View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2107_high_6 (Length: 253)
Name: NF2107_high_6
Description: NF2107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2107_high_6 |
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Alignment Details
Target: chr6 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 34200463 - 34200219
Alignment:
| Q |
1 |
cttggctttgtctactaattagtgttaccaattctaattcagaccctttcaatttaaattcttcatagattcagtaaccatattttctgtaattatattt |
100 |
Q |
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| T |
34200463 |
cttggctttgtctactaattagtgttaccaattctaattcagaccctttcaatttaaattcttcatagattcagtaaccatattttctgtaattatattt |
34200364 |
T |
|
| Q |
101 |
aacatttatggataagttatgcttataaattttggaggaaaattatttgcagcttctgaaacatcttataaaagataagataatttatgtttcacgtgac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34200363 |
aacatttatggataagttatgcttataaattttggaggaaaattatttgcagcttctgaaacatcttataaaagataagataatttatgtttcacgtgac |
34200264 |
T |
|
| Q |
201 |
atgtttggtttggttactttattaatgtacattagttcatctcac |
245 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
34200263 |
atgtttggtttggttactttattaatgtacattagttcatatcac |
34200219 |
T |
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