View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21079_high_9 (Length: 211)
Name: NF21079_high_9
Description: NF21079
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21079_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 146
Target Start/End: Original strand, 43600745 - 43600876
Alignment:
| Q |
15 |
tcattctttcctttctctactgttgaagtgtataacannnnnnnnngtaattaaaataagcaggcactgcggttgatcaaggaattgcttacttcctcat |
114 |
Q |
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| T |
43600745 |
tcattcttttctttctctactgttgaagtgtataacatttttttttgtaattaaaataatcaggcactgcgtttgatcaaggaattgcttacttcctcat |
43600844 |
T |
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| Q |
115 |
gctggtggctcttctgatcacatatatgttcc |
146 |
Q |
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| T |
43600845 |
gctggtggctcttctgatcacatatatgttcc |
43600876 |
T |
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