatcatcatcacactcacaacaact 450  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||   ||||||||| |||||||||||     
T  18985959 caaattcaacaagaatccatggtgatccctcacaaacagaaacaatccatgattattccaacatcatcaatgctt---catcatcaccctcacaacaaca 18986055  T
Q  451 ctgtcaaacgccgttcaccatcatcatcttctgctcaccaaccatcatccaagaagcattctttcgacgcaagcaatgtcacccgtaatggcttctccgc 550  Q
    ||||||||| | |||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  18986056 ctgtcaaactctgttcaccatcatcatcatctgctcaccaaccgtcatccaagaagcattcttttgacgcaagcaatctcacccgtaatggcttctccgc 18986155  T
Q  551 catcacacttcctttcagtctccgtggtaatgctcttcgccgctatgtctctg 603  Q
    ||| |||||| |||||||||||||||| ||| ||||| |||||| ||||||||    
T  18986156 cattacactttctttcagtctccgtgggaatactcttagccgctgtgtctctg 18986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 359
Target Start/End: Original strand, 27461737 - 27461813
Alignment:
Q  283 tatatactcaaaccttccctcttttttcacaactctttgccactcacacttgatttacaacaaaaattcaaattcaa 359  Q
    |||| ||||||||| |||||||||||||| |||||||||||||||||||||  |||||||  ||| |||||||||||    
T  27461737 tatacactcaaaccatccctcttttttcataactctttgccactcacacttactttacaatcaaagttcaaattcaa 27461813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 359
Target Start/End: Original strand, 27481876 - 27481952
Alignment:
Q  283 tatatactcaaaccttccctcttttttcacaactctttgccactcacacttgatttacaacaaaaattcaaattcaa 359  Q
    |||||||||||||| | |||||||||||| |||||||||||||||||||||  |||||||| |||  ||||||||||    
T  27481876 tatatactcaaaccatacctcttttttcataactctttgccactcacacttactttacaaccaaagctcaaattcaa 27481952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 27521671 - 27521614
Alignment:
Q  285 tatactcaaaccttccctcttttttcacaactctttgccactcacacttgatttacaa 342  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||  |||||||    
T  27521671 tatactcaaaccatccctcttttttcataactctttgccactcacacttactttacaa 27521614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 189; Significance: 1e-102; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 354 - 603
Target Start/End: Complemental strand, 29568616 - 29568361
Alignment:
Q  354 attcaacaagaatccatgttgatccctcacaaacagaaacaatccatgattgttccaacatcatcaatgcttgatcatcatca------cactcacaaca 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||      ||||||||| |    
T  29568616 attcaacaagaatccatgttgatccctcacaaacagaaacaatccatgattattccaacatcatcaatgcttcatcatcatcatcatcacactcacaaaa 29568517  T
Q  448 actctgtcaaacgccgttcaccatcatcatcttctgctcaccaaccatcatccaagaagcattctttcgacgcaagcaatgtcacccgtaatggcttctc 547  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29568516 actctttcaaacgccattcaccatcatcatcttctgctcaccaactatcatccaagaagcattctttcgacgcaagcaatctcacccgtaatggcttctc 29568417  T
Q  548 cgccatcacacttcctttcagtctccgtggtaatgctcttcgccgctatgtctctg 603  Q
    |||||| ||||||||||||||||||||||| ||||||||| |||||| ||||||||    
T  29568416 cgccattacacttcctttcagtctccgtgggaatgctcttagccgctgtgtctctg 29568361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 354 - 603
Target Start/End: Original strand, 1758010 - 1758256
Alignment:
Q  354 attcaacaagaatccatgttgatccctcacaaacagaaacaatccatgattgttccaacatcatcaatgcttgatcatcatcacactcacaacaactctg 453  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   ||||||||| ||||||| |||||||    
T  1758010 attcaacaagaatccatgttgatccctcacaaacagaaacaatccatgattattccaacatcatcaatgctt---catcatcactctcacaaaaactctg 1758106  T
Q  454 tcaaacgccgttcaccatcatcatcttctgctcaccaaccatcatccaagaagcattctttcgacgcaagcaatgtcacccgtaatggcttctccgccat 553  Q
    ||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  1758107 tcaaacgccgttcaccatcatcatcatctgctcaccaaccatcactcaagaagcattcttttgacgcaagcaatctcacccgtaatggcttctccgccat 1758206  T
Q  554 cacacttcctttcagtctccgtggtaatgctcttcgccgctatgtctctg 603  Q
     |||||||||||||||||||| || ||||||||| |||||| ||||||||    
T  1758207 tacacttcctttcagtctccgcgggaatgctcttagccgctgtgtctctg 1758256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 381 - 603
Target Start/End: Original strand, 29168141 - 29168363
Alignment:
Q  381 cacaaacagaaacaatccatgattgttccaacatcatcaatgcttgatcatcatcacactcacaacaactctgtcaaacgccgttcaccatcatcatctt 480  Q
    |||||||||||||||  ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29168141 cacaaacagaaacaaagcatgattattccaacatcatcaatgcttcatcatcatcacactcacaacaactctgtcaaacgtcgttcaccatcatcatctt 29168240  T
Q  481 ctgctcaccaaccatcatccaagaagcattctttcgacgcaagcaatgtcacccgtaatggcttctccgccatcacacttcctttcagtctccgtggtaa 580  Q
    |||||||||||| ||||||||| |||||||||||| ||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||| ||    
T  29168241 ctgctcaccaactatcatccaataagcattctttcaacgcaagcaatctcacccgtaatggcttctccaccattacacttcctttcagtctccgtgggaa 29168340  T
Q  581 tgctcttcgccgctatgtctctg 603  Q
    ||||||| || ||| ||||||||    
T  29168341 tgctcttagctgctgtgtctctg 29168363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 354 - 588
Target Start/End: Complemental strand, 29569924 - 29569707
Alignment:
Q  354 attcaacaagaatccatgttgatccctcacaaacagaaacaatccatgattgttccaacatcatcaatgcttgatcatcatcacactcacaacaactctg 453  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||                 |||||||||||||||||    
T  29569924 attcaacaagaatccattttgatccctcacaaacacaaacaatccatgattattccaacatcatca-----------------cactcacaacaactctg 29569842  T
Q  454 tcaaacgccgttcaccatcatcatcttctgctcaccaaccatcatccaagaagcattctttcgacgcaagcaatgtcacccgtaatggcttctccgccat 553  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  29569841 tcaaacgccgttcaccatcatcatcatctgctcaccaactatcatccaagaagcattcttccgacgcaagcaatctcacccgtaatggcttctccgccat 29569742  T
Q  554 cacacttcctttcagtctccgtggtaatgctcttc 588  Q
     ||||||||||||||||||||||| ||||||||||    
T  29569741 tacacttcctttcagtctccgtggcaatgctcttc 29569707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 419 - 588
Target Start/End: Original strand, 27918574 - 27918743
Alignment:
Q  419 aatgcttgatcatcatcacactcacaacaactctgtcaaacgccgttcaccatcatcatcttctgctcaccaaccatcatccaagaagcattctttcgac 518  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||  | |    
T  27918574 aatgcttgatcatcatcacactcacaacaactctgtcaaacgcagttcaccatcatcatcttctgctcaccaactatcatccaagaagcattcttctggc 27918673  T
Q  519 gcaagcaatgtcacccgtaatggcttctccgccatcacacttcctttcagtctccgtggtaatgctcttc 588  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||    
T  27918674 gcaagcaatctcacccgtaatggcttctccgccattacacttcctttcagtctccgtggcaacgctcttc 27918743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 434 - 603
Target Start/End: Original strand, 29425232 - 29425404
Alignment:
Q  434 tcacactcacaacaactctgtcaaacgccgttcacc---atcatcatcttctgctcaccaaccatcatccaagaagcattctttcgacgcaagcaatgtc 530  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  29425232 tcacactcacaacaactctgtcaaacgccgttcaccaccatcatcatcatctgctcaccaaccatcatccaagaagcattcttttgacgcaagcaatctc 29425331  T
Q  531 acccgtaatggcttctccgccatcacacttcctttcagtctccgtggtaatgctcttcgccgctatgtctctg 603  Q
    |  |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| |||||| ||||||||    
T  29425332 atgcgtaatggcttctctgccattacacttcctttcagtctccgtgggaatgctcttagccgctgtgtctctg 29425404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 29166790 - 29166855
Alignment:
Q  283 tatatactcaaaccttccctcttttttcacaactctttgccactcacacttgatttacaacaaaaa 348  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||  |||||||| ||||    
T  29166790 tatatactccaaccttccctcttttttcataactctttgccactcacacttactttacaaccaaaa 29166855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 359
Target Start/End: Original strand, 1757885 - 1757961
Alignment:
Q  283 tatatactcaaaccttccctcttttttcacaactctttgccactcacacttgatttacaacaaaaattcaaattcaa 359  Q
    |||||||||||||| ||||||||| |||| |||||||||| ||||||||||  |||||||| ||| |||||||||||    
T  1757885 tatatactcaaaccatccctctttgttcataactctttgcgactcacacttactttacaaccaaagttcaaattcaa 1757961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 29425113 - 29425177
Alignment:
Q  283 tatatactcaaaccttccctcttttttcacaactctttgccactcacacttgatttacaacaaaaa 348  Q
    |||||| ||||||||||||||||||| || |||||||||||||||||||||  |||||||| ||||    
T  29425113 tatataatcaaaccttccctcttttt-cataactctttgccactcacacttactttacaaccaaaa 29425177  T

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Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 354 - 384
Target Start/End: Original strand, 29425206 - 29425236
Alignment:
Q  354 attcaacaagaatccatgttgatccctcaca 384  Q
    |||||||||||||||||||||||||||||||    
T  29425206 attcaacaagaatccatgttgatccctcaca 29425236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 29568707 - 29568665
Alignment:
Q  317 ctttgccactcacacttgatttacaacaaaaattcaaattcaa 359  Q
    |||||||||||||||||  |||||||| |||||||||||||||    
T  29568707 ctttgccactcacacttactttacaaccaaaattcaaattcaa 29568665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 387
Target Start/End: Original strand, 29166896 - 29166929
Alignment:
Q  354 attcaacaagaatccatgttgatccctcacaaac 387  Q
    |||||||||||||||||| |||||||||||||||    
T  29166896 attcaacaagaatccatgatgatccctcacaaac 29166929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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